format-version: 1.2 subsetdef: encode "Initial set used by ENCODE" subsetdef: phase1 "freeze phase 1.1" subsetdef: update022 "samples present in UPDATE022" ontology: ff-phase1 data-version: 2013-07-17 [Term] id: CL:0000000 name: cell namespace: FANTOM [Term] id: CL:0000003 name: native cell namespace: FANTOM is_a: CL:0000000 ! cell [Term] id: CL:0000005 name: fibroblast neural crest derived namespace: FANTOM is_a: CL:0000057 ! fibroblast intersection_of: CL:0000057 ! fibroblast intersection_of: develops_from CL:0000333 ! migratory neural crest cell relationship: develops_from CL:0000333 ! migratory neural crest cell [Term] id: CL:0000006 name: neuronal receptor cell namespace: FANTOM is_a: CL:0000197 ! receptor cell is_a: CL:0000540 ! neuron [Term] id: CL:0000031 name: neuroblast namespace: FANTOM is_a: CL:0000047 ! neuronal stem cell is_a: CL:0000055 ! non-terminally differentiated cell [Term] id: CL:0000034 name: stem cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000035 name: single fate stem cell namespace: FANTOM is_a: CL:0000723 ! somatic stem cell [Term] id: CL:0000037 name: hematopoietic stem cell namespace: FANTOM is_a: CL:0000048 ! multi fate stem cell is_a: CL:0000988 ! hematopoietic cell relationship: develops_from CL:0000566 ! angioblastic mesenchymal cell [Term] id: CL:0000039 name: germ line cell namespace: FANTOM is_a: CL:0000548 ! animal cell [Term] id: CL:0000047 name: neuronal stem cell namespace: FANTOM is_a: CL:0000048 ! multi fate stem cell intersection_of: CL:0000048 ! multi fate stem cell intersection_of: part_of UBERON:0001017 ! central nervous system relationship: part_of UBERON:0001017 ! central nervous system [Term] id: CL:0000048 name: multi fate stem cell namespace: FANTOM is_a: CL:0000723 ! somatic stem cell [Term] id: CL:0000049 name: common myeloid progenitor namespace: FANTOM is_a: CL:0002032 ! hematopoietic oligopotent progenitor cell [Term] id: CL:0000055 name: non-terminally differentiated cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000056 name: myoblast namespace: FANTOM is_a: CL:0000680 ! muscle precursor cell relationship: develops_from CL:0000355 ! muscle stem cell [Term] id: CL:0000057 name: fibroblast namespace: FANTOM is_a: CL:0002320 ! connective tissue cell relationship: develops_from CL:0000134 ! mesenchymal cell [Term] id: CL:0000062 name: osteoblast namespace: FANTOM is_a: CL:0000055 ! non-terminally differentiated cell is_a: CL:0002320 ! connective tissue cell [Term] id: CL:0000064 name: ciliated cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000066 name: epithelial cell namespace: FANTOM is_a: CL:0000548 ! animal cell [Term] id: CL:0000067 name: ciliated epithelial cell namespace: FANTOM is_a: CL:0000064 ! ciliated cell is_a: CL:0000075 ! columnar/cuboidal epithelial cell [Term] id: CL:0000068 name: duct epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0002371 ! somatic cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0000058 ! duct relationship: part_of UBERON:0000058 ! duct [Term] id: CL:0000071 name: blood vessel endothelial cell namespace: FANTOM is_a: CL:0000076 ! squamous epithelial cell is_a: CL:0002139 ! endothelial cell of vascular tree intersection_of: CL:0000076 ! squamous epithelial cell intersection_of: part_of UBERON:0004638 ! blood vessel endothelium relationship: part_of UBERON:0004638 ! blood vessel endothelium [Term] id: CL:0000075 name: columnar/cuboidal epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0002371 ! somatic cell [Term] id: CL:0000076 name: squamous epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell [Term] id: CL:0000077 name: mesothelial cell namespace: FANTOM is_a: CL:0000076 ! squamous epithelial cell is_a: CL:0000213 ! lining cell relationship: develops_from CL:0000222 ! mesodermal cell [Term] id: CL:0000079 name: stratified epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0002371 ! somatic cell [Term] id: CL:0000081 name: blood cell namespace: FANTOM is_a: CL:0000988 ! hematopoietic cell [Term] id: CL:0000082 name: epithelial cell of lung namespace: FANTOM is_a: CL:0000066 ! epithelial cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0002048 ! lung relationship: part_of UBERON:0000115 ! lung epithelium relationship: part_of UBERON:0002048 ! lung [Term] id: CL:0000083 name: epithelial cell of pancreas namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0002371 ! somatic cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0001264 ! pancreas relationship: part_of UBERON:0001264 ! pancreas [Term] id: CL:0000084 name: T cell namespace: FANTOM is_a: CL:0000542 ! lymphocyte [Term] id: CL:0000092 name: osteoclast namespace: FANTOM is_a: CL:0000766 ! myeloid leukocyte is_a: CL:0001035 ! bone cell relationship: develops_from CL:0000576 ! monocyte relationship: part_of UBERON:0001474 ! bone element [Term] id: CL:0000094 name: granulocyte namespace: FANTOM is_a: CL:0000081 ! blood cell is_a: CL:0000766 ! myeloid leukocyte [Term] id: CL:0000095 name: neuron associated cell namespace: FANTOM is_a: CL:0002319 ! neural cell [Term] id: CL:0000097 name: mast cell namespace: FANTOM is_a: CL:0000766 ! myeloid leukocyte is_a: CL:0002274 ! histamine secreting cell [Term] id: CL:0000098 name: sensory epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0000197 ! receptor cell is_a: CL:0002371 ! somatic cell [Term] id: CL:0000115 name: endothelial cell namespace: FANTOM is_a: CL:0000213 ! lining cell is_a: CL:0002078 ! meso-epithelial cell [Term] id: CL:0000117 name: CNS neuron (sensu Vertebrata) namespace: FANTOM is_a: CL:0000540 ! neuron [Term] id: CL:0000120 name: granule cell namespace: FANTOM is_a: CL:0000117 ! CNS neuron (sensu Vertebrata) [Term] id: CL:0000123 name: neuron associated cell (sensu Vertebrata) namespace: FANTOM is_a: CL:0000095 ! neuron associated cell relationship: develops_from CL:0000333 ! migratory neural crest cell [Term] id: CL:0000125 name: glial cell namespace: FANTOM is_a: CL:0000095 ! neuron associated cell [Term] id: CL:0000126 name: macroglial cell namespace: FANTOM is_a: CL:0000243 ! glial cell (sensu Vertebrata) [Term] id: CL:0000127 name: astrocyte namespace: FANTOM is_a: CL:0000126 ! macroglial cell [Term] id: CL:0000128 name: oligodendrocyte namespace: FANTOM is_a: CL:0000126 ! macroglial cell intersection_of: CL:0000126 ! macroglial cell intersection_of: part_of UBERON:0001017 ! central nervous system relationship: develops_from CL:0002453 ! oligodendrocyte precursor cell relationship: part_of UBERON:0001017 ! central nervous system [Term] id: CL:0000129 name: microglial cell namespace: FANTOM is_a: CL:0000243 ! glial cell (sensu Vertebrata) is_a: CL:0000878 ! central nervous system macrophage relationship: develops_from CL:0002453 ! oligodendrocyte precursor cell relationship: part_of UBERON:0001017 ! central nervous system [Term] id: CL:0000134 name: mesenchymal cell namespace: FANTOM is_a: CL:0000048 ! multi fate stem cell is_a: CL:0000219 ! motile cell is_a: CL:0002320 ! connective tissue cell [Term] id: CL:0000135 name: fibrocyte namespace: FANTOM is_a: CL:0000499 ! stromal cell relationship: develops_from CL:0000057 ! fibroblast [Term] id: CL:0000136 name: fat cell namespace: FANTOM is_a: CL:0000325 ! stuff accumulating cell is_a: CL:0002320 ! connective tissue cell relationship: develops_from CL:0000134 ! mesenchymal cell [Term] id: CL:0000138 name: chondrocyte namespace: FANTOM is_a: CL:0000153 ! GAG secreting cell is_a: CL:0000667 ! collagen secreting cell [Term] id: CL:0000147 name: pigment cell namespace: FANTOM is_a: CL:0000325 ! stuff accumulating cell [Term] id: CL:0000148 name: melanocyte namespace: FANTOM is_a: CL:0000147 ! pigment cell is_a: CL:0000710 ! neurecto-epithelial cell [Term] id: CL:0000149 name: visual pigment cell namespace: FANTOM is_a: CL:0000147 ! pigment cell [Term] id: CL:0000150 name: glandular epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0000151 ! secretory cell is_a: CL:0002371 ! somatic cell [Term] id: CL:0000151 name: secretory cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000153 name: GAG secreting cell namespace: FANTOM is_a: CL:0000327 ! extracellular matrix secreting cell is_a: CL:0000447 ! carbohydrate secreting cell [Term] id: CL:0000154 name: protein secreting cell namespace: FANTOM is_a: CL:0000151 ! secretory cell [Term] id: CL:0000159 name: seromucus secreting cell namespace: FANTOM is_a: CL:0000151 ! secretory cell [Term] id: CL:0000163 name: endocrine cell namespace: FANTOM is_a: CL:0000151 ! secretory cell [Term] id: CL:0000164 name: enteroendocrine cell namespace: FANTOM is_a: CL:0000150 ! glandular epithelial cell is_a: CL:0000163 ! endocrine cell [Term] id: CL:0000167 name: peptide hormone secreting cell namespace: FANTOM is_a: CL:0000163 ! endocrine cell [Term] id: CL:0000172 name: somatostatin secreting cell namespace: FANTOM is_a: CL:0000167 ! peptide hormone secreting cell [Term] id: CL:0000173 name: pancreatic D cell namespace: FANTOM is_a: CL:0000083 ! epithelial cell of pancreas is_a: CL:0000502 ! type D enteroendocrine cell intersection_of: CL:0000502 ! type D enteroendocrine cell intersection_of: part_of UBERON:0001264 ! pancreas relationship: part_of UBERON:0000006 ! islet of Langerhans relationship: part_of UBERON:0001264 ! pancreas [Term] id: CL:0000174 name: steroid hormone secreting cell namespace: FANTOM is_a: CL:0000163 ! endocrine cell [Term] id: CL:0000181 name: metabolising cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000182 name: hepatocyte namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0000181 ! metabolising cell is_a: CL:0000417 ! endopolyploid cell is_a: CL:0002371 ! somatic cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0002107 ! liver relationship: develops_from CL:0000134 ! mesenchymal cell relationship: part_of UBERON:0002107 ! liver [Term] id: CL:0000183 name: contractile cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000186 name: myofibroblast cell namespace: FANTOM is_a: CL:0000183 ! contractile cell is_a: CL:0000548 ! animal cell is_a: CL:0002371 ! somatic cell [Term] id: CL:0000187 name: muscle cell namespace: FANTOM is_a: CL:0000183 ! contractile cell is_a: CL:0000393 ! electrically responsive cell is_a: CL:0000548 ! animal cell is_a: CL:0002371 ! somatic cell relationship: develops_from CL:0000056 ! myoblast [Term] id: CL:0000188 name: skeletal muscle cell namespace: FANTOM is_a: CL:0000187 ! muscle cell intersection_of: CL:0000187 ! muscle cell intersection_of: part_of UBERON:0001134 ! skeletal muscle tissue relationship: part_of UBERON:0001134 ! skeletal muscle tissue [Term] id: CL:0000192 name: smooth muscle cell namespace: FANTOM is_a: CL:0000187 ! muscle cell [Term] id: CL:0000197 name: receptor cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000199 name: mechanoreceptor cell namespace: FANTOM is_a: CL:0000006 ! neuronal receptor cell [Term] id: CL:0000202 name: auditory hair cell namespace: FANTOM is_a: CL:0000068 ! duct epithelial cell is_a: CL:0001035 ! bone cell is_a: CL:0002374 ! ear hair cell is_a: CL:0002491 ! auditory epithelial cell relationship: part_of UBERON:0002227 ! spiral organ of cochlea [Term] id: CL:0000211 name: electrically active cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000212 name: absorptive cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000213 name: lining cell namespace: FANTOM is_a: CL:0000215 ! barrier cell [Term] id: CL:0000214 name: synovial cell namespace: FANTOM is_a: CL:0000153 ! GAG secreting cell is_a: CL:0000213 ! lining cell is_a: CL:0002078 ! meso-epithelial cell intersection_of: CL:0002078 ! meso-epithelial cell intersection_of: part_of UBERON:0002018 ! synovial membrane of synovial joint relationship: part_of UBERON:0002018 ! synovial membrane of synovial joint [Term] id: CL:0000215 name: barrier cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000216 name: Sertoli cell namespace: FANTOM is_a: CL:0000511 ! androgen binding protein secreting cell is_a: CL:0000630 ! supportive cell is_a: CL:0002625 ! seminiferous tubule epithelial cell intersection_of: CL:0000630 ! supportive cell intersection_of: part_of UBERON:0001343 ! seminiferous tubule of testis relationship: part_of UBERON:0001343 ! seminiferous tubule of testis [Term] id: CL:0000219 name: motile cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000222 name: mesodermal cell namespace: FANTOM is_a: CL:0002321 ! embryonic cell relationship: part_of UBERON:0000926 ! mesoderm [Term] id: CL:0000226 name: single nucleate cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000228 name: multinucleate cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000234 name: phagocyte namespace: FANTOM is_a: CL:0000219 ! motile cell is_a: CL:0000325 ! stuff accumulating cell is_a: CL:0000473 ! defensive cell [Term] id: CL:0000235 name: macrophage namespace: FANTOM is_a: CL:0000234 ! phagocyte is_a: CL:0000766 ! myeloid leukocyte relationship: develops_from CL:0000576 ! monocyte [Term] id: CL:0000236 name: B cell namespace: FANTOM is_a: CL:0000945 ! lymphocyte of B lineage [Term] id: CL:0000237 name: keratinizing barrier epithelial cell namespace: FANTOM is_a: CL:0000240 ! stratified squamous epithelial cell is_a: CL:0000311 ! keratin accumulating cell [Term] id: CL:0000239 name: brush border epithelial cell namespace: FANTOM is_a: CL:0000075 ! columnar/cuboidal epithelial cell [Term] id: CL:0000240 name: stratified squamous epithelial cell namespace: FANTOM is_a: CL:0000076 ! squamous epithelial cell is_a: CL:0000079 ! stratified epithelial cell [Term] id: CL:0000242 name: Merkel cell namespace: FANTOM is_a: CL:0000123 ! neuron associated cell (sensu Vertebrata) is_a: CL:0000312 ! keratinocyte [Term] id: CL:0000243 name: glial cell (sensu Vertebrata) namespace: FANTOM is_a: CL:0000125 ! glial cell [Term] id: CL:0000244 name: transitional epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0002371 ! somatic cell [Term] id: CL:0000255 name: eukaryotic cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000306 name: crystallin accumulating cell namespace: FANTOM is_a: CL:0000325 ! stuff accumulating cell [Term] id: CL:0000307 name: tracheal epithelial cell namespace: FANTOM is_a: CL:0002202 ! epithelial cell of tracheobronchial tree intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0003126 ! trachea relationship: part_of UBERON:0003126 ! trachea [Term] id: CL:0000311 name: keratin accumulating cell namespace: FANTOM is_a: CL:0000325 ! stuff accumulating cell [Term] id: CL:0000312 name: keratinocyte namespace: FANTOM is_a: CL:0000237 ! keratinizing barrier epithelial cell is_a: CL:0000362 ! epidermal cell relationship: part_of UBERON:0001003 ! epidermis [Term] id: CL:0000313 name: serous secreting cell namespace: FANTOM is_a: CL:0000159 ! seromucus secreting cell [Term] id: CL:0000317 name: sebum secreting cell namespace: FANTOM is_a: CL:0000151 ! secretory cell intersection_of: CL:0000151 ! secretory cell intersection_of: part_of UBERON:0001821 ! sebaceous gland relationship: part_of UBERON:0001821 ! sebaceous gland [Term] id: CL:0000319 name: mucus secreting cell namespace: FANTOM is_a: CL:0000159 ! seromucus secreting cell [Term] id: CL:0000322 name: pneumocyte namespace: FANTOM is_a: CL:0010003 ! epithelial cell of alveolus of lung relationship: part_of UBERON:0004821 ! pulmonary alveolus epithelium [Term] id: CL:0000325 name: stuff accumulating cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000327 name: extracellular matrix secreting cell namespace: FANTOM is_a: CL:0000151 ! secretory cell is_a: CL:0000499 ! stromal cell [Term] id: CL:0000333 name: migratory neural crest cell namespace: FANTOM is_a: CL:0000219 ! motile cell is_a: CL:0002321 ! embryonic cell [Term] id: CL:0000342 name: pigment cell (sensu Vertebrata) namespace: FANTOM is_a: CL:0000147 ! pigment cell [Term] id: CL:0000346 name: hair follicle dermal papilla cell namespace: FANTOM is_a: CL:0000134 ! mesenchymal cell is_a: EFO:0000324 ! cell type intersection_of: CL:0000134 ! mesenchymal cell intersection_of: part_of UBERON:0000412 ! dermal papilla relationship: develops_from CL:0000333 ! migratory neural crest cell relationship: part_of UBERON:0000412 ! dermal papilla [Term] id: CL:0000349 name: extraembryonic cell namespace: FANTOM is_a: CL:0000548 ! animal cell is_a: CL:0002371 ! somatic cell intersection_of: CL:0000548 ! animal cell intersection_of: part_of UBERON:0000478 ! extraembryonic structure relationship: part_of UBERON:0000478 ! extraembryonic structure [Term] id: CL:0000351 name: trophoblast cell namespace: FANTOM is_a: CL:0000349 ! extraembryonic cell intersection_of: CL:0000349 ! extraembryonic cell intersection_of: part_of UBERON:0000358 ! blastocyst relationship: part_of UBERON:0000358 ! blastocyst [Term] id: CL:0000355 name: muscle stem cell namespace: FANTOM is_a: CL:0000048 ! multi fate stem cell intersection_of: CL:0000048 ! multi fate stem cell intersection_of: part_of UBERON:0001134 ! skeletal muscle tissue relationship: part_of UBERON:0001134 ! skeletal muscle tissue [Term] id: CL:0000359 name: vascular associated smooth muscle cell namespace: FANTOM is_a: CL:0000192 ! smooth muscle cell intersection_of: CL:0000192 ! smooth muscle cell intersection_of: part_of UBERON:0002049 ! vasculature relationship: part_of UBERON:0002049 ! vasculature [Term] id: CL:0000362 name: epidermal cell namespace: FANTOM is_a: CL:0002159 ! general ecto-epithelial cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0001003 ! epidermis relationship: part_of UBERON:0001003 ! epidermis [Term] id: CL:0000386 name: attachment cell namespace: FANTOM is_a: CL:0000630 ! supportive cell [Term] id: CL:0000388 name: tendon cell namespace: FANTOM is_a: CL:0000135 ! fibrocyte is_a: CL:0000386 ! attachment cell intersection_of: CL:0000135 ! fibrocyte intersection_of: part_of UBERON:0000043 ! tendon relationship: part_of UBERON:0000043 ! tendon [Term] id: CL:0000393 name: electrically responsive cell namespace: FANTOM is_a: CL:0000211 ! electrically active cell [Term] id: CL:0000404 name: electrically signaling cell namespace: FANTOM is_a: CL:0000211 ! electrically active cell [Term] id: CL:0000412 name: polyploid cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000417 name: endopolyploid cell namespace: FANTOM is_a: CL:0000412 ! polyploid cell [Term] id: CL:0000447 name: carbohydrate secreting cell namespace: FANTOM is_a: CL:0000151 ! secretory cell [Term] id: CL:0000451 name: dendritic cell namespace: FANTOM is_a: CL:0000738 ! leukocyte [Term] id: CL:0000453 name: Langerhans cell namespace: FANTOM is_a: CL:0000766 ! myeloid leukocyte is_a: CL:0000990 ! conventional dendritic cell relationship: develops_from CL:0000763 ! myeloid cell [Term] id: CL:0000457 name: biogenic amine secreting cell namespace: FANTOM is_a: CL:0000163 ! endocrine cell [Term] id: CL:0000473 name: defensive cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000499 name: stromal cell namespace: FANTOM is_a: CL:0002320 ! connective tissue cell relationship: develops_from CL:0000134 ! mesenchymal cell [Term] id: CL:0000501 name: granulosa cell namespace: FANTOM is_a: CL:0000174 ! steroid hormone secreting cell is_a: CL:0002174 ! follicular cell of ovary [Term] id: CL:0000502 name: type D enteroendocrine cell namespace: FANTOM is_a: CL:0000164 ! enteroendocrine cell is_a: CL:0000172 ! somatostatin secreting cell [Term] id: CL:0000511 name: androgen binding protein secreting cell namespace: FANTOM is_a: CL:0000154 ! protein secreting cell [Term] id: CL:0000515 name: skeletal muscle myoblast namespace: FANTOM is_a: CL:0000056 ! myoblast is_a: CL_0000056 ! myoblast intersection_of: CL:0000056 ! myoblast intersection_of: part_of UBERON:0001134 ! skeletal muscle tissue relationship: part_of UBERON:0001134 ! skeletal muscle tissue [Term] id: CL:0000540 name: neuron namespace: FANTOM is_a: CL:0000393 ! electrically responsive cell is_a: CL:0000404 ! electrically signaling cell is_a: CL:0002319 ! neural cell relationship: develops_from CL:0000031 ! neuroblast [Term] id: CL:0000542 name: lymphocyte namespace: FANTOM is_a: CL:0002087 ! nongranular leukocyte is_a: CL:0002242 ! nucleate cell [Term] id: CL:0000548 name: animal cell namespace: FANTOM is_a: CL:0000255 ! eukaryotic cell [Term] id: CL:0000556 name: megakaryocyte namespace: FANTOM is_a: CL:0000763 ! myeloid cell is_a: CL:1001610 ! bone marrow hematopoietic cell relationship: part_of UBERON:0002371 ! bone marrow [Term] id: CL:0000557 name: granulocyte monocyte progenitor cell namespace: FANTOM is_a: CL:0000763 ! myeloid cell is_a: CL:0002032 ! hematopoietic oligopotent progenitor cell is_a: CL:1001610 ! bone marrow hematopoietic cell relationship: develops_from CL:0000049 ! common myeloid progenitor relationship: part_of UBERON:0002371 ! bone marrow [Term] id: CL:0000558 name: reticulocyte namespace: FANTOM is_a: CL:0000764 ! erythroid lineage cell [Term] id: CL:0000566 name: angioblastic mesenchymal cell namespace: FANTOM is_a: CL:0000134 ! mesenchymal cell relationship: develops_from CL:0000134 ! mesenchymal cell [Term] id: CL:0000569 name: cardiac mesenchymal cell namespace: FANTOM is_a: CL:0000134 ! mesenchymal cell is_a: CL:0002494 ! cardiocyte intersection_of: CL:0000134 ! mesenchymal cell intersection_of: part_of UBERON:0000948 ! heart relationship: part_of UBERON:0000948 ! heart [Term] id: CL:0000575 name: corneal epithelial cell namespace: FANTOM is_a: CL:0000076 ! squamous epithelial cell is_a: CL:0002159 ! general ecto-epithelial cell intersection_of: CL:0000076 ! squamous epithelial cell intersection_of: part_of UBERON:0000964 ! cornea relationship: part_of UBERON:0000964 ! cornea [Term] id: CL:0000576 name: monocyte namespace: FANTOM is_a: CL:0000766 ! myeloid leukocyte is_a: CL:0002087 ! nongranular leukocyte [Term] id: CL:0000584 name: enterocyte namespace: FANTOM is_a: CL:0000239 ! brush border epithelial cell is_a: CL:0000677 ! gut absorptive cell is_a: CL:0002563 ! intestinal epithelial cell [Term] id: CL:0000586 name: germ cell namespace: FANTOM is_a: CL:0000039 ! germ line cell [Term] id: CL:0000589 name: cochlear inner hair cell namespace: FANTOM is_a: CL:0000202 ! auditory hair cell [Term] id: CL:0000594 name: skeletal muscle satellite cell namespace: FANTOM is_a: CL:0000035 ! single fate stem cell is_a: CL:0000188 ! skeletal muscle cell is_a: CL:0000680 ! muscle precursor cell [Term] id: CL:0000622 name: acinar cell namespace: FANTOM is_a: CL:0000150 ! glandular epithelial cell is_a: CL:0000154 ! protein secreting cell relationship: part_of UBERON:0009842 ! acinus [Term] id: CL:0000623 name: natural killer cell namespace: FANTOM is_a: CL:0000542 ! lymphocyte [Term] id: CL:0000624 name: CD4-positive, alpha-beta T cell namespace: FANTOM is_a: CL:0000791 ! mature alpha-beta T cell [Term] id: CL:0000625 name: CD8-positive, alpha-beta T cell namespace: FANTOM is_a: CL:0000791 ! mature alpha-beta T cell [Term] id: CL:0000627 name: transporting cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000630 name: supportive cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0000632 name: hepatic stellate cell namespace: FANTOM is_a: CL:0000057 ! fibroblast is_a: CL:0000327 ! extracellular matrix secreting cell relationship: part_of UBERON:0002107 ! liver [Term] id: CL:0000650 name: mesangial cell namespace: FANTOM is_a: CL:0000669 ! pericyte cell relationship: develops_from CL:0000134 ! mesenchymal cell [Term] id: CL:0000666 name: fenestrated cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0002371 ! somatic cell [Term] id: CL:0000667 name: collagen secreting cell namespace: FANTOM is_a: CL:0000327 ! extracellular matrix secreting cell [Term] id: CL:0000669 name: pericyte cell namespace: FANTOM is_a: CL:0000183 ! contractile cell is_a: CL:0000630 ! supportive cell is_a: CL:0002320 ! connective tissue cell [Term] id: CL:0000677 name: gut absorptive cell namespace: FANTOM is_a: CL:0000212 ! absorptive cell [Term] id: CL:0000680 name: muscle precursor cell namespace: FANTOM is_a: CL:0000055 ! non-terminally differentiated cell is_a: CL:0002371 ! somatic cell relationship: develops_from CL:0000222 ! mesodermal cell [Term] id: CL:0000682 name: M cell of gut namespace: FANTOM is_a: CL:0000473 ! defensive cell is_a: CL:0000627 ! transporting cell is_a: CL:0002251 ! epithelial cell of alimentary canal relationship: part_of UBERON:0003929 ! gut epithelium [Term] id: CL:0000708 name: leptomeningeal cell namespace: FANTOM is_a: CL:0000327 ! extracellular matrix secreting cell intersection_of: CL:0000327 ! extracellular matrix secreting cell intersection_of: part_of UBERON:0003210 ! blood-cerebrospinal fluid barrier relationship: part_of UBERON:0003210 ! blood-cerebrospinal fluid barrier [Term] id: CL:0000710 name: neurecto-epithelial cell namespace: FANTOM is_a: CL:0000075 ! columnar/cuboidal epithelial cell is_a: CL:0002077 ! ecto-epithelial cell [Term] id: CL:0000723 name: somatic stem cell namespace: FANTOM is_a: CL:0000034 ! stem cell is_a: CL:0002371 ! somatic cell [Term] id: CL:0000731 name: urothelial cell namespace: FANTOM is_a: CL:0000244 ! transitional epithelial cell intersection_of: CL:0000244 ! transitional epithelial cell intersection_of: part_of UBERON:0000365 ! urothelium relationship: part_of UBERON:0000365 ! urothelium [Term] id: CL:0000737 name: striated muscle cell namespace: FANTOM is_a: CL:0000187 ! muscle cell [Term] id: CL:0000738 name: leukocyte namespace: FANTOM is_a: CL:0000219 ! motile cell is_a: CL:0000988 ! hematopoietic cell relationship: develops_from CL:0000037 ! hematopoietic stem cell [Term] id: CL:0000746 name: cardiac muscle cell namespace: FANTOM is_a: CL:0000737 ! striated muscle cell is_a: CL:0002494 ! cardiocyte intersection_of: CL:0000737 ! striated muscle cell intersection_of: part_of UBERON:0007100 ! circulatory organ relationship: part_of UBERON:0007100 ! circulatory organ [Term] id: CL:0000763 name: myeloid cell namespace: FANTOM is_a: CL:0000988 ! hematopoietic cell intersection_of: CL:0000988 ! hematopoietic cell intersection_of: develops_from CL:0000049 ! common myeloid progenitor relationship: develops_from CL:0000049 ! common myeloid progenitor [Term] id: CL:0000764 name: erythroid lineage cell namespace: FANTOM is_a: CL:0000763 ! myeloid cell [Term] id: CL:0000765 name: erythroblast namespace: FANTOM is_a: CL:0000764 ! erythroid lineage cell is_a: CL:0002242 ! nucleate cell [Term] id: CL:0000766 name: myeloid leukocyte namespace: FANTOM is_a: CL:0000738 ! leukocyte is_a: CL:0000763 ! myeloid cell intersection_of: CL:0000738 ! leukocyte intersection_of: develops_from CL:0000049 ! common myeloid progenitor relationship: develops_from CL:0000049 ! common myeloid progenitor [Term] id: CL:0000767 name: basophil namespace: FANTOM is_a: CL:0000094 ! granulocyte [Term] id: CL:0000771 name: eosinophil namespace: FANTOM is_a: CL:0000094 ! granulocyte [Term] id: CL:0000775 name: neutrophil namespace: FANTOM is_a: CL:0000094 ! granulocyte [Term] id: CL:0000784 name: plasmacytoid dendritic cell namespace: FANTOM is_a: CL:0000451 ! dendritic cell relationship: develops_from CL:0000037 ! hematopoietic stem cell [Term] id: CL:0000785 name: mature B cell namespace: FANTOM is_a: CL:0000236 ! B cell [Term] id: CL:0000786 name: plasma cell namespace: FANTOM is_a: CL:0000946 ! antibody secreting cell [Term] id: CL:0000789 name: alpha-beta T cell namespace: FANTOM is_a: CL:0000084 ! T cell [Term] id: CL:0000791 name: mature alpha-beta T cell namespace: FANTOM is_a: CL:0000789 ! alpha-beta T cell is_a: CL:0002419 ! mature T cell [Term] id: CL:0000792 name: CD4-positive, CD25-positive, alpha-beta regulatory T cell namespace: FANTOM is_a: CL:0000624 ! CD4-positive, alpha-beta T cell is_a: CL:0000815 ! regulatory T cell [Term] id: CL:0000814 name: mature NK T cell namespace: FANTOM is_a: CL:0000791 ! mature alpha-beta T cell is_a: CL:0002127 ! innate effector T cell [Term] id: CL:0000815 name: regulatory T cell namespace: FANTOM is_a: CL:0002419 ! mature T cell [Term] id: CL:0000817 name: precursor B cell namespace: FANTOM is_a: CL:0000236 ! B cell [Term] id: CL:0000819 name: B-1 B cell namespace: FANTOM is_a: CL:0000785 ! mature B cell [Term] id: CL:0000836 name: promyelocyte namespace: FANTOM is_a: CL:0000763 ! myeloid cell is_a: CL:0002191 ! granulocytopoietic cell is_a: CL:0002242 ! nucleate cell [Term] id: CL:0000839 name: myeloid lineage restricted progenitor cell namespace: FANTOM is_a: CL:0002031 ! hematopoietic lineage restricted progenitor cell [Term] id: CL:0000840 name: immature conventional dendritic cell namespace: FANTOM is_a: CL:0000766 ! myeloid leukocyte is_a: CL:0000990 ! conventional dendritic cell [Term] id: CL:0000842 name: mononuclear cell namespace: FANTOM is_a: CL:0000226 ! single nucleate cell is_a: CL:0002087 ! nongranular leukocyte [Term] id: CL:0000855 name: sensory hair cell namespace: FANTOM is_a: CL:0000199 ! mechanoreceptor cell [Term] id: CL:0000860 name: classical monocyte namespace: FANTOM is_a: CL:0000234 ! phagocyte is_a: CL:0000576 ! monocyte [Term] id: CL:0000864 name: tissue-resident macrophage namespace: FANTOM is_a: CL:0000235 ! macrophage intersection_of: CL:0000235 ! macrophage intersection_of: part_of UBERON:0000479 ! tissue relationship: part_of UBERON:0000479 ! tissue [Term] id: CL:0000878 name: central nervous system macrophage namespace: FANTOM is_a: CL:0000864 ! tissue-resident macrophage intersection_of: CL:0000864 ! tissue-resident macrophage intersection_of: part_of UBERON:0001017 ! central nervous system relationship: part_of UBERON:0001017 ! central nervous system [Term] id: CL:0000895 name: naive thymus-derived CD4-positive, alpha-beta T cell namespace: FANTOM is_a: CL:0000624 ! CD4-positive, alpha-beta T cell is_a: CL:0000898 ! naive T cell [Term] id: CL:0000898 name: naive T cell namespace: FANTOM is_a: CL:0002419 ! mature T cell [Term] id: CL:0000911 name: effector T cell namespace: FANTOM is_a: CL:0002419 ! mature T cell [Term] id: CL:0000945 name: lymphocyte of B lineage namespace: FANTOM is_a: CL:0000542 ! lymphocyte [Term] id: CL:0000946 name: antibody secreting cell namespace: FANTOM is_a: CL:0000945 ! lymphocyte of B lineage [Term] id: CL:0000988 name: hematopoietic cell namespace: FANTOM is_a: CL:0000548 ! animal cell is_a: CL:0002371 ! somatic cell [Term] id: CL:0000990 name: conventional dendritic cell namespace: FANTOM is_a: CL:0000451 ! dendritic cell [Term] id: CL:0001014 name: CD1a-positive Langerhans cell namespace: FANTOM is_a: CL:0000453 ! Langerhans cell [Term] id: CL:0001016 name: immature CD1a-positive Langerhans cell namespace: FANTOM is_a: CL:0000840 ! immature conventional dendritic cell is_a: CL:0001014 ! CD1a-positive Langerhans cell [Term] id: CL:0001024 name: CD34-positive, CD38-negative hematopoietic stem cell namespace: FANTOM is_a: CL:0000037 ! hematopoietic stem cell [Term] id: CL:0001035 name: bone cell namespace: FANTOM is_a: CL:0000548 ! animal cell intersection_of: CL:0000548 ! animal cell intersection_of: part_of UBERON:0001474 ! bone element relationship: part_of UBERON:0001474 ! bone element [Term] id: CL:0002027 name: CD9-positive, CD41-positive megakaryocyte cell namespace: FANTOM is_a: CL:0000556 ! megakaryocyte [Term] id: CL:0002031 name: hematopoietic lineage restricted progenitor cell namespace: FANTOM is_a: CL:0000988 ! hematopoietic cell relationship: develops_from CL:0002032 ! hematopoietic oligopotent progenitor cell [Term] id: CL:0002032 name: hematopoietic oligopotent progenitor cell namespace: FANTOM is_a: CL:0000988 ! hematopoietic cell [Term] id: CL:0002057 name: CD14-positive, CD16-negative classical monocyte namespace: FANTOM is_a: CL:0000860 ! classical monocyte [Term] id: CL:0002076 name: endo-epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0002371 ! somatic cell [Term] id: CL:0002077 name: ecto-epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0002371 ! somatic cell [Term] id: CL:0002078 name: meso-epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0002371 ! somatic cell relationship: develops_from CL:0000222 ! mesodermal cell [Term] id: CL:0002087 name: nongranular leukocyte namespace: FANTOM is_a: CL:0000738 ! leukocyte [Term] id: CL:0002092 name: bone marrow cell namespace: FANTOM is_a: CL:0001035 ! bone cell intersection_of: CL:0001035 ! bone cell intersection_of: part_of UBERON:0002371 ! bone marrow relationship: part_of UBERON:0002371 ! bone marrow [Term] id: CL:0002127 name: innate effector T cell namespace: FANTOM is_a: CL:0000911 ! effector T cell [Term] id: CL:0002138 name: endothelial cell of lymphatic vessel namespace: FANTOM is_a: CL:0002139 ! endothelial cell of vascular tree relationship: part_of UBERON:0001473 ! lymphatic vessel [Term] id: CL:0002139 name: endothelial cell of vascular tree namespace: FANTOM is_a: CL:0000115 ! endothelial cell [Term] id: CL:0002140 name: acinar cell of sebaceous gland namespace: FANTOM is_a: CL:0000317 ! sebum secreting cell is_a: CL:0000622 ! acinar cell is_a: CL:1000448 ! epithelial cell of sweat gland intersection_of: CL:0000317 ! sebum secreting cell intersection_of: part_of UBERON:0003487 ! skin sebaceous gland relationship: part_of UBERON:0003487 ! skin sebaceous gland [Term] id: CL:0002144 name: capillary endothelial cell namespace: FANTOM is_a: CL:0000071 ! blood vessel endothelial cell intersection_of: CL:0000071 ! blood vessel endothelial cell intersection_of: part_of UBERON:0001915 ! endothelium of capillary relationship: part_of UBERON:0001915 ! endothelium of capillary [Term] id: CL:0002149 name: epithelial cell of uterus namespace: FANTOM is_a: CL:0002076 ! endo-epithelial cell intersection_of: CL:0002076 ! endo-epithelial cell intersection_of: part_of UBERON:0000995 ! uterus relationship: part_of UBERON:0000995 ! uterus [Term] id: CL:0002159 name: general ecto-epithelial cell namespace: FANTOM is_a: CL:0002077 ! ecto-epithelial cell [Term] id: CL:0002166 name: epithelial cell of Malassez namespace: FANTOM is_a: CL:0002159 ! general ecto-epithelial cell is_a: CL:0002251 ! epithelial cell of alimentary canal relationship: part_of UBERON:0011595 ! jaw region [Term] id: CL:0002167 name: olfactory epithelial cell namespace: FANTOM is_a: CL:0000098 ! sensory epithelial cell is_a: CL:0000710 ! neurecto-epithelial cell [Term] id: CL:0002170 name: keratinized cell of the oral mucosa namespace: FANTOM is_a: CL:0000237 ! keratinizing barrier epithelial cell is_a: CL:0002251 ! epithelial cell of alimentary canal is_a: CL:0002336 ! buccal mucosa cell intersection_of: CL:0000237 ! keratinizing barrier epithelial cell intersection_of: part_of UBERON:0003729 ! mouth mucosa relationship: part_of UBERON:0003729 ! mouth mucosa [Term] id: CL:0002174 name: follicular cell of ovary namespace: FANTOM is_a: CL:0002078 ! meso-epithelial cell [Term] id: CL:0002178 name: epithelial cell of stomach namespace: FANTOM is_a: CL:0002251 ! epithelial cell of alimentary canal intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0000945 ! stomach relationship: part_of UBERON:0000945 ! stomach [Term] id: CL:0002188 name: glomerular endothelial cell namespace: FANTOM is_a: CL:0000115 ! endothelial cell is_a: CL:0000666 ! fenestrated cell is_a: CL:1000746 ! glomerular cell intersection_of: CL:0000115 ! endothelial cell intersection_of: part_of UBERON:0000074 ! renal glomerulus relationship: part_of UBERON:0000074 ! renal glomerulus [Term] id: CL:0002191 name: granulocytopoietic cell namespace: FANTOM is_a: CL:0000839 ! myeloid lineage restricted progenitor cell [Term] id: CL:0002193 name: myelocyte namespace: FANTOM is_a: CL:0000763 ! myeloid cell is_a: CL:0002191 ! granulocytopoietic cell relationship: develops_from CL:0000836 ! promyelocyte [Term] id: CL:0002195 name: hepatic stem cell namespace: FANTOM is_a: CL:0000048 ! multi fate stem cell intersection_of: CL:0000048 ! multi fate stem cell intersection_of: part_of UBERON:0002107 ! liver relationship: part_of UBERON:0002107 ! liver [Term] id: CL:0002202 name: epithelial cell of tracheobronchial tree namespace: FANTOM is_a: CL:0002632 ! epithelial cell of lower respiratory tract intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0007196 ! tracheobronchial tree relationship: part_of UBERON:0007196 ! tracheobronchial tree [Term] id: CL:0002222 name: vertebrate lens cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0000306 ! crystallin accumulating cell is_a: CL:0002371 ! somatic cell relationship: part_of UBERON:0000965 ! lens of camera-type eye [Term] id: CL:0002224 name: lens epithelial cell namespace: FANTOM is_a: CL:0000075 ! columnar/cuboidal epithelial cell is_a: CL:0002222 ! vertebrate lens cell intersection_of: CL:0000075 ! columnar/cuboidal epithelial cell intersection_of: part_of UBERON:0001803 ! epithelium of lens relationship: part_of UBERON:0001803 ! epithelium of lens [Term] id: CL:0002231 name: epithelial cell of prostate namespace: FANTOM is_a: CL:0002076 ! endo-epithelial cell intersection_of: CL:0002076 ! endo-epithelial cell intersection_of: part_of UBERON:0002367 ! prostate gland relationship: part_of UBERON:0002367 ! prostate gland [Term] id: CL:0002242 name: nucleate cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0002250 name: intestinal crypt stem cell namespace: FANTOM is_a: CL:0000048 ! multi fate stem cell is_a: CL:0002563 ! intestinal epithelial cell intersection_of: CL:0000034 ! stem cell intersection_of: part_of UBERON:0001983 ! crypt of Lieberkuhn relationship: part_of UBERON:0001983 ! crypt of Lieberkuhn [Term] id: CL:0002251 name: epithelial cell of alimentary canal namespace: FANTOM is_a: CL:0002076 ! endo-epithelial cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0001555 ! digestive tract relationship: part_of UBERON:0001555 ! digestive tract [Term] id: CL:0002252 name: epithelial cell of esophagus namespace: FANTOM is_a: CL:0002251 ! epithelial cell of alimentary canal intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0001043 ! esophagus relationship: part_of UBERON:0001043 ! esophagus [Term] id: CL:0002255 name: stromal cell of endometrium namespace: FANTOM is_a: CL:0000499 ! stromal cell is_a: CL:0002149 ! epithelial cell of uterus intersection_of: CL:0000499 ! stromal cell intersection_of: part_of UBERON:0001295 ! endometrium relationship: part_of UBERON:0001295 ! endometrium [Term] id: CL:0002261 name: endothelial cell of viscerocranial mucosa namespace: FANTOM is_a: CL:0002076 ! endo-epithelial cell [Term] id: CL:0002262 name: endothelial cell of sinusoid namespace: FANTOM is_a: CL:0000115 ! endothelial cell intersection_of: CL:0000115 ! endothelial cell intersection_of: part_of UBERON:0003909 ! sinusoid relationship: part_of UBERON:0003909 ! sinusoid [Term] id: CL:0002274 name: histamine secreting cell namespace: FANTOM is_a: CL:0000457 ! biogenic amine secreting cell [Term] id: CL:0002293 name: epithelial cell of thymus namespace: FANTOM is_a: CL:0002076 ! endo-epithelial cell intersection_of: CL:0002076 ! endo-epithelial cell intersection_of: part_of UBERON:0002370 ! thymus relationship: part_of UBERON:0002370 ! thymus [Term] id: CL:0002304 name: non-pigmented ciliary epithelial cell namespace: FANTOM is_a: CL:0000067 ! ciliated epithelial cell is_a: CL:0000710 ! neurecto-epithelial cell is_a: CL:0005012 ! multi-ciliated epithelial cell intersection_of: CL:0000710 ! neurecto-epithelial cell intersection_of: part_of UBERON:0001778 ! ciliary epithelium relationship: part_of UBERON:0001778 ! ciliary epithelium [Term] id: CL:0002306 name: epithelial cell of proximal tubule namespace: FANTOM is_a: CL:0000239 ! brush border epithelial cell is_a: CL:0002078 ! meso-epithelial cell is_a: CL:1000615 ! kidney cortex tubule cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0004134 ! proximal tubule relationship: part_of UBERON:0004134 ! proximal tubule [Term] id: CL:0002308 name: epithelial cell of skin gland namespace: FANTOM is_a: CL:0002159 ! general ecto-epithelial cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0002419 ! skin gland relationship: part_of UBERON:0002419 ! skin gland [Term] id: CL:0002315 name: supporting cell of cochlea namespace: FANTOM is_a: CL:0001035 ! bone cell is_a: CL:0005014 ! auditory epithelial support cell intersection_of: CL:0005014 ! auditory epithelial support cell intersection_of: part_of UBERON:0001844 ! cochlea relationship: part_of UBERON:0001844 ! cochlea [Term] id: CL:0002319 name: neural cell namespace: FANTOM is_a: CL:0000548 ! animal cell is_a: CL:0002371 ! somatic cell [Term] id: CL:0002320 name: connective tissue cell namespace: FANTOM is_a: CL:0000548 ! animal cell is_a: CL:0002371 ! somatic cell intersection_of: CL:0002371 ! somatic cell intersection_of: part_of UBERON:0002384 ! connective tissue relationship: part_of UBERON:0002384 ! connective tissue [Term] id: CL:0002321 name: embryonic cell namespace: FANTOM is_a: CL:0000548 ! animal cell [Term] id: CL:0002322 name: embryonic stem cell namespace: FANTOM is_a: CL:0000034 ! stem cell is_a: CL:0002321 ! embryonic cell [Term] id: CL:0002327 name: mammary epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0002371 ! somatic cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0001911 ! mammary gland relationship: part_of UBERON:0001911 ! mammary gland [Term] id: CL:0002328 name: bronchial epithelial cell namespace: FANTOM is_a: CL:0002202 ! epithelial cell of tracheobronchial tree intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0002185 ! bronchus relationship: part_of UBERON:0002031 ! epithelium of bronchus relationship: part_of UBERON:0002185 ! bronchus [Term] id: CL:0002334 name: preadipocyte namespace: FANTOM is_a: CL:0000057 ! fibroblast [Term] id: CL:0002336 name: buccal mucosa cell namespace: FANTOM is_a: CL:0002261 ! endothelial cell of viscerocranial mucosa [Term] id: CL:0002363 name: keratocyte namespace: FANTOM is_a: CL:0000005 ! fibroblast neural crest derived intersection_of: CL:0000057 ! fibroblast intersection_of: part_of UBERON:0001777 ! substantia propria of cornea relationship: part_of UBERON:0001777 ! substantia propria of cornea [Term] id: CL:0002367 name: trabecular meshwork cell namespace: FANTOM is_a: CL:0000115 ! endothelial cell intersection_of: CL:0000115 ! endothelial cell intersection_of: part_of UBERON:0005969 ! reticulum trabeculare relationship: part_of UBERON:0005969 ! reticulum trabeculare [Term] id: CL:0002368 name: respiratory epithelial cell namespace: FANTOM is_a: CL:0002076 ! endo-epithelial cell intersection_of: CL:0002076 ! endo-epithelial cell intersection_of: part_of UBERON:0000065 ! respiratory tract relationship: part_of UBERON:0000065 ! respiratory tract [Term] id: CL:0002371 name: somatic cell namespace: FANTOM is_a: CL:0000003 ! native cell [Term] id: CL:0002372 name: myotube namespace: FANTOM is_a: CL:0000188 ! skeletal muscle cell is_a: CL:0000228 ! multinucleate cell is_a: CL:0000737 ! striated muscle cell relationship: develops_from CL:0000515 ! skeletal muscle myoblast [Term] id: CL:0002374 name: ear hair cell namespace: FANTOM is_a: CL:0000855 ! sensory hair cell [Term] id: CL:0002379 name: meningothelial cell namespace: FANTOM is_a: CL:0000710 ! neurecto-epithelial cell [Term] id: CL:0002393 name: intermediate monocyte namespace: FANTOM is_a: CL:0000576 ! monocyte [Term] id: CL:0002397 name: CD14-positive, CD16-positive monocyte namespace: FANTOM is_a: CL:0002393 ! intermediate monocyte relationship: develops_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte [Term] id: CL:0002419 name: mature T cell namespace: FANTOM is_a: CL:0000084 ! T cell [Term] id: CL:0002453 name: oligodendrocyte precursor cell namespace: FANTOM is_a: CL:0000123 ! neuron associated cell (sensu Vertebrata) intersection_of: CL:0000123 ! neuron associated cell (sensu Vertebrata) intersection_of: part_of UBERON:0001017 ! central nervous system relationship: part_of UBERON:0001017 ! central nervous system [Term] id: CL:0002476 name: bone marrow macrophage namespace: FANTOM is_a: CL:0000864 ! tissue-resident macrophage is_a: CL:1001610 ! bone marrow hematopoietic cell relationship: part_of UBERON:0002371 ! bone marrow [Term] id: CL:0002490 name: organ of Corti supporting cell namespace: FANTOM is_a: CL:0000068 ! duct epithelial cell is_a: CL:0002315 ! supporting cell of cochlea intersection_of: CL:0005014 ! auditory epithelial support cell intersection_of: part_of UBERON:0002227 ! spiral organ of cochlea relationship: part_of UBERON:0002227 ! spiral organ of cochlea [Term] id: CL:0002491 name: auditory epithelial cell namespace: FANTOM is_a: CL:0000098 ! sensory epithelial cell [Term] id: CL:0002494 name: cardiocyte namespace: FANTOM is_a: CL:0000548 ! animal cell is_a: CL:0002371 ! somatic cell intersection_of: CL:0002371 ! somatic cell intersection_of: part_of UBERON:0000948 ! heart relationship: part_of UBERON:0000948 ! heart [Term] id: CL:0002503 name: adventitial cell namespace: FANTOM is_a: CL:0000630 ! supportive cell is_a: CL:0002320 ! connective tissue cell intersection_of: CL:0002320 ! connective tissue cell intersection_of: part_of UBERON:0005742 ! adventitia relationship: part_of UBERON:0005742 ! adventitia [Term] id: CL:0002504 name: enteric smooth muscle cell namespace: FANTOM is_a: CL:0000192 ! smooth muscle cell intersection_of: CL:0000192 ! smooth muscle cell intersection_of: part_of UBERON:0000160 ! intestine relationship: part_of UBERON:0000160 ! intestine [Term] id: CL:0002518 name: kidney epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:1000497 ! kidney cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0002113 ! kidney relationship: part_of UBERON:0002113 ! kidney [Term] id: CL:0002521 name: subcutaneous fat cell namespace: FANTOM is_a: CL:0000136 ! fat cell intersection_of: CL:0000136 ! fat cell intersection_of: part_of UBERON:0002190 ! subcutaneous adipose tissue relationship: part_of UBERON:0002190 ! subcutaneous adipose tissue [Term] id: CL:0002535 name: epithelial cell of cervix namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0002371 ! somatic cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0000002 ! uterine cervix relationship: part_of UBERON:0000002 ! uterine cervix relationship: part_of UBERON:0004801 ! cervix epithelium [Term] id: CL:0002536 name: amniotic epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0000349 ! extraembryonic cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0000305 ! amnion relationship: part_of UBERON:0000305 ! amnion [Term] id: CL:0002537 name: amnion mesenchymal stem cell namespace: FANTOM is_a: CL:0000134 ! mesenchymal cell is_a: CL:0000349 ! extraembryonic cell intersection_of: CL:0000134 ! mesenchymal cell intersection_of: part_of UBERON:0000305 ! amnion relationship: part_of UBERON:0000305 ! amnion [Term] id: CL:0002539 name: aortic smooth muscle cell namespace: FANTOM is_a: CL:0000359 ! vascular associated smooth muscle cell intersection_of: CL:0000359 ! vascular associated smooth muscle cell intersection_of: part_of UBERON:0004178 ! aorta smooth muscle tissue relationship: part_of UBERON:0004178 ! aorta smooth muscle tissue [Term] id: CL:0002540 name: mesenchymal stem cell of the bone marrow namespace: FANTOM is_a: CL:0000134 ! mesenchymal cell is_a: CL:0002092 ! bone marrow cell intersection_of: CL:0000134 ! mesenchymal cell intersection_of: part_of UBERON:0002371 ! bone marrow relationship: part_of UBERON:0002371 ! bone marrow [Term] id: CL:0002541 name: chorionic membrane mesenchymal stem cell namespace: FANTOM is_a: CL:0000134 ! mesenchymal cell is_a: CL:0000349 ! extraembryonic cell intersection_of: CL:0000134 ! mesenchymal cell intersection_of: part_of UBERON:0003124 ! chorion relationship: part_of UBERON:0003124 ! chorion [Term] id: CL:0002543 name: vein endothelial cell namespace: FANTOM is_a: CL:0000071 ! blood vessel endothelial cell intersection_of: CL:0000071 ! blood vessel endothelial cell intersection_of: part_of UBERON:0001638 ! vein relationship: part_of UBERON:0001638 ! vein [Term] id: CL:0002544 name: aortic endothelial cell namespace: FANTOM is_a: CL:1000413 ! endothelial cell of artery [Term] id: CL:0002545 name: thoracic aorta endothelial cell namespace: FANTOM is_a: CL:0002544 ! aortic endothelial cell intersection_of: CL:0002544 ! aortic endothelial cell intersection_of: part_of UBERON:0001515 ! thoracic aorta relationship: part_of UBERON:0001515 ! thoracic aorta [Term] id: CL:0002547 name: fibroblast of the aortic adventitia namespace: FANTOM is_a: CL:1000306 ! fibroblast of tunica adventitia of artery intersection_of: CL:1000306 ! fibroblast of tunica adventitia of artery intersection_of: part_of UBERON:0004664 ! aorta tunica adventitia relationship: part_of UBERON:0004664 ! aorta tunica adventitia [Term] id: CL:0002548 name: cardiac fibroblast namespace: FANTOM is_a: CL:0000057 ! fibroblast is_a: CL:0002494 ! cardiocyte intersection_of: CL:0000057 ! fibroblast intersection_of: part_of UBERON:0000948 ! heart relationship: part_of UBERON:0000948 ! heart [Term] id: CL:0002549 name: fibroblast of choroid plexus namespace: FANTOM is_a: CL:0000057 ! fibroblast intersection_of: CL:0000057 ! fibroblast intersection_of: part_of UBERON:0001886 ! choroid plexus relationship: part_of UBERON:0001886 ! choroid plexus [Term] id: CL:0002550 name: fibroblast of the conjuctiva namespace: FANTOM is_a: CL:0000057 ! fibroblast intersection_of: CL:0000057 ! fibroblast intersection_of: part_of UBERON:0001811 ! conjunctiva relationship: part_of UBERON:0001811 ! conjunctiva [Term] id: CL:0002551 name: fibroblast of dermis namespace: FANTOM is_a: CL:0002620 ! skin fibroblast intersection_of: CL:0002620 ! skin fibroblast intersection_of: part_of UBERON:0002067 ! dermis relationship: part_of UBERON:0002067 ! dermis [Term] id: CL:0002552 name: fibroblast of gingiva namespace: FANTOM is_a: CL:0000057 ! fibroblast intersection_of: CL:0000057 ! fibroblast intersection_of: part_of UBERON:0001828 ! gingiva relationship: part_of UBERON:0001828 ! gingiva [Term] id: CL:0002553 name: lung fibroblast namespace: FANTOM is_a: CL:0000057 ! fibroblast is_a: CL_0000057 ! fibroblast intersection_of: CL:0000057 ! fibroblast intersection_of: part_of UBERON:0002048 ! lung relationship: part_of UBERON:0002048 ! lung [Term] id: CL:0002554 name: fibroblast of lymphatic vessel namespace: FANTOM is_a: CL:0000057 ! fibroblast intersection_of: CL:0000057 ! fibroblast intersection_of: part_of UBERON:0001473 ! lymphatic vessel relationship: part_of UBERON:0001473 ! lymphatic vessel [Term] id: CL:0002555 name: fibroblast of mammary gland namespace: FANTOM is_a: CL:0000057 ! fibroblast intersection_of: CL:0000057 ! fibroblast intersection_of: part_of UBERON:0001911 ! mammary gland relationship: part_of UBERON:0001911 ! mammary gland [Term] id: CL:0002556 name: fibroblast of periodontium namespace: FANTOM is_a: CL:0000057 ! fibroblast intersection_of: CL:0000057 ! fibroblast intersection_of: part_of UBERON:0001758 ! periodontium relationship: part_of UBERON:0001758 ! periodontium [Term] id: CL:0002557 name: fibroblast of pulmonary artery namespace: FANTOM is_a: CL:0000057 ! fibroblast intersection_of: CL:0000057 ! fibroblast intersection_of: part_of UBERON:0002012 ! pulmonary artery relationship: part_of UBERON:0002012 ! pulmonary artery [Term] id: CL:0002558 name: fibroblast of villous mesenchyme namespace: FANTOM is_a: CL:0000057 ! fibroblast is_a: CL:0000349 ! extraembryonic cell relationship: part_of UBERON:0001987 ! placenta [Term] id: CL:0002559 name: hair follicle cell namespace: FANTOM is_a: CL:0002371 ! somatic cell intersection_of: CL:0002371 ! somatic cell intersection_of: part_of UBERON:0002073 ! hair follicle relationship: part_of UBERON:0002073 ! hair follicle [Term] id: CL:0002561 name: outer root sheath cell namespace: FANTOM is_a: CL:0000362 ! epidermal cell is_a: CL:0002559 ! hair follicle cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0005942 ! hair outer root sheath relationship: part_of UBERON:0005942 ! hair outer root sheath [Term] id: CL:0002563 name: intestinal epithelial cell namespace: FANTOM is_a: CL:0002251 ! epithelial cell of alimentary canal intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0000160 ! intestine relationship: part_of UBERON:0000160 ! intestine relationship: part_of UBERON:0001277 ! intestinal epithelium [Term] id: CL:0002564 name: nucleus pulposus cell of intervertebral disc namespace: FANTOM is_a: CL:0002320 ! connective tissue cell is_a: UBERON:0002384 ! connective tissue intersection_of: UBERON:0002384 ! connective tissue intersection_of: part_of UBERON:0002242 ! nucleus pulposus relationship: part_of UBERON:0002242 ! nucleus pulposus [Term] id: CL:0002565 name: iris pigment epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0000342 ! pigment cell (sensu Vertebrata) intersection_of: CL:0000342 ! pigment cell (sensu Vertebrata) intersection_of: part_of UBERON:0002506 ! iris epithelium relationship: part_of UBERON:0002506 ! iris epithelium [Term] id: CL:0002566 name: dark melanocyte namespace: FANTOM is_a: CL:0000148 ! melanocyte [Term] id: CL:0002567 name: light melanocyte namespace: FANTOM is_a: CL:0000148 ! melanocyte [Term] id: CL:0002568 name: mesenchymal stem cell of Wharton's jelly namespace: FANTOM is_a: CL:0002569 ! mesenchymal stem cell of umbilical cord [Term] id: CL:0002569 name: mesenchymal stem cell of umbilical cord namespace: FANTOM is_a: CL:0000134 ! mesenchymal cell is_a: CL:0000349 ! extraembryonic cell intersection_of: CL:0000134 ! mesenchymal cell intersection_of: part_of UBERON:0003422 ! mesenchyme of umbilical cord relationship: part_of UBERON:0003422 ! mesenchyme of umbilical cord [Term] id: CL:0002570 name: mesenchymal stem cell of adipose namespace: FANTOM is_a: CL:0000134 ! mesenchymal cell intersection_of: CL:0000134 ! mesenchymal cell intersection_of: part_of UBERON:0001013 ! adipose tissue relationship: part_of UBERON:0001013 ! adipose tissue [Term] id: CL:0002571 name: hepatic mesenchymal stem cell namespace: FANTOM is_a: CL:0000134 ! mesenchymal cell is_a: CL:0002195 ! hepatic stem cell intersection_of: CL:0000134 ! mesenchymal cell intersection_of: part_of UBERON:0002107 ! liver relationship: part_of UBERON:0002107 ! liver [Term] id: CL:0002572 name: vertebral mesenchymal stem cell namespace: FANTOM is_a: CL:0000134 ! mesenchymal cell is_a: CL:0001035 ! bone cell intersection_of: CL:0000134 ! mesenchymal cell intersection_of: part_of UBERON:0002412 ! vertebra relationship: part_of UBERON:0002412 ! vertebra [Term] id: CL:0002573 name: Schwann cell namespace: FANTOM is_a: CL:0000243 ! glial cell (sensu Vertebrata) intersection_of: CL:0000243 ! glial cell (sensu Vertebrata) intersection_of: part_of UBERON:0000010 ! peripheral nervous system relationship: part_of UBERON:0000010 ! peripheral nervous system [Term] id: CL:0002574 name: stromal cell of pancreas namespace: FANTOM is_a: CL:0000499 ! stromal cell intersection_of: CL:0000499 ! stromal cell intersection_of: part_of UBERON:0001264 ! pancreas relationship: part_of UBERON:0001264 ! pancreas [Term] id: CL:0002575 name: central nervous system pericyte namespace: FANTOM is_a: CL:0000669 ! pericyte cell intersection_of: CL:0000669 ! pericyte cell intersection_of: part_of UBERON:0001017 ! central nervous system relationship: part_of UBERON:0001017 ! central nervous system [Term] id: CL:0002576 name: perineural cell namespace: FANTOM is_a: CL:0000186 ! myofibroblast cell is_a: CL:0002320 ! connective tissue cell intersection_of: CL:0000186 ! myofibroblast cell intersection_of: part_of UBERON:0000121 ! perineurium relationship: part_of UBERON:0000121 ! perineurium [Term] id: CL:0002577 name: placental epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0000349 ! extraembryonic cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0001987 ! placenta relationship: part_of UBERON:0001987 ! placenta [Term] id: CL:0002579 name: omentum preadipocyte namespace: FANTOM is_a: CL:0002334 ! preadipocyte intersection_of: CL:0002334 ! preadipocyte intersection_of: part_of UBERON:0003688 ! omentum relationship: part_of UBERON:0003688 ! omentum [Term] id: CL:0002580 name: preadipocyte of the breast namespace: FANTOM is_a: CL:0002334 ! preadipocyte intersection_of: CL:0002334 ! preadipocyte intersection_of: part_of UBERON:0000310 ! breast relationship: part_of UBERON:0000310 ! breast [Term] id: CL:0002581 name: perirenal preadipocyte namespace: FANTOM is_a: CL:0002334 ! preadipocyte intersection_of: CL:0002334 ! preadipocyte intersection_of: part_of UBERON:0005406 ! perirenal fat relationship: part_of UBERON:0005406 ! perirenal fat [Term] id: CL:0002582 name: visceral preadipocyte namespace: FANTOM is_a: CL:0002334 ! preadipocyte [Term] id: CL:0002583 name: subcutaneous preadipocyte namespace: FANTOM is_a: CL:0002334 ! preadipocyte intersection_of: CL:0002334 ! preadipocyte intersection_of: part_of UBERON:0002072 ! hypodermis relationship: part_of UBERON:0002072 ! hypodermis [Term] id: CL:0002584 name: renal cortical epithelial cell namespace: FANTOM is_a: CL:0002518 ! kidney epithelial cell is_a: CL:0002681 ! kidney cortical cell intersection_of: CL:0002518 ! kidney epithelial cell intersection_of: part_of UBERON:0001225 ! cortex of kidney relationship: part_of UBERON:0001225 ! cortex of kidney [Term] id: CL:0002586 name: retinal pigment epithelial cell namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0000149 ! visual pigment cell is_a: CL:0002371 ! somatic cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0001782 ! pigmented layer of retina relationship: part_of UBERON:0001782 ! pigmented layer of retina [Term] id: CL:0002588 name: smooth muscle cell of the umbilical vein namespace: FANTOM is_a: CL:0000359 ! vascular associated smooth muscle cell intersection_of: CL:0000359 ! vascular associated smooth muscle cell intersection_of: part_of UBERON:0002066 ! umbilical vein relationship: part_of UBERON:0002066 ! umbilical vein [Term] id: CL:0002589 name: smooth muscle cell of the brachiocephalic vasculature namespace: FANTOM is_a: CL:0000359 ! vascular associated smooth muscle cell intersection_of: CL:0000359 ! vascular associated smooth muscle cell intersection_of: part_of UBERON:0001529 ! brachiocephalic artery relationship: part_of UBERON:0001529 ! brachiocephalic artery [Term] id: CL:0002590 name: smooth muscle cell of the brain vasculature namespace: FANTOM is_a: CL:0000359 ! vascular associated smooth muscle cell intersection_of: CL:0000359 ! vascular associated smooth muscle cell intersection_of: part_of UBERON:0005284 ! brain vasculature relationship: part_of UBERON:0005284 ! brain vasculature [Term] id: CL:0002591 name: smooth muscle cell of the pulmonary artery namespace: FANTOM is_a: CL:0000359 ! vascular associated smooth muscle cell intersection_of: CL:0000359 ! vascular associated smooth muscle cell intersection_of: part_of UBERON:0002012 ! pulmonary artery relationship: part_of UBERON:0002012 ! pulmonary artery [Term] id: CL:0002592 name: smooth muscle cell of the coronary artery namespace: FANTOM is_a: CL:0000359 ! vascular associated smooth muscle cell is_a: CL:0002494 ! cardiocyte intersection_of: CL:0000359 ! vascular associated smooth muscle cell intersection_of: part_of UBERON:0001621 ! coronary artery relationship: part_of UBERON:0001621 ! coronary artery [Term] id: CL:0002593 name: smooth muscle cell of the internal thoracic artery namespace: FANTOM is_a: CL:0002595 ! smooth muscle cell of the subclavian artery intersection_of: CL:0000359 ! vascular associated smooth muscle cell intersection_of: part_of UBERON:0002456 ! internal thoracic artery relationship: part_of UBERON:0002456 ! internal thoracic artery [Term] id: CL:0002594 name: smooth muscle cell of the umbilical artery namespace: FANTOM is_a: CL:0000359 ! vascular associated smooth muscle cell intersection_of: CL:0000359 ! vascular associated smooth muscle cell intersection_of: part_of UBERON:0001310 ! umbilical artery relationship: part_of UBERON:0001310 ! umbilical artery [Term] id: CL:0002595 name: smooth muscle cell of the subclavian artery namespace: FANTOM is_a: CL:0000359 ! vascular associated smooth muscle cell intersection_of: CL:0000359 ! vascular associated smooth muscle cell intersection_of: part_of UBERON:0001533 ! subclavian artery relationship: part_of UBERON:0001533 ! subclavian artery [Term] id: CL:0002596 name: smooth muscle cell of the carotid artery namespace: FANTOM is_a: CL:0000359 ! vascular associated smooth muscle cell intersection_of: CL:0000359 ! vascular associated smooth muscle cell intersection_of: part_of UBERON:0005396 ! carotid artery segment relationship: part_of UBERON:0005396 ! carotid artery segment [Term] id: CL:0002597 name: smooth muscle cell of bladder namespace: FANTOM is_a: CL:0000192 ! smooth muscle cell is_a: CL:1001319 ! bladder cell intersection_of: CL:0000192 ! smooth muscle cell intersection_of: part_of UBERON:0001255 ! urinary bladder relationship: part_of UBERON:0001255 ! urinary bladder [Term] id: CL:0002598 name: bronchial smooth muscle cell namespace: FANTOM is_a: CL:0000192 ! smooth muscle cell intersection_of: CL:0000192 ! smooth muscle cell intersection_of: part_of UBERON:0002185 ! bronchus relationship: part_of UBERON:0002185 ! bronchus [Term] id: CL:0002599 name: smooth muscle cell of the esophagus namespace: FANTOM is_a: CL:0000192 ! smooth muscle cell intersection_of: CL:0000192 ! smooth muscle cell intersection_of: part_of UBERON:0001043 ! esophagus relationship: part_of UBERON:0001043 ! esophagus [Term] id: CL:0002600 name: smooth muscle cell of trachea namespace: FANTOM is_a: CL:0000192 ! smooth muscle cell intersection_of: CL:0000192 ! smooth muscle cell intersection_of: part_of UBERON:0003126 ! trachea relationship: part_of UBERON:0003126 ! trachea [Term] id: CL:0002601 name: uterine smooth muscle cell namespace: FANTOM is_a: CL:0000192 ! smooth muscle cell intersection_of: CL:0000192 ! smooth muscle cell intersection_of: part_of UBERON:0000995 ! uterus relationship: part_of UBERON:0000995 ! uterus [Term] id: CL:0002602 name: annulus pulposus cell namespace: FANTOM is_a: CL:0002320 ! connective tissue cell intersection_of: CL:0002320 ! connective tissue cell intersection_of: part_of UBERON:0004715 ! annulus fibrosus disci intervertebralis relationship: part_of UBERON:0004715 ! annulus fibrosus disci intervertebralis [Term] id: CL:0002603 name: astrocyte of the cerebellum namespace: FANTOM is_a: CL:0000127 ! astrocyte is_a: CL:0000128 ! oligodendrocyte intersection_of: CL:0000127 ! astrocyte intersection_of: part_of UBERON:0002037 ! cerebellum relationship: part_of UBERON:0002037 ! cerebellum [Term] id: CL:0002604 name: astrocyte of the hippocampus namespace: FANTOM is_a: CL:0002605 ! astrocyte of the cerebral cortex is_a: CL:1001580 ! hippocampus glial cell intersection_of: CL:0000127 ! astrocyte intersection_of: part_of UBERON:0001954 ! Ammon's horn relationship: part_of UBERON:0001954 ! Ammon's horn [Term] id: CL:0002605 name: astrocyte of the cerebral cortex namespace: FANTOM is_a: CL:0012000 ! astrocyte of the forebrain is_a: CL:1001579 ! cerebral cortex glial cell intersection_of: CL:0000127 ! astrocyte intersection_of: part_of UBERON:0000956 ! cerebral cortex relationship: part_of UBERON:0000956 ! cerebral cortex [Term] id: CL:0002608 name: hippocampal neuron namespace: FANTOM is_a: CL:0002609 ! neuron of cerebral cortex intersection_of: CL:0000117 ! CNS neuron (sensu Vertebrata) intersection_of: part_of UBERON:0001954 ! Ammon's horn relationship: part_of UBERON:0001954 ! Ammon's horn [Term] id: CL:0002609 name: neuron of cerebral cortex namespace: FANTOM is_a: CL:0012001 ! neuron of the forebrain intersection_of: CL:0000117 ! CNS neuron (sensu Vertebrata) intersection_of: part_of UBERON:0000956 ! cerebral cortex relationship: part_of UBERON:0000956 ! cerebral cortex [Term] id: CL:0002610 name: raphe nuclei neuron namespace: FANTOM is_a: CL:0000117 ! CNS neuron (sensu Vertebrata) intersection_of: CL:0000117 ! CNS neuron (sensu Vertebrata) intersection_of: part_of UBERON:0004684 ! raphe nuclei relationship: part_of UBERON:0004684 ! raphe nuclei [Term] id: CL:0002611 name: neuron of the dorsal spinal cord namespace: FANTOM is_a: CL:0000117 ! CNS neuron (sensu Vertebrata) intersection_of: CL:0000117 ! CNS neuron (sensu Vertebrata) intersection_of: part_of UBERON:0002256 ! dorsal horn of spinal cord relationship: part_of UBERON:0002256 ! dorsal horn of spinal cord [Term] id: CL:0002612 name: neuron of the ventral spinal cord namespace: FANTOM is_a: CL:0000117 ! CNS neuron (sensu Vertebrata) intersection_of: CL:0000117 ! CNS neuron (sensu Vertebrata) intersection_of: part_of UBERON:0002257 ! ventral horn of spinal cord relationship: part_of UBERON:0002257 ! ventral horn of spinal cord [Term] id: CL:0002613 name: striatum neuron namespace: FANTOM is_a: CL:0012001 ! neuron of the forebrain intersection_of: CL:0000117 ! CNS neuron (sensu Vertebrata) intersection_of: part_of UBERON:0002435 ! striatum relationship: part_of UBERON:0002435 ! striatum [Term] id: CL:0002614 name: neuron of the substantia nigra namespace: FANTOM is_a: CL:0012001 ! neuron of the forebrain intersection_of: CL:0000117 ! CNS neuron (sensu Vertebrata) intersection_of: part_of UBERON:0002038 ! substantia nigra relationship: part_of UBERON:0002038 ! substantia nigra [Term] id: CL:0002615 name: adipocyte of omentum tissue namespace: FANTOM is_a: CL:0000136 ! fat cell intersection_of: CL:0000136 ! fat cell intersection_of: part_of UBERON:0003688 ! omentum relationship: part_of UBERON:0003688 ! omentum [Term] id: CL:0002616 name: perirenal adipocyte cell namespace: FANTOM is_a: CL:0000136 ! fat cell intersection_of: CL:0000136 ! fat cell intersection_of: part_of UBERON:0005406 ! perirenal fat relationship: part_of UBERON:0005406 ! perirenal fat [Term] id: CL:0002617 name: adipocyte of breast namespace: FANTOM is_a: CL:0000136 ! fat cell intersection_of: CL:0000136 ! fat cell intersection_of: part_of UBERON:0000310 ! breast relationship: part_of UBERON:0000310 ! breast [Term] id: CL:0002618 name: endothelial cell of umbilical vein namespace: FANTOM is_a: CL:0002543 ! vein endothelial cell intersection_of: CL:0000115 ! endothelial cell intersection_of: part_of UBERON:0002066 ! umbilical vein relationship: part_of UBERON:0002066 ! umbilical vein [Term] id: CL:0002619 name: adult endothelial progenitor cell namespace: FANTOM is_a: CL:0000566 ! angioblastic mesenchymal cell [Term] id: CL:0002620 name: skin fibroblast namespace: FANTOM is_a: CL:0000057 ! fibroblast intersection_of: CL:0000057 ! fibroblast intersection_of: part_of UBERON:0002097 ! skin of body relationship: part_of UBERON:0002097 ! skin of body [Term] id: CL:0002621 name: gingival epithelial cell namespace: FANTOM is_a: CL:0002251 ! epithelial cell of alimentary canal intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0001949 ! gingival epithelium relationship: part_of UBERON:0001949 ! gingival epithelium [Term] id: CL:0002622 name: prostate stromal cell namespace: FANTOM is_a: CL:0000499 ! stromal cell intersection_of: CL:0000499 ! stromal cell intersection_of: part_of UBERON:0002367 ! prostate gland relationship: part_of UBERON:0002367 ! prostate gland [Term] id: CL:0002623 name: acinar cell of salivary gland namespace: FANTOM is_a: CL:0000622 ! acinar cell is_a: CL:1001596 ! salivary gland glandular cell intersection_of: CL:0000622 ! acinar cell intersection_of: part_of UBERON:0001044 ! salivary gland relationship: part_of UBERON:0001044 ! salivary gland [Term] id: CL:0002625 name: seminiferous tubule epithelial cell namespace: FANTOM is_a: CL:0000068 ! duct epithelial cell is_a: CL:0000077 ! mesothelial cell is_a: UBERON:0004813 ! seminiferous tubule epithelium intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0001343 ! seminiferous tubule of testis relationship: part_of UBERON:0001343 ! seminiferous tubule of testis [Term] id: CL:0002632 name: epithelial cell of lower respiratory tract namespace: FANTOM is_a: CL:0002368 ! respiratory epithelial cell intersection_of: CL:0002368 ! respiratory epithelial cell intersection_of: part_of UBERON:0001558 ! lower respiratory tract relationship: part_of UBERON:0001558 ! lower respiratory tract [Term] id: CL:0002677 name: naive regulatory T cell namespace: FANTOM is_a: CL:0000792 ! CD4-positive, CD25-positive, alpha-beta regulatory T cell is_a: CL:0000898 ! naive T cell [Term] id: CL:0002679 name: natural helper lymphocyte namespace: FANTOM is_a: CL:0000542 ! lymphocyte [Term] id: CL:0002681 name: kidney cortical cell namespace: FANTOM is_a: CL:1000497 ! kidney cell intersection_of: CL:1000497 ! kidney cell intersection_of: part_of UBERON:0001225 ! cortex of kidney relationship: part_of UBERON:0001225 ! cortex of kidney [Term] id: CL:0005012 name: multi-ciliated epithelial cell namespace: FANTOM is_a: CL:0000064 ! ciliated cell is_a: CL:0000066 ! epithelial cell [Term] id: CL:0005014 name: auditory epithelial support cell namespace: FANTOM is_a: CL:0000630 ! supportive cell is_a: CL:0000710 ! neurecto-epithelial cell is_a: CL:0002491 ! auditory epithelial cell [Term] id: CL:0010003 name: epithelial cell of alveolus of lung namespace: FANTOM is_a: CL:0000082 ! epithelial cell of lung intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0002299 ! alveolus of lung relationship: part_of UBERON:0002299 ! alveolus of lung [Term] id: CL:0012000 name: astrocyte of the forebrain namespace: FANTOM is_a: CL:0000127 ! astrocyte is_a: CL:0000128 ! oligodendrocyte intersection_of: CL:0000127 ! astrocyte intersection_of: part_of UBERON:0001890 ! forebrain relationship: part_of UBERON:0001890 ! forebrain [Term] id: CL:0012001 name: neuron of the forebrain namespace: FANTOM is_a: CL:0000117 ! CNS neuron (sensu Vertebrata) intersection_of: CL:0000117 ! CNS neuron (sensu Vertebrata) intersection_of: part_of UBERON:0001890 ! forebrain relationship: part_of UBERON:0001890 ! forebrain [Term] id: CL:1000279 name: smooth muscle cell of large intestine namespace: FANTOM is_a: CL:0002504 ! enteric smooth muscle cell intersection_of: CL:0002504 ! enteric smooth muscle cell intersection_of: part_of UBERON:0000059 ! large intestine relationship: part_of UBERON:0000059 ! large intestine [Term] id: CL:1000280 name: smooth muscle cell of colon namespace: FANTOM is_a: CL:1000279 ! smooth muscle cell of large intestine intersection_of: CL:0002504 ! enteric smooth muscle cell intersection_of: part_of UBERON:0001155 ! colon relationship: part_of UBERON:0001155 ! colon [Term] id: CL:1000306 name: fibroblast of tunica adventitia of artery namespace: FANTOM is_a: CL:0000057 ! fibroblast is_a: CL:0002503 ! adventitial cell intersection_of: CL:0000057 ! fibroblast intersection_of: part_of UBERON:0005734 ! tunica adventitia of blood vessel relationship: part_of UBERON:0005734 ! tunica adventitia of blood vessel [Term] id: CL:1000398 name: endothelial cell of hepatic sinusoid namespace: FANTOM is_a: CL:0000182 ! hepatocyte is_a: CL:0002262 ! endothelial cell of sinusoid intersection_of: CL:0002262 ! endothelial cell of sinusoid intersection_of: part_of UBERON:0001281 ! hepatic sinusoid relationship: part_of UBERON:0001281 ! hepatic sinusoid [Term] id: CL:1000413 name: endothelial cell of artery namespace: FANTOM is_a: CL:0000071 ! blood vessel endothelial cell intersection_of: CL:0000115 ! endothelial cell intersection_of: part_of UBERON:0001637 ! artery relationship: part_of UBERON:0001637 ! artery relationship: part_of UBERON:0001917 ! endothelium of artery [Term] id: CL:1000415 name: epithelial cell of gall bladder namespace: FANTOM is_a: CL:0000066 ! epithelial cell is_a: CL:0002371 ! somatic cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0002110 ! gallbladder relationship: part_of UBERON:0002110 ! gallbladder [Term] id: CL:1000428 name: stem cell of epidermis namespace: FANTOM is_a: CL:0000723 ! somatic stem cell intersection_of: CL:0000723 ! somatic stem cell intersection_of: part_of UBERON:0001003 ! epidermis relationship: part_of UBERON:0001003 ! epidermis [Term] id: CL:1000448 name: epithelial cell of sweat gland namespace: FANTOM is_a: CL:0000362 ! epidermal cell is_a: CL:0002308 ! epithelial cell of skin gland intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0001820 ! sweat gland relationship: part_of UBERON:0001820 ! sweat gland [Term] id: CL:1000449 name: epithelial cell of nephron namespace: FANTOM is_a: CL:0002518 ! kidney epithelial cell intersection_of: CL:0000066 ! epithelial cell intersection_of: part_of UBERON:0001285 ! nephron relationship: part_of UBERON:0001285 ! nephron [Term] id: CL:1000487 name: smooth muscle cell of prostate namespace: FANTOM is_a: CL:0000192 ! smooth muscle cell intersection_of: CL:0000192 ! smooth muscle cell intersection_of: part_of UBERON:0002367 ! prostate gland relationship: part_of UBERON:0002367 ! prostate gland [Term] id: CL:1000494 name: epithelial cell of renal tubule namespace: FANTOM is_a: CL:1000449 ! epithelial cell of nephron is_a: CL:1000507 ! kidney tubule cell intersection_of: CL:0002518 ! kidney epithelial cell intersection_of: part_of UBERON:0001231 ! nephron tubule relationship: part_of UBERON:0001231 ! nephron tubule relationship: part_of UBERON:0004810 ! nephron tubule epithelium [Term] id: CL:1000497 name: kidney cell namespace: FANTOM is_a: CL:0000548 ! animal cell is_a: CL:0002371 ! somatic cell intersection_of: CL:0000548 ! animal cell intersection_of: part_of UBERON:0002113 ! kidney relationship: part_of UBERON:0002113 ! kidney [Term] id: CL:1000507 name: kidney tubule cell namespace: FANTOM is_a: CL:1000497 ! kidney cell intersection_of: CL:1000497 ! kidney cell intersection_of: part_of UBERON:0001231 ! nephron tubule relationship: part_of UBERON:0001231 ! nephron tubule [Term] id: CL:1000600 name: lower urinary tract cell namespace: FANTOM is_a: CL:0000548 ! animal cell intersection_of: CL:0000548 ! animal cell intersection_of: part_of UBERON:0001556 ! lower urinary tract relationship: part_of UBERON:0001556 ! lower urinary tract [Term] id: CL:1000612 name: kidney corpuscule cell namespace: FANTOM is_a: CL:0002584 ! renal cortical epithelial cell is_a: CL:1000449 ! epithelial cell of nephron intersection_of: CL:0002584 ! renal cortical epithelial cell intersection_of: part_of UBERON:0001229 ! renal corpuscle relationship: part_of UBERON:0001229 ! renal corpuscle [Term] id: CL:1000615 name: kidney cortex tubule cell namespace: FANTOM is_a: CL:0002584 ! renal cortical epithelial cell is_a: CL:1000494 ! epithelial cell of renal tubule intersection_of: CL:1000507 ! kidney tubule cell intersection_of: part_of UBERON:0006853 ! renal cortex tubule relationship: part_of UBERON:0006853 ! renal cortex tubule [Term] id: CL:1000746 name: glomerular cell namespace: FANTOM is_a: CL:1000612 ! kidney corpuscule cell intersection_of: CL:1000612 ! kidney corpuscule cell intersection_of: part_of UBERON:0000074 ! renal glomerulus relationship: part_of UBERON:0000074 ! renal glomerulus [Term] id: CL:1001319 name: bladder cell namespace: FANTOM is_a: CL:1000600 ! lower urinary tract cell intersection_of: CL:0000548 ! animal cell intersection_of: part_of UBERON:0001255 ! urinary bladder relationship: part_of UBERON:0001255 ! urinary bladder [Term] id: CL:1001579 name: cerebral cortex glial cell namespace: FANTOM is_a: CL:0000125 ! glial cell intersection_of: CL:0000125 ! glial cell intersection_of: part_of UBERON:0000956 ! cerebral cortex relationship: part_of UBERON:0000956 ! cerebral cortex [Term] id: CL:1001580 name: hippocampus glial cell namespace: FANTOM is_a: CL:1001579 ! cerebral cortex glial cell intersection_of: CL:0000125 ! glial cell intersection_of: part_of UBERON:0001954 ! Ammon's horn relationship: part_of UBERON:0001954 ! Ammon's horn [Term] id: CL:1001596 name: salivary gland glandular cell namespace: FANTOM is_a: CL:0000150 ! glandular epithelial cell is_a: CL:0002251 ! epithelial cell of alimentary canal intersection_of: CL:0000150 ! glandular epithelial cell intersection_of: part_of UBERON:0001044 ! salivary gland relationship: part_of UBERON:0001044 ! salivary gland relationship: part_of UBERON:0004809 ! salivary gland epithelium [Term] id: CL:1001610 name: bone marrow hematopoietic cell namespace: FANTOM is_a: CL:0000988 ! hematopoietic cell is_a: CL:0002092 ! bone marrow cell intersection_of: CL:0000988 ! hematopoietic cell intersection_of: part_of UBERON:0002371 ! bone marrow relationship: part_of UBERON:0002371 ! bone marrow relationship: part_of UBERON:0012429 ! hemopoietic tissue [Term] id: CL_0000056 name: myoblast namespace: FANTOM is_a: CL_0002321 ! embryonic cell [Term] id: CL_0000057 name: fibroblast namespace: FANTOM is_a: EFO:0000324 ! cell type [Term] id: CL_0002321 name: embryonic cell namespace: FANTOM is_a: EFO:0000324 ! cell type [Term] id: DOID:0050117 name: disease by infectious agent namespace: FANTOM is_a: DOID:4 ! disease [Term] id: DOID:0050155 name: sensory system disease namespace: FANTOM is_a: DOID:863 ! nervous system disease [Term] id: DOID:0050177 name: monogenic disease namespace: FANTOM is_a: DOID:630 ! genetic disease [Term] id: DOID:0050427 name: xeroderma pigmentosum namespace: FANTOM is_a: DOID:0050737 ! autosomal recessive disease [Term] id: DOID:0050557 name: congenital muscular dystrophy namespace: FANTOM is_a: DOID:9884 ! muscular dystrophy [Term] id: DOID:0050560 name: Walker-Warburg syndrome namespace: FANTOM is_a: DOID:0050557 ! congenital muscular dystrophy [Term] id: DOID:0050615 name: respiratory system cancer namespace: FANTOM is_a: DOID:0050686 ! organ system cancer [Term] id: DOID:0050619 name: paranasal sinus cancer namespace: FANTOM is_a: DOID:0050615 ! respiratory system cancer [Term] id: DOID:0050686 name: organ system cancer namespace: FANTOM is_a: DOID:162 ! cancer [Term] id: DOID:0050687 name: cell type cancer namespace: FANTOM is_a: DOID:162 ! cancer [Term] id: DOID:0050700 name: cardiomyopathy namespace: FANTOM is_a: DOID:114 ! heart disease [Term] id: DOID:0050737 name: autosomal recessive disease namespace: FANTOM is_a: DOID:0050739 ! autosomal genetic disease [Term] id: DOID:0050739 name: autosomal genetic disease namespace: FANTOM is_a: DOID:0050177 ! monogenic disease [Term] id: DOID:0050743 name: mature T-cell and NK-cell neoplasm namespace: FANTOM is_a: DOID:0060058 ! lymphoma [Term] id: DOID:0050749 name: peripheral T-cell lymphoma namespace: FANTOM is_a: DOID:0050743 ! mature T-cell and NK-cell neoplasm [Term] id: DOID:0060058 name: lymphoma namespace: FANTOM is_a: DOID:2531 ! hematologic cancer [Term] id: DOID:0060061 name: cutaneous T cell lymphoma namespace: FANTOM is_a: DOID:0050749 ! peripheral T-cell lymphoma [Term] id: DOID:0060072 name: benign neoplasm namespace: FANTOM is_a: DOID:14566 ! disease of cellular proliferation [Term] id: DOID:0060073 name: lymphatic system cancer namespace: FANTOM is_a: DOID:0060083 ! immune system cancer [Term] id: DOID:0060083 name: immune system cancer namespace: FANTOM is_a: DOID:0050686 ! organ system cancer [Term] id: DOID:0060084 name: cell type benign neoplasm namespace: FANTOM is_a: DOID:0060072 ! benign neoplasm [Term] id: DOID:0060100 name: musculoskeletal system cancer namespace: FANTOM is_a: DOID:0050686 ! organ system cancer [Term] id: DOID:0060116 name: sensory system cancer namespace: FANTOM is_a: DOID:3093 ! nervous system cancer [Term] id: DOID:0060119 name: pharynx cancer namespace: FANTOM is_a: DOID:3119 ! gastrointestinal system cancer [Term] id: DOID:0060122 name: integumentary system cancer namespace: FANTOM is_a: DOID:0050686 ! organ system cancer [Term] id: DOID:0060124 name: skeletal system cancer namespace: FANTOM is_a: DOID:0060100 ! musculoskeletal system cancer [Term] id: DOID:0070004 name: myeloma namespace: FANTOM is_a: DOID:4960 ! bone marrow cancer [Term] id: DOID:0080000 name: muscular disease namespace: FANTOM is_a: DOID:17 ! musculoskeletal system disease [Term] id: DOID:10155 name: intestinal cancer namespace: FANTOM is_a: DOID:3119 ! gastrointestinal system cancer [Term] id: DOID:10165 name: endocrine pancreas cancer namespace: FANTOM is_a: DOID:1799 ! islet cell tumor [Term] id: DOID:10283 name: prostate cancer namespace: FANTOM is_a: DOID:3856 ! male reproductive organ cancer [Term] id: DOID:1036 name: chronic leukemia namespace: FANTOM is_a: DOID:1240 ! leukemia [Term] id: DOID:1037 name: lymphoblastic leukemia namespace: FANTOM is_a: DOID:1240 ! leukemia [Term] id: DOID:1040 name: chronic lymphocytic leukemia namespace: FANTOM is_a: DOID:1036 ! chronic leukemia is_a: DOID:1037 ! lymphoblastic leukemia [Term] id: DOID:10534 name: stomach cancer namespace: FANTOM is_a: DOID:3119 ! gastrointestinal system cancer [Term] id: DOID:1115 name: sarcoma namespace: FANTOM is_a: DOID:0050687 ! cell type cancer [Term] id: DOID:114 name: heart disease namespace: FANTOM is_a: DOID:1287 ! cardiovascular system disease [Term] id: DOID:11722 name: myotonic dystrophy namespace: FANTOM is_a: DOID:450 ! myotonic disease [Term] id: DOID:1192 name: peripheral nervous system neoplasm namespace: FANTOM is_a: DOID:3093 ! nervous system cancer [Term] id: DOID:120 name: female reproductive organ cancer namespace: FANTOM is_a: DOID:193 ! reproductive organ cancer [Term] id: DOID:12377 name: spinal muscular atrophy namespace: FANTOM is_a: DOID:231 ! motor neuron disease [Term] id: DOID:1240 name: leukemia namespace: FANTOM is_a: DOID:2531 ! hematologic cancer [Term] id: DOID:1242 name: globe disease namespace: FANTOM is_a: DOID:1492 ! eye and adnexa disease [Term] id: DOID:12603 name: acute leukemia namespace: FANTOM is_a: DOID:1240 ! leukemia [Term] id: DOID:127 name: leiomyoma namespace: FANTOM is_a: DOID:0060084 ! cell type benign neoplasm [Term] id: DOID:1287 name: cardiovascular system disease namespace: FANTOM is_a: DOID:7 ! disease of anatomical entity [Term] id: DOID:1289 name: neurodegenerative disease namespace: FANTOM is_a: DOID:331 ! central nervous system disease [Term] id: DOID:1319 name: brain cancer namespace: FANTOM is_a: DOID:3620 ! central nervous system cancer [Term] id: DOID:1324 name: lung cancer namespace: FANTOM is_a: DOID:0050615 ! respiratory system cancer [Term] id: DOID:1325 name: bronchus cancer namespace: FANTOM is_a: DOID:1324 ! lung cancer [Term] id: DOID:1357 name: maxillary sinus cancer namespace: FANTOM is_a: DOID:0050619 ! paranasal sinus cancer [Term] id: DOID:1380 name: endometrial cancer namespace: FANTOM is_a: DOID:363 ! uterine cancer [Term] id: DOID:14566 name: disease of cellular proliferation namespace: FANTOM is_a: DOID:4 ! disease [Term] id: DOID:1492 name: eye and adnexa disease namespace: FANTOM is_a: DOID:0050155 ! sensory system disease [Term] id: DOID:154 name: mixed cell type cancer namespace: FANTOM is_a: DOID:0050687 ! cell type cancer [Term] id: DOID:1612 name: breast cancer namespace: FANTOM is_a: DOID:5093 ! thoracic cancer [Term] id: DOID:162 name: cancer namespace: FANTOM is_a: DOID:14566 ! disease of cellular proliferation [Term] id: DOID:169 name: neuroendocrine tumor namespace: FANTOM is_a: DOID:171 ! neuroectodermal tumor [Term] id: DOID:17 name: musculoskeletal system disease namespace: FANTOM is_a: DOID:7 ! disease of anatomical entity [Term] id: DOID:170 name: endocrine gland cancer namespace: FANTOM is_a: DOID:0050686 ! organ system cancer [Term] id: DOID:171 name: neuroectodermal tumor namespace: FANTOM is_a: DOID:3095 ! germ cell and embryonal cancer [Term] id: DOID:1749 name: squamous cell carcinoma namespace: FANTOM is_a: DOID:305 ! carcinoma [Term] id: DOID:1781 name: thyroid cancer namespace: FANTOM is_a: DOID:170 ! endocrine gland cancer [Term] id: DOID:1793 name: pancreatic cancer namespace: FANTOM is_a: DOID:170 ! endocrine gland cancer [Term] id: DOID:1798 name: pancreatic endocrine carcinoma namespace: FANTOM is_a: DOID:10165 ! endocrine pancreas cancer [Term] id: DOID:1799 name: islet cell tumor namespace: FANTOM is_a: DOID:1793 ! pancreatic cancer [Term] id: DOID:184 name: bone cancer namespace: FANTOM is_a: DOID:0060124 ! skeletal system cancer [Term] id: DOID:1907 name: malignant fibroxanthoma namespace: FANTOM is_a: DOID:4231 ! histiocytoma [Term] id: DOID:1909 name: melanoma namespace: FANTOM is_a: DOID:0050687 ! cell type cancer [Term] id: DOID:193 name: reproductive organ cancer namespace: FANTOM is_a: DOID:0050686 ! organ system cancer [Term] id: DOID:1967 name: leiomyosarcoma namespace: FANTOM is_a: DOID:4230 ! smooth muscle cancer [Term] id: DOID:200 name: giant cell tumor namespace: FANTOM is_a: DOID:201 ! connective tissue cancer [Term] id: DOID:201 name: connective tissue cancer namespace: FANTOM is_a: DOID:0060100 ! musculoskeletal system cancer [Term] id: DOID:2021 name: placenta cancer namespace: FANTOM is_a: DOID:120 ! female reproductive organ cancer [Term] id: DOID:2152 name: ovary epithelial cancer namespace: FANTOM is_a: DOID:2394 ! ovarian cancer [Term] id: DOID:2174 name: ocular cancer namespace: FANTOM is_a: DOID:0060116 ! sensory system cancer [Term] id: DOID:225 name: syndrome namespace: FANTOM is_a: DOID:4 ! disease [Term] id: DOID:231 name: motor neuron disease namespace: FANTOM is_a: DOID:1289 ! neurodegenerative disease [Term] id: DOID:2355 name: anemia namespace: FANTOM is_a: DOID:74 ! hematopoietic system disease [Term] id: DOID:2394 name: ovarian cancer namespace: FANTOM is_a: DOID:120 ! female reproductive organ cancer [Term] id: DOID:2513 name: basal cell carcinoma namespace: FANTOM is_a: DOID:3451 ! skin carcinoma [Term] id: DOID:2531 name: hematologic cancer namespace: FANTOM is_a: DOID:0060083 ! immune system cancer [Term] id: DOID:263 name: kidney cancer namespace: FANTOM is_a: DOID:3996 ! urinary system cancer [Term] id: DOID:2671 name: transitional cell carcinoma namespace: FANTOM is_a: DOID:305 ! carcinoma [Term] id: DOID:285 name: hairy cell leukemia namespace: FANTOM is_a: DOID:1040 ! chronic lymphocytic leukemia [Term] id: DOID:2914 name: immune system disease namespace: FANTOM is_a: DOID:7 ! disease of anatomical entity [Term] id: DOID:299 name: adenocarcinoma namespace: FANTOM is_a: DOID:305 ! carcinoma [Term] id: DOID:2994 name: germ cell cancer namespace: FANTOM is_a: DOID:0050687 ! cell type cancer [Term] id: DOID:2998 name: testicular cancer namespace: FANTOM is_a: DOID:3856 ! male reproductive organ cancer [Term] id: DOID:3030 name: mucinous adenocarcinoma namespace: FANTOM is_a: DOID:299 ! adenocarcinoma [Term] id: DOID:305 name: carcinoma namespace: FANTOM is_a: DOID:0050687 ! cell type cancer [Term] id: DOID:3068 name: glioblastoma namespace: FANTOM is_a: DOID:3069 ! astrocytoma [Term] id: DOID:3069 name: astrocytoma namespace: FANTOM is_a: DOID:3070 ! malignant glioma [Term] id: DOID:3070 name: malignant glioma namespace: FANTOM is_a: DOID:0050687 ! cell type cancer [Term] id: DOID:3093 name: nervous system cancer namespace: FANTOM is_a: DOID:0050686 ! organ system cancer [Term] id: DOID:3095 name: germ cell and embryonal cancer namespace: FANTOM is_a: DOID:2994 ! germ cell cancer [Term] id: DOID:3111 name: cystadenocarcinoma namespace: FANTOM is_a: DOID:299 ! adenocarcinoma [Term] id: DOID:3112 name: papillary adenocarcinoma namespace: FANTOM is_a: DOID:299 ! adenocarcinoma [Term] id: DOID:3119 name: gastrointestinal system cancer namespace: FANTOM is_a: DOID:0050686 ! organ system cancer [Term] id: DOID:3149 name: keratoacanthoma namespace: FANTOM is_a: DOID:3151 ! skin squamous cell carcinoma [Term] id: DOID:3151 name: skin squamous cell carcinoma namespace: FANTOM is_a: DOID:3451 ! skin carcinoma [Term] id: DOID:3193 name: peripheral nerve sheath neoplasm namespace: FANTOM is_a: DOID:1192 ! peripheral nervous system neoplasm [Term] id: DOID:3247 name: rhabdomyosarcoma namespace: FANTOM is_a: DOID:4043 ! skeletal muscle cancer [Term] id: DOID:3307 name: teratoma namespace: FANTOM is_a: DOID:3095 ! germ cell and embryonal cancer [Term] id: DOID:331 name: central nervous system disease namespace: FANTOM is_a: DOID:863 ! nervous system disease [Term] id: DOID:3347 name: osteosarcoma namespace: FANTOM is_a: DOID:201 ! connective tissue cancer [Term] id: DOID:3350 name: mesenchymal cell neoplasm namespace: FANTOM is_a: DOID:0050687 ! cell type cancer [Term] id: DOID:3355 name: fibrosarcoma namespace: FANTOM is_a: DOID:201 ! connective tissue cancer [Term] id: DOID:3369 name: peripheral primitive neuroectodermal tumor namespace: FANTOM is_a: DOID:1192 ! peripheral nervous system neoplasm [Term] id: DOID:3371 name: chondrosarcoma namespace: FANTOM is_a: DOID:201 ! connective tissue cancer [Term] id: DOID:3382 name: liposarcoma namespace: FANTOM is_a: DOID:3939 ! lipomatous cancer [Term] id: DOID:3394 name: ischemic heart disease namespace: FANTOM is_a: DOID:3978 ! extrinsic cardiomyopathy [Term] id: DOID:3451 name: skin carcinoma namespace: FANTOM is_a: DOID:4159 ! skin cancer [Term] id: DOID:3493 name: signet ring cell adenocarcinoma namespace: FANTOM is_a: DOID:299 ! adenocarcinoma [Term] id: DOID:3498 name: pancreatic ductal adenocarcinoma namespace: FANTOM is_a: DOID:4074 ! pancreas adenocarcinoma [Term] id: DOID:3565 name: meningioma namespace: FANTOM is_a: DOID:3620 ! central nervous system cancer [Term] id: DOID:3571 name: liver cancer namespace: FANTOM is_a: DOID:3119 ! gastrointestinal system cancer [Term] id: DOID:3594 name: choriocarcinoma namespace: FANTOM is_a: DOID:2021 ! placenta cancer [Term] id: DOID:3603 name: mucinous cystadenocarcinoma namespace: FANTOM is_a: DOID:3111 ! cystadenocarcinoma [Term] id: DOID:3620 name: central nervous system cancer namespace: FANTOM is_a: DOID:3093 ! nervous system cancer [Term] id: DOID:363 name: uterine cancer namespace: FANTOM is_a: DOID:120 ! female reproductive organ cancer [Term] id: DOID:3717 name: gastric adenocarcinoma namespace: FANTOM is_a: DOID:5517 ! stomach carcinoma [Term] id: DOID:3856 name: male reproductive organ cancer namespace: FANTOM is_a: DOID:193 ! reproductive organ cancer [Term] id: DOID:3904 name: bronchogenic carcinoma namespace: FANTOM is_a: DOID:1325 ! bronchus cancer [Term] id: DOID:3905 name: lung carcinoma namespace: FANTOM is_a: DOID:1324 ! lung cancer [Term] id: DOID:3908 name: non-small cell lung carcinoma namespace: FANTOM is_a: DOID:3905 ! lung carcinoma [Term] id: DOID:3910 name: lung adenocarcinoma namespace: FANTOM is_a: DOID:3908 ! non-small cell lung carcinoma [Term] id: DOID:3939 name: lipomatous cancer namespace: FANTOM is_a: DOID:201 ! connective tissue cancer [Term] id: DOID:3978 name: extrinsic cardiomyopathy namespace: FANTOM is_a: DOID:0050700 ! cardiomyopathy [Term] id: DOID:3996 name: urinary system cancer namespace: FANTOM is_a: DOID:0050686 ! organ system cancer [Term] id: DOID:4 name: disease namespace: FANTOM [Term] id: DOID:4043 name: skeletal muscle cancer namespace: FANTOM is_a: DOID:4045 ! muscle cancer [Term] id: DOID:4045 name: muscle cancer namespace: FANTOM is_a: DOID:0060100 ! musculoskeletal system cancer [Term] id: DOID:4074 name: pancreas adenocarcinoma namespace: FANTOM is_a: DOID:4905 ! pancreatic carcinoma [Term] id: DOID:4159 name: skin cancer namespace: FANTOM is_a: DOID:0060122 ! integumentary system cancer [Term] id: DOID:423 name: myopathy namespace: FANTOM is_a: DOID:66 ! muscle tissue disease [Term] id: DOID:4230 name: smooth muscle cancer namespace: FANTOM is_a: DOID:4045 ! muscle cancer [Term] id: DOID:4231 name: histiocytoma namespace: FANTOM is_a: DOID:201 ! connective tissue cancer [Term] id: DOID:4235 name: spindle cell sarcoma namespace: FANTOM is_a: DOID:1115 ! sarcoma [Term] id: DOID:4236 name: carcinosarcoma namespace: FANTOM is_a: DOID:154 ! mixed cell type cancer [Term] id: DOID:4305 name: bone giant cell tumor namespace: FANTOM is_a: DOID:200 ! giant cell tumor [Term] id: DOID:4362 name: cervical cancer namespace: FANTOM is_a: DOID:120 ! female reproductive organ cancer [Term] id: DOID:440 name: neuromuscular disease namespace: FANTOM is_a: DOID:423 ! myopathy is_a: DOID:870 ! neuropathy [Term] id: DOID:4430 name: somatostatinoma namespace: FANTOM is_a: DOID:169 ! neuroendocrine tumor [Term] id: DOID:4468 name: clear cell adenocarcinoma namespace: FANTOM is_a: DOID:299 ! adenocarcinoma [Term] id: DOID:450 name: myotonic disease namespace: FANTOM is_a: DOID:423 ! myopathy [Term] id: DOID:4549 name: extraosseous chondrosarcoma namespace: FANTOM is_a: DOID:3371 ! chondrosarcoma [Term] id: DOID:4556 name: lung large cell carcinoma namespace: FANTOM is_a: DOID:3908 ! non-small cell lung carcinoma [Term] id: DOID:4645 name: retinal cancer namespace: FANTOM is_a: DOID:2174 ! ocular cancer is_a: DOID:5679 ! retinal disease [Term] id: DOID:4905 name: pancreatic carcinoma namespace: FANTOM is_a: DOID:1793 ! pancreatic cancer [Term] id: DOID:4929 name: tubular adenocarcinoma namespace: FANTOM is_a: DOID:299 ! adenocarcinoma [Term] id: DOID:4960 name: bone marrow cancer namespace: FANTOM is_a: DOID:2531 ! hematologic cancer [Term] id: DOID:5093 name: thoracic cancer namespace: FANTOM is_a: DOID:0050686 ! organ system cancer [Term] id: DOID:5409 name: lung small cell carcinoma namespace: FANTOM is_a: DOID:3905 ! lung carcinoma [Term] id: DOID:5517 name: stomach carcinoma namespace: FANTOM is_a: DOID:10534 ! stomach cancer [Term] id: DOID:5614 name: eye disease namespace: FANTOM is_a: DOID:1242 ! globe disease [Term] id: DOID:5662 name: pleomorphic carcinoma namespace: FANTOM is_a: DOID:305 ! carcinoma [Term] id: DOID:5672 name: large intestine cancer namespace: FANTOM is_a: DOID:10155 ! intestinal cancer [Term] id: DOID:5679 name: retinal disease namespace: FANTOM is_a: DOID:5614 ! eye disease [Term] id: DOID:5844 name: myocardial infarction namespace: FANTOM is_a: DOID:3394 ! ischemic heart disease [Term] id: DOID:5861 name: myxoid chondrosarcoma namespace: FANTOM is_a: DOID:3371 ! chondrosarcoma [Term] id: DOID:6193 name: epithelioid sarcoma namespace: FANTOM is_a: DOID:3350 ! mesenchymal cell neoplasm [Term] id: DOID:630 name: genetic disease namespace: FANTOM is_a: DOID:4 ! disease [Term] id: DOID:6496 name: extraskeletal myxoid chondrosarcoma namespace: FANTOM is_a: DOID:4549 ! extraosseous chondrosarcoma is_a: DOID:5861 ! myxoid chondrosarcoma [Term] id: DOID:66 name: muscle tissue disease namespace: FANTOM is_a: DOID:0080000 ! muscular disease [Term] id: DOID:684 name: hepatocellular carcinoma namespace: FANTOM is_a: DOID:686 ! liver carcinoma [Term] id: DOID:686 name: liver carcinoma namespace: FANTOM is_a: DOID:3571 ! liver cancer [Term] id: DOID:687 name: hepatoblastoma namespace: FANTOM is_a: DOID:3571 ! liver cancer [Term] id: DOID:7 name: disease of anatomical entity namespace: FANTOM is_a: DOID:4 ! disease [Term] id: DOID:706 name: mature B-cell neoplasm namespace: FANTOM is_a: DOID:707 ! B-cell lymphocytic neoplasm [Term] id: DOID:707 name: B-cell lymphocytic neoplasm namespace: FANTOM is_a: DOID:0060058 ! lymphoma [Term] id: DOID:74 name: hematopoietic system disease namespace: FANTOM is_a: DOID:2914 ! immune system disease [Term] id: DOID:768 name: retinoblastoma namespace: FANTOM is_a: DOID:771 ! retinal cell cancer [Term] id: DOID:771 name: retinal cell cancer namespace: FANTOM is_a: DOID:4645 ! retinal cancer [Term] id: DOID:8469 name: influenza namespace: FANTOM is_a: DOID:934 ! viral infectious disease [Term] id: DOID:8552 name: chronic myeloid leukemia namespace: FANTOM is_a: DOID:8692 ! myeloid leukemia [Term] id: DOID:8584 name: Burkitt's lymphoma namespace: FANTOM is_a: DOID:706 ! mature B-cell neoplasm [Term] id: DOID:8618 name: oral cavity cancer namespace: FANTOM is_a: DOID:3119 ! gastrointestinal system cancer [Term] id: DOID:863 name: nervous system disease namespace: FANTOM is_a: DOID:7 ! disease of anatomical entity [Term] id: DOID:8649 name: tongue cancer namespace: FANTOM is_a: DOID:8618 ! oral cavity cancer [Term] id: DOID:8675 name: lymphosarcoma namespace: FANTOM is_a: DOID:0060073 ! lymphatic system cancer [Term] id: DOID:8691 name: mycosis fungoides namespace: FANTOM is_a: DOID:0060061 ! cutaneous T cell lymphoma [Term] id: DOID:8692 name: myeloid leukemia namespace: FANTOM is_a: DOID:1240 ! leukemia [Term] id: DOID:870 name: neuropathy namespace: FANTOM is_a: DOID:863 ! nervous system disease [Term] id: DOID:9119 name: acute myeloid leukemia namespace: FANTOM is_a: DOID:8692 ! myeloid leukemia [Term] id: DOID:913 name: atrophic muscular disease namespace: FANTOM is_a: DOID:440 ! neuromuscular disease [Term] id: DOID:9256 name: colorectal cancer namespace: FANTOM is_a: DOID:5672 ! large intestine cancer [Term] id: DOID:934 name: viral infectious disease namespace: FANTOM is_a: DOID:0050117 ! disease by infectious agent [Term] id: DOID:9597 name: Krukenberg carcinoma namespace: FANTOM is_a: DOID:2152 ! ovary epithelial cancer [Term] id: DOID:962 name: neurofibroma namespace: FANTOM is_a: DOID:3193 ! peripheral nerve sheath neoplasm [Term] id: DOID:9884 name: muscular dystrophy namespace: FANTOM is_a: DOID:913 ! atrophic muscular disease [Term] id: EFO:0000001 name: experimental factor namespace: FANTOM [Term] id: EFO:0000324 name: cell type namespace: FANTOM is_a: MaterialEntity ! material entity [Term] id: EFO:0000369 name: compound based treatment namespace: FANTOM is_a: EFO:0000727 ! treatment [Term] id: EFO:0000602 name: BALB/c namespace: FANTOM is_a: NCBITaxon:10090 ! Mus musculus [Term] id: EFO:0000606 name: C57BL/6J namespace: FANTOM is_a: EFO:0005181 ! C57BL [Term] id: EFO:0000683 name: replicate namespace: FANTOM is_a: Role ! role [Term] id: EFO:0000727 name: treatment namespace: FANTOM is_a: EFO:0002694 ! experimental process [Term] id: EFO:0001426 name: study design namespace: FANTOM is_a: OBI:0000272 ! protocol [Term] id: EFO:0001461 name: control namespace: FANTOM is_a: Role ! role [Term] id: EFO:0001746 name: development or differentiation design namespace: FANTOM is_a: EFO:0004667 ! biological variation design [Term] id: EFO:0002090 name: technical replicate namespace: FANTOM is_a: EFO:0000683 ! replicate [Term] id: EFO:0002091 name: biological replicate namespace: FANTOM is_a: EFO:0000683 ! replicate [Term] id: EFO:0002694 name: experimental process namespace: FANTOM is_a: EFO:0004542 ! planned process [Term] id: EFO:0004542 name: planned process namespace: FANTOM is_a: ProcessualEntity ! process [Term] id: EFO:0004667 name: biological variation design namespace: FANTOM is_a: EFO:0001426 ! study design [Term] id: EFO:0005181 name: C57BL namespace: FANTOM is_a: NCBITaxon:10090 ! Mus musculus [Term] id: FF:0000001 name: sample namespace: FANTOM5 def: "Root Term for the FANTOM5 sample ontology. Should only be viewed by FANTOM5 consortium members until one year after data freeze (~June 2012)." [GOC:tfm] synonym: "FANTOM5 Sample" EXACT [] [Term] id: FF:0000002 name: in vivo cell sample namespace: FANTOM5 def: "A sample consisting of in vivo cell material.nNOTE: The distinction between a primary cell line sample and in vivo cell sample may be difficult." [GOC:tfm] synonym: "in vivo cell" EXACT [] is_a: FF:0000102 ! sample by type disjoint_from: FF:0000003 ! cell line sample relationship: derives_from CL:0000003 ! native cell [Term] id: FF:0000003 name: cell line sample namespace: FANTOM5 def: "A sample consisting of cell line material." [GOC:tfm] synonym: "cell line" EXACT [] is_a: FF:0000102 ! sample by type disjoint_from: FF:0000004 ! tissue sample [Term] id: FF:0000004 name: tissue sample namespace: FANTOM5 def: "A sample consisting of tissue material." [GOC:tfm] synonym: "tissue" EXACT [] is_a: FF:0000102 ! sample by type relationship: derives_from UBERON:0000479 ! tissue [Term] id: FF:0000009 name: human amniotic epithelial cell sample namespace: FANTOM5 synonym: "amniotic epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002536 ! amniotic epithelial cell relationship: derives_from CL:0002536 ! amniotic epithelial cell [Term] id: FF:0000010 name: human amniotic membrane cell- Amnion sample namespace: FANTOM5 def: "From the company Amnion." [GOC:tfm] synonym: "amniotic membrane cell- Amnion" EXACT [] is_a: FF:0000092 ! human amniotic membrane cell sample relationship: derives_from UBERON:0000305 ! amnion [Term] id: FF:0000011 name: human subcutaneous adipocyte sample namespace: FANTOM5 synonym: "subcutaneous adipocyte" EXACT [] is_a: FF:0000266 ! human mature adipocyte sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002521 ! subcutaneous fat cell relationship: derives_from CL:0002521 ! subcutaneous fat cell [Term] id: FF:0000012 name: human alveolar epithelial cell sample namespace: FANTOM5 synonym: "alveolar epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000322 ! pneumocyte relationship: derives_from CL:0000322 ! pneumocyte [Term] id: FF:0000013 name: human basophil sample namespace: FANTOM5 synonym: "basophil" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000767 ! basophil relationship: derives_from CL:0000767 ! basophil [Term] id: FF:0000015 name: human bronchial epithelial cell sample namespace: FANTOM5 synonym: "bronchial epithelial cell" EXACT [] is_a: FF:0000166 ! human small airway epithelial cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002328 ! bronchial epithelial cell relationship: derives_from CL:0002328 ! bronchial epithelial cell [Term] id: FF:0000020 name: human CD133-positive progenitor cell- bone marrow derived sample namespace: FANTOM5 synonym: "CD133-positive progenitor cell- bone marrow derived" EXACT [] is_a: FF:0000027 ! human CD133-positive hematopoeitic stem cell sample intersection_of: FF:0000027 ! human CD133-positive hematopoeitic stem cell sample intersection_of: derives_from CL:0002092 ! bone marrow cell relationship: derives_from CL:0002092 ! bone marrow cell [Term] id: FF:0000021 name: hematopoietic stem cell sample namespace: FANTOM5 def: "A FANTOM5 class to represent all hematpoeitic stem cell samples." [GOC:tfm] synonym: "hematopoietic stem cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: derives_from CL:0000037 ! hematopoietic stem cell relationship: derives_from CL:0000037 ! hematopoietic stem cell [Term] id: FF:0000022 name: human CD133-positive stem cell - cord blood derived sample namespace: FANTOM5 synonym: "CD133-positive stem cell - cord blood derived" EXACT [] is_a: FF:0000027 ! human CD133-positive hematopoeitic stem cell sample intersection_of: FF:0000027 ! human CD133-positive hematopoeitic stem cell sample intersection_of: derives_from UBERON:0012168 ! umbilical cord blood relationship: derives_from UBERON:0012168 ! umbilical cord blood [Term] id: FF:0000024 name: human CD14-positive monocyte sample namespace: FANTOM5 synonym: "CD14-positive monocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample relationship: derives_from CL:0000576 ! monocyte [Term] id: FF:0000025 name: CD19-positive B cell sample namespace: FANTOM5 synonym: "CD19-positive B cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample relationship: derives_from CL:0000236 ! B cell [Term] id: FF:0000026 name: human CD34-positive hematopoietic stem cell sample namespace: FANTOM5 synonym: "CD34-positive hematopoietic stem cell" EXACT [] is_a: FF:0000021 ! hematopoietic stem cell sample is_a: FF:0000210 ! human sample [Term] id: FF:0000027 name: human CD133-positive hematopoeitic stem cell sample namespace: FANTOM5 synonym: "CD133-positive hematopoeitic stem cell" EXACT [] is_a: FF:0000021 ! hematopoietic stem cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000021 ! hematopoietic stem cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0001024 ! CD34-positive, CD38-negative hematopoietic stem cell relationship: derives_from CL:0001024 ! CD34-positive, CD38-negative hematopoietic stem cell [Term] id: FF:0000030 name: CD8-positive T cell sample namespace: FANTOM5 synonym: "CD8-positive T cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: derives_from CL:0000625 ! CD8-positive, alpha-beta T cell relationship: derives_from CL:0000625 ! CD8-positive, alpha-beta T cell [Term] id: FF:0000031 name: CD4-positive T cell sample namespace: FANTOM5 synonym: "CD4-positive T cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: derives_from CL:0000624 ! CD4-positive, alpha-beta T cell relationship: derives_from CL:0000624 ! CD4-positive, alpha-beta T cell [Term] id: FF:0000037 name: human chondrocyte sample namespace: FANTOM5 synonym: "chondrocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000138 ! chondrocyte relationship: derives_from CL:0000138 ! chondrocyte [Term] id: FF:0000038 name: human chorionic membrane stem cell sample namespace: FANTOM5 synonym: "chorionic membrane stem cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002541 ! chorionic membrane mesenchymal stem cell relationship: derives_from CL:0002541 ! chorionic membrane mesenchymal stem cell relationship: derives_from UBERON:0000920 ! egg chorion [Term] id: FF:0000039 name: human adipocyte of omentum tissue sample namespace: FANTOM5 synonym: "adipocyte of omentum tissue" EXACT [] is_a: FF:0000266 ! human mature adipocyte sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002615 ! adipocyte of omentum tissue relationship: derives_from CL:0002615 ! adipocyte of omentum tissue [Term] id: FF:0000040 name: human ciliary epithelial cell sample namespace: FANTOM5 synonym: "ciliary epithelial cell" EXACT [] synonym: "non-pigmented ciliary epithelial cell sample" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002304 ! non-pigmented ciliary epithelial cell relationship: derives_from CL:0002304 ! non-pigmented ciliary epithelial cell [Term] id: FF:0000041 name: common myeloid progenitor sample namespace: FANTOM5 synonym: "common myeloid progenitor" EXACT [] is_a: FF:0000002 ! in vivo cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: derives_from CL:0000049 ! common myeloid progenitor relationship: derives_from CL:0000049 ! common myeloid progenitor [Term] id: FF:0000043 name: human corneal epithelial cell sample namespace: FANTOM5 synonym: "corneal epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000575 ! corneal epithelial cell relationship: derives_from CL:0000575 ! corneal epithelial cell [Term] id: FF:0000044 name: human monocyte immature derived dendritic cell sample namespace: FANTOM5 synonym: "monocyte immature derived dendritic cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000576 ! monocyte intersection_of: derives_from CL:0000840 ! immature conventional dendritic cell relationship: derives_from CL:0000576 ! monocyte relationship: derives_from CL:0000840 ! immature conventional dendritic cell [Term] id: FF:0000045 name: human plasmacytoid dendritic cell sample namespace: FANTOM5 synonym: "plasmacytoid dendritic cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000784 ! plasmacytoid dendritic cell relationship: derives_from CL:0000784 ! plasmacytoid dendritic cell [Term] id: FF:0000046 name: human endothelial cell sample namespace: FANTOM5 synonym: "endothelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000115 ! endothelial cell relationship: derives_from CL:0000115 ! endothelial cell [Term] id: FF:0000047 name: human endothelial cell of the artery sample namespace: FANTOM5 synonym: "endothelial cell of the artery" EXACT [] is_a: FF:0000046 ! human endothelial cell sample intersection_of: FF:0000046 ! human endothelial cell sample intersection_of: derives_from CL:1000413 ! endothelial cell of artery relationship: derives_from CL:1000413 ! endothelial cell of artery [Term] id: FF:0000048 name: human endothelial cell of the aorta sample namespace: FANTOM5 synonym: "endothelial cell of the aorta" EXACT [] is_a: FF:0000047 ! human endothelial cell of the artery sample intersection_of: FF:0000047 ! human endothelial cell of the artery sample intersection_of: derives_from CL:0002544 ! aortic endothelial cell relationship: derives_from CL:0002544 ! aortic endothelial cell [Term] id: FF:0000049 name: human lymphatic endothelial cell sample namespace: FANTOM5 synonym: "lymphatic endothelial cell" EXACT [] is_a: FF:0000046 ! human endothelial cell sample intersection_of: FF:0000046 ! human endothelial cell sample intersection_of: derives_from CL:0002138 ! endothelial cell of lymphatic vessel relationship: derives_from CL:0002138 ! endothelial cell of lymphatic vessel [Term] id: FF:0000050 name: human microvascular endothelial cell sample namespace: FANTOM5 synonym: "microvascular endothelial cell" EXACT [] is_a: FF:0000046 ! human endothelial cell sample intersection_of: FF:0000046 ! human endothelial cell sample intersection_of: derives_from CL:0002144 ! capillary endothelial cell relationship: derives_from CL:0002144 ! capillary endothelial cell [Term] id: FF:0000051 name: human thoracic endothelial cell sample namespace: FANTOM5 synonym: "thoracic endothelial cell" EXACT [] is_a: FF:0000048 ! human endothelial cell of the aorta sample intersection_of: FF:0000048 ! human endothelial cell of the aorta sample intersection_of: derives_from CL:0002545 ! thoracic aorta endothelial cell relationship: derives_from CL:0002545 ! thoracic aorta endothelial cell [Term] id: FF:0000052 name: human endothelial cell of the vein sample namespace: FANTOM5 synonym: "endothelial cell of the vein" EXACT [] is_a: FF:0000046 ! human endothelial cell sample intersection_of: FF:0000046 ! human endothelial cell sample intersection_of: derives_from CL:0002543 ! vein endothelial cell relationship: derives_from CL:0002543 ! vein endothelial cell [Term] id: FF:0000054 name: human eosinophil sample namespace: FANTOM5 synonym: "eosinophil" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000771 ! eosinophil relationship: derives_from CL:0000771 ! eosinophil [Term] id: FF:0000056 name: human epithelial cell of esophagus sample namespace: FANTOM5 synonym: "epithelial cell of esophagus" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002252 ! epithelial cell of esophagus relationship: derives_from CL:0002252 ! epithelial cell of esophagus [Term] id: FF:0000057 name: fibroblast sample namespace: FANTOM5 synonym: "fibroblast" EXACT [] is_a: FF:0000002 ! in vivo cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: derives_from CL:0000057 ! fibroblast relationship: derives_from CL:0000057 ! fibroblast [Term] id: FF:0000058 name: human fibroblast of the aortic adventitia sample namespace: FANTOM5 synonym: "fibroblast of the aortic adventitia" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000210 ! human sample intersection_of: FF:0000057 ! fibroblast sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002547 ! fibroblast of the aortic adventitia relationship: derives_from CL:0002547 ! fibroblast of the aortic adventitia [Term] id: FF:0000059 name: human cardiac fibroblast sample namespace: FANTOM5 alt_id: FF:0104974 def: "A fibroblast from cardiac tissue." [GOC:tfm] synonym: "cardiac fibroblast" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000210 ! human sample intersection_of: FF:0000057 ! fibroblast sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002548 ! cardiac fibroblast relationship: derives_from CL:0002548 ! cardiac fibroblast [Term] id: FF:0000060 name: human fibroblast of choroid plexus sample namespace: FANTOM5 synonym: "fibroblast of choroid plexus" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000210 ! human sample intersection_of: FF:0000057 ! fibroblast sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002549 ! fibroblast of choroid plexus relationship: derives_from CL:0002549 ! fibroblast of choroid plexus [Term] id: FF:0000061 name: human fibroblast of conjuctivia sample namespace: FANTOM5 synonym: "fibroblast of conjuctivia" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000210 ! human sample intersection_of: FF:0000057 ! fibroblast sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002550 ! fibroblast of the conjuctiva relationship: derives_from CL:0002550 ! fibroblast of the conjuctiva [Term] id: FF:0000062 name: human dermal fibroblast sample namespace: FANTOM5 synonym: "dermal fibroblast" EXACT [] is_a: FF:0000250 ! human fibroblast of skin sample intersection_of: FF:0000250 ! human fibroblast of skin sample intersection_of: derives_from CL:0002551 ! fibroblast of dermis relationship: derives_from CL:0002551 ! fibroblast of dermis [Term] id: FF:0000063 name: human fibroblast of gingiva sample namespace: FANTOM5 synonym: "fibroblast of gingiva" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000210 ! human sample intersection_of: FF:0000057 ! fibroblast sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002552 ! fibroblast of gingiva relationship: derives_from CL:0002552 ! fibroblast of gingiva [Term] id: FF:0000064 name: human fibroblast of lung sample namespace: FANTOM5 synonym: "fibroblast of lung" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000210 ! human sample intersection_of: FF:0000057 ! fibroblast sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002553 ! lung fibroblast relationship: derives_from CL:0002553 ! lung fibroblast [Term] id: FF:0000065 name: human fibroblast of lymphatic vessel sample namespace: FANTOM5 synonym: "fibroblast of lymphatic vessel" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000210 ! human sample intersection_of: FF:0000057 ! fibroblast sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002554 ! fibroblast of lymphatic vessel relationship: derives_from CL:0002554 ! fibroblast of lymphatic vessel [Term] id: FF:0000066 name: human fibroblast of mammary gland sample namespace: FANTOM5 synonym: "fibroblast of mammary gland" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000210 ! human sample intersection_of: FF:0000057 ! fibroblast sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002555 ! fibroblast of mammary gland relationship: derives_from CL:0002555 ! fibroblast of mammary gland [Term] id: FF:0000067 name: human fibroblast of periodontium sample namespace: FANTOM5 synonym: "fibroblast of periodontium" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000210 ! human sample intersection_of: FF:0000057 ! fibroblast sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002556 ! fibroblast of periodontium relationship: derives_from CL:0002556 ! fibroblast of periodontium [Term] id: FF:0000068 name: human fibroblast of pulmonary artery sample namespace: FANTOM5 synonym: "fibroblast of pulmonary artery" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000210 ! human sample intersection_of: FF:0000057 ! fibroblast sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002557 ! fibroblast of pulmonary artery relationship: derives_from CL:0002557 ! fibroblast of pulmonary artery [Term] id: FF:0000069 name: human fibroblast of villous mesenchyme sample namespace: FANTOM5 synonym: "fibroblast of villous mesenchyme" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000210 ! human sample intersection_of: FF:0000057 ! fibroblast sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002558 ! fibroblast of villous mesenchyme relationship: derives_from CL:0002558 ! fibroblast of villous mesenchyme [Term] id: FF:0000070 name: granulocyte macrophage progenitor cell sample namespace: FANTOM5 synonym: "granulocyte macrophage progenitor cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: derives_from CL:0000557 ! granulocyte monocyte progenitor cell relationship: derives_from CL:0000557 ! granulocyte monocyte progenitor cell [Term] id: FF:0000071 name: human hair follicle dermal papilla cell sample namespace: FANTOM5 synonym: "hair follicle dermal papilla cell" EXACT [] is_a: FF:0000072 ! human hair follicle cell sample intersection_of: FF:0000072 ! human hair follicle cell sample intersection_of: derives_from CL:0000346 ! hair follicle dermal papilla cell relationship: derives_from CL:0000346 ! hair follicle dermal papilla cell relationship: derives_from CL:1000428 ! stem cell of epidermis [Term] id: FF:0000072 name: human hair follicle cell sample namespace: FANTOM5 synonym: "hair follicle cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002559 ! hair follicle cell relationship: derives_from CL:0002559 ! hair follicle cell [Term] id: FF:0000075 name: human outer root sheath cell sample namespace: FANTOM5 synonym: "outer root sheath cell" EXACT [] is_a: FF:0000072 ! human hair follicle cell sample intersection_of: FF:0000072 ! human hair follicle cell sample intersection_of: derives_from CL:0002561 ! outer root sheath cell relationship: derives_from CL:0002561 ! outer root sheath cell [Term] id: FF:0000076 name: hepatic sinusoidal endothelial cell sample namespace: FANTOM5 synonym: "hepatic sinusoidal endothelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: derives_from CL:1000398 ! endothelial cell of hepatic sinusoid intersection_of: derives_from UBERON:0001281 ! hepatic sinusoid relationship: derives_from CL:1000398 ! endothelial cell of hepatic sinusoid relationship: derives_from UBERON:0001281 ! hepatic sinusoid [Term] id: FF:0000077 name: hepatic stellate cell sample namespace: FANTOM5 synonym: "hepatic stellate cell" EXACT [] is_a: FF:0000057 ! fibroblast sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: derives_from CL:0000632 ! hepatic stellate cell relationship: derives_from CL:0000632 ! hepatic stellate cell [Term] id: FF:0000078 name: human hepatocyte sample namespace: FANTOM5 synonym: "human hepatocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000182 ! hepatocyte relationship: derives_from CL:0000182 ! hepatocyte [Term] id: FF:0000079 name: mouse Lgr5-positive intestinal epithelial stem cell sample namespace: FANTOM5 synonym: "Lgr5-positive intestinal epithelial stem cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample relationship: derives_from CL:0002250 ! intestinal crypt stem cell [Term] id: FF:0000080 name: human intestinal epithelial cell sample namespace: FANTOM5 synonym: "intestinal epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002563 ! intestinal epithelial cell relationship: derives_from CL:0002563 ! intestinal epithelial cell [Term] id: FF:0000081 name: human iris pigment epithelial cell sample namespace: FANTOM5 synonym: "iris pigment epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002565 ! iris pigment epithelial cell relationship: derives_from CL:0002565 ! iris pigment epithelial cell [Term] id: FF:0000082 name: human epidermal keratinocyte sample namespace: FANTOM5 synonym: "epidermal keratinocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000312 ! keratinocyte relationship: derives_from CL:0000312 ! keratinocyte [Term] id: FF:0000083 name: human oral mucosa keratinocyte sample namespace: FANTOM5 synonym: "oral mucosa keratinocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002170 ! keratinized cell of the oral mucosa relationship: derives_from CL:0002170 ! keratinized cell of the oral mucosa relationship: derives_from UBERON:0003729 ! mouth mucosa [Term] id: FF:0000084 name: human keratocyte sample namespace: FANTOM5 synonym: "keratocyte" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002363 ! keratocyte relationship: derives_from CL:0002363 ! keratocyte [Term] id: FF:0000085 name: human lens epithelial cell sample namespace: FANTOM5 synonym: "lens epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002224 ! lens epithelial cell relationship: derives_from CL:0002224 ! lens epithelial cell [Term] id: FF:0000086 name: human macrophage sample namespace: FANTOM5 synonym: "macrophage" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000235 ! macrophage relationship: derives_from CL:0000235 ! macrophage [Term] id: FF:0000087 name: human Malassez derived epithelial cell sample namespace: FANTOM5 synonym: "Malassez derived epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002166 ! epithelial cell of Malassez relationship: derives_from CL:0002166 ! epithelial cell of Malassez [Term] id: FF:0000088 name: human mammary epithelial cell sample namespace: FANTOM5 synonym: "mammary epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002327 ! mammary epithelial cell relationship: derives_from CL:0002327 ! mammary epithelial cell [Term] id: FF:0000089 name: human dark melanocyte sample namespace: FANTOM5 synonym: "dark melanocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002566 ! dark melanocyte relationship: derives_from CL:0002566 ! dark melanocyte [Term] id: FF:0000090 name: human light melanocyte sample namespace: FANTOM5 synonym: "light melanocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002567 ! light melanocyte relationship: derives_from CL:0002567 ! light melanocyte [Term] id: FF:0000091 name: human leptomeningeal cell sample namespace: FANTOM5 synonym: "leptomeningeal cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000708 ! leptomeningeal cell relationship: derives_from CL:0000708 ! leptomeningeal cell [Term] id: FF:0000092 name: human amniotic membrane cell sample namespace: FANTOM5 synonym: "amniotic membrane cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002537 ! amnion mesenchymal stem cell relationship: derives_from CL:0002537 ! amnion mesenchymal stem cell [Term] id: FF:0000093 name: human vertebral mesenchymal stem cell sample namespace: FANTOM5 synonym: "vertebral mesenchymal stem cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002572 ! vertebral mesenchymal stem cell relationship: derives_from CL:0002572 ! vertebral mesenchymal stem cell [Term] id: FF:0000094 name: human mesenchymal stem cell of umbilical cord-Sciencell sample namespace: FANTOM5 def: "A mesenchymal stem cell of umibilical cord provided by Sciencell(7535)." [GOC:tfm] synonym: "mesenchymal stem cell of umbilical cord-Sciencell" EXACT [] is_a: FF:0000117 ! human mesenchymal stem cell of umbilical cord blood sample relationship: derives_from CL:0002569 ! mesenchymal stem cell of umbilical cord [Term] id: FF:0000095 name: human mesenchymal stem cell of Wharton's jelly sample namespace: FANTOM5 synonym: "mesenchymal stem cell of Wharton's jelly" EXACT [] is_a: FF:0000094 ! human mesenchymal stem cell of umbilical cord-Sciencell sample intersection_of: FF:0000094 ! human mesenchymal stem cell of umbilical cord-Sciencell sample intersection_of: derives_from CL:0002568 ! mesenchymal stem cell of Wharton's jelly relationship: derives_from CL:0002568 ! mesenchymal stem cell of Wharton's jelly [Term] id: FF:0000096 name: human mesenchymal stem cell of adipose sample namespace: FANTOM5 synonym: "mesenchymal stem cell of adipose" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002570 ! mesenchymal stem cell of adipose relationship: derives_from CL:0002570 ! mesenchymal stem cell of adipose [Term] id: FF:0000097 name: human mesenchymal stem cell of bone marrow sample namespace: FANTOM5 synonym: "human mesenchymal stem cell of bone marrow" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002540 ! mesenchymal stem cell of the bone marrow relationship: derives_from CL:0002540 ! mesenchymal stem cell of the bone marrow [Term] id: FF:0000098 name: human hepatic mesenchymal stem cell sample namespace: FANTOM5 synonym: "hepatic mesenchymal stem cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002571 ! hepatic mesenchymal stem cell relationship: derives_from CL:0002571 ! hepatic mesenchymal stem cell [Term] id: FF:0000099 name: human mesothelial cell sample namespace: FANTOM5 synonym: "mesothelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000077 ! mesothelial cell relationship: derives_from CL:0000077 ! mesothelial cell [Term] id: FF:0000101 name: sample by species namespace: FANTOM5 def: "A sample identified by the species it was isolated from." [GOC:tfm] is_a: FF:0000001 ! sample [Term] id: FF:0000102 name: sample by type namespace: FANTOM5 def: "A sample identified by whether its a tissue, a cell-line, or a cell type isolated in vivo." [] is_a: FF:0000001 ! sample [Term] id: FF:0000103 name: mouse sample namespace: FANTOM5 def: "A sample consisting of material from a mouse." [GOC:tfm] synonym: "mouse" EXACT [] synonym: "mus" RELATED [] is_a: FF:0000101 ! sample by species intersection_of: FF:0000101 ! sample by species intersection_of: derives_from NCBITaxon:10090 ! Mus musculus disjoint_from: FF:0000210 ! human sample relationship: derives_from NCBITaxon:10090 ! Mus musculus [Term] id: FF:0000104 name: mouse aortic smooth muscle cell sample namespace: FANTOM5 synonym: "mouse aortic smooth muscle cell" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000167 ! smooth muscle cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0002539 ! aortic smooth muscle cell relationship: derives_from CL:0002539 ! aortic smooth muscle cell [Term] id: FF:0000105 name: mouse astrocyte sample namespace: FANTOM5 synonym: "mouse astrocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0000127 ! astrocyte relationship: derives_from CL:0000127 ! astrocyte [Term] id: FF:0000106 name: mouse cardiac myocyte sample namespace: FANTOM5 synonym: "mouse cardiac myocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0000746 ! cardiac muscle cell relationship: derives_from CL:0000746 ! cardiac muscle cell [Term] id: FF:0000107 name: mouse embryonic fibroblast sample namespace: FANTOM5 def: "A cell type derived from culturing early stage mouse embryos. Not clear if this cell type exists in vivo, so for now will reference higher level fibroblasts." [GOC:tfm] synonym: "mouse embryonic fibroblast" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000103 ! mouse sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0000057 ! fibroblast relationship: derives_from CL:0000057 ! fibroblast [Term] id: FF:0000108 name: mouse granule cell sample namespace: FANTOM5 synonym: "mouse granule cell" EXACT [] is_a: FF:0000203 ! mouse neuron samples intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0000120 ! granule cell relationship: derives_from CL:0000120 ! granule cell [Term] id: FF:0000109 name: mouse hepatocyte sample namespace: FANTOM5 synonym: "mouse hepatocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0000182 ! hepatocyte relationship: derives_from CL:0000182 ! hepatocyte [Term] id: FF:0000111 name: mouse leptomeningeal cell sample namespace: FANTOM5 synonym: "mouse leptomeningeal cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0000708 ! leptomeningeal cell relationship: derives_from CL:0000708 ! leptomeningeal cell [Term] id: FF:0000112 name: mouse mesenchymal stem cell of bone marrow sample namespace: FANTOM5 synonym: "mouse mesenchymal stem cell of bone marrow" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0002540 ! mesenchymal stem cell of the bone marrow relationship: derives_from CL:0002540 ! mesenchymal stem cell of the bone marrow [Term] id: FF:0000113 name: mouse microglial cell sample namespace: FANTOM5 synonym: "mouse microglial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0000129 ! microglial cell relationship: derives_from CL:0000129 ! microglial cell [Term] id: FF:0000116 name: mouse Schwann cell sample namespace: FANTOM5 synonym: "mouse Schwann cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0002573 ! Schwann cell relationship: derives_from CL:0002573 ! Schwann cell [Term] id: FF:0000117 name: human mesenchymal stem cell of umbilical cord blood sample namespace: FANTOM5 def: "A mesenchymal stem cell of umibilical cord blood provided by CET(Thermoscientific HMpC-500)." [GOC:tfm] synonym: "mesenchymal stem cell of umbilical cord blood" EXACT [] synonym: "Multipotent Cord Blood Unrestricted Somatic Stem Cell" RELATED [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002569 ! mesenchymal stem cell of umbilical cord relationship: derives_from CL:0002569 ! mesenchymal stem cell of umbilical cord [Term] id: FF:0000118 name: human cardiac myocyte sample namespace: FANTOM5 def: "Cardiac myocyte sample provided by Sciencell(6205)." [GOC:tfm] synonym: "cardiac myocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000746 ! cardiac muscle cell relationship: derives_from CL:0000746 ! cardiac muscle cell [Term] id: FF:0000119 name: human natural killer cell sample namespace: FANTOM5 synonym: "natural killer cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000623 ! natural killer cell relationship: derives_from CL:0000623 ! natural killer cell [Term] id: FF:0000120 name: human neural stem cell sample namespace: FANTOM5 synonym: "neural stem cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000047 ! neuronal stem cell relationship: derives_from CL:0000047 ! neuronal stem cell [Term] id: FF:0000122 name: human neutrophil sample namespace: FANTOM5 synonym: "neutrophil" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000775 ! neutrophil relationship: derives_from CL:0000775 ! neutrophil [Term] id: FF:0000123 name: human nucleus pulposus cell of intervertebral disc sample namespace: FANTOM5 synonym: "nucleus pulposus cell of intervertebral disc" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002564 ! nucleus pulposus cell of intervertebral disc relationship: derives_from CL:0002564 ! nucleus pulposus cell of intervertebral disc [Term] id: FF:0000124 name: human oligodendrocyte sample namespace: FANTOM5 synonym: "oligodendrocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000128 ! oligodendrocyte relationship: derives_from CL:0000128 ! oligodendrocyte [Term] id: FF:0000125 name: human oligodendrocyte precursor sample namespace: FANTOM5 synonym: "oligodendrocyte precursor" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002453 ! oligodendrocyte precursor cell relationship: derives_from CL:0002453 ! oligodendrocyte precursor cell [Term] id: FF:0000127 name: human osteoblast-Sciencell sample namespace: FANTOM5 synonym: "osteoblast-Sciencell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample relationship: derives_from CL:0000062 ! osteoblast [Term] id: FF:0000128 name: human osteoblast-Cell applications sample namespace: FANTOM5 synonym: "osteoblast-Cell applications" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample relationship: derives_from CL:0000062 ! osteoblast [Term] id: FF:0000133 name: human pericyte sample namespace: FANTOM5 synonym: "human CNS pericyte sample" EXACT [] synonym: "pericyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002575 ! central nervous system pericyte relationship: derives_from CL:0002575 ! central nervous system pericyte [Term] id: FF:0000134 name: human perineural cell sample namespace: FANTOM5 synonym: "perineural cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002576 ! perineural cell relationship: derives_from CL:0002576 ! perineural cell [Term] id: FF:0000135 name: human peripheral blood mononuclear cell sample namespace: FANTOM5 synonym: "peripheral blood mononuclear cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000842 ! mononuclear cell intersection_of: derives_from UBERON:0000178 ! blood relationship: derives_from CL:0000842 ! mononuclear cell relationship: derives_from UBERON:0000178 ! blood [Term] id: FF:0000136 name: human placental epithelial cell sample namespace: FANTOM5 synonym: "placental epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002577 ! placental epithelial cell relationship: derives_from CL:0002577 ! placental epithelial cell [Term] id: FF:0000137 name: human preadipocyte sample namespace: FANTOM5 synonym: "preadipocyte" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002334 ! preadipocyte relationship: derives_from CL:0002334 ! preadipocyte [Term] id: FF:0000139 name: human preadipocyte of the breast sample namespace: FANTOM5 synonym: "preadipocyte of the breast" EXACT [] is_a: FF:0000137 ! human preadipocyte sample intersection_of: FF:0000137 ! human preadipocyte sample intersection_of: derives_from CL:0002580 ! preadipocyte of the breast relationship: derives_from CL:0002580 ! preadipocyte of the breast [Term] id: FF:0000140 name: human omentum preadipocyte sample namespace: FANTOM5 synonym: "omentum preadipocyte" EXACT [] is_a: FF:0000137 ! human preadipocyte sample intersection_of: FF:0000137 ! human preadipocyte sample intersection_of: derives_from CL:0002579 ! omentum preadipocyte relationship: derives_from CL:0002579 ! omentum preadipocyte [Term] id: FF:0000141 name: human perirenal preadipocyte sample namespace: FANTOM5 synonym: "perirenal preadipocyte" EXACT [] is_a: FF:0000137 ! human preadipocyte sample intersection_of: FF:0000137 ! human preadipocyte sample intersection_of: derives_from CL:0002581 ! perirenal preadipocyte relationship: derives_from CL:0002581 ! perirenal preadipocyte [Term] id: FF:0000142 name: human subcutaneous preadipocyte sample namespace: FANTOM5 synonym: "subcutaneous preadipocyte" EXACT [] is_a: FF:0000137 ! human preadipocyte sample intersection_of: FF:0000137 ! human preadipocyte sample intersection_of: derives_from CL:0002583 ! subcutaneous preadipocyte relationship: derives_from CL:0002583 ! subcutaneous preadipocyte [Term] id: FF:0000143 name: human visceral preadipocyte sample namespace: FANTOM5 synonym: "visceral preadipocyte" EXACT [] is_a: FF:0000137 ! human preadipocyte sample intersection_of: FF:0000137 ! human preadipocyte sample intersection_of: derives_from CL:0002582 ! visceral preadipocyte relationship: derives_from CL:0002582 ! visceral preadipocyte [Term] id: FF:0000144 name: human promyelocyte/myelocyte sample namespace: FANTOM5 synonym: "promyelocyte/myelocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000836 ! promyelocyte intersection_of: derives_from CL:0002193 ! myelocyte relationship: derives_from CL:0000836 ! promyelocyte relationship: derives_from CL:0002193 ! myelocyte [Term] id: FF:0000145 name: human prostate epithelial cell sample namespace: FANTOM5 synonym: "prostate epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002231 ! epithelial cell of prostate relationship: derives_from CL:0002231 ! epithelial cell of prostate [Term] id: FF:0000146 name: human stromal cell of pancreas sample namespace: FANTOM5 synonym: "stromal cell of pancreas" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002574 ! stromal cell of pancreas relationship: derives_from CL:0002574 ! stromal cell of pancreas [Term] id: FF:0000151 name: human renal epithelial cell sample namespace: FANTOM5 comment: renal tubule epithelial cell. synonym: "renal epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:1000494 ! epithelial cell of renal tubule relationship: derives_from CL:1000494 ! epithelial cell of renal tubule [Term] id: FF:0000152 name: human renal cortical epithelial cell sample namespace: FANTOM5 synonym: "renal cortical epithelial cell" EXACT [] is_a: FF:0000151 ! human renal epithelial cell sample intersection_of: FF:0000151 ! human renal epithelial cell sample intersection_of: derives_from CL:0002584 ! renal cortical epithelial cell relationship: derives_from CL:0002584 ! renal cortical epithelial cell [Term] id: FF:0000153 name: human renal glomerular endothelial cell sample namespace: FANTOM5 synonym: "renal glomerular endothelial cell" EXACT [] is_a: FF:0000046 ! human endothelial cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002188 ! glomerular endothelial cell relationship: derives_from CL:0002188 ! glomerular endothelial cell [Term] id: FF:0000154 name: human renal mesangial cell sample namespace: FANTOM5 synonym: "renal mesangial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000650 ! mesangial cell relationship: derives_from CL:0000650 ! mesangial cell [Term] id: FF:0000155 name: human renal proximal tubular epithelial cell sample namespace: FANTOM5 synonym: "renal proximal tubular epithelial cell" EXACT [] is_a: FF:0000152 ! human renal cortical epithelial cell sample intersection_of: FF:0000151 ! human renal epithelial cell sample intersection_of: derives_from CL:0002306 ! epithelial cell of proximal tubule relationship: derives_from CL:0002306 ! epithelial cell of proximal tubule [Term] id: FF:0000156 name: human adipocyte of breast sample namespace: FANTOM5 synonym: "adipocyte of breast" EXACT [] is_a: FF:0000266 ! human mature adipocyte sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002617 ! adipocyte of breast relationship: derives_from CL:0002617 ! adipocyte of breast [Term] id: FF:0000158 name: human retinal pigment epithelial cell sample namespace: FANTOM5 synonym: "retinal pigment epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002586 ! retinal pigment epithelial cell relationship: derives_from CL:0002586 ! retinal pigment epithelial cell [Term] id: FF:0000159 name: human Schwann cell sample namespace: FANTOM5 synonym: "Schwann cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002573 ! Schwann cell relationship: derives_from CL:0002573 ! Schwann cell [Term] id: FF:0000160 name: human sebocyte sample namespace: FANTOM5 synonym: "sebocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002140 ! acinar cell of sebaceous gland relationship: derives_from CL:0002140 ! acinar cell of sebaceous gland [Term] id: FF:0000161 name: human sertoli cell sample namespace: FANTOM5 synonym: "sertoli cell" EXACT [] is_a: FF:0000099 ! human mesothelial cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000216 ! Sertoli cell relationship: derives_from CL:0000216 ! Sertoli cell [Term] id: FF:0000162 name: human skeletal muscle cell sample namespace: FANTOM5 synonym: "skeletal muscle cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000188 ! skeletal muscle cell relationship: derives_from CL:0000188 ! skeletal muscle cell [Term] id: FF:0000164 name: human skeletal muscle myoblast sample namespace: FANTOM5 synonym: "skeletal muscle myoblast" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample relationship: derives_from CL:0000515 ! skeletal muscle myoblast [Term] id: FF:0000165 name: human skeletal muscle satellite cell sample namespace: FANTOM5 synonym: "skeletal muscle satellite cell" EXACT [] is_a: FF:0000162 ! human skeletal muscle cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000594 ! skeletal muscle satellite cell relationship: derives_from CL:0000594 ! skeletal muscle satellite cell [Term] id: FF:0000166 name: human small airway epithelial cell sample namespace: FANTOM5 synonym: "small airway epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002368 ! respiratory epithelial cell relationship: derives_from CL:0002368 ! respiratory epithelial cell [Term] id: FF:0000167 name: smooth muscle cell sample namespace: FANTOM5 def: "A sample containing materials from a smooth muscle cell." [GOC:tfm] synonym: "smooth muscle cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: derives_from CL:0000192 ! smooth muscle cell relationship: derives_from CL:0000192 ! smooth muscle cell [Term] id: FF:0000168 name: human aortic smooth muscle cell sample namespace: FANTOM5 synonym: "human aortic smooth muscle cell" EXACT [] is_a: FF:0000167 ! smooth muscle cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000167 ! smooth muscle cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002539 ! aortic smooth muscle cell relationship: derives_from CL:0002539 ! aortic smooth muscle cell [Term] id: FF:0000169 name: human smooth muscle cell of the brachiocephalic vasculature sample namespace: FANTOM5 synonym: "smooth muscle cell of the brachiocephalic vasculature" EXACT [] is_a: FF:0000167 ! smooth muscle cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000167 ! smooth muscle cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002589 ! smooth muscle cell of the brachiocephalic vasculature relationship: derives_from CL:0002589 ! smooth muscle cell of the brachiocephalic vasculature [Term] id: FF:0000170 name: human smooth muscle cell of the brain vasculature sample namespace: FANTOM5 synonym: "smooth muscle cell of the brain vasculature" EXACT [] is_a: FF:0000167 ! smooth muscle cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000167 ! smooth muscle cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002590 ! smooth muscle cell of the brain vasculature relationship: derives_from CL:0002590 ! smooth muscle cell of the brain vasculature [Term] id: FF:0000171 name: human smooth muscle cell of the carotid artery sample namespace: FANTOM5 synonym: "smooth muscle cell of the carotid artery" EXACT [] is_a: FF:0000167 ! smooth muscle cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000167 ! smooth muscle cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002596 ! smooth muscle cell of the carotid artery relationship: derives_from CL:0002596 ! smooth muscle cell of the carotid artery [Term] id: FF:0000172 name: human smooth muscle cell of coronary artery sample namespace: FANTOM5 synonym: "smooth muscle cell of coronary artery" EXACT [] is_a: FF:0000167 ! smooth muscle cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000167 ! smooth muscle cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002592 ! smooth muscle cell of the coronary artery relationship: derives_from CL:0002592 ! smooth muscle cell of the coronary artery [Term] id: FF:0000173 name: human smooth muscle cell of the internal thoracic artery sample namespace: FANTOM5 synonym: "smooth muscle cell of the internal thoracic artery" EXACT [] is_a: FF:0000175 ! human smooth muscle cell of subclavian artery sample intersection_of: FF:0000167 ! smooth muscle cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002593 ! smooth muscle cell of the internal thoracic artery relationship: derives_from CL:0002593 ! smooth muscle cell of the internal thoracic artery [Term] id: FF:0000174 name: human smooth muscle cell of pulmonary artery sample namespace: FANTOM5 synonym: "smooth muscle cell of pulmonary artery" EXACT [] is_a: FF:0000167 ! smooth muscle cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000167 ! smooth muscle cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002591 ! smooth muscle cell of the pulmonary artery relationship: derives_from CL:0002591 ! smooth muscle cell of the pulmonary artery [Term] id: FF:0000175 name: human smooth muscle cell of subclavian artery sample namespace: FANTOM5 synonym: "smooth muscle cell of subclavian artery" EXACT [] is_a: FF:0000167 ! smooth muscle cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000167 ! smooth muscle cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002595 ! smooth muscle cell of the subclavian artery relationship: derives_from CL:0002595 ! smooth muscle cell of the subclavian artery [Term] id: FF:0000176 name: human smooth muscle cell of umbilical artery sample namespace: FANTOM5 synonym: "smooth muscle cell of umbilical artery" EXACT [] is_a: FF:0000210 ! human sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002594 ! smooth muscle cell of the umbilical artery relationship: derives_from CL:0002594 ! smooth muscle cell of the umbilical artery [Term] id: FF:0000177 name: human smooth muscle cell of umbilical vein sample namespace: FANTOM5 synonym: "smooth muscle cell of umbilical vein" EXACT [] is_a: FF:0000210 ! human sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002588 ! smooth muscle cell of the umbilical vein relationship: derives_from CL:0002588 ! smooth muscle cell of the umbilical vein [Term] id: FF:0000178 name: human smooth muscle cell of bladder sample namespace: FANTOM5 synonym: "smooth muscle cell of bladder" EXACT [] is_a: FF:0000210 ! human sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002597 ! smooth muscle cell of bladder relationship: derives_from CL:0002597 ! smooth muscle cell of bladder [Term] id: FF:0000179 name: human bronchial smooth muscle cell sample namespace: FANTOM5 synonym: "bronchial smooth muscle cell" EXACT [] is_a: FF:0000210 ! human sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002598 ! bronchial smooth muscle cell relationship: derives_from CL:0002598 ! bronchial smooth muscle cell [Term] id: FF:0000180 name: human smooth muscle cell of intestine sample namespace: FANTOM5 synonym: "smooth muscle cell of intestine" EXACT [] is_a: FF:0000210 ! human sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002504 ! enteric smooth muscle cell relationship: derives_from CL:0002504 ! enteric smooth muscle cell [Term] id: FF:0000181 name: human smooth muscle of colon sample namespace: FANTOM5 synonym: "smooth muscle of colon" EXACT [] is_a: FF:0000180 ! human smooth muscle cell of intestine sample intersection_of: FF:0000180 ! human smooth muscle cell of intestine sample intersection_of: derives_from CL:1000280 ! smooth muscle cell of colon relationship: derives_from CL:1000280 ! smooth muscle cell of colon [Term] id: FF:0000182 name: human esophageal smooth muscle cell sample namespace: FANTOM5 synonym: "esophageal smooth muscle cell" EXACT [] is_a: FF:0000167 ! smooth muscle cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000167 ! smooth muscle cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002599 ! smooth muscle cell of the esophagus relationship: derives_from CL:0002599 ! smooth muscle cell of the esophagus [Term] id: FF:0000183 name: human smooth muscle cell of prostate sample namespace: FANTOM5 synonym: "smooth muscle cell of prostate" EXACT [] is_a: FF:0000167 ! smooth muscle cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000167 ! smooth muscle cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:1000487 ! smooth muscle cell of prostate relationship: derives_from CL:1000487 ! smooth muscle cell of prostate [Term] id: FF:0000184 name: human smooth muscle cell of trachea sample namespace: FANTOM5 synonym: "smooth muscle cell of trachea" EXACT [] is_a: FF:0000167 ! smooth muscle cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000167 ! smooth muscle cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002600 ! smooth muscle cell of trachea relationship: derives_from CL:0002600 ! smooth muscle cell of trachea [Term] id: FF:0000185 name: human uterine smooth muscle cell sample namespace: FANTOM5 synonym: "uterine smooth muscle cell" EXACT [] is_a: FF:0000167 ! smooth muscle cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000167 ! smooth muscle cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002601 ! uterine smooth muscle cell relationship: derives_from CL:0002601 ! uterine smooth muscle cell [Term] id: FF:0000187 name: human synovial cell sample namespace: FANTOM5 synonym: "synovial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000214 ! synovial cell relationship: derives_from CL:0000214 ! synovial cell [Term] id: FF:0000188 name: human trabecular meshwork cell sample namespace: FANTOM5 def: "A cell of the trabecular meshwork." [GOC:tfm] synonym: "trabecular meshwork cell" EXACT [] is_a: FF:0000046 ! human endothelial cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002367 ! trabecular meshwork cell relationship: derives_from CL:0002367 ! trabecular meshwork cell [Term] id: FF:0000189 name: human tracheal epithelial cell sample namespace: FANTOM5 synonym: "tracheal epithelial cell" EXACT [] is_a: FF:0000166 ! human small airway epithelial cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000307 ! tracheal epithelial cell relationship: derives_from CL:0000307 ! tracheal epithelial cell [Term] id: FF:0000191 name: human urothelial cell sample namespace: FANTOM5 synonym: "urothelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000731 ! urothelial cell relationship: derives_from CL:0000731 ! urothelial cell [Term] id: FF:0000192 name: human anulus pulposus cell sample namespace: FANTOM5 synonym: "anulus pulposus cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002602 ! annulus pulposus cell relationship: derives_from CL:0002602 ! annulus pulposus cell [Term] id: FF:0000194 name: human astrocyte of the cerebral cortex sample namespace: FANTOM5 synonym: "astrocyte of the cerebral cortex" EXACT [] is_a: FF:0000124 ! human oligodendrocyte sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002605 ! astrocyte of the cerebral cortex relationship: derives_from CL:0002605 ! astrocyte of the cerebral cortex [Term] id: FF:0000195 name: human astrocyte of the cerebellum sample namespace: FANTOM5 synonym: "astrocyte of the cerebellum" EXACT [] is_a: FF:0000124 ! human oligodendrocyte sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002603 ! astrocyte of the cerebellum relationship: derives_from CL:0002603 ! astrocyte of the cerebellum [Term] id: FF:0000196 name: mouse astrocyte of cerebellum sample namespace: FANTOM5 synonym: "mouse astrocyte of cerebellum" EXACT [] is_a: FF:0000105 ! mouse astrocyte sample intersection_of: FF:0000105 ! mouse astrocyte sample intersection_of: derives_from CL:0002603 ! astrocyte of the cerebellum relationship: derives_from CL:0002603 ! astrocyte of the cerebellum [Term] id: FF:0000197 name: mouse astrocyte of hippocampus sample namespace: FANTOM5 synonym: "mouse astrocyte of hippocampus" EXACT [] is_a: FF:0000105 ! mouse astrocyte sample intersection_of: FF:0000105 ! mouse astrocyte sample intersection_of: derives_from CL:0002604 ! astrocyte of the hippocampus relationship: derives_from CL:0002604 ! astrocyte of the hippocampus [Term] id: FF:0000201 name: hippocampal neuron sample namespace: FANTOM5 synonym: "hippocampal neuron" EXACT [] is_a: FF:0000002 ! in vivo cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: derives_from CL:0002608 ! hippocampal neuron relationship: derives_from CL:0002608 ! hippocampal neuron [Term] id: FF:0000202 name: mouse hippocampal neuron sample namespace: FANTOM5 synonym: "mouse hippocampal neuron" EXACT [] is_a: FF:0000201 ! hippocampal neuron sample is_a: FF:0000204 ! cortical mouse neuron sample intersection_of: FF:0000203 ! mouse neuron samples intersection_of: derives_from CL:0002608 ! hippocampal neuron relationship: derives_from CL:0002608 ! hippocampal neuron [Term] id: FF:0000203 name: mouse neuron samples namespace: FANTOM5 synonym: "mouse neuron" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0000540 ! neuron relationship: derives_from CL:0000540 ! neuron [Term] id: FF:0000204 name: cortical mouse neuron sample namespace: FANTOM5 synonym: "cortical mouse neuron" EXACT [] is_a: FF:0000203 ! mouse neuron samples intersection_of: FF:0000203 ! mouse neuron samples intersection_of: derives_from CL:0002609 ! neuron of cerebral cortex relationship: derives_from CL:0002609 ! neuron of cerebral cortex [Term] id: FF:0000205 name: mouse raphe nuclei neuron sample namespace: FANTOM5 synonym: "mouse raphe nuclei neuron" EXACT [] is_a: FF:0000203 ! mouse neuron samples intersection_of: FF:0000203 ! mouse neuron samples intersection_of: derives_from CL:0002610 ! raphe nuclei neuron relationship: derives_from CL:0002610 ! raphe nuclei neuron [Term] id: FF:0000206 name: mouse neuron of the dorsal spinal cord sample namespace: FANTOM5 synonym: "mouse neuron of the dorsal spinal cord" EXACT [] is_a: FF:0000203 ! mouse neuron samples intersection_of: FF:0000203 ! mouse neuron samples intersection_of: derives_from CL:0002611 ! neuron of the dorsal spinal cord relationship: derives_from CL:0002611 ! neuron of the dorsal spinal cord [Term] id: FF:0000207 name: mouse neuron of the ventral spinal cord sample namespace: FANTOM5 synonym: "mouse neuron of the ventral spinal cord" EXACT [] is_a: FF:0000203 ! mouse neuron samples intersection_of: FF:0000203 ! mouse neuron samples intersection_of: derives_from CL:0002612 ! neuron of the ventral spinal cord relationship: derives_from CL:0002612 ! neuron of the ventral spinal cord [Term] id: FF:0000208 name: mouse neuron of the substantia nigra sample namespace: FANTOM5 synonym: "mouse neuron of the substantia nigra" EXACT [] is_a: FF:0000203 ! mouse neuron samples intersection_of: FF:0000203 ! mouse neuron samples intersection_of: derives_from CL:0002614 ! neuron of the substantia nigra relationship: derives_from CL:0002614 ! neuron of the substantia nigra [Term] id: FF:0000209 name: mouse striatal neuron sample namespace: FANTOM5 synonym: "mouse striatal neuron" EXACT [] is_a: FF:0000203 ! mouse neuron samples intersection_of: FF:0000203 ! mouse neuron samples intersection_of: derives_from CL:0002613 ! striatum neuron relationship: derives_from CL:0002613 ! striatum neuron [Term] id: FF:0000210 name: human sample namespace: FANTOM5 def: "A sample consisting of material from a human." [GOC:tfm] synonym: "homo sapiens" RELATED [] synonym: "human" EXACT [] is_a: FF:0000101 ! sample by species intersection_of: FF:0000101 ! sample by species intersection_of: derives_from NCBITaxon:9606 ! Homo sapiens relationship: derives_from NCBITaxon:9606 ! Homo sapiens [Term] id: FF:0000211 name: human perirenal adipocyte cell sample namespace: FANTOM5 synonym: "perirenal adipocyte cell" EXACT [] is_a: FF:0000266 ! human mature adipocyte sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002616 ! perirenal adipocyte cell relationship: derives_from CL:0002616 ! perirenal adipocyte cell [Term] id: FF:0000212 name: human basophil heparinase treated sample namespace: FANTOM5 comment: todo - heparinase synonym: "basophil heparinase treated" EXACT [] is_a: FF:0000013 ! human basophil sample [Term] id: FF:0000245 name: human chondrocyte re-differentiated sample namespace: FANTOM5 synonym: "chondrocyte re-differentiated" EXACT [] is_a: FF:0000037 ! human chondrocyte sample [Term] id: FF:0000246 name: human chondrocyte de-differentiated sample namespace: FANTOM5 comment: todo synonym: "chondrocyte de-differentiated" EXACT [] is_a: FF:0000037 ! human chondrocyte sample [Term] id: FF:0000247 name: human endothelial cell of umbilical vein sample namespace: FANTOM5 synonym: "endothelial cell of umbilical vein" EXACT [] is_a: FF:0000052 ! human endothelial cell of the vein sample intersection_of: FF:0000052 ! human endothelial cell of the vein sample intersection_of: derives_from CL:0002618 ! endothelial cell of umbilical vein relationship: derives_from CL:0002618 ! endothelial cell of umbilical vein [Term] id: FF:0000248 name: human endothelial progenitor cell sample namespace: FANTOM5 synonym: "endothelial progenitor cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002619 ! adult endothelial progenitor cell relationship: derives_from CL:0002619 ! adult endothelial progenitor cell [Term] id: FF:0000249 name: human eosinophil- heparinase treated sample namespace: FANTOM5 synonym: "eosinophil- heparinase treated" EXACT [] is_a: FF:0000054 ! human eosinophil sample [Term] id: FF:0000250 name: human fibroblast of skin sample namespace: FANTOM5 synonym: "fibroblast of skin" EXACT [] is_a: FF:0000057 ! fibroblast sample is_a: FF:0000210 ! human sample intersection_of: FF:0000057 ! fibroblast sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002620 ! skin fibroblast relationship: derives_from CL:0002620 ! skin fibroblast [Term] id: FF:0000251 name: human fibroblast - skin spinal muscular atrophy sample namespace: FANTOM5 synonym: "fibroblast - skin spinal muscular atrophy" EXACT [] is_a: FF:0000250 ! human fibroblast of skin sample intersection_of: FF:0000250 ! human fibroblast of skin sample intersection_of: is_model_for DOID:12377 ! spinal muscular atrophy relationship: is_model_for DOID:12377 ! spinal muscular atrophy [Term] id: FF:0000252 name: human fibroblast - skin walker warburg sample namespace: FANTOM5 synonym: "fibroblast - skin walker warburg" EXACT [] is_a: FF:0000250 ! human fibroblast of skin sample intersection_of: FF:0000250 ! human fibroblast of skin sample intersection_of: is_model_for DOID:0050560 ! Walker-Warburg syndrome relationship: is_model_for DOID:0050560 ! Walker-Warburg syndrome [Term] id: FF:0000253 name: human fibroblast- skin dystrophia myotonica sample namespace: FANTOM5 synonym: "fibroblast- skin dystrophia myotonica" EXACT [] is_a: FF:0000250 ! human fibroblast of skin sample intersection_of: FF:0000250 ! human fibroblast of skin sample intersection_of: is_model_for DOID:11722 ! myotonic dystrophy relationship: is_model_for DOID:11722 ! myotonic dystrophy [Term] id: FF:0000254 name: human gingival epithelial cell sample namespace: FANTOM5 synonym: "gingival epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002621 ! gingival epithelial cell relationship: derives_from CL:0002621 ! gingival epithelial cell [Term] id: FF:0000260 name: mast cell sample namespace: FANTOM5 synonym: "mast cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: derives_from CL:0000097 ! mast cell relationship: derives_from CL:0000097 ! mast cell [Term] id: FF:0000261 name: mast cell- heparinase treated sample namespace: FANTOM5 synonym: "mast cell- heparinase treated" EXACT [] is_a: FF:0000260 ! mast cell sample [Term] id: FF:0000262 name: mast cell- stimulated sample namespace: FANTOM5 synonym: "mast cell- stimulated" EXACT [] is_a: FF:0000260 ! mast cell sample [Term] id: FF:0000264 name: mouse inner hair cell sample namespace: FANTOM5 synonym: "inner hair cell" EXACT [] is_a: FF:0000203 ! mouse neuron samples intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0000589 ! cochlear inner hair cell relationship: derives_from CL:0000589 ! cochlear inner hair cell [Term] id: FF:0000265 name: mouse Atoh-positive inner hair cell sample namespace: FANTOM5 synonym: "Atoh-positive inner hair cell" EXACT [] is_a: FF:0000264 ! mouse inner hair cell sample [Term] id: FF:0000266 name: human mature adipocyte sample namespace: FANTOM5 synonym: "mature adipocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000136 ! fat cell relationship: derives_from CL:0000136 ! fat cell [Term] id: FF:0000267 name: mouse muscle derived stem cell sample namespace: FANTOM5 synonym: "mouse muscle derived stem cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0000355 ! muscle stem cell relationship: derives_from CL:0000355 ! muscle stem cell [Term] id: FF:0000268 name: cancer related muscle derived stem cell (Mouse) sample namespace: FANTOM5 synonym: "cancer related muscle derived stem cell (Mouse)" EXACT [] is_a: FF:0000267 ! mouse muscle derived stem cell sample intersection_of: FF:0000267 ! mouse muscle derived stem cell sample intersection_of: is_model_for DOID:4045 ! muscle cancer relationship: is_model_for DOID:4045 ! muscle cancer [Term] id: FF:0000269 name: human mesenchymal precursor cell of bone marrow sample namespace: FANTOM5 synonym: "mesenchymal precursor cell of bone marrow" EXACT [] is_a: FF:0000097 ! human mesenchymal stem cell of bone marrow sample relationship: derives_from CL:0002540 ! mesenchymal stem cell of the bone marrow [Term] id: FF:0000271 name: human cardiac mesenchymal precursor cell sample namespace: FANTOM5 synonym: "cardiac mesenchymal precursor cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000569 ! cardiac mesenchymal cell relationship: derives_from CL:0000569 ! cardiac mesenchymal cell [Term] id: FF:0000272 name: human ovarian cancer mesenchymal precursor cell sample namespace: FANTOM5 synonym: "ovarian cancer mesenchymal precursor cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000134 ! mesenchymal cell intersection_of: is_model_for DOID:2394 ! ovarian cancer relationship: derives_from CL:0000134 ! mesenchymal cell relationship: is_model_for DOID:2394 ! ovarian cancer [Term] id: FF:0000273 name: human mesenchymal precursor cell- ovarian cancer-left ovary sample namespace: FANTOM5 synonym: "mesenchymal precursor cell- ovarian cancer-left ovary" EXACT [] is_a: FF:0000272 ! human ovarian cancer mesenchymal precursor cell sample intersection_of: FF:0000272 ! human ovarian cancer mesenchymal precursor cell sample intersection_of: derives_from UBERON:0002119 ! left ovary relationship: derives_from UBERON:0002119 ! left ovary [Term] id: FF:0000274 name: human mesenchymal precursor cell- ovarian cancer-metastasis sample namespace: FANTOM5 synonym: "mesenchymal precursor cell- ovarian cancer-metastasis" EXACT [] is_a: FF:0000272 ! human ovarian cancer mesenchymal precursor cell sample [Term] id: FF:0000275 name: human mesenchymal precursor cell- ovarian cancer-right ovary sample namespace: FANTOM5 synonym: "mesenchymal precursor cell- ovarian cancer-right ovary" EXACT [] is_a: FF:0000272 ! human ovarian cancer mesenchymal precursor cell sample intersection_of: FF:0000272 ! human ovarian cancer mesenchymal precursor cell sample intersection_of: derives_from UBERON:0002118 ! right ovary relationship: derives_from UBERON:0002118 ! right ovary [Term] id: FF:0000276 name: human amniotic membrane cell- fetal sample namespace: FANTOM5 synonym: "amniotic membrane cell- fetal" EXACT [] is_a: FF:0000092 ! human amniotic membrane cell sample [Term] id: FF:0000277 name: human prostate stromal cell sample namespace: FANTOM5 synonym: "prostate stromal cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002622 ! prostate stromal cell relationship: derives_from CL:0002622 ! prostate stromal cell [Term] id: FF:0000278 name: human salivary acinar cell sample namespace: FANTOM5 synonym: "salivary acinar cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002623 ! acinar cell of salivary gland relationship: derives_from CL:0002623 ! acinar cell of salivary gland [Term] id: FF:0000279 name: mouse Sox2-positive supporting cell- organ of corti sample namespace: FANTOM5 synonym: "Sox2-positive supporting cell- organ of corti" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample relationship: derives_from CL:0002490 ! organ of Corti supporting cell [Term] id: FF:0000280 name: human tenocyte sample namespace: FANTOM5 synonym: "tenocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000388 ! tendon cell relationship: derives_from CL:0000388 ! tendon cell [Term] id: FF:0000281 name: human whole blood sample namespace: FANTOM5 synonym: "whole blood" EXACT [] is_a: FF:0010053 ! human blood - adult sample [Term] id: FF:0000292 name: embryonic day sample - mouse namespace: FANTOM5 synonym: "embryonic day" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000999 ! fetal tissue sample [Term] id: FF:0000293 name: mouse embryonic day 13 sample namespace: FANTOM5 synonym: "E13" EXACT [] synonym: "embryonic day 13" EXACT [] is_a: FF:0000292 ! embryonic day sample - mouse is_a: FF:0300110 ! 13 days sample [Term] id: FF:0000294 name: mouse embryonic day 11 sample namespace: FANTOM5 synonym: "E11" EXACT [] synonym: "embryonic day 11" EXACT [] is_a: FF:0000292 ! embryonic day sample - mouse [Term] id: FF:0000295 name: mouse embryonic day 12 sample namespace: FANTOM5 synonym: "E12" EXACT [] synonym: "embryonic day 12" EXACT [] is_a: FF:0000292 ! embryonic day sample - mouse [Term] id: FF:0000296 name: mouse embryonic day 14 sample namespace: FANTOM5 synonym: "E14" EXACT [] synonym: "embryonic day 14" EXACT [] is_a: FF:0000292 ! embryonic day sample - mouse [Term] id: FF:0000297 name: mouse embryonic day 14.5 sample namespace: FANTOM5 synonym: "E14.5" EXACT [] synonym: "embryonic day 14.5" EXACT [] is_a: FF:0000292 ! embryonic day sample - mouse [Term] id: FF:0000298 name: mouse embryonic day 15 sample namespace: FANTOM5 synonym: "E15" EXACT [] synonym: "embryonic day 15" EXACT [] is_a: FF:0000292 ! embryonic day sample - mouse [Term] id: FF:0000299 name: mouse embryonic day 16 sample namespace: FANTOM5 synonym: "E16" EXACT [] synonym: "embryonic day 16" EXACT [] is_a: FF:0000292 ! embryonic day sample - mouse [Term] id: FF:0000300 name: mouse embryonic day 17 sample namespace: FANTOM5 synonym: "E17" EXACT [] synonym: "embryonic day 17" EXACT [] is_a: FF:0000292 ! embryonic day sample - mouse [Term] id: FF:0000301 name: mouse embryonic day 17.5 sample namespace: FANTOM5 synonym: "E17.5" EXACT [] synonym: "embryonic day 17.5" EXACT [] is_a: FF:0000292 ! embryonic day sample - mouse [Term] id: FF:0000302 name: mouse embryonic day 18 sample namespace: FANTOM5 synonym: "E18" EXACT [] synonym: "embryonic day 18" EXACT [] is_a: FF:0000292 ! embryonic day sample - mouse [Term] id: FF:0000303 name: neonate sample - mouse namespace: FANTOM5 synonym: "neonate" EXACT [] is_a: FF:0000004 ! tissue sample is_a: FF:0000103 ! mouse sample [Term] id: FF:0000304 name: mouse neonate N0 sample namespace: FANTOM5 synonym: "neonate N0" EXACT [] is_a: FF:0000303 ! neonate sample - mouse [Term] id: FF:0000305 name: mouse neonate N10 sample namespace: FANTOM5 synonym: "neonate N10" EXACT [] is_a: FF:0000303 ! neonate sample - mouse [Term] id: FF:0000306 name: mouse neonate N16 sample namespace: FANTOM5 synonym: "neonate N16" EXACT [] is_a: FF:0000303 ! neonate sample - mouse [Term] id: FF:0000307 name: mouse neonate N2 sample namespace: FANTOM5 synonym: "neonate N2" EXACT [] is_a: FF:0000303 ! neonate sample - mouse [Term] id: FF:0000308 name: mouse neonate N20 sample namespace: FANTOM5 synonym: "neonate N20" EXACT [] is_a: FF:0000303 ! neonate sample - mouse [Term] id: FF:0000309 name: mouse neonate N25 sample namespace: FANTOM5 synonym: "neonate N25" EXACT [] is_a: FF:0000303 ! neonate sample - mouse [Term] id: FF:0000310 name: mouse neonate N30 sample namespace: FANTOM5 synonym: "neonate N30" EXACT [] is_a: FF:0000303 ! neonate sample - mouse [Term] id: FF:0000311 name: mouse neonate N3 sample namespace: FANTOM5 synonym: "neonate N3" EXACT [] is_a: FF:0000303 ! neonate sample - mouse [Term] id: FF:0000312 name: mouse neonate N6 sample namespace: FANTOM5 synonym: "neonate N6" EXACT [] is_a: FF:0000303 ! neonate sample - mouse [Term] id: FF:0000313 name: mouse neonate N7 sample namespace: FANTOM5 synonym: "neonate N7" EXACT [] is_a: FF:0000303 ! neonate sample - mouse [Term] id: FF:0000315 name: mouse neonate N60-70 sample namespace: FANTOM5 synonym: "neonate N60-70" EXACT [] is_a: FF:0000303 ! neonate sample - mouse is_a: FF:0000998 ! adult tissue sample [Term] id: FF:0000316 name: mouse neonate N15 sample namespace: FANTOM5 synonym: "neonate N15" EXACT [] is_a: FF:0000303 ! neonate sample - mouse [Term] id: FF:0000317 name: mouse pregnant tissue sample namespace: FANTOM5 synonym: "mouse pregnant tissue" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample relationship: derives_from UBERON:0000479 ! tissue [Term] id: FF:0000318 name: mouse pregnant day 1 sample namespace: FANTOM5 synonym: "mouse pregnant day 1" EXACT [] is_a: FF:0000317 ! mouse pregnant tissue sample [Term] id: FF:0000320 name: mouse pregnant day 10 sample namespace: FANTOM5 synonym: "mouse pregnant day 10" EXACT [] is_a: FF:0000317 ! mouse pregnant tissue sample [Term] id: FF:0000321 name: mouse pregnant day 17 sample namespace: FANTOM5 synonym: "mouse pregnant day 17" EXACT [] is_a: FF:0000317 ! mouse pregnant tissue sample [Term] id: FF:0000322 name: mouse pregnant day 17.5 sample namespace: FANTOM5 synonym: "mouse pregnant day 17.5" EXACT [] is_a: FF:0000317 ! mouse pregnant tissue sample [Term] id: FF:0000324 name: mouse lactating sample namespace: FANTOM5 synonym: "mouse lactating" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample [Term] id: FF:0000329 name: adipogenic induction sample namespace: FANTOM5 synonym: "adipogenic induction" EXACT [] is_a: EFO:0000369 ! compound based treatment [Term] id: FF:0000330 name: EGF1 treatment sample namespace: FANTOM5 synonym: "EGF1 treatment" EXACT [] is_a: EFO:0000369 ! compound based treatment [Term] id: FF:0000332 name: calcification induced with ascorbate and BPG sample namespace: FANTOM5 synonym: "calcification induced with ascorbate and BPG" EXACT [] is_a: EFO:0000369 ! compound based treatment [Term] id: FF:0000333 name: medium change sample namespace: FANTOM5 synonym: "medium change" EXACT [] is_a: EFO:0000369 ! compound based treatment [Term] id: FF:0000334 name: melanocytic induction sample namespace: FANTOM5 synonym: "melanocytic induction" EXACT [] is_a: EFO:0000369 ! compound based treatment relationship: derives_from CL:0000148 ! melanocyte [Term] id: FF:0000335 name: LPS treatment sample namespace: FANTOM5 synonym: "lipopolysaccharide treatment" RELATED [] synonym: "LPS treatment" EXACT [] is_a: EFO:0000369 ! compound based treatment is_a: FF:0000625 ! experimental infection sample [Term] id: FF:0000337 name: erythropoietin treatment sample namespace: FANTOM5 synonym: "erythropoietin treatment" EXACT [] is_a: EFO:0000369 ! compound based treatment [Term] id: FF:0000339 name: FGF2 treatment sample namespace: FANTOM5 synonym: "FGF2 treatment" EXACT [] is_a: EFO:0000369 ! compound based treatment [Term] id: FF:0000340 name: IL1-beta treatment sample namespace: FANTOM5 synonym: "IL-1b" EXACT [] synonym: "IL1-beta treatment" EXACT [] synonym: "IL1b" EXACT [] is_a: EFO:0000369 ! compound based treatment [Term] id: FF:0000341 name: Vegfc treatment sample namespace: FANTOM5 synonym: "Vegfc treatment" EXACT [] is_a: EFO:0000369 ! compound based treatment [Term] id: FF:0000342 name: T-cell induction sample namespace: FANTOM5 synonym: "T-cell induction" EXACT [] is_a: EFO:0000369 ! compound based treatment [Term] id: FF:0000343 name: control treatment sample namespace: FANTOM5 synonym: "control treatment" EXACT [] is_a: EFO:0000727 ! treatment [Term] id: FF:0000344 name: 0 minute sample namespace: FANTOM5 synonym: "0 minute" EXACT [] is_a: UO:0000031 ! minute [Term] id: FF:0000348 name: human neuron samples namespace: FANTOM5 synonym: "human neuron" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000540 ! neuron relationship: derives_from CL:0000540 ! neuron [Term] id: FF:0000350 name: experimentally modified sample namespace: FANTOM5 synonym: "experimentally modified" EXACT [] is_a: FF:0000001 ! sample [Term] id: FF:0000357 name: 0 hr sample namespace: FANTOM5 synonym: "0 hr" EXACT [] is_a: UO:0000032 ! hour [Term] id: FF:0000359 name: 2 hr sample namespace: FANTOM5 synonym: "2 hr" EXACT [] is_a: UO:0000032 ! hour [Term] id: FF:0000363 name: 6 hr sample namespace: FANTOM5 synonym: "6 hr" EXACT [] is_a: UO:0000032 ! hour [Term] id: FF:0000380 name: 0 days sample namespace: FANTOM5 synonym: "0 days" EXACT [] is_a: UO:0000033 ! day [Term] id: FF:0000383 name: 3 days sample namespace: FANTOM5 synonym: "3 days" EXACT [] is_a: UO:0000033 ! day [Term] id: FF:0000391 name: 15 days sample namespace: FANTOM5 synonym: "15 days" EXACT [] is_a: UO:0000033 ! day [Term] id: FF:0000400 name: H9 embryonic stem cell line sample namespace: FANTOM5 synonym: "H9 embryonic stem cell line" EXACT [] is_a: FF:0101581 ! embryonic stem cell line sample [Term] id: FF:0000401 name: erythroblastic leukemia cell line sample namespace: FANTOM5 synonym: "erythroblastic leukemia cell line" EXACT [] is_a: FF:0100737 ! leukemia cell line sample intersection_of: FF:0100737 ! leukemia cell line sample intersection_of: derives_from CL:0000765 ! erythroblast relationship: derives_from CL:0000765 ! erythroblast [Term] id: FF:0000403 name: mouse J2E erythroblastic leukemia cell line sample namespace: FANTOM5 synonym: "J2E erythroblastic leukemia cell line" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000401 ! erythroblastic leukemia cell line sample [Term] id: FF:0000404 name: mouse mesenchymal stem cell line: ST2 sample namespace: FANTOM5 synonym: "mesenchymal stem cell line: ST2" EXACT [] is_a: FF:0000003 ! cell line sample is_a: FF:0000103 ! mouse sample relationship: derives_from CL:0000134 ! mesenchymal cell [Term] id: FF:0000405 name: cytoplasmic fraction sample namespace: FANTOM5 synonym: "cytoplasmic fraction" EXACT [] is_a: FF:0000408 ! cellular fractionation sample [Term] id: FF:0000406 name: nuclear fraction sample namespace: FANTOM5 synonym: "nuclear fraction" EXACT [] is_a: FF:0000408 ! cellular fractionation sample [Term] id: FF:0000408 name: cellular fractionation sample namespace: FANTOM5 synonym: "cellular fractionation" EXACT [] is_a: FF:0000350 ! experimentally modified sample [Term] id: FF:0000409 name: T cell expansion sample namespace: FANTOM5 def: "Expansion of T cell population by any combination of activating agents." [GOC:tfm] synonym: "T cell expansion" EXACT [] is_a: EFO:0000369 ! compound based treatment [Term] id: FF:0000410 name: human Lymphatic Endothelial cells 0min after VEGFC treatment sample namespace: FANTOM5 synonym: "Lymphatic Endothelial cells 0min after VEGFC treatment" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000049 ! human lymphatic endothelial cell sample is_a: FF:0000341 ! Vegfc treatment sample is_a: FF:0000344 ! 0 minute sample is_a: FF:0000350 ! experimentally modified sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000049 ! human lymphatic endothelial cell sample intersection_of: FF:0000341 ! Vegfc treatment sample intersection_of: FF:0000344 ! 0 minute sample intersection_of: FF:0000350 ! experimentally modified sample [Term] id: FF:0000426 name: human MCF7 breast cancer cell line 0min after EGF1 treatment sample namespace: FANTOM5 synonym: "MCF7 breast cancer cell line 0min after EGF1 treatment" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000210 ! human sample is_a: FF:0000330 ! EGF1 treatment sample is_a: FF:0000344 ! 0 minute sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0100093 ! MCF-7 cell sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000210 ! human sample intersection_of: FF:0000330 ! EGF1 treatment sample intersection_of: FF:0000344 ! 0 minute sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0100093 ! MCF-7 cell sample [Term] id: FF:0000488 name: mouse ST2 Mesenchymal stem cells, cells 0hr after medium change , without induction sample namespace: FANTOM5 synonym: "ST2 Mesenchymal stem cells, cells 0hr after medium change , without induction" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000333 ! medium change sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000357 ! 0 hr sample is_a: FF:0000404 ! mouse mesenchymal stem cell line: ST2 sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000333 ! medium change sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000357 ! 0 hr sample intersection_of: FF:0000404 ! mouse mesenchymal stem cell line: ST2 sample [Term] id: FF:0000498 name: mouse J2E erythroblastic leukemia line 0min after treatment with erythropoietin sample namespace: FANTOM5 synonym: "J2E erythroblastic leukemia line 0min after treatment with erythropoietin" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000337 ! erythropoietin treatment sample is_a: FF:0000344 ! 0 minute sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000403 ! mouse J2E erythroblastic leukemia cell line sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000337 ! erythropoietin treatment sample intersection_of: FF:0000344 ! 0 minute sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000403 ! mouse J2E erythroblastic leukemia cell line sample [Term] id: FF:0000532 name: human H9 Embryoid body cells 0 days after melanocytic induction sample namespace: FANTOM5 synonym: "H9 Embryoid body cells 0 days after melanocytic induction" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000210 ! human sample is_a: FF:0000334 ! melanocytic induction sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000380 ! 0 days sample is_a: FF:0000400 ! H9 embryonic stem cell line sample is_a: FF:0101120 ! epithelial cell line sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000210 ! human sample intersection_of: FF:0000334 ! melanocytic induction sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000380 ! 0 days sample intersection_of: FF:0000400 ! H9 embryonic stem cell line sample [Term] id: FF:0000546 name: human Aortic Smooth Muscle cells 0min after treatment with FGF2 sample namespace: FANTOM5 synonym: "Aortic Smooth Muscle cells 0min after treatment with FGF2" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000210 ! human sample is_a: FF:0000339 ! FGF2 treatment sample is_a: FF:0000344 ! 0 minute sample is_a: FF:0000350 ! experimentally modified sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000210 ! human sample intersection_of: FF:0000339 ! FGF2 treatment sample intersection_of: FF:0000344 ! 0 minute sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: derives_from CL:0002539 ! aortic smooth muscle cell relationship: derives_from CL:0002539 ! aortic smooth muscle cell [Term] id: FF:0000556 name: human Aortic Smooth Muscle cells 0min after treatment with IL1b sample namespace: FANTOM5 synonym: "Aortic Smooth Muscle cells 0min after treatment with IL1b" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000210 ! human sample is_a: FF:0000340 ! IL1-beta treatment sample is_a: FF:0000344 ! 0 minute sample is_a: FF:0000350 ! experimentally modified sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000210 ! human sample intersection_of: FF:0000340 ! IL1-beta treatment sample intersection_of: FF:0000344 ! 0 minute sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: derives_from CL:0002539 ! aortic smooth muscle cell relationship: derives_from CL:0002539 ! aortic smooth muscle cell [Term] id: FF:0000592 name: human H9 Embryonic Stem cells sample namespace: FANTOM5 comment: H9 synonym: "H9 Embryonic Stem cells" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000210 ! human sample is_a: FF:0000343 ! control treatment sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000400 ! H9 embryonic stem cell line sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000210 ! human sample intersection_of: FF:0000343 ! control treatment sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000400 ! H9 embryonic stem cell line sample [Term] id: FF:0000593 name: human Saos2 osteosarcoma cell line 0min after induction of calcification with ascorbate and BPG sample namespace: FANTOM5 comment: T0 synonym: "Saos2 osteosarcoma cell line 0min after induction of calcification with ascorbate and BPG" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000210 ! human sample is_a: FF:0000332 ! calcification induced with ascorbate and BPG sample is_a: FF:0000344 ! 0 minute sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0100971 ! SAOS-2 cell sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000210 ! human sample intersection_of: FF:0000332 ! calcification induced with ascorbate and BPG sample intersection_of: FF:0000344 ! 0 minute sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0100971 ! SAOS-2 cell sample [Term] id: FF:0000625 name: experimental infection sample namespace: FANTOM5 def: "A treatment whereinfectious agents, or compunds derived frmo infectious agents, are administered." [GOC:tfm] synonym: "experimental infection" EXACT [] is_a: EFO:0000727 ! treatment [Term] id: FF:0000626 name: trophoblast cell line sample namespace: FANTOM5 synonym: "trophoblast cell line" EXACT [] is_a: FF:0100669 ! embryonic cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from CL:0000351 ! trophoblast cell relationship: derives_from CL:0000034 ! stem cell relationship: derives_from CL:0000351 ! trophoblast cell [Term] id: FF:0000627 name: RANK ligand treatment sample namespace: FANTOM5 synonym: "RANK ligand treatment" EXACT [] is_a: EFO:0000369 ! compound based treatment [Term] id: FF:0000628 name: Bacillus Calmette-Guerin treatment sample namespace: FANTOM5 def: "Treatment with an attenuated strain of bovine tuberculosis bacillus." [] synonym: "Bacillus Calmette-Guerin treatment" EXACT [] is_a: FF:0000625 ! experimental infection sample [Term] id: FF:0000629 name: IFN and N-hexane treatment sample namespace: FANTOM5 synonym: "IFN and N-hexane treatment" EXACT [] is_a: EFO:0000369 ! compound based treatment [Term] id: FF:0000630 name: beta-glucan treatment sample namespace: FANTOM5 synonym: "B-glucan" RELATED [] synonym: "beta-glucan treatment" EXACT [] is_a: EFO:0000369 ! compound based treatment is_a: FF:0000625 ! experimental infection sample [Term] id: FF:0000631 name: trehalose dimycolate (TDM) treatment sample namespace: FANTOM5 def: "A compound derived from Mycobacterium." [GOC:tfm] synonym: "trehalose dimycolate (TDM) treatment" EXACT [] is_a: EFO:0000369 ! compound based treatment is_a: FF:0000625 ! experimental infection sample [Term] id: FF:0000632 name: group A streptococci treatment sample namespace: FANTOM5 synonym: "group A streptococci treatment" EXACT [] is_a: FF:0000625 ! experimental infection sample [Term] id: FF:0000633 name: Salmonella treatment sample namespace: FANTOM5 synonym: "Salmonella treatment" EXACT [] is_a: FF:0000625 ! experimental infection sample [Term] id: FF:0000634 name: Cryptococcus treatment sample namespace: FANTOM5 synonym: "Cryptococcus treatment" EXACT [] is_a: FF:0000625 ! experimental infection sample [Term] id: FF:0000635 name: Candida treatment sample namespace: FANTOM5 synonym: "Candida treatment" EXACT [] is_a: FF:0000625 ! experimental infection sample [Term] id: FF:0000636 name: IL-2 treatment sample namespace: FANTOM5 synonym: "IL-2 treatment" EXACT [] synonym: "IL2 treatment" RELATED [] synonym: "interleukin-2 treatment" RELATED [] is_a: EFO:0000369 ! compound based treatment [Term] id: FF:0000638 name: Streptococcus strain 5448 treatment sample namespace: FANTOM5 synonym: "Streptococcus strain 5448 treatment" EXACT [] is_a: FF:0000632 ! group A streptococci treatment sample [Term] id: FF:0000639 name: Streptococcus strain JRS4 treatment sample namespace: FANTOM5 synonym: "Streptococcus strain JRS4 treatment" EXACT [] is_a: FF:0000632 ! group A streptococci treatment sample [Term] id: FF:0000641 name: mouse trophoblast stem cell line B1 sample namespace: FANTOM5 synonym: "trophoblast stem cell line B1" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000626 ! trophoblast cell line sample [Term] id: FF:0000642 name: mouse trophoblast stem cell line Rybp sample namespace: FANTOM5 synonym: "trophoblast stem cell line Rybp" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000626 ! trophoblast cell line sample [Term] id: FF:0000643 name: mouse trophoblast stem cell line R1AB sample namespace: FANTOM5 synonym: "trophoblast stem cell line R1AB" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000626 ! trophoblast cell line sample [Term] id: FF:0000644 name: trophoblast cell line differentiation sample namespace: FANTOM5 synonym: "trophoblast cell line differentiation" EXACT [] is_a: EFO:0000369 ! compound based treatment is_a: FF:0000626 ! trophoblast cell line sample [Term] id: FF:0000645 name: tracheal ciliated cell differentiation sample namespace: FANTOM5 synonym: "tracheal ciliated cell differentiation" EXACT [] is_a: EFO:0000369 ! compound based treatment relationship: derives_from CL:0000307 ! tracheal epithelial cell [Term] id: FF:0000647 name: udorn influenza infection sample namespace: FANTOM5 synonym: "udorn influenza infection" EXACT [] is_a: FF:0000625 ! experimental infection sample relationship: is_model_for DOID:8469 ! influenza [Term] id: FF:0000652 name: tracheal ciliated cell line sample namespace: FANTOM5 synonym: "tracheal ciliated cell line" EXACT [] is_a: FF:0101120 ! epithelial cell line sample relationship: derives_from CL:0000307 ! tracheal epithelial cell [Term] id: FF:0000664 name: Smooth Muscle Cells - Aortic, (cytoplasmic fraction) sample namespace: FANTOM5 synonym: "Smooth Muscle Cells - Aortic, (cytoplasmic fraction)" EXACT [] is_a: FF:0000168 ! human aortic smooth muscle cell sample is_a: FF:0000405 ! cytoplasmic fraction sample intersection_of: FF:0000168 ! human aortic smooth muscle cell sample intersection_of: FF:0000405 ! cytoplasmic fraction sample [Term] id: FF:0000666 name: human Fibroblast - Aortic Adventitial, nuclear fraction sample namespace: FANTOM5 synonym: "Fibroblast - Aortic Adventitial, nuclear fraction" EXACT [] is_a: FF:0000058 ! human fibroblast of the aortic adventitia sample is_a: FF:0000406 ! nuclear fraction sample intersection_of: FF:0000058 ! human fibroblast of the aortic adventitia sample intersection_of: FF:0000406 ! nuclear fraction sample [Term] id: FF:0000667 name: human Fibroblast - skin dystrophia myotonica, nuclear fraction sample namespace: FANTOM5 synonym: "Fibroblast - skin dystrophia myotonica, nuclear fraction" EXACT [] is_a: FF:0000253 ! human fibroblast- skin dystrophia myotonica sample is_a: FF:0000406 ! nuclear fraction sample intersection_of: FF:0000253 ! human fibroblast- skin dystrophia myotonica sample intersection_of: FF:0000406 ! nuclear fraction sample [Term] id: FF:0000668 name: human Fibroblast - skin normal, nuclear fraction sample namespace: FANTOM5 synonym: "Fibroblast - skin normal, nuclear fraction" EXACT [] is_a: FF:0000250 ! human fibroblast of skin sample is_a: FF:0000406 ! nuclear fraction sample [Term] id: FF:0000670 name: human Fibroblast - skin spinal muscular atrophy, nuclear fraction sample namespace: FANTOM5 synonym: "Fibroblast - skin spinal muscular atrophy, nuclear fraction" EXACT [] is_a: FF:0000251 ! human fibroblast - skin spinal muscular atrophy sample is_a: FF:0000406 ! nuclear fraction sample intersection_of: FF:0000251 ! human fibroblast - skin spinal muscular atrophy sample intersection_of: FF:0000406 ! nuclear fraction sample [Term] id: FF:0000671 name: human Preadipocyte - breast, nuclear fraction sample namespace: FANTOM5 synonym: "Preadipocyte - breast, nuclear fraction" EXACT [] is_a: FF:0000139 ! human preadipocyte of the breast sample is_a: FF:0000406 ! nuclear fraction sample intersection_of: FF:0000139 ! human preadipocyte of the breast sample intersection_of: FF:0000406 ! nuclear fraction sample [Term] id: FF:0000672 name: human Smooth Muscle Cells - Aortic, nuclear fraction sample namespace: FANTOM5 synonym: "Smooth Muscle Cells - Aortic, nuclear fraction" EXACT [] is_a: FF:0000168 ! human aortic smooth muscle cell sample is_a: FF:0000406 ! nuclear fraction sample intersection_of: FF:0000168 ! human aortic smooth muscle cell sample intersection_of: FF:0000406 ! nuclear fraction sample [Term] id: FF:0000673 name: human Small Airway Epithelial Cells, nuclear fraction sample namespace: FANTOM5 synonym: "Small Airway Epithelial Cells, nuclear fraction" EXACT [] is_a: FF:0000166 ! human small airway epithelial cell sample is_a: FF:0000406 ! nuclear fraction sample intersection_of: FF:0000166 ! human small airway epithelial cell sample intersection_of: FF:0000406 ! nuclear fraction sample [Term] id: FF:0000690 name: human mesenchymal stem cells adipose derived, 0 minutes after adipogenic induction sample namespace: FANTOM5 synonym: "mesenchymal stem cells adipose derived, 0 minutes after adipogenic induction" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000096 ! human mesenchymal stem cell of adipose sample is_a: FF:0000266 ! human mature adipocyte sample is_a: FF:0000329 ! adipogenic induction sample is_a: FF:0000344 ! 0 minute sample is_a: FF:0000350 ! experimentally modified sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000096 ! human mesenchymal stem cell of adipose sample intersection_of: FF:0000329 ! adipogenic induction sample intersection_of: FF:0000344 ! 0 minute sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: derives_from CL:0000136 ! fat cell relationship: derives_from CL:0000136 ! fat cell [Term] id: FF:0000729 name: mouse EBF KO HPCs induced to T cell 0h sample namespace: FANTOM5 synonym: "EBF KO HPCs induced to T cell 0h" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000357 ! 0 hr sample is_a: FF:0300104 ! EBF KO HPCs induced to T cell intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000342 ! T-cell induction sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000357 ! 0 hr sample intersection_of: FF:0300104 ! EBF KO HPCs induced to T cell [Term] id: FF:0000730 name: human melanocyte (MC) sample namespace: FANTOM5 synonym: "Melanocyte (MC)" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000210 ! human sample is_a: FF:0000343 ! control treatment sample is_a: FF:0000350 ! experimentally modified sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000210 ! human sample intersection_of: FF:0000343 ! control treatment sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: derives_from CL:0000148 ! melanocyte relationship: derives_from CL:0000148 ! melanocyte [Term] id: FF:0000734 name: mouse neonate N1 sample namespace: FANTOM5 synonym: "neonate N1" EXACT [] is_a: FF:0000303 ! neonate sample - mouse [Term] id: FF:0000998 name: adult tissue sample namespace: FANTOM5 synonym: "adult tissue" EXACT [] is_a: FF:0000004 ! tissue sample relationship: derives_from UBERON:0000479 ! tissue relationship: derives_from UBERON:0007023 ! adult organism [Term] id: FF:0000999 name: fetal tissue sample namespace: FANTOM5 synonym: "fetal tissue" EXACT [] is_a: FF:0000004 ! tissue sample relationship: derives_from UBERON:0000479 ! tissue relationship: derives_from UBERON:0000922 ! embryo [Term] id: FF:0010010 name: human adipose tissue - adult sample namespace: FANTOM5 synonym: "adipose tissue - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001013 ! adipose tissue relationship: derives_from UBERON:0001013 ! adipose tissue [Term] id: FF:0010011 name: human bladder - adult sample namespace: FANTOM5 synonym: "bladder - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001255 ! urinary bladder relationship: derives_from UBERON:0001255 ! urinary bladder [Term] id: FF:0010012 name: human brain - adult sample namespace: FANTOM5 synonym: "brain - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000955 ! brain relationship: derives_from UBERON:0000955 ! brain [Term] id: FF:0010013 name: human cervix - adult sample namespace: FANTOM5 synonym: "cervix - adult" EXACT [] is_a: FF:0010100 ! human uterus - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000002 ! uterine cervix relationship: derives_from UBERON:0000002 ! uterine cervix [Term] id: FF:0010014 name: human colon - adult sample namespace: FANTOM5 synonym: "colon - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001155 ! colon relationship: derives_from UBERON:0001155 ! colon [Term] id: FF:0010015 name: human esophagus - adult sample namespace: FANTOM5 synonym: "esophagus - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001043 ! esophagus relationship: derives_from UBERON:0001043 ! esophagus [Term] id: FF:0010016 name: human heart - adult sample namespace: FANTOM5 synonym: "heart - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0010017 name: human kidney - adult sample namespace: FANTOM5 synonym: "kidney - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002113 ! kidney relationship: derives_from UBERON:0002113 ! kidney [Term] id: FF:0010018 name: human liver - adult sample namespace: FANTOM5 synonym: "liver - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0010019 name: human lung - adult sample namespace: FANTOM5 synonym: "lung - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0010020 name: human ovary - adult sample namespace: FANTOM5 synonym: "ovary - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000992 ! female gonad relationship: derives_from UBERON:0000992 ! female gonad [Term] id: FF:0010021 name: human placenta - adult sample namespace: FANTOM5 synonym: "placenta - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001987 ! placenta relationship: derives_from UBERON:0001987 ! placenta [Term] id: FF:0010022 name: human prostate - adult sample namespace: FANTOM5 synonym: "prostate - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002367 ! prostate gland relationship: derives_from UBERON:0002367 ! prostate gland [Term] id: FF:0010023 name: human skeletal muscle - adult sample namespace: FANTOM5 synonym: "skeletal muscle - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001134 ! skeletal muscle tissue relationship: derives_from UBERON:0001134 ! skeletal muscle tissue [Term] id: FF:0010024 name: human small intestine - adult sample namespace: FANTOM5 synonym: "small intestine - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002108 ! small intestine relationship: derives_from UBERON:0002108 ! small intestine [Term] id: FF:0010025 name: human spleen - adult sample namespace: FANTOM5 synonym: "spleen - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002106 ! spleen relationship: derives_from UBERON:0002106 ! spleen [Term] id: FF:0010026 name: human testis - adult sample namespace: FANTOM5 synonym: "testis - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000473 ! testis [Term] id: FF:0010027 name: thymus - adult human sample namespace: FANTOM5 synonym: "thymus - adult human" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0010028 name: human thyroid - adult sample namespace: FANTOM5 synonym: "thyroid - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002046 ! thyroid gland relationship: derives_from UBERON:0002046 ! thyroid gland [Term] id: FF:0010029 name: human trachea - adult sample namespace: FANTOM5 synonym: "trachea - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0003126 ! trachea relationship: derives_from UBERON:0003126 ! trachea [Term] id: FF:0010030 name: human retina - adult sample namespace: FANTOM5 synonym: "retina - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000966 ! retina relationship: derives_from UBERON:0000966 ! retina [Term] id: FF:0010031 name: human temporal lobe - adult sample namespace: FANTOM5 synonym: "temporal lobe - adult" EXACT [] is_a: FF:0010012 ! human brain - adult sample is_a: FF:0011525 ! cortex- adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001871 ! temporal lobe relationship: derives_from UBERON:0001871 ! temporal lobe [Term] id: FF:0010032 name: human postcentral gyrus - adult sample namespace: FANTOM5 synonym: "postcentral gyrus - adult" EXACT [] is_a: FF:0010034 ! human parietal lobe - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002581 ! postcentral gyrus relationship: derives_from UBERON:0002581 ! postcentral gyrus [Term] id: FF:0010033 name: human pons - adult sample namespace: FANTOM5 synonym: "pons - adult" EXACT [] is_a: FF:0010012 ! human brain - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000988 ! pons relationship: derives_from UBERON:0000988 ! pons [Term] id: FF:0010034 name: human parietal lobe - adult sample namespace: FANTOM5 synonym: "parietal lobe - adult" EXACT [] is_a: FF:0010012 ! human brain - adult sample is_a: FF:0011525 ! cortex- adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001872 ! parietal lobe relationship: derives_from UBERON:0001872 ! parietal lobe [Term] id: FF:0010035 name: human paracentral gyrus - adult sample namespace: FANTOM5 synonym: "paracentral gyrus - adult" EXACT [] is_a: FF:0010012 ! human brain - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0007190 ! paracentral gyrus relationship: derives_from UBERON:0007190 ! paracentral gyrus [Term] id: FF:0010036 name: human occipital pole - adult sample namespace: FANTOM5 synonym: "occipital pole - adult" EXACT [] is_a: FF:0010076 ! human occipital lobe - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002902 ! occipital pole relationship: derives_from UBERON:0002902 ! occipital pole [Term] id: FF:0010037 name: human nucleus accumbens - adult sample namespace: FANTOM5 synonym: "nucleus accumbens - adult" EXACT [] is_a: FF:0010012 ! human brain - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001882 ! nucleus accumbens relationship: derives_from UBERON:0001882 ! nucleus accumbens [Term] id: FF:0010038 name: human medulla oblongata - adult sample namespace: FANTOM5 synonym: "medulla oblongata - adult" EXACT [] is_a: FF:0010012 ! human brain - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001896 ! medulla oblongata relationship: derives_from UBERON:0001896 ! medulla oblongata [Term] id: FF:0010039 name: human insula - adult sample namespace: FANTOM5 synonym: "insula - adult" EXACT [] is_a: FF:0010012 ! human brain - adult sample is_a: FF:0011525 ! cortex- adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002022 ! insula relationship: derives_from UBERON:0002022 ! insula [Term] id: FF:0010040 name: human frontal lobe - adult sample namespace: FANTOM5 synonym: "frontal lobe - adult" EXACT [] is_a: FF:0010012 ! human brain - adult sample is_a: FF:0011525 ! cortex- adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001870 ! frontal cortex relationship: derives_from UBERON:0001870 ! frontal cortex [Term] id: FF:0010041 name: human dura mater - adult sample namespace: FANTOM5 synonym: "dura mater - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002363 ! dura mater relationship: derives_from UBERON:0002363 ! dura mater [Term] id: FF:0010042 name: human corpus callosum - adult sample namespace: FANTOM5 synonym: "corpus callosum - adult" EXACT [] is_a: FF:0010012 ! human brain - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002336 ! corpus callosum relationship: derives_from UBERON:0002336 ! corpus callosum [Term] id: FF:0010043 name: human thymus - fetal sample namespace: FANTOM5 synonym: "thymus - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0010044 name: human spleen - fetal sample namespace: FANTOM5 synonym: "spleen - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0002106 ! spleen relationship: derives_from UBERON:0002106 ! spleen [Term] id: FF:0010045 name: human kidney - fetal sample namespace: FANTOM5 synonym: "kidney - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0002113 ! kidney relationship: derives_from UBERON:0002113 ! kidney [Term] id: FF:0010046 name: human heart - fetal sample namespace: FANTOM5 synonym: "heart - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0010047 name: human tonsil - adult sample namespace: FANTOM5 synonym: "tonsil - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002372 ! tonsil relationship: derives_from UBERON:0002372 ! tonsil [Term] id: FF:0010048 name: human smooth muscle - adult sample namespace: FANTOM5 synonym: "smooth muscle - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001135 ! smooth muscle tissue relationship: derives_from UBERON:0001135 ! smooth muscle tissue [Term] id: FF:0010049 name: human pancreas - adult sample namespace: FANTOM5 synonym: "pancreas - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001264 ! pancreas relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:0010052 name: human aorta - adult sample namespace: FANTOM5 synonym: "aorta - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000947 ! aorta relationship: derives_from UBERON:0000947 ! aorta [Term] id: FF:0010053 name: human blood - adult sample namespace: FANTOM5 synonym: "blood - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000178 ! blood relationship: derives_from UBERON:0000178 ! blood [Term] id: FF:0010054 name: human eye - fetal sample namespace: FANTOM5 synonym: "eye - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0000019 ! camera-type eye relationship: derives_from UBERON:0000019 ! camera-type eye [Term] id: FF:0010055 name: human uterus - fetal sample namespace: FANTOM5 synonym: "uterus - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample relationship: derives_from UBERON:0005795 ! embryonic uterus [Term] id: FF:0010056 name: human spinal cord - fetal sample namespace: FANTOM5 synonym: "spinal cord - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0002240 ! spinal cord relationship: derives_from UBERON:0002240 ! spinal cord [Term] id: FF:0010057 name: human umbilical cord - fetal sample namespace: FANTOM5 synonym: "umbilical cord - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0002331 ! umbilical cord relationship: derives_from UBERON:0002331 ! umbilical cord [Term] id: FF:0010058 name: human trachea - fetal sample namespace: FANTOM5 synonym: "trachea - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0003126 ! trachea relationship: derives_from UBERON:0003126 ! trachea [Term] id: FF:0010059 name: human tongue - fetal sample namespace: FANTOM5 synonym: "tongue - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0001723 ! tongue relationship: derives_from UBERON:0001723 ! tongue [Term] id: FF:0010060 name: human thyroid - fetal sample namespace: FANTOM5 synonym: "thyroid - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0002046 ! thyroid gland relationship: derives_from UBERON:0002046 ! thyroid gland [Term] id: FF:0010061 name: human throat - fetal sample namespace: FANTOM5 synonym: "throat - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0000341 ! throat relationship: derives_from UBERON:0000341 ! throat [Term] id: FF:0010062 name: human stomach - fetal sample namespace: FANTOM5 synonym: "stomach - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0000945 ! stomach relationship: derives_from UBERON:0000945 ! stomach [Term] id: FF:0010063 name: human duodenum - fetal sample namespace: FANTOM5 synonym: "duodenum - fetal" EXACT [] is_a: FF:0010064 ! human small intestine - fetal sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0002114 ! duodenum relationship: derives_from UBERON:0002114 ! duodenum [Term] id: FF:0010064 name: human small intestine - fetal sample namespace: FANTOM5 synonym: "small intestine - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0002108 ! small intestine relationship: derives_from UBERON:0002108 ! small intestine [Term] id: FF:0010065 name: human skin - fetal sample namespace: FANTOM5 synonym: "skin - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0000014 ! zone of skin relationship: derives_from UBERON:0000014 ! zone of skin [Term] id: FF:0010066 name: human skeletal muscle - fetal sample namespace: FANTOM5 synonym: "skeletal muscle - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0001134 ! skeletal muscle tissue relationship: derives_from UBERON:0001134 ! skeletal muscle tissue [Term] id: FF:0010067 name: human rectum - fetal sample namespace: FANTOM5 synonym: "rectum - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0001052 ! rectum relationship: derives_from UBERON:0001052 ! rectum [Term] id: FF:0010068 name: human lung - fetal sample namespace: FANTOM5 synonym: "lung - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0010069 name: human diaphragm - fetal sample namespace: FANTOM5 synonym: "diaphragm - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0001103 ! diaphragm relationship: derives_from UBERON:0001103 ! diaphragm [Term] id: FF:0010070 name: human colon - fetal sample namespace: FANTOM5 synonym: "colon - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0001155 ! colon relationship: derives_from UBERON:0001155 ! colon [Term] id: FF:0010071 name: human temporal lobe - fetal sample namespace: FANTOM5 synonym: "temporal lobe - fetal" EXACT [] is_a: FF:0010085 ! human brain - fetal sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0001871 ! temporal lobe relationship: derives_from UBERON:0001871 ! temporal lobe [Term] id: FF:0010072 name: human parietal lobe - fetal sample namespace: FANTOM5 synonym: "parietal lobe - fetal" EXACT [] is_a: FF:0010085 ! human brain - fetal sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0001872 ! parietal lobe relationship: derives_from UBERON:0001872 ! parietal lobe [Term] id: FF:0010073 name: human occipital lobe - fetal sample namespace: FANTOM5 synonym: "occipital lobe - fetal" EXACT [] is_a: FF:0010085 ! human brain - fetal sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0002021 ! occipital lobe relationship: derives_from UBERON:0002021 ! occipital lobe [Term] id: FF:0010074 name: human skin - adult sample namespace: FANTOM5 synonym: "skin - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000014 ! zone of skin relationship: derives_from UBERON:0000014 ! zone of skin [Term] id: FF:0010076 name: human occipital lobe - adult sample namespace: FANTOM5 synonym: "occipital lobe - adult" EXACT [] is_a: FF:0010012 ! human brain - adult sample is_a: FF:0011525 ! cortex- adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002021 ! occipital lobe relationship: derives_from UBERON:0002021 ! occipital lobe [Term] id: FF:0010077 name: human lymph node - adult sample namespace: FANTOM5 synonym: "lymph node - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000029 ! lymph node relationship: derives_from UBERON:0000029 ! lymph node [Term] id: FF:0010078 name: human left ventricle - adult sample namespace: FANTOM5 synonym: "left ventricle - adult" EXACT [] is_a: FF:0010016 ! human heart - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002084 ! heart left ventricle relationship: derives_from UBERON:0002084 ! heart left ventricle [Term] id: FF:0010079 name: human left atrium - adult sample namespace: FANTOM5 synonym: "left atrium - adult" EXACT [] is_a: FF:0010016 ! human heart - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002079 ! left cardiac atrium relationship: derives_from UBERON:0002079 ! left cardiac atrium [Term] id: FF:0010080 name: human breast - adult sample namespace: FANTOM5 synonym: "breast - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000310 ! breast relationship: derives_from UBERON:0000310 ! breast [Term] id: FF:0010081 name: human adrenal gland - adult sample namespace: FANTOM5 synonym: "adrenal gland - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002369 ! adrenal gland relationship: derives_from UBERON:0002369 ! adrenal gland [Term] id: FF:0010083 name: human cerebellum - adult sample namespace: FANTOM5 synonym: "cerebellum - adult" EXACT [] is_a: FF:0010012 ! human brain - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002037 ! cerebellum relationship: derives_from UBERON:0002037 ! cerebellum [Term] id: FF:0010085 name: human brain - fetal sample namespace: FANTOM5 synonym: "brain - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0000955 ! brain relationship: derives_from UBERON:0000955 ! brain [Term] id: FF:0010086 name: human liver - fetal sample namespace: FANTOM5 synonym: "liver - fetal" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000999 ! fetal tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000999 ! fetal tissue sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0010087 name: human putamen - adult donor sample namespace: FANTOM5 synonym: "putamen - adult donor" EXACT [] is_a: FF:0010012 ! human brain - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001874 ! putamen relationship: derives_from UBERON:0001874 ! putamen [Term] id: FF:0010093 name: human salivary gland - adult sample namespace: FANTOM5 synonym: "salivary gland - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001044 ! salivary gland relationship: derives_from UBERON:0001044 ! salivary gland [Term] id: FF:0010100 name: human uterus - adult sample namespace: FANTOM5 synonym: "uterus - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000995 ! uterus relationship: derives_from UBERON:0000995 ! uterus [Term] id: FF:0010150 name: human medial temporal gyrus - adult sample namespace: FANTOM5 synonym: "medial temporal gyrus - adult" EXACT [] is_a: FF:0010031 ! human temporal lobe - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002771 ! middle temporal gyrus relationship: derives_from UBERON:0002771 ! middle temporal gyrus [Term] id: FF:0010151 name: human amygdala - adult donor sample namespace: FANTOM5 synonym: "amygdala - adult donor" EXACT [] is_a: FF:0010031 ! human temporal lobe - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001876 ! amygdala relationship: derives_from UBERON:0001876 ! amygdala [Term] id: FF:0010153 name: hippocampus - adult sample namespace: FANTOM5 synonym: "hippocampus - adult" EXACT [] is_a: FF:0011525 ! cortex- adult sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001954 ! Ammon's horn relationship: derives_from UBERON:0001954 ! Ammon's horn [Term] id: FF:0010154 name: human thalamus - adult donor sample namespace: FANTOM5 synonym: "thalamus - adult donor" EXACT [] is_a: FF:0010193 ! human diencephalon - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001897 ! thalamus relationship: derives_from UBERON:0001897 ! thalamus [Term] id: FF:0010156 name: human medial temporal gyrus donor sample namespace: FANTOM5 synonym: "medial temporal gyrus donor" EXACT [] is_a: FF:0010150 ! human medial temporal gyrus - adult sample relationship: derives_from UBERON:0002771 ! middle temporal gyrus [Term] id: FF:0010158 name: human substantia nigra - adult donor sample namespace: FANTOM5 synonym: "substantia nigra - adult donor" EXACT [] is_a: FF:0010012 ! human brain - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002038 ! substantia nigra relationship: derives_from UBERON:0002038 ! substantia nigra [Term] id: FF:0010159 name: human spinal cord - adult sample namespace: FANTOM5 synonym: "spinal cord - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002240 ! spinal cord relationship: derives_from UBERON:0002240 ! spinal cord [Term] id: FF:0010160 name: human pineal gland - adult sample namespace: FANTOM5 synonym: "pineal gland - adult" EXACT [] is_a: FF:0010193 ! human diencephalon - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001905 ! pineal body relationship: derives_from UBERON:0001905 ! pineal body [Term] id: FF:0010161 name: human globus pallidus - adult donor sample namespace: FANTOM5 synonym: "globus pallidus - adult donor" EXACT [] is_a: FF:0010012 ! human brain - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001875 ! globus pallidus relationship: derives_from UBERON:0001875 ! globus pallidus [Term] id: FF:0010162 name: human pituitary gland - adult sample namespace: FANTOM5 synonym: "pituitary gland - adult" EXACT [] is_a: FF:0010193 ! human diencephalon - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000007 ! pituitary gland relationship: derives_from UBERON:0000007 ! pituitary gland [Term] id: FF:0010164 name: human caudate nucleus - adult donor sample namespace: FANTOM5 synonym: "caudate nucleus - adult donor" EXACT [] is_a: FF:0010012 ! human brain - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001873 ! caudate nucleus relationship: derives_from UBERON:0001873 ! caudate nucleus [Term] id: FF:0010188 name: human cerebral meninges - adult sample namespace: FANTOM5 synonym: "cerebral meninges - adult" EXACT [] is_a: FF:0010012 ! human brain - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001893 ! telencephalon intersection_of: derives_from UBERON:0002360 ! meninx relationship: derives_from UBERON:0001893 ! telencephalon relationship: derives_from UBERON:0002360 ! meninx [Term] id: FF:0010189 name: human appendix - adult sample namespace: FANTOM5 synonym: "appendix - adult" EXACT [] is_a: FF:0010014 ! human colon - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001154 ! vermiform appendix relationship: derives_from UBERON:0001154 ! vermiform appendix [Term] id: FF:0010190 name: human artery - adult sample namespace: FANTOM5 synonym: "artery - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001637 ! artery relationship: derives_from UBERON:0001637 ! artery [Term] id: FF:0010191 name: human vein - adult sample namespace: FANTOM5 synonym: "vein - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001638 ! vein relationship: derives_from UBERON:0001638 ! vein [Term] id: FF:0010192 name: human bone marrow - adult sample namespace: FANTOM5 synonym: "bone marrow - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002371 ! bone marrow relationship: derives_from UBERON:0002371 ! bone marrow [Term] id: FF:0010193 name: human diencephalon - adult sample namespace: FANTOM5 synonym: "diencephalon - adult" EXACT [] is_a: FF:0010012 ! human brain - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001894 ! diencephalon relationship: derives_from UBERON:0001894 ! diencephalon [Term] id: FF:0010195 name: human olfactory region - adult sample namespace: FANTOM5 synonym: "olfactory region - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0003112 ! olfactory region relationship: derives_from UBERON:0003112 ! olfactory region [Term] id: FF:0010196 name: human ductus deferens - adult sample namespace: FANTOM5 synonym: "ductus deferens - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001000 ! vas deferens relationship: derives_from UBERON:0001000 ! vas deferens [Term] id: FF:0010198 name: human gall bladder - adult sample namespace: FANTOM5 synonym: "gall bladder - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002110 ! gallbladder relationship: derives_from UBERON:0002110 ! gallbladder [Term] id: FF:0010199 name: human parotid gland - adult sample namespace: FANTOM5 synonym: "parotid gland - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001831 ! parotid gland relationship: derives_from UBERON:0001831 ! parotid gland [Term] id: FF:0010200 name: human penis - adult sample namespace: FANTOM5 synonym: "penis - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000989 ! penis relationship: derives_from UBERON:0000989 ! penis [Term] id: FF:0010201 name: human seminal vesicle - adult sample namespace: FANTOM5 synonym: "seminal vesicle - adult" EXACT [] is_a: FF:0010026 ! human testis - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000998 ! seminal vesicle relationship: derives_from UBERON:0000998 ! seminal vesicle [Term] id: FF:0010202 name: human submaxillary gland - adult sample namespace: FANTOM5 synonym: "submaxillary gland - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001736 ! submandibular gland relationship: derives_from UBERON:0001736 ! submandibular gland [Term] id: FF:0010203 name: human tongue - adult sample namespace: FANTOM5 synonym: "tongue - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001723 ! tongue relationship: derives_from UBERON:0001723 ! tongue [Term] id: FF:0010204 name: human vagina - adult sample namespace: FANTOM5 synonym: "vagina - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000996 ! vagina relationship: derives_from UBERON:0000996 ! vagina [Term] id: FF:0010205 name: human heart, mitral valve - adult sample namespace: FANTOM5 synonym: "heart, mitral valve - adult" EXACT [] is_a: FF:0010079 ! human left atrium - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002135 ! mitral valve relationship: derives_from UBERON:0002135 ! mitral valve [Term] id: FF:0010206 name: human heart, pulmonic valve - adult sample namespace: FANTOM5 synonym: "heart, pulmonic valve - adult" EXACT [] is_a: FF:0010016 ! human heart - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002146 ! pulmonary valve relationship: derives_from UBERON:0002146 ! pulmonary valve [Term] id: FF:0010207 name: human heart, tricuspid valve - adult sample namespace: FANTOM5 synonym: "heart, tricuspid valve - adult" EXACT [] is_a: FF:0010016 ! human heart - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002134 ! tricuspid valve relationship: derives_from UBERON:0002134 ! tricuspid valve [Term] id: FF:0010209 name: human throat - adult sample namespace: FANTOM5 synonym: "throat - adult" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000341 ! throat relationship: derives_from UBERON:0000341 ! throat [Term] id: FF:0011100 name: human CD14-CD16-positive Monocytes sample namespace: FANTOM synonym: "CD14-CD16-positive Monocytes" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002397 ! CD14-positive, CD16-positive monocyte relationship: derives_from CL:0002397 ! CD14-positive, CD16-positive monocyte [Term] id: FF:0011101 name: human CD14-positive monocytes - mock treated sample namespace: FANTOM synonym: "CD14-positive monocytes - mock treated" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000343 ! control treatment sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0011111 ! human CD14-positive CD16-negative Monocytes sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000343 ! control treatment sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte relationship: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte [Term] id: FF:0011102 name: human CD14-positive monocytes - treated with B-glucan sample namespace: FANTOM synonym: "CD14-positive monocytes - treated with B-glucan" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000630 ! beta-glucan treatment sample is_a: FF:0011111 ! human CD14-positive CD16-negative Monocytes sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000630 ! beta-glucan treatment sample intersection_of: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte relationship: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte [Term] id: FF:0011103 name: human CD14-positive monocytes - treated with BCG sample namespace: FANTOM synonym: "CD14-positive monocytes - treated with BCG" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000628 ! Bacillus Calmette-Guerin treatment sample is_a: FF:0011111 ! human CD14-positive CD16-negative Monocytes sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000628 ! Bacillus Calmette-Guerin treatment sample intersection_of: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte relationship: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte [Term] id: FF:0011104 name: human CD14-positive monocytes - treated with Candida sample namespace: FANTOM synonym: "CD14-positive monocytes - treated with Candida" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000635 ! Candida treatment sample is_a: FF:0011111 ! human CD14-positive CD16-negative Monocytes sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000635 ! Candida treatment sample intersection_of: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte relationship: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte [Term] id: FF:0011105 name: human CD14-positive monocytes - treated with Cryptococcus sample namespace: FANTOM synonym: "CD14-positive monocytes - treated with Cryptococcus" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000634 ! Cryptococcus treatment sample is_a: FF:0011111 ! human CD14-positive CD16-negative Monocytes sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000634 ! Cryptococcus treatment sample intersection_of: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte relationship: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte [Term] id: FF:0011106 name: human CD14-positive monocytes - treated with Group A streptococci sample namespace: FANTOM synonym: "CD14-positive monocytes - treated with Group A streptococci" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000632 ! group A streptococci treatment sample is_a: FF:0011111 ! human CD14-positive CD16-negative Monocytes sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000632 ! group A streptococci treatment sample intersection_of: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte relationship: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte [Term] id: FF:0011108 name: human CD14-positive monocytes - treated with lipopolysaccharide sample namespace: FANTOM synonym: "CD14-positive monocytes - treated with lipopolysaccharide" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000335 ! LPS treatment sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0011111 ! human CD14-positive CD16-negative Monocytes sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000335 ! LPS treatment sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte relationship: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte [Term] id: FF:0011109 name: human CD14-positive monocytes - treated with Salmonella sample namespace: FANTOM synonym: "CD14-positive monocytes - treated with Salmonella" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000633 ! Salmonella treatment sample is_a: FF:0011111 ! human CD14-positive CD16-negative Monocytes sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000633 ! Salmonella treatment sample intersection_of: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte relationship: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte [Term] id: FF:0011111 name: human CD14-positive CD16-negative Monocytes sample namespace: FANTOM synonym: "CD14-positiveCD16- Monocytes" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte relationship: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte [Term] id: FF:0011113 name: mouse CD326-positive enterocyte isolated from mice- treated with RANKL- day03 sample namespace: FANTOM synonym: "CD326-positive enterocyte isolated from mice- treated with RANKL- day03" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000383 ! 3 days sample is_a: FF:0000627 ! RANK ligand treatment sample is_a: FF:0011149 ! mouse CD326-positive enterocyte sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000383 ! 3 days sample intersection_of: FF:0000627 ! RANK ligand treatment sample intersection_of: derives_from CL:0000584 ! enterocyte relationship: derives_from CL:0000584 ! enterocyte [Term] id: FF:0011122 name: human CD4-positiveCD25-CD45RA- naive conventional T cells sample namespace: FANTOM synonym: "CD4-positiveCD25-CD45RA- naive conventional T cells" EXACT [] is_a: FF:0000031 ! CD4-positive T cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0000895 ! naive thymus-derived CD4-positive, alpha-beta T cell relationship: derives_from CL:0000895 ! naive thymus-derived CD4-positive, alpha-beta T cell [Term] id: FF:0011128 name: human CD4-positiveCD25-positiveCD45RA- naive regulatory T cells sample namespace: FANTOM synonym: "CD4-positiveCD25-positiveCD45RA- naive regulatory T cells" EXACT [] is_a: FF:0000031 ! CD4-positive T cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002677 ! naive regulatory T cell relationship: derives_from CL:0002677 ! naive regulatory T cell [Term] id: FF:0011131 name: mouse CD41-positive megakaryocyte cancer sample namespace: FANTOM synonym: "CD41-positive megakaryocyte cancer" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0002027 ! CD9-positive, CD41-positive megakaryocyte cell intersection_of: is_model_for DOID:162 ! cancer relationship: derives_from CL:0002027 ! CD9-positive, CD41-positive megakaryocyte cell relationship: is_model_for DOID:162 ! cancer [Term] id: FF:0011132 name: human Hep-2 cells mock treated sample namespace: FANTOM synonym: "Hep-2 cells mock treated" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000210 ! human sample is_a: FF:0000343 ! control treatment sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0104978 ! HEp-2 cell sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000210 ! human sample intersection_of: FF:0000343 ! control treatment sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0104978 ! HEp-2 cell sample [Term] id: FF:0011133 name: human Hep-2 cells treated with Streptococci strain 5448 sample namespace: FANTOM synonym: "Hep-2 cells treated with Streptococci strain 5448" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000210 ! human sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000638 ! Streptococcus strain 5448 treatment sample is_a: FF:0104978 ! HEp-2 cell sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000210 ! human sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000638 ! Streptococcus strain 5448 treatment sample intersection_of: FF:0104978 ! HEp-2 cell sample [Term] id: FF:0011134 name: human Hep-2 cells treated with Streptococci strain JRS4 sample namespace: FANTOM synonym: "Hep-2 cells treated with Streptococci strain JRS4" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000210 ! human sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000639 ! Streptococcus strain JRS4 treatment sample is_a: FF:0104978 ! HEp-2 cell sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000210 ! human sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000639 ! Streptococcus strain JRS4 treatment sample intersection_of: FF:0104978 ! HEp-2 cell sample [Term] id: FF:0011135 name: human immature langerhans cells sample namespace: FANTOM synonym: "immature langerhans cells" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0001016 ! immature CD1a-positive Langerhans cell relationship: derives_from CL:0001016 ! immature CD1a-positive Langerhans cell [Term] id: FF:0011136 name: human migratory langerhans cells sample namespace: FANTOM comment: todo - request from CL synonym: "migratory langerhans cells" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample relationship: derives_from CL:0000453 ! Langerhans cell [Term] id: FF:0011137 name: mouse natural helper cells- IL2 treated sample namespace: FANTOM synonym: "natural helper cells- IL2 treated" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000636 ! IL-2 treatment sample is_a: FF:0011140 ! mouse natural helper cells- naive sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000636 ! IL-2 treatment sample intersection_of: derives_from CL:0002679 ! natural helper lymphocyte relationship: derives_from CL:0002679 ! natural helper lymphocyte [Term] id: FF:0011140 name: mouse natural helper cells- naive sample namespace: FANTOM synonym: "natural helper cells- naive" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0002679 ! natural helper lymphocyte relationship: derives_from CL:0002679 ! natural helper lymphocyte [Term] id: FF:0011142 name: mouse neurospheres - enteric neuron derived sample namespace: FANTOM synonym: "neurospheres - enteric neuron derived" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0300105 ! mouse neurospheres sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0300105 ! mouse neurospheres sample intersection_of: derives_from UBERON:0002005 ! enteric nervous system relationship: derives_from UBERON:0002005 ! enteric nervous system [Term] id: FF:0011143 name: mouse neurospheres - parasympathetic neuron derived sample namespace: FANTOM synonym: "neurospheres - parasympathetic neuron derived" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0300105 ! mouse neurospheres sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0300105 ! mouse neurospheres sample intersection_of: derives_from UBERON:0000011 ! parasympathetic nervous system relationship: derives_from UBERON:0000011 ! parasympathetic nervous system [Term] id: FF:0011144 name: mouse neurospheres - sympathetic neuron derived sample namespace: FANTOM synonym: "neurospheres - sympathetic neuron derived" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0300105 ! mouse neurospheres sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0300105 ! mouse neurospheres sample intersection_of: derives_from UBERON:0000013 ! sympathetic nervous system relationship: derives_from UBERON:0000013 ! sympathetic nervous system [Term] id: FF:0011147 name: human achilles tendon sample namespace: FANTOM synonym: "achilles tendon" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0003701 ! calcaneal tendon relationship: derives_from UBERON:0003701 ! calcaneal tendon [Term] id: FF:0011149 name: mouse CD326-positive enterocyte sample namespace: FANTOM synonym: "CD326-positive enterocyte" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: derives_from CL:0000584 ! enterocyte relationship: derives_from CL:0000584 ! enterocyte [Term] id: FF:0011151 name: human cerebrospinal fluid sample namespace: FANTOM synonym: "cerebrospinal fluid" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001359 ! cerebrospinal fluid relationship: derives_from UBERON:0001359 ! cerebrospinal fluid [Term] id: FF:0011152 name: human cruciate ligament sample namespace: FANTOM synonym: "cruciate ligament" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0006659 ! cruciate ligament of knee relationship: derives_from UBERON:0006659 ! cruciate ligament of knee [Term] id: FF:0011153 name: human eye - muscle inferior rectus sample namespace: FANTOM synonym: "eye - muscle inferior rectus" EXACT [] is_a: FF:0010023 ! human skeletal muscle - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0006322 ! inferior rectus extraocular muscle relationship: derives_from UBERON:0006322 ! inferior rectus extraocular muscle [Term] id: FF:0011154 name: human eye - muscle lateral sample namespace: FANTOM synonym: "eye - muscle lateral" EXACT [] is_a: FF:0010023 ! human skeletal muscle - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001603 ! lateral rectus extra-ocular muscle relationship: derives_from UBERON:0001603 ! lateral rectus extra-ocular muscle [Term] id: FF:0011155 name: human eye - muscle medial sample namespace: FANTOM synonym: "eye - muscle medial" EXACT [] is_a: FF:0010023 ! human skeletal muscle - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001602 ! medial rectus extraocular muscle relationship: derives_from UBERON:0001602 ! medial rectus extraocular muscle [Term] id: FF:0011156 name: human eye - muscle superior sample namespace: FANTOM synonym: "eye - muscle superior" EXACT [] is_a: FF:0010023 ! human skeletal muscle - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0006323 ! superior rectus extraocular muscle relationship: derives_from UBERON:0006323 ! superior rectus extraocular muscle [Term] id: FF:0011157 name: human eye - vitreous humor sample namespace: FANTOM synonym: "eye - vitreous humor" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001797 ! vitreous humor relationship: derives_from UBERON:0001797 ! vitreous humor [Term] id: FF:0011159 name: mouse GP2-positive M cell sample namespace: FANTOM synonym: "GP2-positive M cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample relationship: derives_from CL:0000682 ! M cell of gut [Term] id: FF:0011161 name: Mouse hepatic Sinusoidal Endothelial Cells sample namespace: FANTOM synonym: "Mouse hepatic Sinusoidal Endothelial Cells" EXACT [] is_a: FF:0000076 ! hepatic sinusoidal endothelial cell sample is_a: FF:0000109 ! mouse hepatocyte sample intersection_of: FF:0000076 ! hepatic sinusoidal endothelial cell sample intersection_of: FF:0000103 ! mouse sample [Term] id: FF:0011166 name: human optic nerve sample namespace: FANTOM synonym: "optic nerve" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000941 ! cranial nerve II relationship: derives_from UBERON:0000941 ! cranial nerve II [Term] id: FF:0011169 name: human reticulocyte sample namespace: FANTOM synonym: "Reticulocytes" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from CL:0000558 ! reticulocyte relationship: derives_from CL:0000558 ! reticulocyte [Term] id: FF:0011173 name: human skeletal muscle - soleus muscle sample namespace: FANTOM synonym: "skeletal muscle - soleus muscle" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001389 ! soleus muscle relationship: derives_from UBERON:0001389 ! soleus muscle [Term] id: FF:0011177 name: human Skin - palm sample namespace: FANTOM synonym: "Skin - palm" EXACT [] is_a: FF:0010074 ! human skin - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0013777 ! skin of palm of manus relationship: derives_from UBERON:0013777 ! skin of palm of manus [Term] id: FF:0011181 name: human Urethra sample namespace: FANTOM synonym: "Urethra" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000057 ! urethra relationship: derives_from UBERON:0000057 ! urethra [Term] id: FF:0011194 name: mouse trophoblast stem cell line R1AB differentiation- day00 sample namespace: FANTOM synonym: "trophoblast stem cell line R1AB differentiation- day00" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000380 ! 0 days sample is_a: FF:0000643 ! mouse trophoblast stem cell line R1AB sample is_a: FF:0000644 ! trophoblast cell line differentiation sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000380 ! 0 days sample intersection_of: FF:0000643 ! mouse trophoblast stem cell line R1AB sample intersection_of: FF:0000644 ! trophoblast cell line differentiation sample [Term] id: FF:0011201 name: mouse trophoblast stem cell line Rybp differentiation- day00 sample namespace: FANTOM synonym: "trophoblast stem cell line Rybp differentiation- day00" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000380 ! 0 days sample is_a: FF:0000642 ! mouse trophoblast stem cell line Rybp sample is_a: FF:0000644 ! trophoblast cell line differentiation sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000380 ! 0 days sample intersection_of: FF:0000642 ! mouse trophoblast stem cell line Rybp sample intersection_of: FF:0000644 ! trophoblast cell line differentiation sample [Term] id: FF:0011215 name: human Monocyte-derived macrophages 0h after udorn influenza infection sample namespace: FANTOM synonym: "Monocyte-derived macrophages 0h after udorn influenza infection" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000086 ! human macrophage sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000357 ! 0 hr sample is_a: FF:0000647 ! udorn influenza infection sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000086 ! human macrophage sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000357 ! 0 hr sample intersection_of: FF:0000647 ! udorn influenza infection sample [Term] id: FF:0011232 name: mouse tracheal ciliated cells differentiation after 0hr sample namespace: FANTOM synonym: "tracheal ciliated cells differentiation after 0hr" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000103 ! mouse sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000357 ! 0 hr sample is_a: FF:0000645 ! tracheal ciliated cell differentiation sample is_a: FF:0000652 ! tracheal ciliated cell line sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000357 ! 0 hr sample intersection_of: FF:0000645 ! tracheal ciliated cell differentiation sample intersection_of: FF:0000652 ! tracheal ciliated cell line sample [Term] id: FF:0011250 name: mouse cerebellum- neonate N30 sample namespace: FANTOM synonym: "cerebellum- neonate N30" EXACT [] is_a: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0002037 ! cerebellum relationship: derives_from UBERON:0002037 ! cerebellum [Term] id: FF:0011251 name: mouse pancreas- neonate N01 sample namespace: FANTOM synonym: "pancreas- neonate N01" EXACT [] is_a: FF:0000734 ! mouse neonate N1 sample intersection_of: FF:0000734 ! mouse neonate N1 sample intersection_of: derives_from UBERON:0001264 ! pancreas relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:0011252 name: mouse eyeball- neonate N01 sample namespace: FANTOM synonym: "eyeball- neonate N01" EXACT [] is_a: FF:0000734 ! mouse neonate N1 sample intersection_of: FF:0000734 ! mouse neonate N1 sample intersection_of: derives_from UBERON:0010230 ! eyeball of camera-type eye relationship: derives_from UBERON:0010230 ! eyeball of camera-type eye [Term] id: FF:0011253 name: mouse pancreas- embryo E18 sample namespace: FANTOM synonym: "pancreas- embryo E18" EXACT [] is_a: FF:0000302 ! mouse embryonic day 18 sample intersection_of: FF:0000302 ! mouse embryonic day 18 sample intersection_of: derives_from UBERON:0001264 ! pancreas relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:0011254 name: mouse pancreas- neonate N02 sample namespace: FANTOM synonym: "pancreas- neonate N02" EXACT [] is_a: FF:0000307 ! mouse neonate N2 sample intersection_of: FF:0000307 ! mouse neonate N2 sample intersection_of: derives_from UBERON:0001264 ! pancreas relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:0011255 name: mouse pancreas- neonate N30 sample namespace: FANTOM synonym: "pancreas- neonate N30" EXACT [] is_a: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0001264 ! pancreas relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:0011256 name: mouse pancreas- neonate N25 sample namespace: FANTOM synonym: "pancreas- neonate N25" EXACT [] is_a: FF:0000309 ! mouse neonate N25 sample intersection_of: FF:0000309 ! mouse neonate N25 sample intersection_of: derives_from UBERON:0001264 ! pancreas relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:0011257 name: mouse pancreas- embryo E15 sample namespace: FANTOM synonym: "pancreas- embryo E15" EXACT [] is_a: FF:0000298 ! mouse embryonic day 15 sample intersection_of: FF:0000298 ! mouse embryonic day 15 sample intersection_of: derives_from UBERON:0001264 ! pancreas relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:0011258 name: mouse pancreas- embryo E17 sample namespace: FANTOM synonym: "pancreas- embryo E17" EXACT [] is_a: FF:0000300 ! mouse embryonic day 17 sample intersection_of: FF:0000300 ! mouse embryonic day 17 sample intersection_of: derives_from UBERON:0001264 ! pancreas relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:0011262 name: mouse pancreas- embryo E14 sample namespace: FANTOM synonym: "pancreas- embryo E14" EXACT [] is_a: FF:0000296 ! mouse embryonic day 14 sample intersection_of: FF:0000296 ! mouse embryonic day 14 sample intersection_of: derives_from UBERON:0001264 ! pancreas relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:0011263 name: mouse pancreas- embryo E16 sample namespace: FANTOM synonym: "pancreas- embryo E16" EXACT [] is_a: FF:0000299 ! mouse embryonic day 16 sample intersection_of: FF:0000299 ! mouse embryonic day 16 sample intersection_of: derives_from UBERON:0001264 ! pancreas relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:0011264 name: mouse eyeball- neonate N00 sample namespace: FANTOM synonym: "eyeball- neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0010230 ! eyeball of camera-type eye relationship: derives_from UBERON:0010230 ! eyeball of camera-type eye [Term] id: FF:0011265 name: mouse intestine- neonate N00 sample namespace: FANTOM synonym: "intestine- neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0011266 name: mouse pancreas- neonate N00 sample namespace: FANTOM synonym: "pancreas- neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0001264 ! pancreas relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:0011267 name: mouse pancreas- neonate N16 sample namespace: FANTOM synonym: "pancreas- neonate N16" EXACT [] is_a: FF:0000306 ! mouse neonate N16 sample intersection_of: FF:0000306 ! mouse neonate N16 sample intersection_of: derives_from UBERON:0001264 ! pancreas relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:0011268 name: mouse visual cortex from wildtype- neonate N15 sample namespace: FANTOM synonym: "visual cortex from wildtype- neonate N15" EXACT [] is_a: FF:0000316 ! mouse neonate N15 sample is_a: FF:0300106 ! mouse wildtype sample intersection_of: FF:0000316 ! mouse neonate N15 sample intersection_of: FF:0300106 ! mouse wildtype sample intersection_of: derives_from UBERON:0000411 ! visual cortex relationship: derives_from UBERON:0000411 ! visual cortex [Term] id: FF:0011269 name: mouse visual cortex from wildtype- neonate N30 sample namespace: FANTOM synonym: "visual cortex from wildtype- neonate N30" EXACT [] is_a: FF:0011469 ! mouse cortex- neonate N30 sample is_a: FF:0300106 ! mouse wildtype sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0300106 ! mouse wildtype sample intersection_of: derives_from UBERON:0000411 ! visual cortex relationship: derives_from UBERON:0000411 ! visual cortex [Term] id: FF:0011270 name: mouse visual cortex from wildtype- neonate N60-70 sample namespace: FANTOM synonym: "visual cortex from wildtype- neonate N60-70" EXACT [] is_a: FF:0000315 ! mouse neonate N60-70 sample is_a: FF:0011525 ! cortex- adult sample is_a: FF:0300106 ! mouse wildtype sample intersection_of: FF:0000315 ! mouse neonate N60-70 sample intersection_of: FF:0300106 ! mouse wildtype sample intersection_of: derives_from UBERON:0000411 ! visual cortex relationship: derives_from UBERON:0000411 ! visual cortex [Term] id: FF:0011274 name: mouse Ileum epithelium sample namespace: FANTOM synonym: "Ileum epithelium" EXACT [] is_a: FF:0011436 ! mouse intestinal mucosa- adult sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0008345 ! ileal epithelium relationship: derives_from UBERON:0008345 ! ileal epithelium [Term] id: FF:0011275 name: mouse trophoblast stem cell line B1 differentiation- day00 sample namespace: FANTOM synonym: "trophoblast stem cell line B1 differentiation- day00" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000380 ! 0 days sample is_a: FF:0000641 ! mouse trophoblast stem cell line B1 sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000380 ! 0 days sample intersection_of: FF:0000641 ! mouse trophoblast stem cell line B1 sample [Term] id: FF:0011276 name: mouse cerebellum - adult sample namespace: FANTOM synonym: "mouse cerebellum - adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002037 ! cerebellum relationship: derives_from UBERON:0002037 ! cerebellum [Term] id: FF:0011277 name: mouse forelimb- embryo E17 sample namespace: FANTOM synonym: "forelimb- embryo E17" EXACT [] is_a: FF:0000300 ! mouse embryonic day 17 sample intersection_of: FF:0000300 ! mouse embryonic day 17 sample intersection_of: derives_from UBERON:0002102 ! forelimb relationship: derives_from UBERON:0002102 ! forelimb [Term] id: FF:0011278 name: mouse forelimb- embryo E18 sample namespace: FANTOM synonym: "forelimb- embryo E18" EXACT [] is_a: FF:0000302 ! mouse embryonic day 18 sample intersection_of: FF:0000302 ! mouse embryonic day 18 sample intersection_of: derives_from UBERON:0002102 ! forelimb relationship: derives_from UBERON:0002102 ! forelimb [Term] id: FF:0011280 name: mouse thymus- neonate N02 sample namespace: FANTOM synonym: "thymus- neonate N02" EXACT [] is_a: FF:0000307 ! mouse neonate N2 sample intersection_of: FF:0000307 ! mouse neonate N2 sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0011281 name: mouse eyeball- neonate N02 sample namespace: FANTOM synonym: "eyeball- neonate N02" EXACT [] is_a: FF:0000307 ! mouse neonate N2 sample intersection_of: FF:0000307 ! mouse neonate N2 sample intersection_of: derives_from UBERON:0010230 ! eyeball of camera-type eye relationship: derives_from UBERON:0010230 ! eyeball of camera-type eye [Term] id: FF:0011282 name: mouse gonad- embryo E13 sample namespace: FANTOM synonym: "gonad- embryo E13" EXACT [] is_a: FF:0000293 ! mouse embryonic day 13 sample intersection_of: FF:0000293 ! mouse embryonic day 13 sample intersection_of: derives_from UBERON:0000991 ! gonad relationship: derives_from UBERON:0000991 ! gonad [Term] id: FF:0011283 name: mouse corpora quadrigemina- adult sample namespace: FANTOM synonym: "corpora quadrigemina- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002259 ! corpora quadrigemina relationship: derives_from UBERON:0002259 ! corpora quadrigemina [Term] id: FF:0011284 name: mouse medulla oblongata- adult sample namespace: FANTOM synonym: "medulla oblongata- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001896 ! medulla oblongata relationship: derives_from UBERON:0001896 ! medulla oblongata [Term] id: FF:0011285 name: mouse intestine- adult sample namespace: FANTOM synonym: "intestine- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0011286 name: mouse olfactory brain- adult sample namespace: FANTOM synonym: "olfactory brain- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0005366 ! olfactory lobe relationship: derives_from UBERON:0005366 ! olfactory lobe [Term] id: FF:0011287 name: mouse fibroblast cell line: CRL-1658 NIH/3T3 sample namespace: FANTOM synonym: "mouse fibroblast cell line: CRL-1658 NIH/3T3" EXACT [] is_a: EFO:0002091 ! biological replicate is_a: FF:0000003 ! cell line sample is_a: FF:0000103 ! mouse sample [Term] id: FF:0011288 name: mouse corpus striatum- adult sample namespace: FANTOM synonym: "corpus striatum- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000369 ! corpus striatum relationship: derives_from UBERON:0000369 ! corpus striatum [Term] id: FF:0011289 name: epididymis- adult sample namespace: FANTOM alt_id: FF:0010197 comment: One id missing synonym: "epididymis- adult" EXACT [] is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001301 ! epididymis relationship: derives_from UBERON:0001301 ! epididymis [Term] id: FF:0011291 name: mouse diencephalon- adult sample namespace: FANTOM synonym: "diencephalon- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001894 ! diencephalon relationship: derives_from UBERON:0001894 ! diencephalon [Term] id: FF:0011303 name: mouse pituitary gland- adult sample namespace: FANTOM synonym: "pituitary gland- adult" EXACT [] is_a: FF:0011291 ! mouse diencephalon- adult sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000007 ! pituitary gland relationship: derives_from UBERON:0000007 ! pituitary gland [Term] id: FF:0011304 name: mouse thymus- neonate N03 sample namespace: FANTOM synonym: "thymus- neonate N03" EXACT [] is_a: FF:0000311 ! mouse neonate N3 sample intersection_of: FF:0000311 ! mouse neonate N3 sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0011305 name: mouse spinal cord- adult sample namespace: FANTOM synonym: "spinal cord- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002240 ! spinal cord relationship: derives_from UBERON:0002240 ! spinal cord [Term] id: FF:0011306 name: mouse spleen- adult sample namespace: FANTOM synonym: "spleen- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002106 ! spleen relationship: derives_from UBERON:0002106 ! spleen [Term] id: FF:0011307 name: mouse lung- adult sample namespace: FANTOM synonym: "lung, adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0011308 name: mouse skin- adult sample namespace: FANTOM synonym: "skin- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000014 ! zone of skin relationship: derives_from UBERON:0000014 ! zone of skin [Term] id: FF:0011309 name: mouse eyeball- adult sample namespace: FANTOM synonym: "eyeball- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0010230 ! eyeball of camera-type eye relationship: derives_from UBERON:0010230 ! eyeball of camera-type eye [Term] id: FF:0011310 name: mouse tongue- adult sample namespace: FANTOM synonym: "tongue- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001723 ! tongue relationship: derives_from UBERON:0001723 ! tongue [Term] id: FF:0011311 name: mouse whole body- embryo E11 sample namespace: FANTOM synonym: "whole body- embryo E11" EXACT [] is_a: FF:0000294 ! mouse embryonic day 11 sample is_a: FF:0300111 ! mouse whole body sample intersection_of: FF:0000294 ! mouse embryonic day 11 sample intersection_of: FF:0300111 ! mouse whole body sample [Term] id: FF:0011312 name: mouse stomach- adult sample namespace: FANTOM synonym: "stomach- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000945 ! stomach relationship: derives_from UBERON:0000945 ! stomach [Term] id: FF:0011313 name: mouse heart- embryo E11 sample namespace: FANTOM synonym: "heart- embryo E11" EXACT [] is_a: FF:0000294 ! mouse embryonic day 11 sample intersection_of: FF:0000294 ! mouse embryonic day 11 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011314 name: mouse forelimb- embryo E11 sample namespace: FANTOM synonym: "forelimb- embryo E11" EXACT [] is_a: FF:0000294 ! mouse embryonic day 11 sample intersection_of: FF:0000294 ! mouse embryonic day 11 sample intersection_of: derives_from UBERON:0002102 ! forelimb relationship: derives_from UBERON:0002102 ! forelimb [Term] id: FF:0011315 name: mouse pancreas- adult sample namespace: FANTOM synonym: "pancreas- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001264 ! pancreas relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:0011316 name: mouse eyeball- embryo E12 sample namespace: FANTOM synonym: "eyeball- embryo E12" EXACT [] is_a: FF:0000295 ! mouse embryonic day 12 sample intersection_of: FF:0000295 ! mouse embryonic day 12 sample intersection_of: derives_from UBERON:0010230 ! eyeball of camera-type eye relationship: derives_from UBERON:0010230 ! eyeball of camera-type eye [Term] id: FF:0011317 name: mouse pituitary gland- embryo E12 sample namespace: FANTOM synonym: "pituitary gland- embryo E12" EXACT [] is_a: FF:0000295 ! mouse embryonic day 12 sample intersection_of: FF:0000295 ! mouse embryonic day 12 sample intersection_of: derives_from UBERON:0000007 ! pituitary gland relationship: derives_from UBERON:0000007 ! pituitary gland [Term] id: FF:0011318 name: mouse heart- embryo E12 sample namespace: FANTOM synonym: "heart- embryo E12" EXACT [] is_a: FF:0000295 ! mouse embryonic day 12 sample intersection_of: FF:0000295 ! mouse embryonic day 12 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011319 name: mouse lung- embryo E12 sample namespace: FANTOM synonym: "lung- embryo E12" EXACT [] is_a: FF:0000295 ! mouse embryonic day 12 sample intersection_of: FF:0000295 ! mouse embryonic day 12 sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0011320 name: mouse liver- embryo E12 sample namespace: FANTOM synonym: "liver- embryo E12" EXACT [] is_a: FF:0000295 ! mouse embryonic day 12 sample intersection_of: FF:0000295 ! mouse embryonic day 12 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011321 name: mouse stomach- embryo E12 sample namespace: FANTOM synonym: "stomach- embryo E12" EXACT [] is_a: FF:0000295 ! mouse embryonic day 12 sample intersection_of: FF:0000295 ! mouse embryonic day 12 sample intersection_of: derives_from UBERON:0000945 ! stomach relationship: derives_from UBERON:0000945 ! stomach [Term] id: FF:0011322 name: mouse forelimb- embryo E12 sample namespace: FANTOM synonym: "forelimb- embryo E12" EXACT [] is_a: FF:0000295 ! mouse embryonic day 12 sample intersection_of: FF:0000295 ! mouse embryonic day 12 sample intersection_of: derives_from UBERON:0002102 ! forelimb relationship: derives_from UBERON:0002102 ! forelimb [Term] id: FF:0011323 name: mouse colon- adult sample namespace: FANTOM synonym: "colon- adult" EXACT [] is_a: FF:0011285 ! mouse intestine- adult sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001155 ! colon relationship: derives_from UBERON:0001155 ! colon [Term] id: FF:0011324 name: mouse cecum - adult sample namespace: FANTOM synonym: "cecum - adult" EXACT [] is_a: FF:0011323 ! mouse colon- adult sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001153 ! caecum relationship: derives_from UBERON:0001153 ! caecum [Term] id: FF:0011325 name: mouse pituitary gland- embryo E13 sample namespace: FANTOM synonym: "pituitary gland- embryo E13" EXACT [] is_a: FF:0000293 ! mouse embryonic day 13 sample intersection_of: FF:0000293 ! mouse embryonic day 13 sample intersection_of: derives_from UBERON:0000007 ! pituitary gland relationship: derives_from UBERON:0000007 ! pituitary gland [Term] id: FF:0011326 name: mouse whole body- embryo E13 sample namespace: FANTOM synonym: "whole body- embryo E13" EXACT [] is_a: FF:0000293 ! mouse embryonic day 13 sample is_a: FF:0300111 ! mouse whole body sample intersection_of: FF:0000293 ! mouse embryonic day 13 sample intersection_of: FF:0300111 ! mouse whole body sample [Term] id: FF:0011327 name: mouse heart- embryo E13 sample namespace: FANTOM synonym: "heart- embryo E13" EXACT [] is_a: FF:0000293 ! mouse embryonic day 13 sample intersection_of: FF:0000293 ! mouse embryonic day 13 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011328 name: mouse liver- embryo E13 sample namespace: FANTOM synonym: "liver- embryo E13" EXACT [] is_a: FF:0000293 ! mouse embryonic day 13 sample intersection_of: FF:0000293 ! mouse embryonic day 13 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011329 name: mouse thymus- adult sample namespace: FANTOM synonym: "thymus- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0011330 name: mouse intestine- embryo E13 sample namespace: FANTOM synonym: "intestine- embryo E13" EXACT [] is_a: FF:0000293 ! mouse embryonic day 13 sample intersection_of: FF:0000293 ! mouse embryonic day 13 sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0011331 name: mouse forelimb- embryo E13 sample namespace: FANTOM synonym: "forelimb- embryo E13" EXACT [] is_a: FF:0000293 ! mouse embryonic day 13 sample intersection_of: FF:0000293 ! mouse embryonic day 13 sample intersection_of: derives_from UBERON:0002102 ! forelimb relationship: derives_from UBERON:0002102 ! forelimb [Term] id: FF:0011332 name: mouse testis- embryo E13 sample namespace: FANTOM synonym: "testis- embryo E13" EXACT [] is_a: FF:0011282 ! mouse gonad- embryo E13 sample intersection_of: FF:0000293 ! mouse embryonic day 13 sample intersection_of: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000473 ! testis [Term] id: FF:0011333 name: mouse whole body- embryo E14 sample namespace: FANTOM synonym: "whole body- embryo E14" EXACT [] is_a: FF:0000296 ! mouse embryonic day 14 sample is_a: FF:0300111 ! mouse whole body sample intersection_of: FF:0000296 ! mouse embryonic day 14 sample intersection_of: FF:0300111 ! mouse whole body sample [Term] id: FF:0011334 name: mouse pituitary gland- embryo E14 sample namespace: FANTOM synonym: "pituitary gland- embryo E14" EXACT [] is_a: FF:0000296 ! mouse embryonic day 14 sample intersection_of: FF:0000296 ! mouse embryonic day 14 sample intersection_of: derives_from UBERON:0000007 ! pituitary gland relationship: derives_from UBERON:0000007 ! pituitary gland [Term] id: FF:0011335 name: mouse eyeball- embryo E14 sample namespace: FANTOM synonym: "eyeball- embryo E14" EXACT [] is_a: FF:0000296 ! mouse embryonic day 14 sample intersection_of: FF:0000296 ! mouse embryonic day 14 sample intersection_of: derives_from UBERON:0010230 ! eyeball of camera-type eye relationship: derives_from UBERON:0010230 ! eyeball of camera-type eye [Term] id: FF:0011336 name: mouse thymus- embryo E14 sample namespace: FANTOM synonym: "thymus- embryo E14" EXACT [] is_a: FF:0000296 ! mouse embryonic day 14 sample intersection_of: FF:0000296 ! mouse embryonic day 14 sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0011337 name: mouse heart- embryo E14 sample namespace: FANTOM synonym: "heart- embryo E14" EXACT [] is_a: FF:0000296 ! mouse embryonic day 14 sample intersection_of: FF:0000296 ! mouse embryonic day 14 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011338 name: mouse lung- embryo E14 sample namespace: FANTOM synonym: "lung- embryo E14" EXACT [] is_a: FF:0000296 ! mouse embryonic day 14 sample intersection_of: FF:0000296 ! mouse embryonic day 14 sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0011339 name: mouse adrenal gland - embryo E14 sample namespace: FANTOM synonym: "adrenal gland - embryo E14" EXACT [] is_a: FF:0000296 ! mouse embryonic day 14 sample intersection_of: FF:0000296 ! mouse embryonic day 14 sample intersection_of: derives_from UBERON:0002369 ! adrenal gland relationship: derives_from UBERON:0002369 ! adrenal gland [Term] id: FF:0011340 name: mouse liver- embryo E14 sample namespace: FANTOM synonym: "liver- embryo E14" EXACT [] is_a: FF:0000296 ! mouse embryonic day 14 sample intersection_of: FF:0000296 ! mouse embryonic day 14 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011341 name: mouse kidney- embryo E14 sample namespace: FANTOM synonym: "kidney- embryo E14" EXACT [] is_a: FF:0000296 ! mouse embryonic day 14 sample intersection_of: FF:0000296 ! mouse embryonic day 14 sample intersection_of: derives_from UBERON:0002113 ! kidney relationship: derives_from UBERON:0002113 ! kidney [Term] id: FF:0011342 name: mouse forelimb- embryo E14 sample namespace: FANTOM synonym: "forelimb- embryo E14" EXACT [] is_a: FF:0000296 ! mouse embryonic day 14 sample intersection_of: FF:0000296 ! mouse embryonic day 14 sample intersection_of: derives_from UBERON:0002102 ! forelimb relationship: derives_from UBERON:0002102 ! forelimb [Term] id: FF:0011343 name: mouse whole body- embryo E14.5 sample namespace: FANTOM synonym: "whole body- embryo E14.5" EXACT [] is_a: FF:0000297 ! mouse embryonic day 14.5 sample is_a: FF:0300111 ! mouse whole body sample intersection_of: FF:0000297 ! mouse embryonic day 14.5 sample intersection_of: FF:0300111 ! mouse whole body sample [Term] id: FF:0011344 name: mouse eyeball- embryo E15 sample namespace: FANTOM synonym: "eyeball- embryo E15" EXACT [] is_a: FF:0000298 ! mouse embryonic day 15 sample intersection_of: FF:0000298 ! mouse embryonic day 15 sample intersection_of: derives_from UBERON:0010230 ! eyeball of camera-type eye relationship: derives_from UBERON:0010230 ! eyeball of camera-type eye [Term] id: FF:0011345 name: mouse pituitary gland- embryo E15 sample namespace: FANTOM synonym: "pituitary gland- embryo E15" EXACT [] is_a: FF:0000298 ! mouse embryonic day 15 sample intersection_of: FF:0000298 ! mouse embryonic day 15 sample intersection_of: derives_from UBERON:0000007 ! pituitary gland relationship: derives_from UBERON:0000007 ! pituitary gland [Term] id: FF:0011346 name: mouse thymus- embryo E15 sample namespace: FANTOM synonym: "thymus- embryo E15" EXACT [] is_a: FF:0000298 ! mouse embryonic day 15 sample intersection_of: FF:0000298 ! mouse embryonic day 15 sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0011347 name: mouse heart- embryo E15 sample namespace: FANTOM synonym: "heart- embryo E15" EXACT [] is_a: FF:0000298 ! mouse embryonic day 15 sample intersection_of: FF:0000298 ! mouse embryonic day 15 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011348 name: mouse lung- embryo E15 sample namespace: FANTOM synonym: "lung- embryo E15" EXACT [] is_a: FF:0000298 ! mouse embryonic day 15 sample intersection_of: FF:0000298 ! mouse embryonic day 15 sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0011349 name: mouse liver- embryo E15 sample namespace: FANTOM synonym: "liver- embryo E15" EXACT [] is_a: FF:0000298 ! mouse embryonic day 15 sample intersection_of: FF:0000298 ! mouse embryonic day 15 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011350 name: mouse kidney- embryo E15 sample namespace: FANTOM synonym: "kidney- embryo E15" EXACT [] is_a: FF:0000298 ! mouse embryonic day 15 sample intersection_of: FF:0000298 ! mouse embryonic day 15 sample intersection_of: derives_from UBERON:0002113 ! kidney relationship: derives_from UBERON:0002113 ! kidney [Term] id: FF:0011351 name: mouse forelimb- embryo E15 sample namespace: FANTOM synonym: "forelimb- embryo E15" EXACT [] is_a: FF:0000298 ! mouse embryonic day 15 sample intersection_of: FF:0000298 ! mouse embryonic day 15 sample intersection_of: derives_from UBERON:0002102 ! forelimb relationship: derives_from UBERON:0002102 ! forelimb [Term] id: FF:0011352 name: mouse testis- embryo E15 sample namespace: FANTOM synonym: "testis- embryo E15" EXACT [] is_a: FF:0000298 ! mouse embryonic day 15 sample intersection_of: FF:0000298 ! mouse embryonic day 15 sample intersection_of: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000473 ! testis [Term] id: FF:0011353 name: mouse pituitary gland- embryo E16 sample namespace: FANTOM synonym: "pituitary gland- embryo E16" EXACT [] is_a: FF:0000299 ! mouse embryonic day 16 sample intersection_of: FF:0000299 ! mouse embryonic day 16 sample intersection_of: derives_from UBERON:0000007 ! pituitary gland relationship: derives_from UBERON:0000007 ! pituitary gland [Term] id: FF:0011354 name: mouse whole body- embryo E16 sample namespace: FANTOM synonym: "whole body- embryo E16" EXACT [] is_a: FF:0000299 ! mouse embryonic day 16 sample is_a: FF:0300111 ! mouse whole body sample intersection_of: FF:0000299 ! mouse embryonic day 16 sample intersection_of: FF:0300111 ! mouse whole body sample [Term] id: FF:0011355 name: mouse thymus- embryo E16 sample namespace: FANTOM synonym: "thymus- embryo E16" EXACT [] is_a: FF:0000299 ! mouse embryonic day 16 sample intersection_of: FF:0000299 ! mouse embryonic day 16 sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0011356 name: mouse heart- embryo E16 sample namespace: FANTOM synonym: "heart- embryo E16" EXACT [] is_a: FF:0000299 ! mouse embryonic day 16 sample intersection_of: FF:0000299 ! mouse embryonic day 16 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011357 name: mouse lung- embryo E16 sample namespace: FANTOM synonym: "lung- embryo E16" EXACT [] is_a: FF:0000299 ! mouse embryonic day 16 sample intersection_of: FF:0000299 ! mouse embryonic day 16 sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0011358 name: mouse stomach- embryo E16 sample namespace: FANTOM synonym: "stomach- embryo E16" EXACT [] is_a: FF:0000299 ! mouse embryonic day 16 sample intersection_of: FF:0000299 ! mouse embryonic day 16 sample intersection_of: derives_from UBERON:0000945 ! stomach relationship: derives_from UBERON:0000945 ! stomach [Term] id: FF:0011359 name: mouse aorta - adult sample namespace: FANTOM synonym: "mouse aorta - adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000947 ! aorta relationship: derives_from UBERON:0000947 ! aorta [Term] id: FF:0011360 name: mouse spleen- embryo E16 sample namespace: FANTOM synonym: "spleen- embryo E16" EXACT [] is_a: FF:0000299 ! mouse embryonic day 16 sample intersection_of: FF:0000299 ! mouse embryonic day 16 sample intersection_of: derives_from UBERON:0002106 ! spleen relationship: derives_from UBERON:0002106 ! spleen [Term] id: FF:0011361 name: mouse liver- embryo E16 sample namespace: FANTOM synonym: "liver- embryo E16" EXACT [] is_a: FF:0000299 ! mouse embryonic day 16 sample intersection_of: FF:0000299 ! mouse embryonic day 16 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011362 name: mouse intestine- embryo E16 sample namespace: FANTOM synonym: "intestine- embryo E16" EXACT [] is_a: FF:0000299 ! mouse embryonic day 16 sample intersection_of: FF:0000299 ! mouse embryonic day 16 sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0011363 name: mouse kidney- embryo E16 sample namespace: FANTOM synonym: "kidney- embryo E16" EXACT [] is_a: FF:0000299 ! mouse embryonic day 16 sample intersection_of: FF:0000299 ! mouse embryonic day 16 sample intersection_of: derives_from UBERON:0002113 ! kidney relationship: derives_from UBERON:0002113 ! kidney [Term] id: FF:0011364 name: mouse testis- embryo E16 sample namespace: FANTOM synonym: "testis- embryo E16" EXACT [] is_a: FF:0000299 ! mouse embryonic day 16 sample intersection_of: FF:0000299 ! mouse embryonic day 16 sample intersection_of: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000473 ! testis [Term] id: FF:0011365 name: mouse whole body- embryo E17 sample namespace: FANTOM synonym: "whole body- embryo E17" EXACT [] is_a: FF:0000300 ! mouse embryonic day 17 sample is_a: FF:0300111 ! mouse whole body sample intersection_of: FF:0000300 ! mouse embryonic day 17 sample intersection_of: FF:0300111 ! mouse whole body sample [Term] id: FF:0011366 name: mouse thymus- embryo E17 sample namespace: FANTOM synonym: "thymus- embryo E17" EXACT [] is_a: FF:0000300 ! mouse embryonic day 17 sample intersection_of: FF:0000300 ! mouse embryonic day 17 sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0011367 name: mouse heart- embryo E17 sample namespace: FANTOM synonym: "heart- embryo E17" EXACT [] is_a: FF:0000300 ! mouse embryonic day 17 sample intersection_of: FF:0000300 ! mouse embryonic day 17 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011368 name: mouse lung- embryo E17 sample namespace: FANTOM synonym: "lung- embryo E17" EXACT [] is_a: FF:0000300 ! mouse embryonic day 17 sample intersection_of: FF:0000300 ! mouse embryonic day 17 sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0011369 name: mouse liver- embryo E17 sample namespace: FANTOM synonym: "liver- embryo E17" EXACT [] is_a: FF:0000300 ! mouse embryonic day 17 sample intersection_of: FF:0000300 ! mouse embryonic day 17 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011370 name: mouse intestine- embryo E17 sample namespace: FANTOM synonym: "intestine- embryo E17" EXACT [] is_a: FF:0000300 ! mouse embryonic day 17 sample intersection_of: FF:0000300 ! mouse embryonic day 17 sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0011371 name: mouse kidney- embryo E17 sample namespace: FANTOM synonym: "kidney- embryo E17" EXACT [] is_a: FF:0000300 ! mouse embryonic day 17 sample intersection_of: FF:0000300 ! mouse embryonic day 17 sample intersection_of: derives_from UBERON:0002113 ! kidney relationship: derives_from UBERON:0002113 ! kidney [Term] id: FF:0011372 name: mouse testis- embryo E17 sample namespace: FANTOM synonym: "testis- embryo E17" EXACT [] is_a: FF:0000300 ! mouse embryonic day 17 sample intersection_of: FF:0000300 ! mouse embryonic day 17 sample intersection_of: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000473 ! testis [Term] id: FF:0011373 name: mouse adrenal gland - adult sample namespace: FANTOM synonym: "mouse adrenal gland - adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002369 ! adrenal gland relationship: derives_from UBERON:0002369 ! adrenal gland [Term] id: FF:0011374 name: mouse whole body- embryo E17.5 sample namespace: FANTOM synonym: "whole body- embryo E17.5" EXACT [] is_a: FF:0000301 ! mouse embryonic day 17.5 sample is_a: FF:0300111 ! mouse whole body sample intersection_of: FF:0000301 ! mouse embryonic day 17.5 sample intersection_of: FF:0300111 ! mouse whole body sample [Term] id: FF:0011375 name: mouse whole body- embryo E18 sample namespace: FANTOM synonym: "whole body- embryo E18" EXACT [] is_a: FF:0000302 ! mouse embryonic day 18 sample is_a: FF:0300111 ! mouse whole body sample intersection_of: FF:0000302 ! mouse embryonic day 18 sample intersection_of: FF:0300111 ! mouse whole body sample [Term] id: FF:0011376 name: mouse liver- embryo E18 sample namespace: FANTOM synonym: "liver- embryo E18" EXACT [] is_a: FF:0000302 ! mouse embryonic day 18 sample intersection_of: FF:0000302 ! mouse embryonic day 18 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011377 name: mouse testis- embryo E18 sample namespace: FANTOM synonym: "testis- embryo E18" EXACT [] is_a: FF:0000302 ! mouse embryonic day 18 sample intersection_of: FF:0000302 ! mouse embryonic day 18 sample intersection_of: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000473 ! testis [Term] id: FF:0011378 name: mouse ovary- embryo E18 sample namespace: FANTOM synonym: "ovary- embryo E18" EXACT [] is_a: FF:0000302 ! mouse embryonic day 18 sample intersection_of: FF:0000302 ! mouse embryonic day 18 sample intersection_of: derives_from UBERON:0000992 ! female gonad relationship: derives_from UBERON:0000992 ! female gonad [Term] id: FF:0011379 name: mouse liver- adult pregnant day01 sample namespace: FANTOM synonym: "liver- adult pregnant day01" EXACT [] is_a: FF:0000318 ! mouse pregnant day 1 sample intersection_of: FF:0000318 ! mouse pregnant day 1 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011380 name: mouse vesicular gland- adult sample namespace: FANTOM synonym: "vesicular gland- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0007194 ! vesicular gland relationship: derives_from UBERON:0007194 ! vesicular gland [Term] id: FF:0011381 name: mouse placenta- adult pregnant day10 sample namespace: FANTOM synonym: "placenta- adult pregnant day10" EXACT [] is_a: FF:0000320 ! mouse pregnant day 10 sample intersection_of: FF:0000320 ! mouse pregnant day 10 sample intersection_of: derives_from UBERON:0001987 ! placenta relationship: derives_from UBERON:0001987 ! placenta [Term] id: FF:0011383 name: mouse testis- adult sample namespace: FANTOM synonym: "testis- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000473 ! testis [Term] id: FF:0011384 name: mouse placenta- adult pregnant day17 sample namespace: FANTOM synonym: "placenta- adult pregnant day17" EXACT [] is_a: FF:0000321 ! mouse pregnant day 17 sample intersection_of: FF:0000321 ! mouse pregnant day 17 sample intersection_of: derives_from UBERON:0001987 ! placenta relationship: derives_from UBERON:0001987 ! placenta [Term] id: FF:0011386 name: mouse amnion - adult pregnant day17.5 sample namespace: FANTOM synonym: "amnion - adult pregnant day17.5" EXACT [] is_a: FF:0000322 ! mouse pregnant day 17.5 sample intersection_of: FF:0000322 ! mouse pregnant day 17.5 sample intersection_of: derives_from UBERON:0000305 ! amnion relationship: derives_from UBERON:0000305 ! amnion [Term] id: FF:0011387 name: mouse mammary gland- adult pregnant day19 sample namespace: FANTOM synonym: "mammary gland- adult pregnant day19" EXACT [] is_a: FF:0300108 ! mouse pregnant day 19 sample intersection_of: FF:0300108 ! mouse pregnant day 19 sample intersection_of: derives_from UBERON:0001911 ! mammary gland relationship: derives_from UBERON:0001911 ! mammary gland [Term] id: FF:0011388 name: mouse submandibular gland- adult sample namespace: FANTOM synonym: "submandibular gland- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001736 ! submandibular gland relationship: derives_from UBERON:0001736 ! submandibular gland [Term] id: FF:0011389 name: mouse uterus- adult pregnant day19 sample namespace: FANTOM synonym: "uterus- adult pregnant day19" EXACT [] is_a: FF:0011440 ! mouse uterus- adult sample is_a: FF:0300108 ! mouse pregnant day 19 sample intersection_of: FF:0300108 ! mouse pregnant day 19 sample intersection_of: derives_from UBERON:0000995 ! uterus relationship: derives_from UBERON:0000995 ! uterus [Term] id: FF:0011390 name: mouse mammary gland- adult lactating day02 sample namespace: FANTOM synonym: "mammary gland- adult lactating day02" EXACT [] is_a: FF:0000324 ! mouse lactating sample relationship: derives_from UBERON:0001911 ! mammary gland [Term] id: FF:0011391 name: mouse hippocampus- neonate N00 sample namespace: FANTOM synonym: "hippocampus- neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0001954 ! Ammon's horn relationship: derives_from UBERON:0001954 ! Ammon's horn [Term] id: FF:0011392 name: mouse corpus striatum- neonate N00 sample namespace: FANTOM synonym: "corpus striatum- neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0000369 ! corpus striatum relationship: derives_from UBERON:0000369 ! corpus striatum [Term] id: FF:0011393 name: mouse heart- neonate N00 sample namespace: FANTOM synonym: "heart- neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011394 name: mouse lung- neonate N00 sample namespace: FANTOM synonym: "lung- neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0011395 name: mouse liver- neonate N00 sample namespace: FANTOM synonym: "liver- neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011396 name: mouse kidney- neonate N00 sample namespace: FANTOM synonym: "kidney- neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0002113 ! kidney relationship: derives_from UBERON:0002113 ! kidney [Term] id: FF:0011397 name: mouse skin- neonate N00 sample namespace: FANTOM synonym: "skin- neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0000014 ! zone of skin relationship: derives_from UBERON:0000014 ! zone of skin [Term] id: FF:0011398 name: mouse whole body- neonate N00 sample namespace: FANTOM synonym: "whole body- neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample is_a: FF:0300111 ! mouse whole body sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0300111 ! mouse whole body sample [Term] id: FF:0011399 name: mouse whole body- neonate N01 sample namespace: FANTOM synonym: "whole body- neonate N01" EXACT [] is_a: FF:0000734 ! mouse neonate N1 sample is_a: FF:0300111 ! mouse whole body sample intersection_of: FF:0000734 ! mouse neonate N1 sample intersection_of: FF:0300111 ! mouse whole body sample [Term] id: FF:0011400 name: mouse skin- neonate N03 sample namespace: FANTOM synonym: "skin- neonate N03" EXACT [] is_a: FF:0000311 ! mouse neonate N3 sample intersection_of: FF:0000311 ! mouse neonate N3 sample intersection_of: derives_from UBERON:0000014 ! zone of skin relationship: derives_from UBERON:0000014 ! zone of skin [Term] id: FF:0011401 name: mouse thymus- neonate N06 sample namespace: FANTOM synonym: "thymus- neonate N06" EXACT [] is_a: FF:0000312 ! mouse neonate N6 sample intersection_of: FF:0000312 ! mouse neonate N6 sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0011402 name: mouse lung- neonate N06 sample namespace: FANTOM synonym: "lung- neonate N06" EXACT [] is_a: FF:0000312 ! mouse neonate N6 sample intersection_of: FF:0000312 ! mouse neonate N6 sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0011403 name: mouse liver- neonate N06 sample namespace: FANTOM synonym: "liver- neonate N06" EXACT [] is_a: FF:0000312 ! mouse neonate N6 sample intersection_of: FF:0000312 ! mouse neonate N6 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011404 name: mouse intestine- neonate N06 sample namespace: FANTOM synonym: "intestine- neonate N06" EXACT [] is_a: FF:0000312 ! mouse neonate N6 sample intersection_of: FF:0000312 ! mouse neonate N6 sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0011405 name: mouse whole body- neonate N06 sample namespace: FANTOM comment: todo - whole body synonym: "whole body- neonate N06" EXACT [] is_a: FF:0000312 ! mouse neonate N6 sample is_a: FF:0300111 ! mouse whole body sample intersection_of: FF:0000312 ! mouse neonate N6 sample intersection_of: FF:0300111 ! mouse whole body sample [Term] id: FF:0011406 name: mouse skin- neonate N06 sample namespace: FANTOM synonym: "skin- neonate N06" EXACT [] is_a: FF:0000312 ! mouse neonate N6 sample intersection_of: FF:0000312 ! mouse neonate N6 sample intersection_of: derives_from UBERON:0000014 ! zone of skin relationship: derives_from UBERON:0000014 ! zone of skin [Term] id: FF:0011407 name: mouse thymus- neonate N07 sample namespace: FANTOM synonym: "thymus- neonate N07" EXACT [] is_a: FF:0000313 ! mouse neonate N7 sample intersection_of: FF:0000313 ! mouse neonate N7 sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0011408 name: mouse lung- neonate N07 sample namespace: FANTOM synonym: "lung- neonate N07" EXACT [] is_a: FF:0000313 ! mouse neonate N7 sample intersection_of: FF:0000313 ! mouse neonate N7 sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0011409 name: mouse liver- neonate N07 sample namespace: FANTOM synonym: "liver- neonate N07" EXACT [] is_a: FF:0000313 ! mouse neonate N7 sample intersection_of: FF:0000313 ! mouse neonate N7 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011410 name: mouse stomach- neonate N07 sample namespace: FANTOM synonym: "stomach- neonate N07" EXACT [] is_a: FF:0000313 ! mouse neonate N7 sample intersection_of: FF:0000313 ! mouse neonate N7 sample intersection_of: derives_from UBERON:0000945 ! stomach relationship: derives_from UBERON:0000945 ! stomach [Term] id: FF:0011411 name: mouse intestine- neonate N07 sample namespace: FANTOM synonym: "intestine- neonate N07" EXACT [] is_a: FF:0000313 ! mouse neonate N7 sample intersection_of: FF:0000313 ! mouse neonate N7 sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0011412 name: mouse testis- neonate N07 sample namespace: FANTOM synonym: "testis- neonate N07" EXACT [] is_a: FF:0000313 ! mouse neonate N7 sample intersection_of: FF:0000313 ! mouse neonate N7 sample intersection_of: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000473 ! testis [Term] id: FF:0011413 name: mouse thymus- neonate N10 sample namespace: FANTOM synonym: "thymus- neonate N10" EXACT [] is_a: FF:0000305 ! mouse neonate N10 sample intersection_of: FF:0000305 ! mouse neonate N10 sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0011414 name: mouse heart- neonate N10 sample namespace: FANTOM synonym: "heart- neonate N10" EXACT [] is_a: FF:0000305 ! mouse neonate N10 sample intersection_of: FF:0000305 ! mouse neonate N10 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011415 name: mouse lung- neonate N10 sample namespace: FANTOM synonym: "lung- neonate N10" EXACT [] is_a: FF:0000305 ! mouse neonate N10 sample intersection_of: FF:0000305 ! mouse neonate N10 sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0011416 name: mouse liver- neonate N10 sample namespace: FANTOM synonym: "liver- neonate N10" EXACT [] is_a: FF:0000305 ! mouse neonate N10 sample intersection_of: FF:0000305 ! mouse neonate N10 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011417 name: mouse spleen- neonate N10 sample namespace: FANTOM synonym: "spleen- neonate N10" EXACT [] is_a: FF:0000305 ! mouse neonate N10 sample intersection_of: FF:0000305 ! mouse neonate N10 sample intersection_of: derives_from UBERON:0002106 ! spleen relationship: derives_from UBERON:0002106 ! spleen [Term] id: FF:0011418 name: mouse intestine- neonate N10 sample namespace: FANTOM synonym: "intestine- neonate N10" EXACT [] is_a: FF:0000305 ! mouse neonate N10 sample intersection_of: FF:0000305 ! mouse neonate N10 sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0011419 name: mouse kidney- neonate N10 sample namespace: FANTOM synonym: "kidney- neonate N10" EXACT [] is_a: FF:0000305 ! mouse neonate N10 sample intersection_of: FF:0000305 ! mouse neonate N10 sample intersection_of: derives_from UBERON:0002113 ! kidney relationship: derives_from UBERON:0002113 ! kidney [Term] id: FF:0011420 name: mouse whole body- neonate N10 sample namespace: FANTOM synonym: "whole body- neonate N10" EXACT [] is_a: FF:0000305 ! mouse neonate N10 sample is_a: FF:0300111 ! mouse whole body sample intersection_of: FF:0000305 ! mouse neonate N10 sample intersection_of: FF:0300111 ! mouse whole body sample [Term] id: FF:0011421 name: mouse skin- neonate N10 sample namespace: FANTOM synonym: "skin- neonate N10" EXACT [] is_a: FF:0000305 ! mouse neonate N10 sample intersection_of: FF:0000305 ! mouse neonate N10 sample intersection_of: derives_from UBERON:0000014 ! zone of skin relationship: derives_from UBERON:0000014 ! zone of skin [Term] id: FF:0011422 name: mouse testis- neonate N10 sample namespace: FANTOM synonym: "testis- neonate N10" EXACT [] is_a: FF:0000305 ! mouse neonate N10 sample intersection_of: FF:0000305 ! mouse neonate N10 sample intersection_of: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000473 ! testis [Term] id: FF:0011423 name: mouse eyeball- neonate N16 sample namespace: FANTOM synonym: "eyeball- neonate N16" EXACT [] is_a: FF:0000306 ! mouse neonate N16 sample intersection_of: FF:0000306 ! mouse neonate N16 sample intersection_of: derives_from UBERON:0010230 ! eyeball of camera-type eye relationship: derives_from UBERON:0010230 ! eyeball of camera-type eye [Term] id: FF:0011424 name: mouse heart- neonate N16 sample namespace: FANTOM synonym: "heart- neonate N16" EXACT [] is_a: FF:0000306 ! mouse neonate N16 sample intersection_of: FF:0000306 ! mouse neonate N16 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011425 name: mouse small intestine- neonate N16 sample namespace: FANTOM synonym: "small intestine- neonate N16" EXACT [] is_a: FF:0000306 ! mouse neonate N16 sample intersection_of: FF:0000306 ! mouse neonate N16 sample intersection_of: derives_from UBERON:0002108 ! small intestine relationship: derives_from UBERON:0002108 ! small intestine [Term] id: FF:0011426 name: mouse thymus- neonate N20 sample namespace: FANTOM synonym: "thymus- neonate N20" EXACT [] is_a: FF:0000308 ! mouse neonate N20 sample intersection_of: FF:0000308 ! mouse neonate N20 sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0011427 name: mouse heart- neonate N20 sample namespace: FANTOM synonym: "heart- neonate N20" EXACT [] is_a: FF:0000308 ! mouse neonate N20 sample intersection_of: FF:0000308 ! mouse neonate N20 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011428 name: mouse lung- neonate N20 sample namespace: FANTOM synonym: "lung- neonate N20" EXACT [] is_a: FF:0000308 ! mouse neonate N20 sample intersection_of: FF:0000308 ! mouse neonate N20 sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0011429 name: mouse liver- neonate N20 sample namespace: FANTOM synonym: "liver- neonate N20" EXACT [] is_a: FF:0000308 ! mouse neonate N20 sample intersection_of: FF:0000308 ! mouse neonate N20 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011430 name: mouse spleen- neonate N20 sample namespace: FANTOM synonym: "spleen- neonate N20" EXACT [] is_a: FF:0000308 ! mouse neonate N20 sample intersection_of: FF:0000308 ! mouse neonate N20 sample intersection_of: derives_from UBERON:0002106 ! spleen relationship: derives_from UBERON:0002106 ! spleen [Term] id: FF:0011431 name: mouse intestine- neonate N20 sample namespace: FANTOM synonym: "intestine- neonate N20" EXACT [] is_a: FF:0000308 ! mouse neonate N20 sample intersection_of: FF:0000308 ! mouse neonate N20 sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0011432 name: mouse kidney- neonate N20 sample namespace: FANTOM synonym: "kidney- neonate N20" EXACT [] is_a: FF:0000308 ! mouse neonate N20 sample intersection_of: FF:0000308 ! mouse neonate N20 sample intersection_of: derives_from UBERON:0002113 ! kidney relationship: derives_from UBERON:0002113 ! kidney [Term] id: FF:0011433 name: mouse testis- neonate N20 sample namespace: FANTOM synonym: "testis- neonate N20" EXACT [] is_a: FF:0000308 ! mouse neonate N20 sample intersection_of: FF:0000308 ! mouse neonate N20 sample intersection_of: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000473 ! testis [Term] id: FF:0011434 name: mouse whole body- embryo E12 sample namespace: FANTOM synonym: "whole body- embryo E12" EXACT [] is_a: FF:0000295 ! mouse embryonic day 12 sample is_a: FF:0300111 ! mouse whole body sample intersection_of: FF:0000295 ! mouse embryonic day 12 sample intersection_of: FF:0300111 ! mouse whole body sample [Term] id: FF:0011435 name: mouse prostate- adult sample namespace: FANTOM synonym: "prostate- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002367 ! prostate gland relationship: derives_from UBERON:0002367 ! prostate gland [Term] id: FF:0011436 name: mouse intestinal mucosa- adult sample namespace: FANTOM synonym: "intestinal mucosa- adult" EXACT [] is_a: FF:0011285 ! mouse intestine- adult sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001242 ! intestinal mucosa relationship: derives_from UBERON:0001242 ! intestinal mucosa [Term] id: FF:0011437 name: mouse urinary bladder- adult sample namespace: FANTOM synonym: "urinary bladder- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001255 ! urinary bladder relationship: derives_from UBERON:0001255 ! urinary bladder [Term] id: FF:0011438 name: mouse vagina- adult sample namespace: FANTOM synonym: "mouse vagina- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000996 ! vagina relationship: derives_from UBERON:0000996 ! vagina [Term] id: FF:0011439 name: mouse ovary- adult sample namespace: FANTOM synonym: "ovary- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000992 ! female gonad relationship: derives_from UBERON:0000992 ! female gonad [Term] id: FF:0011440 name: mouse uterus- adult sample namespace: FANTOM synonym: "uterus- adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000995 ! uterus relationship: derives_from UBERON:0000995 ! uterus [Term] id: FF:0011441 name: mouse intestine- embryo E15 sample namespace: FANTOM synonym: "intestine- embryo E15" EXACT [] is_a: FF:0000298 ! mouse embryonic day 15 sample intersection_of: FF:0000298 ! mouse embryonic day 15 sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0011442 name: mouse oviduct- adult pregnant day01 sample namespace: FANTOM synonym: "oviduct- adult pregnant day01" EXACT [] is_a: FF:0000318 ! mouse pregnant day 1 sample intersection_of: FF:0000318 ! mouse pregnant day 1 sample intersection_of: derives_from UBERON:0000993 ! oviduct relationship: derives_from UBERON:0000993 ! oviduct [Term] id: FF:0011443 name: CD14-positive monocytes - treated with IFN + N-hexane sample namespace: FANTOM synonym: "CD14-positive monocytes - treated with IFN + N-hexane" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000629 ! IFN and N-hexane treatment sample is_a: FF:0011111 ! human CD14-positive CD16-negative Monocytes sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000629 ! IFN and N-hexane treatment sample intersection_of: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte relationship: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte [Term] id: FF:0011444 name: CD14-positive monocytes - treated with Trehalose dimycolate (TDM) sample namespace: FANTOM synonym: "CD14-positive monocytes - treated with Trehalose dimycolate (TDM)" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000631 ! trehalose dimycolate (TDM) treatment sample is_a: FF:0011111 ! human CD14-positive CD16-negative Monocytes sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000631 ! trehalose dimycolate (TDM) treatment sample intersection_of: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte relationship: derives_from CL:0002057 ! CD14-positive, CD16-negative classical monocyte [Term] id: FF:0011446 name: CD4-positiveCD25-CD44- naive conventional T cells stimulated with alphaCD3_CD28 - 06hr- (C57BL_6J) sample namespace: FANTOM synonym: "CD4-positiveCD25-CD44- naive conventional T cells stimulated with alphaCD3_CD28 - 06hr- (C57BL_6J)" EXACT [] is_a: EFO:0000606 ! C57BL/6J is_a: FF:0000031 ! CD4-positive T cell sample is_a: FF:0000103 ! mouse sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000363 ! 6 hr sample is_a: FF:0000409 ! T cell expansion sample intersection_of: EFO:0000606 ! C57BL/6J intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000363 ! 6 hr sample intersection_of: FF:0000409 ! T cell expansion sample intersection_of: derives_from CL:0000895 ! naive thymus-derived CD4-positive, alpha-beta T cell relationship: derives_from CL:0000895 ! naive thymus-derived CD4-positive, alpha-beta T cell [Term] id: FF:0011447 name: CD4-positiveCD25-CD44- naive conventional T cells stimulated with alphaCD3_CD28- 06hr- (Balb_cAJcl) sample namespace: FANTOM synonym: "CD4-positiveCD25-CD44- naive conventional T cells stimulated with alphaCD3_CD28- 06hr- (Balb_cAJcl)" EXACT [] is_a: EFO:0000602 ! BALB/c is_a: FF:0000031 ! CD4-positive T cell sample is_a: FF:0000103 ! mouse sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000363 ! 6 hr sample is_a: FF:0000409 ! T cell expansion sample intersection_of: EFO:0000602 ! BALB/c intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000363 ! 6 hr sample intersection_of: FF:0000409 ! T cell expansion sample intersection_of: derives_from CL:0000895 ! naive thymus-derived CD4-positive, alpha-beta T cell relationship: derives_from CL:0000895 ! naive thymus-derived CD4-positive, alpha-beta T cell [Term] id: FF:0011448 name: CD4-positiveCD25-CD44- naive conventional T cells stimulated with PMA an ionomycin- 02hr- (C57BL_6J) sample namespace: FANTOM synonym: "CD4-positiveCD25-CD44- naive conventional T cells stimulated with PMA an ionomycin- 02hr- (C57BL_6J)" EXACT [] is_a: EFO:0000606 ! C57BL/6J is_a: FF:0000031 ! CD4-positive T cell sample is_a: FF:0000103 ! mouse sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000359 ! 2 hr sample is_a: FF:0000409 ! T cell expansion sample intersection_of: EFO:0000606 ! C57BL/6J intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000359 ! 2 hr sample intersection_of: FF:0000409 ! T cell expansion sample intersection_of: derives_from CL:0000895 ! naive thymus-derived CD4-positive, alpha-beta T cell relationship: derives_from CL:0000895 ! naive thymus-derived CD4-positive, alpha-beta T cell [Term] id: FF:0011449 name: CD4-positiveCD25-CD44- naive conventional T cells stimulated with PMA an ionomycin- 02hr- (Balb_cAJcl) sample namespace: FANTOM synonym: "CD4-positiveCD25-CD44- naive conventional T cells stimulated with PMA an ionomycin- 02hr- (Balb_cAJcl)" EXACT [] is_a: EFO:0000602 ! BALB/c is_a: FF:0000031 ! CD4-positive T cell sample is_a: FF:0000103 ! mouse sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0000359 ! 2 hr sample is_a: FF:0000409 ! T cell expansion sample intersection_of: EFO:0000602 ! BALB/c intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000359 ! 2 hr sample intersection_of: FF:0000409 ! T cell expansion sample intersection_of: derives_from CL:0000895 ! naive thymus-derived CD4-positive, alpha-beta T cell relationship: derives_from CL:0000895 ! naive thymus-derived CD4-positive, alpha-beta T cell [Term] id: FF:0011450 name: CD4-positiveCD25-CD44- naive conventional T cells- (C57BL_6J) sample namespace: FANTOM synonym: "CD4-positiveCD25-CD44- naive conventional T cells- (C57BL_6J)" EXACT [] is_a: EFO:0000606 ! C57BL/6J is_a: FF:0000031 ! CD4-positive T cell sample is_a: FF:0000103 ! mouse sample is_a: FF:0000343 ! control treatment sample intersection_of: EFO:0000606 ! C57BL/6J intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000343 ! control treatment sample intersection_of: derives_from CL:0000895 ! naive thymus-derived CD4-positive, alpha-beta T cell relationship: derives_from CL:0000895 ! naive thymus-derived CD4-positive, alpha-beta T cell [Term] id: FF:0011451 name: CD4-positiveCD25-CD44- naive conventional T cells- (Balb_cAJcl) sample namespace: FANTOM synonym: "CD4-positiveCD25-CD44- naive conventional T cells- (Balb_cAJcl)" EXACT [] is_a: EFO:0000602 ! BALB/c is_a: FF:0000031 ! CD4-positive T cell sample is_a: FF:0000103 ! mouse sample is_a: FF:0000343 ! control treatment sample intersection_of: EFO:0000602 ! BALB/c intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000343 ! control treatment sample intersection_of: derives_from CL:0000895 ! naive thymus-derived CD4-positive, alpha-beta T cell relationship: derives_from CL:0000895 ! naive thymus-derived CD4-positive, alpha-beta T cell [Term] id: FF:0011455 name: CD4-positiveCD25-positive regulatory T cells (Balb_cAJcl) sample namespace: FANTOM synonym: "CD4-positiveCD25-positive regulatory T cells (Balb_cAJcl)" EXACT [] is_a: EFO:0000602 ! BALB/c is_a: FF:0000031 ! CD4-positive T cell sample is_a: FF:0000103 ! mouse sample is_a: FF:0000343 ! control treatment sample intersection_of: EFO:0000602 ! BALB/c intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000343 ! control treatment sample intersection_of: derives_from CL:0000792 ! CD4-positive, CD25-positive, alpha-beta regulatory T cell relationship: derives_from CL:0000792 ! CD4-positive, CD25-positive, alpha-beta regulatory T cell [Term] id: FF:0011458 name: tongue epidermis (fungiform papillae) sample namespace: FANTOM synonym: "tongue epidermis (fungiform papillae)" EXACT [] is_a: FF:0010203 ! human tongue - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002448 ! fungiform papilla relationship: derives_from UBERON:0002448 ! fungiform papilla [Term] id: FF:0011460 name: Fingernail (including nail plate- eponychium and hyponychium) sample namespace: FANTOM synonym: "Fingernail (including nail plate- eponychium and hyponychium)" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001705 ! nail intersection_of: derives_from UBERON:0002284 ! hyponychium intersection_of: derives_from UBERON:0004882 ! eponychium intersection_of: derives_from UBERON:0008198 ! nail plate relationship: derives_from UBERON:0001705 ! nail relationship: derives_from UBERON:0002284 ! hyponychium relationship: derives_from UBERON:0004882 ! eponychium relationship: derives_from UBERON:0008198 ! nail plate [Term] id: FF:0011461 name: Mouse hepatic Stellate Cells (lipocyte) sample namespace: FANTOM synonym: "Mouse hepatic Stellate Cells (lipocyte)" EXACT [] is_a: FF:0000077 ! hepatic stellate cell sample is_a: FF:0000107 ! mouse embryonic fibroblast sample intersection_of: FF:0000077 ! hepatic stellate cell sample intersection_of: FF:0000103 ! mouse sample [Term] id: FF:0011462 name: mouse bone- os femoris - neonate N16 sample namespace: FANTOM synonym: "bone- os femoris - neonate N16" EXACT [] is_a: FF:0000306 ! mouse neonate N16 sample intersection_of: FF:0000306 ! mouse neonate N16 sample intersection_of: derives_from UBERON:0000981 ! femur relationship: derives_from UBERON:0000981 ! femur [Term] id: FF:0011463 name: mouse bone- os femoris - neonate N2 sample namespace: FANTOM synonym: "bone- os femoris - neonate N2" EXACT [] is_a: FF:0000307 ! mouse neonate N2 sample intersection_of: FF:0000307 ! mouse neonate N2 sample intersection_of: derives_from UBERON:0000981 ! femur relationship: derives_from UBERON:0000981 ! femur [Term] id: FF:0011464 name: mouse bone- os femoris - adult sample namespace: FANTOM synonym: "bone- os femoris - adult" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000981 ! femur relationship: derives_from UBERON:0000981 ! femur [Term] id: FF:0011465 name: mouse medulla oblongata- neonate N30 sample namespace: FANTOM synonym: "medulla oblongata- neonate N30" EXACT [] is_a: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0001896 ! medulla oblongata relationship: derives_from UBERON:0001896 ! medulla oblongata [Term] id: FF:0011466 name: mouse adrenal gland - neonate N25 sample namespace: FANTOM synonym: "adrenal gland - neonate N25" EXACT [] is_a: FF:0000309 ! mouse neonate N25 sample intersection_of: FF:0000309 ! mouse neonate N25 sample intersection_of: derives_from UBERON:0002369 ! adrenal gland relationship: derives_from UBERON:0002369 ! adrenal gland [Term] id: FF:0011467 name: mouse bone- os femoris - neonate N20 sample namespace: FANTOM synonym: "bone- os femoris - neonate N20" EXACT [] is_a: FF:0000308 ! mouse neonate N20 sample intersection_of: FF:0000308 ! mouse neonate N20 sample intersection_of: derives_from UBERON:0000981 ! femur relationship: derives_from UBERON:0000981 ! femur [Term] id: FF:0011468 name: mouse CD41-positive megakaryocyte control sample namespace: FANTOM synonym: "CD41-positive megakaryocyte control" EXACT [] is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample is_a: FF:0000343 ! control treatment sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000343 ! control treatment sample intersection_of: derives_from CL:0000556 ! megakaryocyte relationship: derives_from CL:0000556 ! megakaryocyte [Term] id: FF:0011469 name: mouse cortex- neonate N30 sample namespace: FANTOM synonym: "cortex- neonate N30" EXACT [] is_a: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0000956 ! cerebral cortex relationship: derives_from UBERON:0000956 ! cerebral cortex [Term] id: FF:0011470 name: mouse diencephalon- neonate N30 sample namespace: FANTOM synonym: "diencephalon- neonate N30" EXACT [] is_a: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0001894 ! diencephalon relationship: derives_from UBERON:0001894 ! diencephalon [Term] id: FF:0011471 name: mouse epididymis and seminiferous tubule- neonate N30 sample namespace: FANTOM synonym: "epididymis and seminiferous tubule- neonate N30" EXACT [] is_a: FF:0011495 ! mouse testis- neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0001301 ! epididymis intersection_of: derives_from UBERON:0001343 ! seminiferous tubule of testis relationship: derives_from UBERON:0001301 ! epididymis relationship: derives_from UBERON:0001343 ! seminiferous tubule of testis [Term] id: FF:0011472 name: human epitheloid carcinoma cell line: HelaS3 ENCODE sample namespace: FANTOM comment: Note - NOT a subclass of CL:0002150 epitheloid macrophage synonym: "epitheloid carcinoma cell line: HelaS3 ENCODE" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample [Term] id: FF:0011473 name: mouse Follicle Associated Epithelium sample namespace: FANTOM synonym: "Follicle Associated Epithelium" EXACT [] is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0001962 ! gut-associated lymphoid tissue relationship: derives_from UBERON:0001962 ! gut-associated lymphoid tissue [Term] id: FF:0011474 name: mouse heart- neonate N03 sample namespace: FANTOM synonym: "heart- neonate N03" EXACT [] is_a: FF:0000311 ! mouse neonate N3 sample intersection_of: FF:0000311 ! mouse neonate N3 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011475 name: mouse heart- neonate N25 sample namespace: FANTOM synonym: "heart- neonate N25" EXACT [] is_a: FF:0000309 ! mouse neonate N25 sample intersection_of: FF:0000309 ! mouse neonate N25 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011476 name: mouse heart- neonate N30 sample namespace: FANTOM synonym: "heart- neonate N30" EXACT [] is_a: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011478 name: mouse Ileum epithelium 3days after RANKL sample namespace: FANTOM synonym: "Ileum epithelium 3days after RANKL" EXACT [] is_a: FF:0000383 ! 3 days sample is_a: FF:0000627 ! RANK ligand treatment sample is_a: FF:0011274 ! mouse Ileum epithelium sample intersection_of: FF:0000103 ! mouse sample intersection_of: FF:0000383 ! 3 days sample intersection_of: FF:0000627 ! RANK ligand treatment sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0008345 ! ileal epithelium relationship: derives_from UBERON:0008345 ! ileal epithelium [Term] id: FF:0011480 name: mouse intestine- neonate N25 sample namespace: FANTOM synonym: "intestine- neonate N25" EXACT [] is_a: FF:0000309 ! mouse neonate N25 sample intersection_of: FF:0000309 ! mouse neonate N25 sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0011481 name: mouse intestine- neonate N30 sample namespace: FANTOM synonym: "intestine- neonate N30" EXACT [] is_a: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0011482 name: mouse kidney- neonate N25 sample namespace: FANTOM synonym: "kidney- neonate N25" EXACT [] is_a: FF:0000309 ! mouse neonate N25 sample intersection_of: FF:0000309 ! mouse neonate N25 sample intersection_of: derives_from UBERON:0002113 ! kidney relationship: derives_from UBERON:0002113 ! kidney [Term] id: FF:0011483 name: mouse kidney- neonate N30 sample namespace: FANTOM synonym: "kidney- neonate N30" EXACT [] is_a: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0002113 ! kidney relationship: derives_from UBERON:0002113 ! kidney [Term] id: FF:0011484 name: mouse liver- neonate N03 sample namespace: FANTOM synonym: "liver- neonate N03" EXACT [] is_a: FF:0000311 ! mouse neonate N3 sample intersection_of: FF:0000311 ! mouse neonate N3 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011485 name: mouse liver- neonate N25 sample namespace: FANTOM synonym: "liver- neonate N25" EXACT [] is_a: FF:0000309 ! mouse neonate N25 sample intersection_of: FF:0000309 ! mouse neonate N25 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011486 name: mouse liver- neonate N30 sample namespace: FANTOM synonym: "liver- neonate N30" EXACT [] is_a: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0011487 name: human locus coeruleus- adult sample namespace: FANTOM synonym: "locus coeruleus- adult" EXACT [] is_a: FF:0010033 ! human pons - adult sample intersection_of: FF:0000210 ! human sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0002148 ! locus ceruleus relationship: derives_from UBERON:0002148 ! locus ceruleus [Term] id: FF:0011488 name: mouse lung- neonate N25 sample namespace: FANTOM synonym: "lung- neonate N25" EXACT [] is_a: FF:0000309 ! mouse neonate N25 sample intersection_of: FF:0000309 ! mouse neonate N25 sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0011489 name: mouse lung- neonate N30 sample namespace: FANTOM synonym: "lung- neonate N30" EXACT [] is_a: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0011490 name: mouse muscle - biceps femoris- neonate N30 sample namespace: FANTOM synonym: "muscle - biceps femoris- neonate N30" EXACT [] is_a: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0001374 ! biceps femoris relationship: derives_from UBERON:0001374 ! biceps femoris [Term] id: FF:0011491 name: mouse spleen- neonate N25 sample namespace: FANTOM synonym: "spleen- neonate N25" EXACT [] is_a: FF:0000309 ! mouse neonate N25 sample intersection_of: FF:0000309 ! mouse neonate N25 sample intersection_of: derives_from UBERON:0002106 ! spleen relationship: derives_from UBERON:0002106 ! spleen [Term] id: FF:0011492 name: mouse stomach- embryo E17 sample namespace: FANTOM synonym: "stomach- embryo E17" EXACT [] is_a: FF:0000300 ! mouse embryonic day 17 sample intersection_of: FF:0000300 ! mouse embryonic day 17 sample intersection_of: derives_from UBERON:0000945 ! stomach relationship: derives_from UBERON:0000945 ! stomach [Term] id: FF:0011493 name: mouse stomach- neonate N25 sample namespace: FANTOM synonym: "stomach- neonate N25" EXACT [] is_a: FF:0000309 ! mouse neonate N25 sample intersection_of: FF:0000309 ! mouse neonate N25 sample intersection_of: derives_from UBERON:0000945 ! stomach relationship: derives_from UBERON:0000945 ! stomach [Term] id: FF:0011494 name: mouse stomach- neonate N30 sample namespace: FANTOM synonym: "stomach- neonate N30" EXACT [] is_a: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0000945 ! stomach relationship: derives_from UBERON:0000945 ! stomach [Term] id: FF:0011495 name: mouse testis- neonate N30 sample namespace: FANTOM synonym: "testis- neonate N30" EXACT [] is_a: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000473 ! testis [Term] id: FF:0011496 name: mouse thymus- neonate N25 sample namespace: FANTOM synonym: "thymus- neonate N25" EXACT [] is_a: FF:0000309 ! mouse neonate N25 sample intersection_of: FF:0000309 ! mouse neonate N25 sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0011497 name: mouse thymus- neonate N30 sample namespace: FANTOM synonym: "thymus- neonate N30" EXACT [] is_a: FF:0000310 ! mouse neonate N30 sample intersection_of: FF:0000310 ! mouse neonate N30 sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0011498 name: mouse stomach, neonate N03 sample namespace: FANTOM synonym: "stomach, neonate N03" EXACT [] is_a: FF:0000311 ! mouse neonate N3 sample intersection_of: FF:0000311 ! mouse neonate N3 sample intersection_of: derives_from UBERON:0000945 ! stomach relationship: derives_from UBERON:0000945 ! stomach [Term] id: FF:0011504 name: mouse intestine- neonate N01 sample namespace: FANTOM synonym: "intestine- neonate N01" EXACT [] is_a: FF:0000734 ! mouse neonate N1 sample intersection_of: FF:0000734 ! mouse neonate N1 sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0011505 name: mouse adrenal gland - neonate N00 sample namespace: FANTOM synonym: "adrenal gland - neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0002369 ! adrenal gland relationship: derives_from UBERON:0002369 ! adrenal gland [Term] id: FF:0011506 name: mouse epididymis and seminiferous tubule- neonate N00 sample namespace: FANTOM synonym: "epididymis and seminiferous tubule- neonate N00" EXACT [] is_a: FF:0011509 ! mouse testis- neonate N00 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0001301 ! epididymis intersection_of: derives_from UBERON:0001343 ! seminiferous tubule of testis relationship: derives_from UBERON:0001301 ! epididymis relationship: derives_from UBERON:0001343 ! seminiferous tubule of testis [Term] id: FF:0011507 name: mouse pituitary gland- neonate N00 sample namespace: FANTOM synonym: "pituitary gland- neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0000007 ! pituitary gland relationship: derives_from UBERON:0000007 ! pituitary gland [Term] id: FF:0011508 name: mouse TSt-4/DLL1 feeder cells sample namespace: FANTOM synonym: "TSt-4/DLL1 feeder cells" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000103 ! mouse sample is_a: FF:0000343 ! control treatment sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0101120 ! epithelial cell line sample relationship: derives_from CL:0002293 ! epithelial cell of thymus [Term] id: FF:0011509 name: mouse testis- neonate N00 sample namespace: FANTOM synonym: "testis- neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000473 ! testis [Term] id: FF:0011510 name: mouse ovary, neonate N00 sample namespace: FANTOM synonym: "ovary, neonate N00" EXACT [] is_a: FF:0000304 ! mouse neonate N0 sample intersection_of: FF:0000304 ! mouse neonate N0 sample intersection_of: derives_from UBERON:0000992 ! female gonad relationship: derives_from UBERON:0000992 ! female gonad [Term] id: FF:0011511 name: mouse intestine- embryo E18 sample namespace: FANTOM synonym: "intestine- embryo E18" EXACT [] is_a: FF:0000302 ! mouse embryonic day 18 sample intersection_of: FF:0000302 ! mouse embryonic day 18 sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0011512 name: mouse kidney- embryo E18 sample namespace: FANTOM synonym: "kidney- embryo E18" EXACT [] is_a: FF:0000302 ! mouse embryonic day 18 sample intersection_of: FF:0000302 ! mouse embryonic day 18 sample intersection_of: derives_from UBERON:0002113 ! kidney relationship: derives_from UBERON:0002113 ! kidney [Term] id: FF:0011513 name: mouse lung- embryo E18 sample namespace: FANTOM synonym: "lung- embryo E18" EXACT [] is_a: FF:0000302 ! mouse embryonic day 18 sample intersection_of: FF:0000302 ! mouse embryonic day 18 sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0011514 name: mouse stomach- embryo E18 sample namespace: FANTOM synonym: "stomach- embryo E18" EXACT [] is_a: FF:0000302 ! mouse embryonic day 18 sample intersection_of: FF:0000302 ! mouse embryonic day 18 sample intersection_of: derives_from UBERON:0000945 ! stomach relationship: derives_from UBERON:0000945 ! stomach [Term] id: FF:0011515 name: mouse heart- embryo E18 sample namespace: FANTOM synonym: "heart- embryo E18" EXACT [] is_a: FF:0000302 ! mouse embryonic day 18 sample intersection_of: FF:0000302 ! mouse embryonic day 18 sample intersection_of: derives_from UBERON:0000948 ! heart relationship: derives_from UBERON:0000948 ! heart [Term] id: FF:0011516 name: mouse thymus- embryo E18 sample namespace: FANTOM synonym: "thymus- embryo E18" EXACT [] is_a: FF:0000302 ! mouse embryonic day 18 sample intersection_of: FF:0000302 ! mouse embryonic day 18 sample intersection_of: derives_from UBERON:0002370 ! thymus relationship: derives_from UBERON:0002370 ! thymus [Term] id: FF:0011517 name: mouse spleen-, embryo E18 sample namespace: FANTOM synonym: "spleen-, embryo E18" EXACT [] is_a: FF:0000302 ! mouse embryonic day 18 sample intersection_of: FF:0000302 ! mouse embryonic day 18 sample intersection_of: derives_from UBERON:0002106 ! spleen relationship: derives_from UBERON:0002106 ! spleen [Term] id: FF:0011518 name: adrenal gland - embryo E18 sample namespace: FANTOM synonym: "adrenal gland - embryo E18" EXACT [] is_a: FF:0000302 ! mouse embryonic day 18 sample intersection_of: FF:0000302 ! mouse embryonic day 18 sample intersection_of: derives_from UBERON:0002369 ! adrenal gland relationship: derives_from UBERON:0002369 ! adrenal gland [Term] id: FF:0011519 name: mouse pituitary gland- embryo E17 sample namespace: FANTOM synonym: "pituitary gland- embryo E17" EXACT [] is_a: FF:0000300 ! mouse embryonic day 17 sample intersection_of: FF:0000300 ! mouse embryonic day 17 sample intersection_of: derives_from UBERON:0000007 ! pituitary gland relationship: derives_from UBERON:0000007 ! pituitary gland [Term] id: FF:0011520 name: adrenal gland - embryo E17 sample namespace: FANTOM synonym: "adrenal gland - embryo E17" EXACT [] is_a: FF:0000300 ! mouse embryonic day 17 sample intersection_of: FF:0000300 ! mouse embryonic day 17 sample intersection_of: derives_from UBERON:0002369 ! adrenal gland relationship: derives_from UBERON:0002369 ! adrenal gland [Term] id: FF:0011521 name: mouse eyeball- embryo E17 sample namespace: FANTOM synonym: "eyeball- embryo E17" EXACT [] is_a: FF:0000300 ! mouse embryonic day 17 sample intersection_of: FF:0000300 ! mouse embryonic day 17 sample intersection_of: derives_from UBERON:0010230 ! eyeball of camera-type eye relationship: derives_from UBERON:0010230 ! eyeball of camera-type eye [Term] id: FF:0011522 name: mouse adrenal gland - embryo E16 sample namespace: FANTOM synonym: "adrenal gland - embryo E16" EXACT [] is_a: FF:0000299 ! mouse embryonic day 16 sample intersection_of: FF:0000299 ! mouse embryonic day 16 sample intersection_of: derives_from UBERON:0002369 ! adrenal gland relationship: derives_from UBERON:0002369 ! adrenal gland [Term] id: FF:0011523 name: mouse stomach- embryo E15 sample namespace: FANTOM synonym: "stomach- embryo E15" EXACT [] is_a: FF:0000298 ! mouse embryonic day 15 sample intersection_of: FF:0000298 ! mouse embryonic day 15 sample intersection_of: derives_from UBERON:0000945 ! stomach relationship: derives_from UBERON:0000945 ! stomach [Term] id: FF:0011524 name: mouse natural helper cells- IL2 treated, day15 sample namespace: FANTOM synonym: "natural helper cells- IL2 treated, day15" EXACT [] is_a: FF:0000295 ! mouse embryonic day 12 sample is_a: FF:0000391 ! 15 days sample is_a: FF:0011137 ! mouse natural helper cells- IL2 treated sample intersection_of: EFO:0001746 ! development or differentiation design intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000295 ! mouse embryonic day 12 sample intersection_of: FF:0000350 ! experimentally modified sample intersection_of: FF:0000391 ! 15 days sample intersection_of: FF:0000636 ! IL-2 treatment sample intersection_of: derives_from CL:0002679 ! natural helper lymphocyte relationship: derives_from CL:0002679 ! natural helper lymphocyte [Term] id: FF:0011525 name: cortex- adult sample namespace: FANTOM comment: todo - check uberon synonym: "cortex- adult" EXACT [] is_a: FF:0000998 ! adult tissue sample intersection_of: FF:0000998 ! adult tissue sample intersection_of: derives_from UBERON:0000956 ! cerebral cortex relationship: derives_from UBERON:0000956 ! cerebral cortex [Term] id: FF:0100003 name: intestinal cell line sample namespace: FANTOM5 synonym: "intestinal cell line" EXACT [] xref: BTO:0000003 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from UBERON:0000160 ! intestine relationship: derives_from UBERON:0000160 ! intestine [Term] id: FF:0100007 name: HEK-293 cell sample namespace: FANTOM5 def: "Established from a human primary embryonal kidney transformed by adenovirus type 5." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "293 cell" RELATED [] synonym: "A-293 cell" RELATED [] synonym: "A293 cell" RELATED [] synonym: "HEK cell" RELATED [] synonym: "HEK-293 cell" EXACT [] synonym: "HEK293 cell" RELATED [] synonym: "human embryonal kidney cell" RELATED [] synonym: "human embryonic kidney cell" RELATED [] xref: BTO:0000007 is_a: FF:0102733 ! embryonic kidney cell line sample [Term] id: FF:0100016 name: A-172 cell sample namespace: FANTOM5 def: "Human brain glioblastoma cell line. Established from a 53 year old man." [ATCC_American_Cell_Type_Culture_Collection:http\://www.lgcstandards-atcc.org/] synonym: "A-172 cell" EXACT [] synonym: "A172 cell" RELATED [] xref: BTO:0000016 is_a: FF:0101530 ! glioblastoma cell line sample [Term] id: FF:0100017 name: A-431 cell sample namespace: FANTOM5 def: "Human epidermoid carcinoma established from the solid tumor of an 85-year-old woman; cells were reported to have large numbers of EGF binding sites; cell line was used as indicator cell line for anti-TGF binding." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "A-431 cell" EXACT [] synonym: "A431 cell" RELATED [] xref: BTO:0000017 is_a: FF:0102024 ! squamous cell carcinoma cell line sample relationship: derives_from UBERON:0000997 ! mammalian vulva [Term] id: FF:0100018 name: A-549 cell sample namespace: FANTOM5 def: "Human lung carcinoma established from an explanted lung tumor which was removed from a 58-year-old Caucasian man in 1972; cells were described to induce tumors in athymic mice and to synthesize lecithin." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "A-549 cell" EXACT [] synonym: "A549 cell" RELATED [] synonym: "NCI-A549 cell" RELATED [] xref: BTO:0000018 is_a: FF:0104078 ! non-small cell lung adenocarcinoma cell line sample [Term] id: FF:0100067 name: kidney cell line sample namespace: FANTOM5 synonym: "kidney cell line" EXACT [] synonym: "renal cell line" RELATED [] xref: BTO:0000067 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from UBERON:0002113 ! kidney relationship: derives_from UBERON:0002113 ! kidney [Term] id: FF:0100093 name: MCF-7 cell sample namespace: FANTOM5 def: "Human breast adenocarcinoma, established from the pleural effusion of a 69-year-old caucasian woman with metastatic mammary carcinoma (after radio- and hormone therapy) in 1970; cells were described of being positive for cytoplasmic estrogen receptors and having the capability to form domes." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "MCF-7 cell" EXACT [] synonym: "MCF7 cell" RELATED [] xref: BTO:0000093 is_a: FF:0101912 ! breast adenocarcinoma cell line sample [Term] id: FF:0100101 name: astrocytoma cell line sample namespace: FANTOM5 synonym: "astrocytoma cell line" EXACT [] xref: BTO:0000101 is_a: FF:0100711 ! glioma cell line sample intersection_of: FF:0100711 ! glioma cell line sample intersection_of: derives_from CL:0000127 ! astrocyte relationship: derives_from CL:0000127 ! astrocyte [Term] id: FF:0100104 name: lymphoma cell line sample namespace: FANTOM5 def: "Lymphoma means any neoplastic disorder of the lymphoid tissue." [Dorlands_Medical_Dictionary:MerckSource] synonym: "lymphadenoma cell line" RELATED [] synonym: "lymphoma cell line" EXACT [] xref: BTO:0000104 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:0060058 ! lymphoma relationship: is_model_for DOID:0060058 ! lymphoma [Term] id: FF:0100161 name: lung fibroblast cell line sample namespace: FANTOM5 synonym: "lung fibroblast cell line" EXACT [] xref: BTO:0000161 is_a: FF:0100353 ! lung cell line sample is_a: FF:0100453 ! fibroblast cell line sample intersection_of: FF:0100353 ! lung cell line sample intersection_of: FF:0100453 ! fibroblast cell line sample intersection_of: derives_from CL:0002553 ! lung fibroblast relationship: derives_from CL:0002553 ! lung fibroblast [Term] id: FF:0100167 name: adenocarcinoma cell line sample namespace: FANTOM5 synonym: "adenocarcinoma cell line" EXACT [] xref: BTO:0000167 is_a: FF:0100297 ! carcinoma cell line sample intersection_of: FF:0100297 ! carcinoma cell line sample intersection_of: is_model_for DOID:299 ! adenocarcinoma relationship: is_model_for DOID:299 ! adenocarcinoma [Term] id: FF:0100189 name: small cell lung cancer cell sample namespace: FANTOM5 def: "A cell of a common, highly malignant form of bronchogenic carcinoma in the wall of a major bronchus, occurring mainly in middle-aged individuals with a history of tobacco smoking; it is radiosensitive and has small oval undifferentiated cells that are intensely hematoxyphilic. Metastasis to the hilum and to mediastinal lymph nodes is common." [Dorlands_Medical_Dictionary:MerckSource] synonym: "SCLC cell" RELATED [] synonym: "small cell carcinoma cell" RELATED [] synonym: "small cell lung cancer cell" EXACT [] synonym: "small cell lung carcinoma cell" RELATED [] xref: BTO:0000189 is_a: FF:0102061 ! bronchogenic carcinoma cell sample is_a: FF:0102206 ! small cell lung cancer cell line sample intersection_of: FF:0102061 ! bronchogenic carcinoma cell sample intersection_of: is_model_for DOID:5409 ! lung small cell carcinoma relationship: is_model_for DOID:5409 ! lung small cell carcinoma [Term] id: FF:0100195 name: CACO-2 cell sample namespace: FANTOM5 def: "Human colon adenocarcinoma cell line, established from the primary colon tumor (adenocarcinoma) of a 72-year-old Caucasian man in 1974." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "CACO-2 cell" EXACT [] synonym: "Caco-2 cell" RELATED [] xref: BTO:0000195 is_a: FF:0101913 ! colonic adenocarcinoma cell line sample [Term] id: FF:0100197 name: carcinosarcoma cell sample namespace: FANTOM5 def: "A cell of a malignant tumor that is a mixture of carcinoma (cancer of epithelial tissue, which is skin and tissue that lines or covers the internal organs) and sarcoma (cancer of connective tissue, such as bone, cartilage, and fat)." [Hyperdictionary:http\://www.hyperdictionary.com/medical/carcinosarcoma] synonym: "carcinosarcoma cell" EXACT [] xref: BTO:0000197 is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0100400 ! sarcoma cell line sample intersection_of: FF:0100297 ! carcinoma cell line sample intersection_of: FF:0100400 ! sarcoma cell line sample intersection_of: is_model_for DOID:4236 ! carcinosarcoma relationship: is_model_for DOID:4236 ! carcinosarcoma [Term] id: FF:0100224 name: liver cell line sample namespace: FANTOM5 synonym: "liver cell line" EXACT [] xref: BTO:0000224 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from UBERON:0002107 ! liver relationship: derives_from UBERON:0002107 ! liver [Term] id: FF:0100255 name: brain cell line sample namespace: FANTOM5 synonym: "brain cell line" EXACT [] xref: BTO:0000255 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from UBERON:0000955 ! brain relationship: derives_from UBERON:0000955 ! brain [Term] id: FF:0100297 name: carcinoma cell line sample namespace: FANTOM5 def: "A cell line derived from malignant new growth made up of epithelial cells tending to infiltrate the surrounding tissues and give rise to metastases." [GOC:tfm] synonym: "carcinoma cell line" EXACT [] xref: BTO:0000297 is_a: FF:0101120 ! epithelial cell line sample intersection_of: FF:0101120 ! epithelial cell line sample intersection_of: is_model_for DOID:305 ! carcinoma relationship: is_model_for DOID:305 ! carcinoma [Term] id: FF:0100306 name: teratocarcinoma cell line sample namespace: FANTOM5 synonym: "teratocarcinoma cell line" EXACT [] xref: BTO:0000306 is_a: FF:0100297 ! carcinoma cell line sample intersection_of: FF:0100297 ! carcinoma cell line sample intersection_of: is_model_for DOID:3095 ! germ cell and embryonal cancer relationship: is_model_for DOID:3095 ! germ cell and embryonal cancer [Term] id: FF:0100353 name: lung cell line sample namespace: FANTOM5 synonym: "lung cell line" EXACT [] xref: BTO:0000353 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from UBERON:0002048 ! lung relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:0100356 name: breast cancer cell line sample namespace: FANTOM5 synonym: "breast cancer cell line" EXACT [] xref: BTO:0000356 is_a: FF:0100816 ! breast cell line sample intersection_of: FF:0100816 ! breast cell line sample intersection_of: is_model_for DOID:1612 ! breast cancer relationship: is_model_for DOID:1612 ! breast cancer [Term] id: FF:0100383 name: renal cell carcinoma cell line sample namespace: FANTOM5 synonym: "hypernephroma cell line" RELATED [] synonym: "kidney adenocarcinoma cell line" RELATED [] synonym: "RCC cell line" RELATED [] synonym: "renal cell adenocarcinoma cell line" RELATED [] synonym: "renal cell carcinoma cell line" EXACT [] xref: BTO:0000383 is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0103192 ! renal cancer cell line sample intersection_of: FF:0100297 ! carcinoma cell line sample intersection_of: FF:0103192 ! renal cancer cell line sample intersection_of: derives_from CL:0002518 ! kidney epithelial cell relationship: derives_from CL:0002518 ! kidney epithelial cell [Term] id: FF:0100385 name: bone cancer cell line sample namespace: FANTOM5 synonym: "bone cancer cell line" EXACT [] xref: BTO:0000385 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:184 ! bone cancer relationship: is_model_for DOID:184 ! bone cancer [Term] id: FF:0100400 name: sarcoma cell line sample namespace: FANTOM5 synonym: "sarcoma cell line" EXACT [] xref: BTO:0000400 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:1115 ! sarcoma relationship: is_model_for DOID:1115 ! sarcoma [Term] id: FF:0100407 name: osteosarcoma cell line sample namespace: FANTOM5 synonym: "osteosarcoma cell line" EXACT [] xref: BTO:0000407 is_a: FF:0100385 ! bone cancer cell line sample intersection_of: FF:0100385 ! bone cancer cell line sample intersection_of: is_model_for DOID:3347 ! osteosarcoma relationship: is_model_for DOID:3347 ! osteosarcoma [Term] id: FF:0100453 name: fibroblast cell line sample namespace: FANTOM5 synonym: "FCL" RELATED [] synonym: "fibroblast cell line" EXACT [] xref: BTO:0000453 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from CL:0000057 ! fibroblast relationship: derives_from CL:0000057 ! fibroblast [Term] id: FF:0100460 name: fibrosarcoma cell line sample namespace: FANTOM5 synonym: "fibrosarcoma cell line" EXACT [] xref: BTO:0000460 is_a: FF:0100400 ! sarcoma cell line sample is_a: FF:0100453 ! fibroblast cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:3355 ! fibrosarcoma relationship: is_model_for DOID:3355 ! fibrosarcoma [Term] id: FF:0100578 name: hepatoma cell line sample namespace: FANTOM5 def: "Primary carcinoma of the liver cells. It ranges from a well-differentiated tumour difficult to distinguish from normal hepatocytes to a poorly differentiated neoplasm. The cells may be uniform or markedly pleomorphic or may form giant cells. Several classification schemes have been suggested. Hepatocellular carcinoma is very rare in the united states and western europe, but it is one of the most common cancers in eastern asia and sub-saharan africa. The cases are preponderantly male and, racially, whites have the lowest rates." [GOC:tfm] synonym: "HCC cell line" RELATED [] synonym: "hepatocarcinoma cell line" RELATED [] synonym: "hepatocellular carcinoma cell line" RELATED [] synonym: "hepatoma cell line" EXACT [] xref: BTO:0000578 is_a: FF:0100224 ! liver cell line sample is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0101533 ! gastrointestinal cancer cell sample intersection_of: FF:0100297 ! carcinoma cell line sample intersection_of: is_model_for DOID:684 ! hepatocellular carcinoma relationship: derives_from CL:0000182 ! hepatocyte relationship: is_model_for DOID:684 ! hepatocellular carcinoma [Term] id: FF:0100583 name: bone marrow cancer cell sample namespace: FANTOM5 synonym: "bone marrow cancer cell" EXACT [] xref: BTO:0000583 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:4960 ! bone marrow cancer relationship: derives_from CL:0002092 ! bone marrow cell relationship: is_model_for DOID:4960 ! bone marrow cancer [Term] id: FF:0100599 name: Hep-G2 cell sample namespace: FANTOM5 def: "Human hepatocellular carcinoma, established from the tumor tissue of a 15-year-old Argentine boy with hepatocellular carcinoma in 1975." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "Hep-G2 cell" EXACT [] synonym: "HepG2 cell" RELATED [] xref: BTO:0000599 is_a: FF:0100578 ! hepatoma cell line sample [Term] id: FF:0100603 name: pre-B acute lymphoblastic leukemia cell line sample namespace: FANTOM5 synonym: "pre-B acute lymphoblastic leukemia cell line" EXACT [] synonym: "pre-B leukemia cell line" RELATED [] xref: BTO:0000603 is_a: FF:0102062 ! B-lymphoblastoid cell line sample is_a: FF:0102144 ! acute lymphoblastic leukemia cell line sample intersection_of: FF:0102144 ! acute lymphoblastic leukemia cell line sample intersection_of: derives_from CL:0000817 ! precursor B cell relationship: derives_from CL:0000817 ! precursor B cell [Term] id: FF:0100658 name: uterine adenocarcinoma cell sample namespace: FANTOM5 def: "The most common form of endometrial carcinoma, containing tumor cells differentiated into glandular tissue with little or no stroma." [Dorlands_Medical_Dictionary:MerckSource] synonym: "endometrial adenocarcinoma cell" RELATED [] synonym: "endometrial carcinoma cell" RELATED [] synonym: "endometrioid adenocarcinoma cell" RELATED [] synonym: "uterine adenocarcinoma cell" EXACT [] synonym: "uterine cancer cell" RELATED [] xref: BTO:0000658 is_a: FF:0100167 ! adenocarcinoma cell line sample intersection_of: FF:0100167 ! adenocarcinoma cell line sample intersection_of: derives_from UBERON:0000995 ! uterus relationship: derives_from UBERON:0000995 ! uterus [Term] id: FF:0100661 name: JURKAT cell sample namespace: FANTOM5 def: "Human T cell leukemia, established from the peripheral blood of a 14-year-old boy with acute lymphoblastic leukemia (ALL) at first relapse in 1976; often this cell line is called JM (JURKAT and JM are derived from the same patient and are sister clones), occasionally JM may be a subclone with somewhat divergent features." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "JM cell" RELATED [] synonym: "JURKAT cell" EXACT [] xref: BTO:0000661 is_a: FF:0102144 ! acute lymphoblastic leukemia cell line sample is_a: FF:0102504 ! T-lymphoblastic leukemia cell line sample [Term] id: FF:0100664 name: K-562 cell sample namespace: FANTOM5 def: "Human chronic myeloid leukemia in blast crisis established from the pleural effusion of a 53-year-old woman with chronic myeloid leukemia (CML) in blast crisis in 1970; cells can be used as highly sensitive targets in in-vitro natural killer assays; cells produce hemoglobin; cells carry the Philadelphia chromosome with a b3-a2 fusion gene." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "K-562 cell" EXACT [] synonym: "K562 cell" RELATED [] synonym: "K562wt cell" RELATED [] xref: BTO:0000664 is_a: FF:0102580 ! chronic myeloid leukemia cell line sample [Term] id: FF:0100669 name: embryonic cell line sample namespace: FANTOM5 synonym: "embryonic cell line" EXACT [] xref: BTO:0000669 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from UBERON:0000922 ! embryo relationship: derives_from UBERON:0000922 ! embryo [Term] id: FF:0100678 name: G-402 cell sample namespace: FANTOM5 def: "Human Caucasian renal leiomyoblastoma cell line, derived from a tumour of a 9-month-old female Caucasian. Highly transformed and grows in soft agar." [HyperCLDB:http\://www.biotech.ist.unige.it/] synonym: "G-402 cell" EXACT [] xref: BTO:0000678 is_a: FF:0103192 ! renal cancer cell line sample [Term] id: FF:0100690 name: brain cancer cell line sample namespace: FANTOM5 synonym: "brain cancer cell line" EXACT [] synonym: "brain tumor cell line" RELATED [] xref: BTO:0000690 is_a: FF:0100255 ! brain cell line sample intersection_of: FF:0100255 ! brain cell line sample intersection_of: is_model_for DOID:1319 ! brain cancer relationship: is_model_for DOID:1319 ! brain cancer [Term] id: FF:0100711 name: glioma cell line sample namespace: FANTOM5 synonym: "glioma cell line" EXACT [] synonym: "neuroglioma cell line" RELATED [] xref: BTO:0000711 is_a: FF:0100690 ! brain cancer cell line sample is_a: FF:0101531 ! glial cell line sample intersection_of: FF:0100255 ! brain cell line sample intersection_of: is_model_for DOID:3070 ! malignant glioma relationship: is_model_for DOID:3070 ! malignant glioma [Term] id: FF:0100729 name: carcinoid cell sample namespace: FANTOM5 def: "A cell of a benign or malignant tumor arising especially from the mucosa of the gastrointestinal tract." [From_Merriam-Webster's_Online_Dictionary_at_www.Merriam-Webster.com:http\://www.m-w.com/cgi-bin/dictionary?book=Dictionary&va=carcinoid] synonym: "carcinoid cell" EXACT [] xref: BTO:0000729 is_a: FF:0101533 ! gastrointestinal cancer cell sample [Term] id: FF:0100732 name: KU-812 cell sample namespace: FANTOM5 def: "Human chronic myeloid leukemia in myeloid blast crisis, established from the peripheral blood of a 38-year-old man with chronic myeloid leukemia (CML) in myeloid blast crisis; described to express basophilic features." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "KU-812 cell" EXACT [] synonym: "KU812 cell" RELATED [] xref: BTO:0000732 is_a: FF:0102580 ! chronic myeloid leukemia cell line sample [Term] id: FF:0100737 name: leukemia cell line sample namespace: FANTOM5 synonym: "leukemia cell line" EXACT [] xref: BTO:0000737 is_a: FF:0101035 ! hematopoietic cell line sample intersection_of: FF:0101035 ! hematopoietic cell line sample intersection_of: is_model_for DOID:1240 ! leukemia relationship: is_model_for DOID:1240 ! leukemia [Term] id: FF:0100739 name: lymphoblastic leukemia cell line sample namespace: FANTOM5 def: "Lymphocytic leukemia cell line characterized by an abnormal increase in the number of lymphoblasts." [From_Merriam-Webster's_Online_Dictionary_at_www.Merriam-Webster.com:http\://www.m-w.com/cgi-bin/dictionary?book=Dictionary&va=lymphoblastic_leukemia] synonym: "lymphoblastic leukemia cell line" EXACT [] xref: BTO:0000739 is_a: FF:0100741 ! lymphocytic leukemia cell line sample is_a: FF:0100773 ! lymphoblastoid cell line sample intersection_of: FF:0100741 ! lymphocytic leukemia cell line sample intersection_of: FF:0100773 ! lymphoblastoid cell line sample [Term] id: FF:0100740 name: myeloid leukemia cell line sample namespace: FANTOM5 def: "A cell line of leukemia characterized by proliferation of myeloid tissue (as of the bone marrow and spleen) and an abnormal increase in the number of granulocytes, myelocytes, and myeloblasts in the circulating blood." [From_Merriam-Webster's_Online_Dictionary_at_www.Merriam-Webster.com:http\://www.m-w.com/cgi-bin/dictionary?book=Dictionary&va=myeloid] synonym: "granulocytic leukemia cell line" RELATED [] synonym: "myelocytic leukemia cell line" RELATED [] synonym: "myelogenous leukemia cell line" RELATED [] synonym: "myeloid leukemia cell line" EXACT [] xref: BTO:0000740 is_a: FF:0100737 ! leukemia cell line sample intersection_of: FF:0100737 ! leukemia cell line sample intersection_of: is_model_for DOID:8692 ! myeloid leukemia relationship: derives_from CL:0000763 ! myeloid cell relationship: is_model_for DOID:8692 ! myeloid leukemia [Term] id: FF:0100741 name: lymphocytic leukemia cell line sample namespace: FANTOM5 synonym: "lymphocytic leukemia cell line" EXACT [] xref: BTO:0000741 is_a: FF:0100737 ! leukemia cell line sample [Term] id: FF:0100762 name: lung cancer cell line sample namespace: FANTOM5 alt_id: FF:0100551 def: "Cancer cell of the major organ of respiration the lung." [] comment: todo - check synonym: "lung cancer cell" EXACT [] synonym: "lung cancer cell line" EXACT [] synonym: "lung carcinoma cell" RELATED [] synonym: "lung carcinoma cell line" RELATED [] xref: BTO:0000551 xref: BTO:0000762 is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0100353 ! lung cell line sample intersection_of: FF:0100353 ! lung cell line sample intersection_of: is_model_for DOID:1324 ! lung cancer relationship: derives_from CL:0000082 ! epithelial cell of lung relationship: is_model_for DOID:1324 ! lung cancer [Term] id: FF:0100773 name: lymphoblastoid cell line sample namespace: FANTOM5 def: "Human cell line from tissue infected with Epstein-Barr virus, resembling a lymphoblast." [Fast_Health_Medical_Dictionary:http\://www.fasthealth.com/dictionary/] synonym: "lymphoblastoid cell" RELATED [] synonym: "lymphoblastoid cell line" EXACT [] xref: BTO:0000773 is_a: FF:0101035 ! hematopoietic cell line sample relationship: derives_from CL:0000542 ! lymphocyte [Term] id: FF:0100786 name: tongue cancer cell line sample namespace: FANTOM5 synonym: "tongue cancer cell line" EXACT [] xref: BTO:0000786 is_a: FF:0102027 ! oral cancer cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:8649 ! tongue cancer relationship: derives_from UBERON:0001723 ! tongue relationship: is_model_for DOID:8649 ! tongue cancer [Term] id: FF:0100787 name: gastric cancer cell line sample namespace: FANTOM5 synonym: "gastric cancer cell line" EXACT [] xref: BTO:0000787 is_a: FF:0101533 ! gastrointestinal cancer cell sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:10534 ! stomach cancer relationship: derives_from UBERON:0000945 ! stomach relationship: is_model_for DOID:10534 ! stomach cancer [Term] id: FF:0100790 name: pharyngeal cancer cell line sample namespace: FANTOM5 synonym: "pharyngeal cancer cell line" EXACT [] synonym: "pharynx carcinoma cell line" RELATED [] xref: BTO:0000790 is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0100819 ! pharyngeal cell line sample is_a: FF:0101533 ! gastrointestinal cancer cell sample intersection_of: FF:0100819 ! pharyngeal cell line sample intersection_of: is_model_for DOID:0060119 ! pharynx cancer relationship: derives_from CL:0002251 ! epithelial cell of alimentary canal relationship: is_model_for DOID:0060119 ! pharynx cancer [Term] id: FF:0100792 name: urinary bladder cancer cell line sample namespace: FANTOM5 synonym: "urinary bladder cancer cell line" EXACT [] synonym: "urinary bladder carcinoma cell line" RELATED [] xref: BTO:0000792 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from UBERON:0004645 ! urinary bladder urothelium relationship: derives_from UBERON:0004645 ! urinary bladder urothelium [Term] id: FF:0100794 name: pancreatic cancer cell line sample namespace: FANTOM5 synonym: "pancreatic cancer cell line" EXACT [] xref: BTO:0000794 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:1793 ! pancreatic cancer relationship: derives_from UBERON:0001264 ! pancreas relationship: is_model_for DOID:1793 ! pancreatic cancer [Term] id: FF:0100798 name: BeWo cell sample namespace: FANTOM5 def: "Human placenta choriocarcinoma cell line." [HyperCLDB:http\://www.biotech.ist.unige.it/] synonym: "BEWO cell" RELATED [] synonym: "BeWo cell" EXACT [] xref: BTO:0000798 is_a: FF:0101575 ! choriocarcinoma cell line sample [Term] id: FF:0100811 name: ovary cancer cell line sample namespace: FANTOM5 synonym: "ovarian cancer cell line" RELATED [] synonym: "ovarian carcinoma cell line" RELATED [] synonym: "ovary cancer cell line" EXACT [] xref: BTO:0000811 is_a: FF:0100977 ! ovary cell line sample intersection_of: FF:0100977 ! ovary cell line sample intersection_of: is_model_for DOID:2394 ! ovarian cancer relationship: is_model_for DOID:2394 ! ovarian cancer [Term] id: FF:0100816 name: breast cell line sample namespace: FANTOM5 synonym: "breast cell line" EXACT [] xref: BTO:0000816 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from UBERON:0000310 ! breast relationship: derives_from UBERON:0000310 ! breast [Term] id: FF:0100819 name: pharyngeal cell line sample namespace: FANTOM5 synonym: "pharyngeal cell line" EXACT [] synonym: "pharynx cell line" RELATED [] xref: BTO:0000819 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from UBERON:0006562 ! pharynx relationship: derives_from UBERON:0006562 ! pharynx [Term] id: FF:0100834 name: Detroit 562 cell sample namespace: FANTOM5 def: "Human, Caucasian female, pharynx, carcinoma cell line." [HyperCLDB:http\://www.biotech.ist.unige.it/] synonym: "Detroit 562 cell" EXACT [] xref: BTO:0000834 is_a: FF:0100790 ! pharyngeal cancer cell line sample [Term] id: FF:0100849 name: melanoma cell line sample namespace: FANTOM5 synonym: "melanoma cell line" EXACT [] xref: BTO:0000849 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:1909 ! melanoma relationship: derives_from UBERON:0001003 ! epidermis relationship: is_model_for DOID:1909 ! melanoma [Term] id: FF:0100889 name: Burkitt lymphoma cell line sample namespace: FANTOM5 synonym: "Burkitt lymphoma cell line" EXACT [] synonym: "Burkitt's lymphoma cell line" RELATED [] xref: BTO:0000889 is_a: FF:0100104 ! lymphoma cell line sample intersection_of: FF:0100104 ! lymphoma cell line sample intersection_of: is_model_for DOID:8584 ! Burkitt's lymphoma relationship: is_model_for DOID:8584 ! Burkitt's lymphoma [Term] id: FF:0100898 name: myeloma cell sample namespace: FANTOM5 def: "A primary tumor cell of the bone marrow." [From_Merriam-Webster's_Online_Dictionary_at_www.Merriam-Webster.com:http\://www.m-w.com/cgi-bin/dictionary?book=Dictionary&va=myeloma] synonym: "myeloma cell" EXACT [] xref: BTO:0000898 is_a: FF:0100583 ! bone marrow cancer cell sample intersection_of: FF:0100583 ! bone marrow cancer cell sample intersection_of: is_model_for DOID:0070004 ! myeloma relationship: is_model_for DOID:0070004 ! myeloma [Term] id: FF:0100899 name: myeloma cell line sample namespace: FANTOM5 synonym: "myeloma cell line" EXACT [] xref: BTO:0000899 is_a: FF:0100898 ! myeloma cell sample is_a: FF:0101522 ! B-lymphocyte cell line sample intersection_of: FF:0100898 ! myeloma cell sample intersection_of: derives_from CL:0000945 ! lymphocyte of B lineage relationship: derives_from CL:0000945 ! lymphocyte of B lineage [Term] id: FF:0100919 name: 8305C cell sample namespace: FANTOM5 def: "Human thyroid carcinoma cell line, established from the primary tumor of a 67-year-old woman with primary thyroid undifferentiated carcinoma." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "8305-C cell" RELATED [] synonym: "8305C cell" EXACT [] xref: BTO:0000919 is_a: FF:0103209 ! anaplastic thyroid cancer cell line sample [Term] id: FF:0100932 name: neuroblastoma cell line sample namespace: FANTOM5 synonym: "NBL cell line" RELATED [] synonym: "neuroblastoma cell line" EXACT [] xref: BTO:0000932 is_a: FF:0000003 ! cell line sample relationship: derives_from CL:0000333 ! migratory neural crest cell relationship: derives_from UBERON:0000013 ! sympathetic nervous system relationship: is_model_for DOID:169 ! neuroendocrine tumor [Term] id: FF:0100969 name: osteoclastoma cell sample namespace: FANTOM5 def: "An osteolytic tumor cell affecting the metaphyses and epiphyses of long bones, composed of a stroma of spindle cells containing dispersed multinucleate giant cells, and usually being benign but sometimes malignant." [Fast_Health_Medical_Dictionary:http\://www.fasthealth.com/dictionary/] synonym: "giant cell myeloma cell" RELATED [] synonym: "giant cell tumor cell" RELATED [] synonym: "giant cell tumor cell of bone" RELATED [] synonym: "osteoclastoma cell" EXACT [] xref: BTO:0000969 is_a: FF:0100583 ! bone marrow cancer cell sample is_a: FF:0103766 ! giant cell tumor cell line sample is_a: FF:0200020 ! osteoclast, bone marrow-derived sample intersection_of: FF:0100583 ! bone marrow cancer cell sample intersection_of: derives_from CL:0000092 ! osteoclast intersection_of: is_model_for DOID:4305 ! bone giant cell tumor relationship: derives_from CL:0000092 ! osteoclast relationship: is_model_for DOID:4305 ! bone giant cell tumor [Term] id: FF:0100971 name: SAOS-2 cell sample namespace: FANTOM5 def: "Human osteogenic sarcoma, established from the primary osteogenic sarcoma of an 11-year-old Caucasian woman in 1973." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "SAOS-2 cell" EXACT [] synonym: "SAOS2 cell" RELATED [] xref: BTO:0000971 is_a: FF:0100407 ! osteosarcoma cell line sample [Term] id: FF:0100977 name: ovary cell line sample namespace: FANTOM5 synonym: "ovary cell line" EXACT [] xref: BTO:0000977 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from UBERON:0000992 ! female gonad relationship: derives_from UBERON:0000992 ! female gonad [Term] id: FF:0101014 name: Mo-T cell sample namespace: FANTOM5 def: "Human hairy cell leukemia T-lymphocyte cell line." [ATCC_American_Cell_Type_Culture_Collection:http\://www.lgcstandards-atcc.org/] synonym: "Mo cell" RELATED [] synonym: "Mo T cell" RELATED [] synonym: "Mo-T cell" EXACT [] xref: BTO:0001014 is_a: FF:0103681 ! hairy cell leukemia cell line sample relationship: derives_from CL:0000084 ! T cell [Term] id: FF:0101019 name: prostate gland cell line sample namespace: FANTOM5 synonym: "prostate cell line" RELATED [] synonym: "prostate gland cell line" EXACT [] xref: BTO:0001019 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from UBERON:0002367 ! prostate gland relationship: derives_from UBERON:0002367 ! prostate gland [Term] id: FF:0101033 name: prostate cancer cell line sample namespace: FANTOM5 synonym: "CaP cell" RELATED [] synonym: "CaP cell line" RELATED [] synonym: "PCa cell" RELATED [] synonym: "PCa cell line" RELATED [] synonym: "prostate cancer cell line" EXACT [] synonym: "prostate carcinoma cell line" RELATED [] synonym: "prostate gland cancer cell line" RELATED [] xref: BTO:0001033 is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0101019 ! prostate gland cell line sample intersection_of: FF:0100297 ! carcinoma cell line sample intersection_of: FF:0101019 ! prostate gland cell line sample intersection_of: is_model_for DOID:10283 ! prostate cancer relationship: is_model_for DOID:10283 ! prostate cancer [Term] id: FF:0101035 name: hematopoietic cell line sample namespace: FANTOM5 synonym: "hematopoietic cell line" EXACT [] xref: BTO:0001035 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from CL:0000988 ! hematopoietic cell relationship: derives_from CL:0000988 ! hematopoietic cell [Term] id: FF:0101061 name: PC-3 cell sample namespace: FANTOM5 def: "Human prostate carcinoma cell line; established from the bone marrow metastasis isolated post-mortem from a 62-year-old Caucasian man with grade IV prostate cancer, poorly differentiated adenocarcinoma, after androgen suppression therapy; described to form tumors in nude mice, to grow in soft agar, and to be unresponsive to androgen treatment." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "PC-3 cell" EXACT [] synonym: "PC3 cell" RELATED [] xref: BTO:0001061 is_a: FF:0101033 ! prostate cancer cell line sample [Term] id: FF:0101092 name: KATO-III cell sample namespace: FANTOM5 def: "Species: human, Mongoloid male 55-year-old; Tissue: stomach; Tumor: carcinoma." [HyperCLDB:http\://www.biotech.ist.unige.it/] synonym: "KATO III cell" RELATED [] synonym: "KATO-III cell" EXACT [] xref: BTO:0001092 is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0100787 ! gastric cancer cell line sample relationship: derives_from CL:0002178 ! epithelial cell of stomach [Term] id: FF:0101120 name: epithelial cell line sample namespace: FANTOM5 synonym: "epithelial cell line" EXACT [] xref: BTO:0001120 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from CL:0000066 ! epithelial cell relationship: derives_from CL:0000066 ! epithelial cell [Term] id: FF:0101154 name: RAJI cell sample namespace: FANTOM5 def: "Human Burkitt's lymphoma cell line, established from the left maxilla of a 12-year-old African boy with Burkitt's lymphoma in 1963; first continuous human hematopoietic cell line; classified as risk category 1 according to the German Central Commission for Biological Safety ZKBS." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "RAJI cell" EXACT [] xref: BTO:0001154 is_a: FF:0100889 ! Burkitt lymphoma cell line sample [Term] id: FF:0101225 name: MKN-45 cell sample namespace: FANTOM5 def: "Human gastric adenocarcinoma, established from the poorly differentiated adenocarcinoma of the stomach (medullary type) of a 62-year-old woman." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "MKN-45 cell" EXACT [] synonym: "MKN45 cell" RELATED [] xref: BTO:0001225 is_a: FF:0102380 ! gastric adenocarcinoma cell line sample [Term] id: FF:0101282 name: HT-1080 cell sample namespace: FANTOM5 def: "Human fibrosarcoma cell line; established from the biopsy from a fibrosarcoma of a 35-year-old Caucasian man in 1972; patient did not receive any chemo- or radiotherapy." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "HT-1080 cell" EXACT [] xref: BTO:0001282 is_a: FF:0100460 ! fibrosarcoma cell line sample [Term] id: FF:0101332 name: DU-145 cell sample namespace: FANTOM5 def: "Human prostate carcinoma, established from the tumor tissue removed from the metastatic central nervous system lesion of a 69-year-old man with prostate carcinoma in 1975." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "DU-145 cell" EXACT [] synonym: "DU145 cell" RELATED [] xref: BTO:0001332 is_a: FF:0101033 ! prostate cancer cell line sample [Term] id: FF:0101359 name: medulloblastoma cell line sample namespace: FANTOM5 synonym: "medulloblastoma cell line" EXACT [] xref: BTO:0001359 is_a: FF:0100711 ! glioma cell line sample [Term] id: FF:0101370 name: THP-1 cell sample namespace: FANTOM5 def: "Human acute monocytic leukemia established from the peripheral blood of a 1-year-old boy with acute monocytic leukemia (AML) at relapse in 1978; the cells can be used for induction of differentiation studies; the cells were described to produce lysozyme and to be phagocytic." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "THP-1 cell" EXACT [] synonym: "THP1 cell" RELATED [] xref: BTO:0001370 is_a: FF:0102332 ! monocytic leukemia cell line sample [Term] id: FF:0101518 name: B-lymphoma cell line sample namespace: FANTOM5 synonym: "B-cell lymphoma cell line" RELATED [] synonym: "B-lymphoma cell line" EXACT [] xref: BTO:0001518 is_a: FF:0100104 ! lymphoma cell line sample is_a: FF:0101522 ! B-lymphocyte cell line sample intersection_of: FF:0100104 ! lymphoma cell line sample intersection_of: derives_from CL:0000945 ! lymphocyte of B lineage relationship: derives_from CL:0000945 ! lymphocyte of B lineage [Term] id: FF:0101522 name: B-lymphocyte cell line sample namespace: FANTOM5 synonym: "B-cell line" RELATED [] synonym: "B-lymphocyte cell line" EXACT [] xref: BTO:0001522 is_a: FF:0101035 ! hematopoietic cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from CL:0000945 ! lymphocyte of B lineage relationship: derives_from CL:0000945 ! lymphocyte of B lineage [Term] id: FF:0101524 name: WIL2-NS cell sample namespace: FANTOM5 def: "Spleen; B lymphocyte; hereditary spherocytosis cell line, established from a caucasion 5 year old male. The line was derived from the WIL-2 B cell line." [ATCC_American_Cell_Type_Culture_Collection:http\://www.lgcstandards-atcc.org/] synonym: "WI-L2-NS" RELATED [] synonym: "WIL2-NS cell" EXACT [] xref: BTO:0001524 is_a: FF:0101518 ! B-lymphoma cell line sample [Term] id: FF:0101530 name: glioblastoma cell line sample namespace: FANTOM5 synonym: "glioblastoma cell line" EXACT [] xref: BTO:0001530 is_a: FF:0100711 ! glioma cell line sample intersection_of: FF:0100711 ! glioma cell line sample intersection_of: is_model_for DOID:3068 ! glioblastoma relationship: is_model_for DOID:3068 ! glioblastoma [Term] id: FF:0101531 name: glial cell line sample namespace: FANTOM5 synonym: "glial cell line" EXACT [] xref: BTO:0001531 is_a: FF:0100255 ! brain cell line sample intersection_of: FF:0100255 ! brain cell line sample intersection_of: derives_from CL:0000243 ! glial cell (sensu Vertebrata) relationship: derives_from CL:0000243 ! glial cell (sensu Vertebrata) [Term] id: FF:0101532 name: rectal cancer cell line sample namespace: FANTOM5 synonym: "rectal cancer cell line" EXACT [] synonym: "rectal tumor cell line" RELATED [] xref: BTO:0001532 is_a: FF:0100003 ! intestinal cell line sample is_a: FF:0101533 ! gastrointestinal cancer cell sample relationship: derives_from UBERON:0001052 ! rectum relationship: is_model_for DOID:3119 ! gastrointestinal system cancer [Term] id: FF:0101533 name: gastrointestinal cancer cell sample namespace: FANTOM5 synonym: "gastrointestinal cancer cell" EXACT [] xref: BTO:0001533 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:3119 ! gastrointestinal system cancer relationship: is_model_for DOID:3119 ! gastrointestinal system cancer [Term] id: FF:0101555 name: endometrial cancer cell line sample namespace: FANTOM5 synonym: "endometrial cancer cell line" EXACT [] synonym: "endometrial carcinoma cell line" RELATED [] xref: BTO:0001555 is_a: FF:0101120 ! epithelial cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:1380 ! endometrial cancer relationship: derives_from CL:0002255 ! stromal cell of endometrium relationship: is_model_for DOID:1380 ! endometrial cancer [Term] id: FF:0101560 name: testicular cancer cell line sample namespace: FANTOM5 synonym: "testicular cancer cell line" EXACT [] xref: BTO:0001560 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:2998 ! testicular cancer relationship: derives_from UBERON:0000473 ! testis relationship: is_model_for DOID:2998 ! testicular cancer [Term] id: FF:0101561 name: DAUDI cell sample namespace: FANTOM5 def: "Human Burkitt's lymphoma cell line; established from the Burkitt's lymphoma (left orbital biopsy) of a 16-year-old African boy in 1967; cells were described to be EBV-positive and to express mRNA for proto-oncogene bcl-2." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "DAUDI cell" EXACT [] xref: BTO:0001561 is_a: FF:0100889 ! Burkitt lymphoma cell line sample [Term] id: FF:0101574 name: chondrosarcoma cell line sample namespace: FANTOM5 synonym: "chondrosarcoma cell line" EXACT [] xref: BTO:0001574 is_a: FF:0100385 ! bone cancer cell line sample intersection_of: FF:0100385 ! bone cancer cell line sample intersection_of: is_model_for DOID:3371 ! chondrosarcoma relationship: derives_from CL:0000138 ! chondrocyte relationship: derives_from UBERON:0002418 ! cartilage tissue relationship: is_model_for DOID:3371 ! chondrosarcoma [Term] id: FF:0101575 name: choriocarcinoma cell line sample namespace: FANTOM5 synonym: "choriocarcinoma cell line" EXACT [] xref: BTO:0001575 is_a: FF:0100385 ! bone cancer cell line sample intersection_of: FF:0100385 ! bone cancer cell line sample intersection_of: is_model_for DOID:3594 ! choriocarcinoma relationship: derives_from CL:0000586 ! germ cell relationship: is_model_for DOID:3594 ! choriocarcinoma [Term] id: FF:0101581 name: embryonic stem cell line sample namespace: FANTOM5 synonym: "embryonic stem cell line" EXACT [] synonym: "ES cell line" RELATED [] xref: BTO:0001581 is_a: FF:0100669 ! embryonic cell line sample intersection_of: FF:0100669 ! embryonic cell line sample intersection_of: derives_from CL:0002322 ! embryonic stem cell relationship: derives_from CL:0002322 ! embryonic stem cell [Term] id: FF:0101583 name: T-98G cell sample namespace: FANTOM5 def: "Human, Caucasian, glioblastoma cell line." [HyperCLDB:http\://www.biotech.ist.unige.it/] synonym: "T-98G cell" EXACT [] synonym: "T98G cell" RELATED [] xref: BTO:0001583 is_a: FF:0101530 ! glioblastoma cell line sample [Term] id: FF:0101584 name: G-361 cell sample namespace: FANTOM5 def: "Homo sapiens (human); skin; malignant melanoma cell line; established from a 31 year old caucasian male." [ATCC_American_Cell_Type_Culture_Collection:http\://www.lgcstandards-atcc.org/] synonym: "G-361 cell" EXACT [] xref: BTO:0001584 is_a: FF:0100849 ! melanoma cell line sample [Term] id: FF:0101591 name: PA-1 cell sample namespace: FANTOM5 def: "Human ovary ascites teratocarcinoma cell line. The line was established from cells taken from ascitic fluid." [ATCC_American_Cell_Type_Culture_Collection:http\://www.lgcstandards-atcc.org/] synonym: "PA-1 cell" EXACT [] xref: BTO:0001591 is_a: FF:0100811 ! ovary cancer cell line sample [Term] id: FF:0101610 name: thyroid cancer cell line sample namespace: FANTOM5 synonym: "thyroid cancer cell line" EXACT [] xref: BTO:0001610 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:1781 ! thyroid cancer relationship: is_model_for DOID:1781 ! thyroid cancer [Term] id: FF:0101616 name: colorectal cancer cell line sample namespace: FANTOM5 synonym: "colorectal cancer cell line" EXACT [] synonym: "CRC cell line" RELATED [] xref: BTO:0001616 is_a: FF:0101533 ! gastrointestinal cancer cell sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:9256 ! colorectal cancer relationship: is_model_for DOID:9256 ! colorectal cancer [Term] id: FF:0101664 name: hepatoblastoma cell line sample namespace: FANTOM5 synonym: "hepatoblastoma cell line" EXACT [] xref: BTO:0001664 is_a: FF:0100578 ! hepatoma cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:687 ! hepatoblastoma relationship: is_model_for DOID:687 ! hepatoblastoma [Term] id: FF:0101670 name: HuH-6 cell sample namespace: FANTOM5 def: "Human hepatoblastoma cell line." [PMID:1373706] synonym: "HuH-6 cell" EXACT [] synonym: "Huh6 cell" RELATED [] xref: BTO:0001670 is_a: FF:0101664 ! hepatoblastoma cell line sample [Term] id: FF:0101874 name: lens epithelial cell line sample namespace: FANTOM5 synonym: "lens epithelial cell line" EXACT [] xref: BTO:0001874 is_a: FF:0101120 ! epithelial cell line sample intersection_of: FF:0101120 ! epithelial cell line sample intersection_of: derives_from CL:0002224 ! lens epithelial cell relationship: derives_from CL:0002224 ! lens epithelial cell [Term] id: FF:0101882 name: ovary adenocarcinoma cell line sample namespace: FANTOM5 synonym: "ovarian adenocarcinoma cell line" RELATED [] synonym: "ovary adenocarcinoma cell line" EXACT [] xref: BTO:0001882 is_a: FF:0100167 ! adenocarcinoma cell line sample is_a: FF:0100811 ! ovary cancer cell line sample intersection_of: FF:0100167 ! adenocarcinoma cell line sample intersection_of: FF:0100811 ! ovary cancer cell line sample [Term] id: FF:0101883 name: acute myeloid leukemia cell line sample namespace: FANTOM5 synonym: "acute myelocytic leukemia cell line" RELATED [] synonym: "acute myelogenous leukemia cell line" RELATED [] synonym: "acute myeloid leukemia cell line" EXACT [] xref: BTO:0001883 is_a: FF:0100740 ! myeloid leukemia cell line sample [Term] id: FF:0101908 name: MDA-MB-453 cell sample namespace: FANTOM5 def: "Human breast carcinoma cell line; established from an effusion of a 48-year-old woman with breast carcinoma in 1976." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "MDA-MB-453 cell" EXACT [] xref: BTO:0001908 is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0104086 ! mammary gland tumor cell line sample relationship: derives_from CL:0002327 ! mammary epithelial cell [Term] id: FF:0101911 name: lung adenocarcinoma cell line sample namespace: FANTOM5 synonym: "lung adenocarcinoma cell line" EXACT [] xref: BTO:0001911 is_a: FF:0100167 ! adenocarcinoma cell line sample is_a: FF:0100762 ! lung cancer cell line sample intersection_of: FF:0100167 ! adenocarcinoma cell line sample intersection_of: FF:0100762 ! lung cancer cell line sample [Term] id: FF:0101912 name: breast adenocarcinoma cell line sample namespace: FANTOM5 synonym: "breast adenocarcinoma cell line" EXACT [] xref: BTO:0001912 is_a: FF:0100167 ! adenocarcinoma cell line sample is_a: FF:0100356 ! breast cancer cell line sample intersection_of: FF:0100167 ! adenocarcinoma cell line sample intersection_of: FF:0100356 ! breast cancer cell line sample [Term] id: FF:0101913 name: colonic adenocarcinoma cell line sample namespace: FANTOM5 synonym: "colonic adenocarcinoma cell line" EXACT [] xref: BTO:0001913 is_a: FF:0101914 ! colorectal adenocarcinoma cell line sample [Term] id: FF:0101914 name: colorectal adenocarcinoma cell line sample namespace: FANTOM5 synonym: "colorectal adenocarcinoma cell line" EXACT [] xref: BTO:0001914 is_a: FF:0100167 ! adenocarcinoma cell line sample is_a: FF:0101616 ! colorectal cancer cell line sample intersection_of: FF:0100167 ! adenocarcinoma cell line sample intersection_of: FF:0101616 ! colorectal cancer cell line sample [Term] id: FF:0101952 name: HPB-ALL cell sample namespace: FANTOM5 def: "Human T cell leukemia cell line; established from the peripheral blood of a 14-year-old Japanese boy with ALL and thymoma at diagnosis in 1973." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "HPB-ALL cell" EXACT [] xref: BTO:0001952 is_a: FF:0100741 ! lymphocytic leukemia cell line sample [Term] id: FF:0101967 name: cervical cancer cell line sample namespace: FANTOM5 synonym: "cervical cancer cell line" EXACT [] synonym: "cervical carcinoma cell line" RELATED [] xref: BTO:0001967 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:4362 ! cervical cancer relationship: derives_from UBERON:0000002 ! uterine cervix relationship: is_model_for DOID:4362 ! cervical cancer [Term] id: FF:0102003 name: SW-1353 cell sample namespace: FANTOM5 def: "Human bone chondrosarcoma cell line. The SW 1353 cell line was initiated by A. Leibovitz at the Scott and White Clinic, Temple, Texas in 1977 from a primary grade II chondrosarcoma of the right humerus obtained from a 72 year old female Caucasian." [ATCC_American_Cell_Type_Culture_Collection:http\://www.lgcstandards-atcc.org/] synonym: "SW 1353 cell" RELATED [] synonym: "SW-1353 cell" EXACT [] synonym: "SW1353 cell" RELATED [] xref: BTO:0002003 is_a: FF:0101574 ! chondrosarcoma cell line sample [Term] id: FF:0102024 name: squamous cell carcinoma cell line sample namespace: FANTOM5 def: "Carcinoma developed from squamous epithelium, having cuboid cells and characterized by keratinization and often by preservation of intercellular bridges. Initially local and superficial, the lesion may later invade and metastasize." [goc:tfm] synonym: "SCC cell line" RELATED [] synonym: "squamous cell carcinoma cell line" EXACT [] xref: BTO:0002024 is_a: FF:0100297 ! carcinoma cell line sample intersection_of: FF:0100297 ! carcinoma cell line sample intersection_of: is_model_for DOID:1749 ! squamous cell carcinoma relationship: derives_from CL:0000076 ! squamous epithelial cell relationship: is_model_for DOID:1749 ! squamous cell carcinoma [Term] id: FF:0102025 name: HSC-3 cell sample namespace: FANTOM5 def: "Human oral squamous cell carcinoma cell line." [PMID:14596870] synonym: "HSC-3 cell" EXACT [] xref: BTO:0002025 is_a: FF:0102211 ! oral squamous cell carcinoma cell line sample [Term] id: FF:0102027 name: oral cancer cell line sample namespace: FANTOM5 synonym: "oral cancer cell line" EXACT [] xref: BTO:0002027 is_a: FF:0101533 ! gastrointestinal cancer cell sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:8618 ! oral cavity cancer relationship: derives_from UBERON:0003343 ! mucosa of oral region relationship: is_model_for DOID:8618 ! oral cavity cancer [Term] id: FF:0102047 name: Colo-320 cell sample namespace: FANTOM5 def: "Human colorectal cancer cell line." [PMID:14966914] synonym: "Colo-320 cell" EXACT [] xref: BTO:0002047 is_a: FF:0101913 ! colonic adenocarcinoma cell line sample [Term] id: FF:0102057 name: lung adenocarcinoma cell sample namespace: FANTOM5 def: "A type of bronchogenic carcinoma made up of cuboidal or columnar cells in a discrete mass, usually at the periphery of the lungs. Most such tumors form glandular structures containing mucin, although a minority are solid and without mucin. Growth is slow, but there may be early invasion of blood and lymph vessels, giving rise to metastases while the primary lesion is still asymptomatic." [Dorlands_Medical_Dictionary:MerckSource] synonym: "lung adenocarcinoma cell" EXACT [] synonym: "pulmonary adenocarcinoma cell" RELATED [] xref: BTO:0002057 is_a: FF:0102058 ! non-small cell lung cancer cell sample intersection_of: FF:0102058 ! non-small cell lung cancer cell sample intersection_of: is_model_for DOID:3910 ! lung adenocarcinoma relationship: is_model_for DOID:3910 ! lung adenocarcinoma [Term] id: FF:0102058 name: non-small cell lung cancer cell sample namespace: FANTOM5 def: "A general term comprising all lung carcinomas except small cell carcinoma, and including adenocarcinoma of the lung, large cell carcinoma, and squamous cell carcinoma." [Dorlands_Medical_Dictionary:MerckSource] synonym: "non-small cell carcinoma cell" RELATED [] synonym: "non-small cell lung cancer cell" EXACT [] synonym: "non-small cell lung carcinoma cell" RELATED [] synonym: "NSCLC cell" RELATED [] xref: BTO:0002058 is_a: FF:0102061 ! bronchogenic carcinoma cell sample is_a: FF:0102553 ! non-small cell lung cancer cell line sample intersection_of: FF:0102061 ! bronchogenic carcinoma cell sample intersection_of: is_model_for DOID:3908 ! non-small cell lung carcinoma relationship: is_model_for DOID:3908 ! non-small cell lung carcinoma [Term] id: FF:0102060 name: bronchioalveolar carcinoma cell sample namespace: FANTOM5 def: "A variant type of adenocarcinoma of the lung, with columnar to cuboidal epithelial cells lining the alveolar septa and projecting into alveolar spaces in branching papillary formations." [Dorlands_Medical_Dictionary:MerckSource] synonym: "alveolar adenocarcinoma cell" RELATED [] synonym: "alveolar carcinoma cell" RELATED [] synonym: "alveolar cell carcinoma cell" RELATED [] synonym: "alveolar cell tumor cell" RELATED [] synonym: "bronchioalveolar adenocarcinoma cell" RELATED [] synonym: "bronchioalveolar carcinoma cell" EXACT [] synonym: "bronchiolar adenocarcinoma cell" RELATED [] synonym: "bronchiolar carcinoma cell" RELATED [] synonym: "bronchoalveolar adenocarcinoma cell" RELATED [] synonym: "bronchoalveolar carcinoma cell" RELATED [] synonym: "bronchoalveolar cell carcinoma cell" RELATED [] xref: BTO:0002060 is_a: FF:0102057 ! lung adenocarcinoma cell sample relationship: derives_from CL:0000322 ! pneumocyte relationship: derives_from UBERON:0004821 ! pulmonary alveolus epithelium relationship: derives_from UBERON:0004903 ! bronchoalveolar duct junction [Term] id: FF:0102061 name: bronchogenic carcinoma cell sample namespace: FANTOM5 def: "Any of a large group of carcinomas of the lung, so called because they arise from the epithelium of the bronchial tree. Four primary subtypes are distinguished: adenocarcinoma of the lung, large cell carcinoma, small cell carcinoma, and squamous cell carcinoma." [Dorlands_Medical_Dictionary:MerckSource] comment: check DOID - add subtypes? synonym: "bronchogenic carcinoma cell" EXACT [] xref: BTO:0002061 is_a: FF:0100762 ! lung cancer cell line sample intersection_of: FF:0100762 ! lung cancer cell line sample intersection_of: is_model_for DOID:3904 ! bronchogenic carcinoma relationship: is_model_for DOID:3904 ! bronchogenic carcinoma [Term] id: FF:0102062 name: B-lymphoblastoid cell line sample namespace: FANTOM5 synonym: "B-lymphoblastoid cell line" EXACT [] xref: BTO:0002062 is_a: FF:0100773 ! lymphoblastoid cell line sample is_a: FF:0101522 ! B-lymphocyte cell line sample intersection_of: FF:0100773 ! lymphoblastoid cell line sample intersection_of: FF:0101522 ! B-lymphocyte cell line sample [Term] id: FF:0102144 name: acute lymphoblastic leukemia cell line sample namespace: FANTOM5 def: "Lymphocytic leukemia cell line that is marked by an abnormal increase in the number of lymphoblasts, that is characterized by rapid onset and progression of symptoms which include fever, anemia, pallor, fatigue, appetite loss, bleeding, thrombocytopenia, granulocytopenia, bone and joint pain, and enlargement of the lymph nodes, liver, and spleen, and that occurs chiefly during childhood." [Fast_Health_Medical_Dictionary:http\://www.fasthealth.com/dictionary/] synonym: "acute lymphoblastic leukemia cell line" EXACT [] synonym: "ALL cell line" RELATED [] xref: BTO:0002144 is_a: FF:0100739 ! lymphoblastic leukemia cell line sample [Term] id: FF:0102202 name: lung squamous cell carcinoma cell line sample namespace: FANTOM5 synonym: "lung squamous cell carcinoma cell line" EXACT [] xref: BTO:0002202 is_a: FF:0100762 ! lung cancer cell line sample is_a: FF:0102024 ! squamous cell carcinoma cell line sample intersection_of: FF:0100762 ! lung cancer cell line sample intersection_of: FF:0102024 ! squamous cell carcinoma cell line sample [Term] id: FF:0102205 name: large cell lung cancer cell line sample namespace: FANTOM5 synonym: "large cell carcinoma cell line" RELATED [] synonym: "large cell lung cancer cell line" EXACT [] xref: BTO:0002205 is_a: FF:0102553 ! non-small cell lung cancer cell line sample intersection_of: FF:0100762 ! lung cancer cell line sample intersection_of: is_model_for DOID:4556 ! lung large cell carcinoma relationship: is_model_for DOID:4556 ! lung large cell carcinoma [Term] id: FF:0102206 name: small cell lung cancer cell line sample namespace: FANTOM5 synonym: "small cell lung cancer cell line" EXACT [] xref: BTO:0002206 is_a: FF:0100762 ! lung cancer cell line sample intersection_of: FF:0100762 ! lung cancer cell line sample intersection_of: is_model_for DOID:5409 ! lung small cell carcinoma relationship: is_model_for DOID:5409 ! lung small cell carcinoma [Term] id: FF:0102207 name: NCI-H460 cell sample namespace: FANTOM5 synonym: "H-460 cell" RELATED [] synonym: "H460 cell" RELATED [] synonym: "NCI-H460 cell" EXACT [] xref: BTO:0002207 is_a: FF:0102205 ! large cell lung cancer cell line sample [Term] id: FF:0102211 name: oral squamous cell carcinoma cell line sample namespace: FANTOM5 synonym: "oral squamous cell carcinoma cell line" EXACT [] synonym: "OSCC cell line" RELATED [] xref: BTO:0002211 is_a: FF:0102027 ! oral cancer cell line sample is_a: FF:0102709 ! head and neck squamous cell carcinoma cell line sample intersection_of: FF:0102027 ! oral cancer cell line sample intersection_of: FF:0102709 ! head and neck squamous cell carcinoma cell line sample relationship: derives_from CL:0002251 ! epithelial cell of alimentary canal [Term] id: FF:0102267 name: rhabdomyosarcoma cell line sample namespace: FANTOM5 def: "A sarcoma (from the Greek 'sarx' meaning flesh) is a cancer that arises from transformed connective tissue cells. These cells originate from embryonic mesoderm, or middle layer,[2] which forms the bone, cartilage, and fat tissues. This is in contrast to carcinomas, which originate in the epithelium. The epithelium lines the surface of structures throughout the body, and is the origin of cancers in the breast, colon, pancreas. However, due to an evolving understanding of tissue origin, the term sarcoma is sometimes applied to tumors now known to arise from epithelial tissue. The term soft tissue sarcoma is used to describe tumors of soft tissue, which includes elements that are in connective tissue, but not derived from it (such as muscles and blood vessels)." [http://en.wikipedia.org/wiki/Sarcoma#cite_note-pmid17433623-2] synonym: "rhabdomyosarcoma cell line" EXACT [] xref: BTO:0002267 is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0100400 ! sarcoma cell line sample intersection_of: FF:0100297 ! carcinoma cell line sample intersection_of: is_model_for DOID:3247 ! rhabdomyosarcoma relationship: is_model_for DOID:3247 ! rhabdomyosarcoma [Term] id: FF:0102285 name: granulosa cell line sample namespace: FANTOM5 synonym: "granulosa cell line" EXACT [] synonym: "primary granulosa cell line" RELATED [] xref: BTO:0002285 is_a: FF:0101120 ! epithelial cell line sample relationship: derives_from CL:0000501 ! granulosa cell relationship: is_model_for DOID:193 ! reproductive organ cancer [Term] id: FF:0102332 name: monocytic leukemia cell line sample namespace: FANTOM5 synonym: "monocytic leukemia cell line" EXACT [] xref: BTO:0002332 is_a: FF:0100740 ! myeloid leukemia cell line sample relationship: derives_from CL:0000576 ! monocyte [Term] id: FF:0102380 name: gastric adenocarcinoma cell line sample namespace: FANTOM5 synonym: "gastric adenocarcinoma cell line" EXACT [] xref: BTO:0002380 is_a: FF:0100167 ! adenocarcinoma cell line sample is_a: FF:0100787 ! gastric cancer cell line sample intersection_of: FF:0100167 ! adenocarcinoma cell line sample intersection_of: is_model_for DOID:3717 ! gastric adenocarcinoma relationship: derives_from CL:0002178 ! epithelial cell of stomach relationship: is_model_for DOID:3717 ! gastric adenocarcinoma [Term] id: FF:0102384 name: MKN-1 cell sample namespace: FANTOM5 def: "Human gastric adenosquamous carcinoma cell line." [PMID:10073143] synonym: "MKN-1 cell" EXACT [] synonym: "MKN1 cell" RELATED [] xref: BTO:0002384 is_a: FF:0102380 ! gastric adenocarcinoma cell line sample [Term] id: FF:0102403 name: OS-RC-2 cell sample namespace: FANTOM5 def: "Human renal cell carcinoma (RCC) cell line." [PMID:11690551] synonym: "OS-RC-2 cell" EXACT [] xref: BTO:0002403 is_a: FF:0100383 ! renal cell carcinoma cell line sample [Term] id: FF:0102411 name: giant cell carcinoma cell line sample namespace: FANTOM5 def: "A large undifferentiated carcinoma with a poor prognosis. A different cell type frm giant cell tumor cell line." [http://www.chemo.net/large.htm] synonym: "giant cell carcinoma cell line" EXACT [] xref: BTO:0002411 is_a: FF:0100297 ! carcinoma cell line sample [Term] id: FF:0102424 name: mesothelioma cell line sample namespace: FANTOM5 synonym: "mesothelioma cell line" EXACT [] xref: BTO:0002424 is_a: FF:0101120 ! epithelial cell line sample relationship: derives_from CL:0000077 ! mesothelial cell relationship: is_model_for DOID:162 ! cancer [Term] id: FF:0102504 name: T-lymphoblastic leukemia cell line sample namespace: FANTOM5 synonym: "T-lymphoblastic leukemia cell line" EXACT [] xref: BTO:0002504 is_a: FF:0100739 ! lymphoblastic leukemia cell line sample relationship: derives_from CL:0000084 ! T cell [Term] id: FF:0102521 name: diffuse large B-cell lymphoma cell sample namespace: FANTOM5 def: "Diffuse large B-cell lymphoma is a common type of non-Hodgkin lymphoma (NHL) accounting for about 2 in 5 of all cases. It is a cancer of the B-lymphocytes. Diffuse B-cell lymphoma can occur at any time between adolescence and old age. It is slightly more common in men than in women." [Cancerbackup.org:http\://www.cancerbackup.org.uk/Cancertype/Lymphomanon-Hodgkin/TypesofNHL/DiffuselargeB-cell] synonym: "diffuse large B-cell lymphoma cell" EXACT [] xref: BTO:0002521 is_a: FF:0101518 ! B-lymphoma cell line sample relationship: is_model_for DOID:8675 ! lymphosarcoma [Term] id: FF:0102553 name: non-small cell lung cancer cell line sample namespace: FANTOM5 synonym: "non small cell lung cancer cell line" RELATED [] synonym: "non-small cell lung cancer cell line" EXACT [] synonym: "NSCLC cell line" RELATED [] xref: BTO:0002553 is_a: FF:0100762 ! lung cancer cell line sample intersection_of: FF:0100762 ! lung cancer cell line sample intersection_of: is_model_for DOID:3908 ! non-small cell lung carcinoma relationship: is_model_for DOID:3908 ! non-small cell lung carcinoma [Term] id: FF:0102580 name: chronic myeloid leukemia cell line sample namespace: FANTOM5 synonym: "chronic myeloid leukemia cell line" EXACT [] xref: BTO:0002580 is_a: FF:0100740 ! myeloid leukemia cell line sample intersection_of: FF:0100740 ! myeloid leukemia cell line sample intersection_of: is_model_for DOID:1036 ! chronic leukemia relationship: is_model_for DOID:1036 ! chronic leukemia [Term] id: FF:0102581 name: MEG-01 cell sample namespace: FANTOM5 def: "Human chronic myeloid leukemia in megakaryocytic blast crisis established from the bone marrow of a 55-year-old man with chronic myeloid leukemia (CML) in megakaryocytic blast crisis in 1983." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "MEG-01 cell" EXACT [] xref: BTO:0002581 is_a: FF:0102580 ! chronic myeloid leukemia cell line sample [Term] id: FF:0102586 name: G-401 cell sample namespace: FANTOM5 def: "Human caucasian kidney cell line. G-401 was deposited as a cell line derived from a Wilms' tumor. Due to a change in the classification of such tumors, the cell line was examined by Garvin et al. and found to be more appropriately classified as derived from a rhabdoid tumor of the kidney." [ATCC_American_Cell_Type_Culture_Collection:http\://www.lgcstandards-atcc.org/] synonym: "G 401 cell" RELATED [] synonym: "G-401 cell" EXACT [] synonym: "G401 cell" RELATED [] xref: BTO:0002586 is_a: FF:0103192 ! renal cancer cell line sample [Term] id: FF:0102595 name: leiomyosarcoma cell line sample namespace: FANTOM5 synonym: "leiomyosarcoma cell line" EXACT [] xref: BTO:0002595 is_a: FF:0100400 ! sarcoma cell line sample intersection_of: FF:0100400 ! sarcoma cell line sample intersection_of: is_model_for DOID:1967 ! leiomyosarcoma relationship: is_model_for DOID:1967 ! leiomyosarcoma [Term] id: FF:0102694 name: leiomyoma cell sample namespace: FANTOM5 def: "A benign tumor derived from smooth muscle, most commonly of the uterus." [Dorlands_Medical_Dictionary:MerckSource] synonym: "fibroid cell" RELATED [] synonym: "fibroid tumor cell" RELATED [] synonym: "leiomyoma cell" EXACT [] xref: BTO:0002694 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:127 ! leiomyoma relationship: derives_from UBERON:0000995 ! uterus relationship: is_model_for DOID:127 ! leiomyoma [Term] id: FF:0102709 name: head and neck squamous cell carcinoma cell line sample namespace: FANTOM5 def: "Head and neck squamous cell carcinoma." [PMID:16543918] synonym: "head and neck squamous cell carcinoma cell line" EXACT [] synonym: "HNSCC cell" RELATED [] synonym: "neck squamous cell carcinoma cell line" RELATED [] xref: BTO:0002709 is_a: FF:0102024 ! squamous cell carcinoma cell line sample relationship: derives_from UBERON:0007811 ! craniocervical region relationship: is_model_for DOID:7 ! disease of anatomical entity [Term] id: FF:0102733 name: embryonic kidney cell line sample namespace: FANTOM5 synonym: "embryonic kidney cell line" EXACT [] xref: BTO:0002733 is_a: FF:0100067 ! kidney cell line sample is_a: FF:0100669 ! embryonic cell line sample intersection_of: FF:0100669 ! embryonic cell line sample intersection_of: derives_from UBERON:0002113 ! kidney relationship: derives_from UBERON:0002113 ! kidney [Term] id: FF:0102787 name: clear cell adenocarcinoma cell sample namespace: FANTOM5 def: "A rare malignant tumor of the female genital tract, resembling a renal cell carcinoma and containing tubules or small cysts with some cells that are hobnail-shaped and others whose cytoplasm is clear, containing abundant glycogen and inconspicuous stroma. It may occur in the ovary, uterus, cervix, or vagina." [Dorlands_Medical_Dictionary:MerckSource] synonym: "clear cell adenocarcinoma cell" EXACT [] synonym: "clear cell carcinoma cell" RELATED [] synonym: "mesonephroma cell" RELATED [] xref: BTO:0002787 is_a: FF:0100167 ! adenocarcinoma cell line sample intersection_of: FF:0100167 ! adenocarcinoma cell line sample intersection_of: is_model_for DOID:4468 ! clear cell adenocarcinoma relationship: is_model_for DOID:4468 ! clear cell adenocarcinoma [Term] id: FF:0102788 name: mucinous adenocarcinoma cell sample namespace: FANTOM5 def: "An adenocarcinoma that produces mucin in significant amounts." [Dorlands_Medical_Dictionary:MerckSource] synonym: "carcinoma mucosum" RELATED [] synonym: "colloid cancer cell" RELATED [] synonym: "colloid carcinoma cell" RELATED [] synonym: "gelatinous carcinoma cell" RELATED [] synonym: "mucinous adenocarcinoma cell" EXACT [] synonym: "mucinus cancer cell" RELATED [] synonym: "mucous cancer cell" RELATED [] synonym: "mucous carcinoma cell" RELATED [] xref: BTO:0002788 is_a: FF:0100167 ! adenocarcinoma cell line sample intersection_of: FF:0100167 ! adenocarcinoma cell line sample intersection_of: is_model_for DOID:3030 ! mucinous adenocarcinoma relationship: derives_from CL:0000319 ! mucus secreting cell relationship: is_model_for DOID:3030 ! mucinous adenocarcinoma [Term] id: FF:0102835 name: NCI-H358 cell sample namespace: FANTOM5 def: "Human non-small cell lung cancer cell line; established from bronchioalvealoar carcinoma of lung." [ATCC_American_Cell_Type_Culture_Collection:http\://www.lgcstandards-atcc.org/] synonym: "H-358 cell" RELATED [] synonym: "H358 cell" RELATED [] synonym: "NCI-H358 cell" EXACT [] xref: BTO:0002835 is_a: FF:0102553 ! non-small cell lung cancer cell line sample [Term] id: FF:0102842 name: cholangioma cell sample namespace: FANTOM5 def: "A rare type of hepatocellular carcinoma arising from the cholangioles, composed of tumor cells resembling the epithelial cells of the cholangioles arranged in cords consisting of two layers of cells surrounding a minute lumen." [Dorlands_Medical_Dictionary:MerckSource] synonym: "bile duct carcinoma cell" RELATED [] synonym: "cholangiocellular carcinoma cell" RELATED [] synonym: "cholangioma cell" EXACT [] synonym: "extrahepatic bile duct carcinoma cell" RELATED [] xref: BTO:0002842 is_a: FF:0100578 ! hepatoma cell line sample relationship: derives_from UBERON:0001282 ! intralobular bile duct [Term] id: FF:0102868 name: bladder transitional cell carcinoma cell line sample namespace: FANTOM5 synonym: "bladder transitional cell carcinoma cell line" EXACT [] xref: BTO:0002868 is_a: FF:0100792 ! urinary bladder cancer cell line sample is_a: FF:0102869 ! transitional cell carcinoma cell line sample intersection_of: FF:0100792 ! urinary bladder cancer cell line sample intersection_of: FF:0102869 ! transitional cell carcinoma cell line sample relationship: derives_from CL:1001319 ! bladder cell [Term] id: FF:0102869 name: transitional cell carcinoma cell line sample namespace: FANTOM5 synonym: "transitional cell carcinoma cell line" EXACT [] xref: BTO:0002869 is_a: FF:0100297 ! carcinoma cell line sample intersection_of: FF:0100297 ! carcinoma cell line sample intersection_of: derives_from UBERON:0005910 ! transitional epithelium relationship: derives_from UBERON:0005910 ! transitional epithelium [Term] id: FF:0102877 name: PC-14 cell sample namespace: FANTOM5 def: "Human lung adenocarcinoma cell line." [PMID:15746434] synonym: "PC-14 cell" EXACT [] synonym: "PC14 cell" RELATED [] xref: BTO:0002877 is_a: FF:0101911 ! lung adenocarcinoma cell line sample [Term] id: FF:0102912 name: neuroepithelioma cell line sample namespace: FANTOM5 synonym: "neuroepithelioma cell line" EXACT [] xref: BTO:0002912 is_a: FF:0000003 ! cell line sample relationship: derives_from UBERON:0003714 ! neural tissue relationship: is_model_for DOID:3093 ! nervous system cancer [Term] id: FF:0102914 name: SK-N-MC cell sample namespace: FANTOM5 def: "Human neuroblastoma cell line; established from the supraorbital metastasis of a neuroblastoma of a 14-year-old girl in 1971; although described in the original paper as neuroblastoma, SK-N-MC is now widely regarded as having originated from the morphologically similar Askin's tumor related to Ewing's sarcoma." [ATCC_American_Cell_Type_Culture_Collection:http\://www.lgcstandards-atcc.org/, Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "SK-N-MC cell" EXACT [] xref: BTO:0002914 is_a: FF:0100932 ! neuroblastoma cell line sample is_a: FF:0102912 ! neuroepithelioma cell line sample is_a: FF:0104785 ! Ewing's sarcoma family tumor cell line sample [Term] id: FF:0102919 name: retinoblastoma cell line sample namespace: FANTOM5 synonym: "retinoblastoma cell line" EXACT [] xref: BTO:0002919 is_a: FF:0100711 ! glioma cell line sample intersection_of: FF:0100711 ! glioma cell line sample intersection_of: is_model_for DOID:768 ! retinoblastoma relationship: derives_from UBERON:0000966 ! retina relationship: is_model_for DOID:768 ! retinoblastoma [Term] id: FF:0102920 name: Y-79 cell sample namespace: FANTOM5 def: "Human retinoblastoma cell line; established from the primary tumor (right eye) of a 2-year-old Caucasian girl in 1971." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "Y-79 cell" EXACT [] synonym: "Y79 cell" RELATED [] xref: BTO:0002920 is_a: FF:0102919 ! retinoblastoma cell line sample [Term] id: FF:0102989 name: CHP-134 cell sample namespace: FANTOM5 def: "A neuroblastoma cell line established from a tumour of the left adrenal area of an 18-month-old male patient." [European_collection_of_cell_cultures:ECACC] synonym: "CHP-134 cell" EXACT [] synonym: "CHP134 cell" RELATED [] xref: BTO:0002989 is_a: FF:0100932 ! neuroblastoma cell line sample [Term] id: FF:0102992 name: ARH-77 cell sample namespace: FANTOM5 def: "Human plasma cell leukemia cell line, established from the peripheral blood of a 33-year-old woman with IgG plasma cell leukemia; cell line is widely used as model for multiple myeloma/plasma cell leukemia, but cells are clearly EBV+ indicating that ARH-77 might be rather a normal B-lymphoblastoid cell line than a tumor cell line." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "ARH-77 cell" EXACT [] synonym: "ARH77 cell" RELATED [] xref: BTO:0002992 is_a: FF:0102062 ! B-lymphoblastoid cell line sample [Term] id: FF:0103001 name: EBC-1 cell sample namespace: FANTOM5 def: "Human lung squamous cell carcinoma cell line; established from a 68 year old male." [Cell_Name_Index:http\://www.jhsf.or.jp/bank/CellName.html] synonym: "EBC-1 cell" EXACT [] synonym: "EBC1 cell" RELATED [] xref: BTO:0003001 is_a: FF:0102202 ! lung squamous cell carcinoma cell line sample [Term] id: FF:0103008 name: NCI-H226 cell sample namespace: FANTOM5 def: "Non-small cell lung cancer cell line." [PMID:11595720] synonym: "H-226 cell" RELATED [] synonym: "H226 cell" RELATED [] synonym: "NCI-H226 cell" EXACT [] xref: BTO:0003008 is_a: FF:0102553 ! non-small cell lung cancer cell line sample [Term] id: FF:0103026 name: NCI-H82 cell sample namespace: FANTOM5 def: "Small cell lung cancer cell line." [PMID:11595720] synonym: "H-82 cell" RELATED [] synonym: "H82 cell" RELATED [] synonym: "NCI-H82 cell" EXACT [] xref: BTO:0003026 is_a: FF:0102206 ! small cell lung cancer cell line sample [Term] id: FF:0103046 name: neurofibroma cell sample namespace: FANTOM5 def: "A usually benign tumor of peripheral nerves caused by abnormal proliferation of Schwann cells." [Dorlands_Medical_Dictionary:MerckSource] synonym: "fibroneuroma cell" RELATED [] synonym: "neurofibroma cell" EXACT [] xref: BTO:0003046 is_a: FF:0103225 ! neurilemoma cell line sample intersection_of: FF:0103225 ! neurilemoma cell line sample intersection_of: is_model_for DOID:962 ! neurofibroma relationship: is_model_for DOID:962 ! neurofibroma [Term] id: FF:0103071 name: HLEC-SRA 01/04 cell sample namespace: FANTOM5 def: "Human lens epithelial cell line." [PMID:15199188] synonym: "HLE-SRA-01/04 cell" RELATED [] synonym: "HLEC SRA 01/04 cell" RELATED [] synonym: "HLEC-SRA 01/04 cell" EXACT [] synonym: "SRA 01/04 cell" RELATED [] synonym: "SRA01/04 cell" RELATED [] xref: BTO:0003071 is_a: FF:0101874 ! lens epithelial cell line sample [Term] id: FF:0103073 name: medullary thyroid carcinoma cell line sample namespace: FANTOM5 synonym: "medullary thyroid carcinoma cell line" EXACT [] xref: BTO:0003073 is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0101610 ! thyroid cancer cell line sample intersection_of: FF:0100297 ! carcinoma cell line sample intersection_of: FF:0101610 ! thyroid cancer cell line sample [Term] id: FF:0103109 name: CaSki cell sample namespace: FANTOM5 def: "Human cervical carcinoma cell line; established from a 40 years old caucasian female." [HyperCLDB:http\://www.biotech.ist.unige.it/] synonym: "Ca Ski cell" RELATED [] synonym: "CaSki cell" EXACT [] xref: BTO:0003109 is_a: FF:0101967 ! cervical cancer cell line sample [Term] id: FF:0103137 name: 5637 cell sample namespace: FANTOM5 def: "Human urinary bladder carcinoma cell line; established from the primary bladder carcinoma of a 68-year-old man in 1974." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "5637 cell" EXACT [] xref: BTO:0003137 is_a: FF:0102868 ! bladder transitional cell carcinoma cell line sample [Term] id: FF:0103191 name: SNU-387 cell sample namespace: FANTOM5 def: "Human hepatocellular carcinoma cell line." [PMID:17657173] synonym: "SNU-387 cell" EXACT [] synonym: "SNU387 cell" RELATED [] xref: BTO:0003191 is_a: FF:0100578 ! hepatoma cell line sample [Term] id: FF:0103192 name: renal cancer cell line sample namespace: FANTOM5 synonym: "kidney cancer cell line" RELATED [] synonym: "renal cancer cell line" EXACT [] xref: BTO:0003192 is_a: FF:0100067 ! kidney cell line sample intersection_of: FF:0100067 ! kidney cell line sample intersection_of: is_model_for DOID:263 ! kidney cancer relationship: is_model_for DOID:263 ! kidney cancer [Term] id: FF:0103209 name: anaplastic thyroid cancer cell line sample namespace: FANTOM5 def: "Cells to a more primitive or undifferentiated form of thyroid cancer." [From_Merriam-Websters_Online_Dictionary_at_www.Merriam-Webster.com:http\://www.merriam-webster.com/dictionary/anaplasia] synonym: "anaplastic thyroid cancer cell line" EXACT [] xref: BTO:0003209 is_a: FF:0103073 ! medullary thyroid carcinoma cell line sample relationship: is_model_for DOID:7 ! disease of anatomical entity [Term] id: FF:0103212 name: T-lymphoma cell line sample namespace: FANTOM5 synonym: "T-cell lymphoma cell line" RELATED [] synonym: "T-lymphoma cell line" EXACT [] xref: BTO:0003212 is_a: FF:0100104 ! lymphoma cell line sample is_a: FF:0101035 ! hematopoietic cell line sample intersection_of: FF:0100104 ! lymphoma cell line sample intersection_of: derives_from CL:0000084 ! T cell relationship: derives_from CL:0000084 ! T cell [Term] id: FF:0103225 name: neurilemoma cell line sample namespace: FANTOM5 synonym: "neurilemoma cell line" EXACT [] synonym: "schwannoma cell line" RELATED [] xref: BTO:0003225 is_a: FF:0000003 ! cell line sample relationship: derives_from CL:0002573 ! Schwann cell relationship: is_model_for DOID:14566 ! disease of cellular proliferation [Term] id: FF:0103288 name: NALM-6 cell sample namespace: FANTOM5 def: "Human B cell precursor leukemia cell line; established from the peripheral blood of a 19-year-old man with acute lymphoblastic leukemia (ALL) in relapse in 1976." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "NALM-6 cell" EXACT [] synonym: "NALM6 cell" RELATED [] xref: BTO:0003288 is_a: FF:0100603 ! pre-B acute lymphoblastic leukemia cell line sample [Term] id: FF:0103296 name: bone marrow stromal cell line sample namespace: FANTOM5 synonym: "bone marrow stromal cell line" EXACT [] xref: BTO:0003296 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from UBERON:0007195 ! stroma of bone marrow relationship: derives_from UBERON:0007195 ! stroma of bone marrow [Term] id: FF:0103493 name: SUIT-2 cell sample namespace: FANTOM5 def: "Human pancreatic cancer cell line." [PMID:18717994] synonym: "SUIT-2 cell" EXACT [] synonym: "Suit-2 cell" RELATED [] xref: BTO:0003493 is_a: FF:0100794 ! pancreatic cancer cell line sample [Term] id: FF:0103505 name: T-cell chronic lymphocytic leukemia cell sample namespace: FANTOM5 def: "2-5% of all chronic lymphoproliferative disorders in the West, and 5-6% in the Chinese population. Large granular lymphocytes (LGLs) with the nucleus of a small lymphocyte but abundant cytoplasm and fine or coarse azurophilic granules; ultrastructural examination may reveal characteristic parallel tubular arrays; the LGLs are often >2x109/L." [Atlas_of_Genetics_and_Cytogenetics_in_Oncology_and_Haematology:http\://atlasgeneticsoncology.org/] synonym: "large granular lymphocytosis cell" RELATED [] synonym: "T-cell chronic lymphocytic leukemia cell" EXACT [] synonym: "T-cell large granular lymphocytic leukemia cell" RELATED [] synonym: "T-LGL cell" RELATED [] synonym: "Tgamma lymphoproliferative disorder cell" RELATED [] xref: BTO:0003505 is_a: FF:0100737 ! leukemia cell line sample relationship: derives_from CL:0000084 ! T cell relationship: is_model_for DOID:1036 ! chronic leukemia [Term] id: FF:0103513 name: hepatic stellate cell line sample namespace: FANTOM5 comment: NOT a subclass of CL:0000091 Kupffer cell synonym: "hepatic stellate cell line" EXACT [] xref: BTO:0003513 is_a: FF:0100224 ! liver cell line sample is_a: FF:0100453 ! fibroblast cell line sample intersection_of: FF:0100224 ! liver cell line sample intersection_of: derives_from CL:0000632 ! hepatic stellate cell relationship: derives_from CL:0000632 ! hepatic stellate cell [Term] id: FF:0103519 name: LI90 cell sample namespace: FANTOM5 def: "Immortalized human hepatic stellate cell line." [PMID:17760834] synonym: "LI 90 cell" RELATED [] synonym: "LI90 cell" EXACT [] xref: BTO:0003519 is_a: FF:0103513 ! hepatic stellate cell line sample [Term] id: FF:0103533 name: NOR-P1 cell sample namespace: FANTOM5 def: "Human cell line derived from pancreatic cancer." [RIKEN_BioResource_Center:http\://www2.brc.riken.jp/] synonym: "NOR-P1 cell" EXACT [] xref: BTO:0003533 is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0100794 ! pancreatic cancer cell line sample relationship: derives_from CL:0000083 ! epithelial cell of pancreas [Term] id: FF:0103568 name: mammary gland cell line sample namespace: FANTOM5 synonym: "mammary gland cell line" EXACT [] xref: BTO:0003568 is_a: FF:0100816 ! breast cell line sample intersection_of: FF:0100816 ! breast cell line sample intersection_of: derives_from UBERON:0001911 ! mammary gland relationship: derives_from UBERON:0001911 ! mammary gland [Term] id: FF:0103681 name: hairy cell leukemia cell line sample namespace: FANTOM5 def: "A form of chronic leukemia marked by splenomegaly and the large, mononuclear, villus-covered cells called hairy cells in the bone marrow, spleen, liver, and peripheral blood." [Dorlands_Medical_Dictionary:MerckMedicus] synonym: "hairy cell leukemia cell line" EXACT [] xref: BTO:0003681 is_a: FF:0100737 ! leukemia cell line sample intersection_of: FF:0100737 ! leukemia cell line sample intersection_of: is_model_for DOID:285 ! hairy cell leukemia relationship: is_model_for DOID:285 ! hairy cell leukemia [Term] id: FF:0103732 name: TUHR-10TKB cell sample namespace: FANTOM5 def: "Human renal cell carcinoma (RCC) cell line, obtained by primary culturing of a clear cell carcinoma." [PMID:17284252] synonym: "TUHR-10TKB cell" EXACT [] synonym: "TUHR10TKB cell" RELATED [] xref: BTO:0003732 is_a: FF:0100383 ! renal cell carcinoma cell line sample [Term] id: FF:0103743 name: SW-872 cell sample namespace: FANTOM5 def: "The SW 872 cell line was initiated in 1974 surgical specimen of a fibrosarcoma removed from a 36 year old male Caucasian. The histopathology evaluation reported an undifferentiated malignant tumor consistent with liposarcoma." [ATCC_American_Cell_Type_Culture_Collection:http\://www.lgcstandards-atcc.org/] synonym: "SW 872 cell" RELATED [] synonym: "SW-872 cell" EXACT [] synonym: "SW872 cell" RELATED [] xref: BTO:0003743 is_a: FF:0103744 ! liposarcoma cell line sample [Term] id: FF:0103744 name: liposarcoma cell line sample namespace: FANTOM5 def: "Cell line of a malignant tumor that arises in fat cells in deep soft tissue, such as that inside the thigh. Most frequent in middle-aged and older adults (age 40 and above), liposarcomas are the most common of all soft-tissue sarcomas." [Medical_Dictionary:http\://www.medterms.com/] synonym: "liposarcoma cell line" EXACT [] xref: BTO:0003744 is_a: FF:0100400 ! sarcoma cell line sample intersection_of: FF:0100400 ! sarcoma cell line sample intersection_of: is_model_for DOID:3382 ! liposarcoma relationship: is_model_for DOID:3382 ! liposarcoma [Term] id: FF:0103764 name: NCI cell sample namespace: FANTOM5 def: "Human fibrosarcoma cell line." [PMID:18319331] synonym: "NCI cell" EXACT [] xref: BTO:0003764 is_a: FF:0100460 ! fibrosarcoma cell line sample [Term] id: FF:0103766 name: giant cell tumor cell line sample namespace: FANTOM5 def: "Human fibrous histiocytoma cell line, established from a 29 years old male." [ATCC_American_Cell_Type_Culture_Collection:http\://www.lgcstandards-atcc.org/] synonym: "GCT cell" RELATED [] synonym: "giant cell tumor cell line" EXACT [] xref: BTO:0003766 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:200 ! giant cell tumor relationship: is_model_for DOID:200 ! giant cell tumor [Term] id: FF:0103803 name: serous adenocarcinoma cell line sample namespace: FANTOM5 synonym: "serous adenocarcinoma cell line" EXACT [] xref: BTO:0003803 is_a: FF:0100658 ! uterine adenocarcinoma cell sample is_a: FF:0101555 ! endometrial cancer cell line sample [Term] id: FF:0103910 name: bile duct cancer cell line sample namespace: FANTOM5 synonym: "bile duct cancer cell line" EXACT [] synonym: "biliary duct cancer cell line" RELATED [] xref: BTO:0003910 is_a: FF:0000003 ! cell line sample relationship: derives_from UBERON:0002394 ! bile duct relationship: is_model_for DOID:7 ! disease of anatomical entity [Term] id: FF:0103911 name: HuCCT-1 cell sample namespace: FANTOM5 def: "Human liver bile duct carcinoma cell line." [Japanese_Collection_of_Research_Bioresources:http\://cellbank.nibio.go.jp/] synonym: "HuCCT-1 cell" EXACT [] synonym: "HuCCT1 cell" RELATED [] xref: BTO:0003911 is_a: FF:0103910 ! bile duct cancer cell line sample [Term] id: FF:0103980 name: tongue squamous cell carcinoma cell line sample namespace: FANTOM5 synonym: "tongue squamous cell carcinoma cell line" EXACT [] xref: BTO:0003980 is_a: FF:0100786 ! tongue cancer cell line sample is_a: FF:0102211 ! oral squamous cell carcinoma cell line sample intersection_of: FF:0100786 ! tongue cancer cell line sample intersection_of: FF:0102211 ! oral squamous cell carcinoma cell line sample [Term] id: FF:0103981 name: SAS cell sample namespace: FANTOM5 def: "Human tongue squamous carcinoma cell line." [Japanese_Collection_of_Research_Bioresources:http\://cellbank.nibio.go.jp/] synonym: "SAS cell" EXACT [] xref: BTO:0003981 is_a: FF:0103980 ! tongue squamous cell carcinoma cell line sample [Term] id: FF:0104049 name: adult T-cell lymphoma cell line sample namespace: FANTOM5 synonym: "adult T-cell leukemia cell line" RELATED [] synonym: "adult T-cell lymphoma cell line" EXACT [] synonym: "ATL cell line" RELATED [] xref: BTO:0004049 is_a: FF:0100737 ! leukemia cell line sample is_a: FF:0103212 ! T-lymphoma cell line sample [Term] id: FF:0104053 name: umbilical cord blood sample namespace: FANTOM5 def: "Blood from the umbilical cord of a newborn baby. This blood contains high concentrations of stem cells." [Dictionary_of_Cancer_Terms:http\://www.cancer.gov/] synonym: "cord blood" RELATED [] synonym: "umbilical cord blood" EXACT [] xref: BTO:0004053 is_a: FF:0100669 ! embryonic cell line sample is_a: FF:0101035 ! hematopoietic cell line sample intersection_of: FF:0101035 ! hematopoietic cell line sample intersection_of: derives_from UBERON:0012168 ! umbilical cord blood relationship: derives_from UBERON:0012168 ! umbilical cord blood [Term] id: FF:0104078 name: non-small cell lung adenocarcinoma cell line sample namespace: FANTOM5 synonym: "non-small cell lung adenocarcinoma cell line" EXACT [] xref: BTO:0004078 is_a: FF:0102553 ! non-small cell lung cancer cell line sample [Term] id: FF:0104086 name: mammary gland tumor cell line sample namespace: FANTOM5 synonym: "mammary gland tumor cell line" EXACT [] synonym: "mammary tumor cell line" RELATED [] xref: BTO:0004086 is_a: FF:0100356 ! breast cancer cell line sample is_a: FF:0103568 ! mammary gland cell line sample [Term] id: FF:0104137 name: KCL-22 cell sample namespace: FANTOM5 def: "A Philadelphia chromosome-positive cell line established from peripheral blood of a patient with chronic myelogenous leukemia in blast crisis" [PMID:12743326] synonym: "KCL-22 cell" EXACT [] synonym: "KCL22 cell" RELATED [] xref: BTO:0004137 is_a: FF:0102580 ! chronic myeloid leukemia cell line sample [Term] id: FF:0104201 name: Ewing's sarcoma cell line sample namespace: FANTOM5 def: "A malignant primary bone tumour that arises most commonly in the first three decades of life." [Biology-Online_Dictionary:http\://www.biology-online.org/dictionary/] synonym: "Ewing's sarcoma cell line" EXACT [] synonym: "EWS cell line" RELATED [] xref: BTO:0004201 is_a: FF:0104785 ! Ewing's sarcoma family tumor cell line sample [Term] id: FF:0104204 name: nasal squamous cell carcinoma cell line sample namespace: FANTOM5 synonym: "nasal squamous cell carcinoma cell line" EXACT [] xref: BTO:0004204 is_a: FF:0102024 ! squamous cell carcinoma cell line sample [Term] id: FF:0104205 name: RPMI-2650 cell sample namespace: FANTOM5 def: "Human nasal septum squamous cell carinoma cell line; established from the pleural effusion of a 52-year-old man with anaplastic squamous cell carcinoma of the nasal septum in 1962." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "RPMI 2650 cell" RELATED [] synonym: "RPMI-2650 cell" EXACT [] synonym: "RPMI2650 cell" RELATED [] xref: BTO:0004205 is_a: FF:0104204 ! nasal squamous cell carcinoma cell line sample [Term] id: FF:0104398 name: meningioma cell line sample namespace: FANTOM5 synonym: "meningioma cell line" EXACT [] xref: BTO:0004398 is_a: FF:0000003 ! cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: is_model_for DOID:3565 ! meningioma relationship: is_model_for DOID:3565 ! meningioma [Term] id: FF:0104511 name: serous cystadenocarcinoma cell sample namespace: FANTOM5 def: "Cystadenocarcinomas develop frequently in the ovaries, where pseudomucinous and serous types are recognised." [Biology-Online_Dictionary:http\://www.biology-online.org/dictionary/] synonym: "serous cystadenocarcinoma cell" EXACT [] xref: BTO:0004511 is_a: FF:0104883 ! cystadenocarcinoma cell line sample relationship: derives_from CL:0000313 ! serous secreting cell relationship: derives_from UBERON:0004911 ! epithelium of female gonad relationship: is_model_for DOID:2152 ! ovary epithelial cancer [Term] id: FF:0104785 name: Ewing's sarcoma family tumor cell line sample namespace: FANTOM5 def: "Ewing sarcoma family of tumors (ESFT) belong to the group of neoplasms commonly referred to as small, round, blue-cell tumors of childhood." [Dictionary_of_Cancer_Terms:http\://www.cancer.gov/] synonym: "ESFT cell line" RELATED [] synonym: "Ewing's sarcoma family tumor cell line" EXACT [] xref: BTO:0004785 is_a: FF:0100400 ! sarcoma cell line sample [Term] id: FF:0104802 name: bronchioloalveolar carcinoma cell sample namespace: FANTOM5 def: "A variant type of adenocarcinoma of the lung, with columnar to cuboidal cells lining the alveolar septa and projecting into alveolar spaces." [Medical_Dictionary:http\://medical-dictionary.thefreedictionary.com/] synonym: "alveolar adenocarcinoma cell" RELATED [] synonym: "alveolar carcinoma cell" RELATED [] synonym: "alveolar cell carcinoma cell" RELATED [] synonym: "bronchioalveolar adenocarcinoma cell" RELATED [] synonym: "bronchioalveolar carcinoma cell" RELATED [] synonym: "bronchiolar adenocarcinoma cell" RELATED [] synonym: "bronchiolar carcinoma cell" RELATED [] synonym: "bronchioloalveolar carcinoma cell" EXACT [] synonym: "bronchoalveolar adenocarcinoma cell" RELATED [] synonym: "bronchoalveolar carcinoma cell" RELATED [] xref: BTO:0004802 is_a: FF:0100762 ! lung cancer cell line sample [Term] id: FF:0104868 name: anaplastic large cell lymphoma cell line sample namespace: FANTOM5 def: "An aggressive (rapidly progressing) type of non-Hodgkins lymphoma that is usually of the T-cell type. The cancer cells express a marker called CD30 or Ki-1 on the surface, and may appear in the lymph nodes, skin, bones, soft tissues, lungs, or liver." [Comprehensive_Cancer_Center:http\://www.jamesline.com/cancertypes/glossary/index.cfm, NULL:NCI_Dictionary] synonym: "ALCL cell line" RELATED [] synonym: "anaplastic large cell lymphoma cell line" EXACT [] xref: BTO:0004868 is_a: FF:0100104 ! lymphoma cell line sample [Term] id: FF:0104883 name: cystadenocarcinoma cell line sample namespace: FANTOM5 synonym: "cystadenocarcinoma cell line" EXACT [] xref: BTO:0004883 is_a: FF:0101882 ! ovary adenocarcinoma cell line sample [Term] id: FF:0104965 name: 8505C cell sample namespace: FANTOM5 def: "Human anaplastic thyroid carcinoma cell line; established from the primary tumor of a 78-year-old woman with thyroid carcinoma." [Deutsche_Sammlung_von_Mikroorganismen_und_Zellkulturen_GmbH:DSMZ] synonym: "8505C cell" EXACT [] xref: BTO:0004965 is_a: FF:0103209 ! anaplastic thyroid cancer cell line sample [Term] id: FF:0104973 name: Hodgkin lymphoma cell line sample namespace: FANTOM5 def: "A disease of the lymph nodes named after the English physician Thomas Hodgkin." [Medical_Dictionary:http\://www.medterms.com/] synonym: "Hodgkin lymphoma cell line" EXACT [] is_a: FF:0100104 ! lymphoma cell line sample is_a: FF:0101035 ! hematopoietic cell line sample relationship: derives_from CL:0000738 ! leukocyte [Term] id: FF:0104975 name: human myotube cell sample namespace: FANTOM5 def: "Skeletal muscle cells derived from myotubules." [GOC:tfm] synonym: "myotube cell" EXACT [] is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000162 ! human skeletal muscle cell sample intersection_of: FF:0000162 ! human skeletal muscle cell sample intersection_of: derives_from CL:0002372 ! myotube relationship: derives_from CL:0002372 ! myotube [Term] id: FF:0104976 name: human nasal epithelial cell sample namespace: FANTOM5 synonym: "nasal epithelial cell" EXACT [] is_a: FF:0000210 ! human sample is_a: FF:0200002 ! olfactory epithelial cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: FF:0000210 ! human sample intersection_of: derives_from CL:0002167 ! olfactory epithelial cell relationship: derives_from CL:0002167 ! olfactory epithelial cell [Term] id: FF:0104978 name: HEp-2 cell sample namespace: FANTOM def: "Human Caucasian larynx carcinoma cell line with HeLa Characteristics." [GOC:tfm] synonym: "HEp-2 cell" EXACT [] synonym: "Hep2 cell" EXACT [] xref: BTO:0000976 is_a: FF:0100297 ! carcinoma cell line sample relationship: derives_from UBERON:0001737 ! larynx [Term] id: FF:0200002 name: olfactory epithelial cell sample namespace: FANTOM synonym: "olfactory epithelial cell" EXACT [] is_a: FF:0000002 ! in vivo cell sample intersection_of: FF:0000002 ! in vivo cell sample intersection_of: derives_from CL:0002167 ! olfactory epithelial cell relationship: derives_from CL:0002167 ! olfactory epithelial cell [Term] id: FF:0200003 name: iPS differentiation to neuron, control sample namespace: FANTOM synonym: "iPS differentiation to neuron, control" EXACT [] is_a: EFO:0001461 ! control is_a: FF:0200005 ! iPS differentiation to neuron sample [Term] id: FF:0200005 name: iPS differentiation to neuron sample namespace: FANTOM synonym: "iPS differentiation to neuron" EXACT [] is_a: EFO:0001746 ! development or differentiation design relationship: derives_from CL:0000540 ! neuron [Term] id: FF:0200006 name: myoblast differentiation to myotubes, control sample namespace: FANTOM synonym: "myoblast differentiation to myotubes, control" EXACT [] is_a: EFO:0001461 ! control is_a: EFO:0001746 ! development or differentiation design relationship: derives_from CL:0000056 ! myoblast relationship: derives_from CL:0002372 ! myotube [Term] id: FF:0200020 name: osteoclast, bone marrow-derived sample namespace: FANTOM synonym: "osteoclast, bone marrow-derived" EXACT [] is_a: FF:0101035 ! hematopoietic cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from CL:0000092 ! osteoclast intersection_of: derives_from UBERON:0002371 ! bone marrow relationship: derives_from CL:0000092 ! osteoclast relationship: derives_from UBERON:0002371 ! bone marrow [Term] id: FF:0200021 name: macrophage, bone marrow-derived sample namespace: FANTOM synonym: "macrophage, bone marrow-derived" EXACT [] xref: BTO:0004732 is_a: FF:0101035 ! hematopoietic cell line sample intersection_of: FF:0000003 ! cell line sample intersection_of: derives_from CL:0002476 ! bone marrow macrophage relationship: derives_from CL:0002476 ! bone marrow macrophage [Term] id: FF:0300104 name: EBF KO HPCs induced to T cell namespace: FANTOM is_a: EFO:0001746 ! development or differentiation design is_a: FF:0000342 ! T-cell induction sample is_a: FF:0000350 ! experimentally modified sample relationship: derives_from CL:0000084 ! T cell [Term] id: FF:0300105 name: mouse neurospheres sample namespace: FANTOM is_a: FF:0000103 ! mouse sample relationship: derives_from CL:0000031 ! neuroblast [Term] id: FF:0300106 name: mouse wildtype sample namespace: FANTOM is_a: FF:0000103 ! mouse sample [Term] id: FF:0300108 name: mouse pregnant day 19 sample namespace: FANTOM5 synonym: "mouse pregnant day 19" EXACT [] is_a: FF:0000317 ! mouse pregnant tissue sample [Term] id: FF:0300110 name: 13 days sample namespace: FANTOM5 synonym: "13 days" EXACT [] is_a: UO:0000033 ! day [Term] id: FF:0300111 name: mouse whole body sample namespace: FANTOM is_a: FF:0000103 ! mouse sample relationship: derives_from UBERON:0000468 ! multi-cellular organism [Term] id: FF:10000-101A1 name: Clontech Human Universal Reference Total RNA, pool1 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0000004 ! tissue sample is_a: FF:0000210 ! human sample [Term] id: FF:10001-101A3 name: Clontech Mouse Universal Reference Total RNA, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000004 ! tissue sample is_a: FF:0000103 ! mouse sample [Term] id: FF:10002-101A5 name: SABiosciences XpressRef Human Universal Total RNA, pool1 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0000004 ! tissue sample is_a: FF:0000210 ! human sample [Term] id: FF:10003-101A7 name: SABiosciences XpressRef Mouse Universal Total RNA, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000004 ! tissue sample is_a: FF:0000103 ! mouse sample is_a: FF:0000343 ! control treatment sample [Term] id: FF:10007-101B4 name: Universal RNA - Human Normal Tissues Biochain, pool1 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0000004 ! tissue sample is_a: FF:0000210 ! human sample [Term] id: FF:10008-101B6 name: Universal RNA - Mouse Normal Tissues Biochain, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000004 ! tissue sample is_a: FF:0000103 ! mouse sample is_a: FF:0000343 ! control treatment sample [Term] id: FF:10010-101C1 name: adipose tissue, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010010 ! human adipose tissue - adult sample [Term] id: FF:10011-101C2 name: bladder, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010011 ! human bladder - adult sample [Term] id: FF:10012-101C3 name: brain, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010012 ! human brain - adult sample [Term] id: FF:10013-101C4 name: cervix, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010013 ! human cervix - adult sample [Term] id: FF:10014-101C5 name: colon, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010014 ! human colon - adult sample [Term] id: FF:10015-101C6 name: esophagus, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010015 ! human esophagus - adult sample [Term] id: FF:10016-101C7 name: heart, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010016 ! human heart - adult sample [Term] id: FF:10017-101C8 name: kidney, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010017 ! human kidney - adult sample [Term] id: FF:10018-101C9 name: liver, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010018 ! human liver - adult sample [Term] id: FF:10019-101D1 name: lung, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010019 ! human lung - adult sample [Term] id: FF:10020-101D2 name: ovary, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010020 ! human ovary - adult sample [Term] id: FF:10021-101D3 name: placenta, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010021 ! human placenta - adult sample [Term] id: FF:10022-101D4 name: prostate, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010022 ! human prostate - adult sample [Term] id: FF:10023-101D5 name: skeletal muscle, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010023 ! human skeletal muscle - adult sample [Term] id: FF:10024-101D6 name: small intestine, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010024 ! human small intestine - adult sample is_a: FF:0010048 ! human smooth muscle - adult sample [Term] id: FF:10025-101D7 name: spleen, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010025 ! human spleen - adult sample [Term] id: FF:10026-101D8 name: testis, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010026 ! human testis - adult sample [Term] id: FF:10027-101D9 name: thymus, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010027 ! thymus - adult human sample [Term] id: FF:10028-101E1 name: thyroid, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010028 ! human thyroid - adult sample [Term] id: FF:10029-101E2 name: trachea, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010029 ! human trachea - adult sample [Term] id: FF:10030-101E3 name: retina, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010030 ! human retina - adult sample [Term] id: FF:10031-101E4 name: temporal lobe, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010031 ! human temporal lobe - adult sample [Term] id: FF:10032-101E5 name: postcentral gyrus, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010032 ! human postcentral gyrus - adult sample [Term] id: FF:10033-101E6 name: pons, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010033 ! human pons - adult sample [Term] id: FF:10034-101E7 name: parietal lobe, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010034 ! human parietal lobe - adult sample [Term] id: FF:10035-101E8 name: paracentral gyrus, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010035 ! human paracentral gyrus - adult sample [Term] id: FF:10036-101E9 name: occipital pole, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010036 ! human occipital pole - adult sample [Term] id: FF:10037-101F1 name: nucleus accumbens, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010037 ! human nucleus accumbens - adult sample [Term] id: FF:10038-101F2 name: medulla oblongata, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010038 ! human medulla oblongata - adult sample [Term] id: FF:10039-101F3 name: insula, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010039 ! human insula - adult sample [Term] id: FF:10040-101F4 name: frontal lobe, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010040 ! human frontal lobe - adult sample [Term] id: FF:10041-101F5 name: dura mater, adult, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010041 ! human dura mater - adult sample [Term] id: FF:10042-101F6 name: corpus callosum, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010042 ! human corpus callosum - adult sample [Term] id: FF:10043-101F7 name: thymus, fetal, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010043 ! human thymus - fetal sample [Term] id: FF:10044-101F8 name: spleen, fetal, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010044 ! human spleen - fetal sample [Term] id: FF:10045-101F9 name: kidney, fetal, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010045 ! human kidney - fetal sample [Term] id: FF:10046-101G1 name: heart, fetal, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010046 ! human heart - fetal sample [Term] id: FF:10047-101G2 name: tonsil, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010047 ! human tonsil - adult sample [Term] id: FF:10048-101G3 name: smooth muscle, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010048 ! human smooth muscle - adult sample [Term] id: FF:10049-101G4 name: pancreas, adult, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010049 ! human pancreas - adult sample [Term] id: FF:10050-101G5 name: heart, adult, diseased post-infarction, donor1 namespace: FANTOM5 comment: Previously: heart, adult, donor1, rep1 (9070074A) subset: phase1 subset: update022 is_a: FF:0010016 ! human heart - adult sample relationship: is_model_for DOID:5844 ! myocardial infarction [Term] id: FF:10051-101G6 name: heart, adult, diseased, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: FF:0010016 ! human heart - adult sample relationship: is_model_for DOID:114 ! heart disease [Term] id: FF:10052-101G7 name: aorta, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010052 ! human aorta - adult sample [Term] id: FF:10053-101G8 name: blood, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010053 ! human blood - adult sample [Term] id: FF:10054-101G9 name: eye, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010054 ! human eye - fetal sample [Term] id: FF:10055-101H1 name: uterus, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010055 ! human uterus - fetal sample [Term] id: FF:10056-101H2 name: spinal cord, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010056 ! human spinal cord - fetal sample [Term] id: FF:10057-101H3 name: umbilical cord, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010057 ! human umbilical cord - fetal sample [Term] id: FF:10058-101H4 name: trachea, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010058 ! human trachea - fetal sample [Term] id: FF:10059-101H5 name: tongue, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010059 ! human tongue - fetal sample [Term] id: FF:10060-101H6 name: thyroid, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010060 ! human thyroid - fetal sample [Term] id: FF:10061-101H7 name: throat, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010061 ! human throat - fetal sample [Term] id: FF:10062-101H8 name: stomach, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010062 ! human stomach - fetal sample [Term] id: FF:10063-101H9 name: temporal lobe, fetal, donor1, tech_rep2 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0010071 ! human temporal lobe - fetal sample [Term] id: FF:10064-101I1 name: small intestine, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010064 ! human small intestine - fetal sample [Term] id: FF:10065-101I2 name: skin, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010065 ! human skin - fetal sample [Term] id: FF:10066-101I3 name: skeletal muscle, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010066 ! human skeletal muscle - fetal sample [Term] id: FF:10067-101I4 name: rectum, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010067 ! human rectum - fetal sample [Term] id: FF:10068-101I5 name: lung, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010068 ! human lung - fetal sample [Term] id: FF:10069-101I6 name: diaphragm, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010069 ! human diaphragm - fetal sample [Term] id: FF:10070-101I7 name: colon, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010070 ! human colon - fetal sample [Term] id: FF:10071-101I8 name: duodenum, fetal, donor1,rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010063 ! human duodenum - fetal sample [Term] id: FF:10072-101I9 name: parietal lobe, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010072 ! human parietal lobe - fetal sample [Term] id: FF:10073-102A1 name: occipital lobe, fetal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010073 ! human occipital lobe - fetal sample [Term] id: FF:10074-102A2 name: skin, adult, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010074 ! human skin - adult sample [Term] id: FF:10075-102A3 name: lung, right lower lobe, adult, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010019 ! human lung - adult sample relationship: derives_from UBERON:0002171 ! lower lobe of right lung [Term] id: FF:10076-102A4 name: occipital lobe, adult, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010076 ! human occipital lobe - adult sample [Term] id: FF:10077-102A5 name: lymph node, adult, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010077 ! human lymph node - adult sample [Term] id: FF:10078-102A6 name: left ventricle, adult, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010078 ! human left ventricle - adult sample [Term] id: FF:10079-102A7 name: left atrium, adult, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010079 ! human left atrium - adult sample [Term] id: FF:10080-102A8 name: breast, adult, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010080 ! human breast - adult sample [Term] id: FF:10081-102A9 name: adrenal gland, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010081 ! human adrenal gland - adult sample [Term] id: FF:10082-102B1 name: colon, adult, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010014 ! human colon - adult sample [Term] id: FF:10083-102B2 name: cerebellum, adult, pool1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010083 ! human cerebellum - adult sample [Term] id: FF:10084-102B3 name: brain, adult, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010012 ! human brain - adult sample [Term] id: FF:10085-102B4 name: brain, fetal, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010085 ! human brain - fetal sample [Term] id: FF:10086-102B5 name: liver, fetal, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010086 ! human liver - fetal sample [Term] id: FF:10093-102C3 name: salivary gland, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010093 ! human salivary gland - adult sample [Term] id: FF:10096-102C6 name: testis, adult, pool2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010026 ! human testis - adult sample [Term] id: FF:10100-102D1 name: uterus, adult, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010100 ! human uterus - adult sample [Term] id: FF:10150-102I6 name: medial frontal gyrus, adult, donor10252 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample relationship: derives_from UBERON:0002702 ! middle frontal gyrus [Term] id: FF:10151-102I7 name: amygdala, adult, donor10252 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0010151 ! human amygdala - adult donor sample [Term] id: FF:10153-102I9 name: hippocampus, adult, donor10252 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0010012 ! human brain - adult sample is_a: FF:0010153 ! hippocampus - adult sample [Term] id: FF:10154-103A1 name: thalamus, adult, donor10252 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0010154 ! human thalamus - adult donor sample [Term] id: FF:10155-103A2 name: medulla oblongata, adult, donor10252 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0010038 ! human medulla oblongata - adult sample [Term] id: FF:10156-103A3 name: medial temporal gyrus, donor10252 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010156 ! human medial temporal gyrus donor sample [Term] id: FF:10157-103A4 name: parietal lobe, adult, donor10252 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0010034 ! human parietal lobe - adult sample [Term] id: FF:10158-103A5 name: substantia nigra, adult, donor10252 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0010158 ! human substantia nigra - adult donor sample [Term] id: FF:10159-103A6 name: spinal cord, adult, donor10252 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0010159 ! human spinal cord - adult sample [Term] id: FF:10160-103A7 name: pineal gland, adult, donor10252 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0010160 ! human pineal gland - adult sample [Term] id: FF:10161-103A8 name: globus pallidus, adult, donor10252 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0010161 ! human globus pallidus - adult donor sample [Term] id: FF:10162-103A9 name: pituitary gland, adult, donor10252 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0010162 ! human pituitary gland - adult sample [Term] id: FF:10163-103B1 name: occipital cortex, adult, donor10252 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0010076 ! human occipital lobe - adult sample [Term] id: FF:10164-103B2 name: caudate nucleus, adult, donor10252 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0010164 ! human caudate nucleus - adult donor sample [Term] id: FF:10165-103B3 name: locus coeruleus, adult, donor10252 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0011487 ! human locus coeruleus- adult sample [Term] id: FF:10166-103B4 name: cerebellum, adult, donor10252 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0010083 ! human cerebellum - adult sample [Term] id: FF:10167-103B5 name: amygdala, adult- library namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010151 ! human amygdala - adult donor sample [Term] id: FF:10168-103B6 name: thalamus, adult- library namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010154 ! human thalamus - adult donor sample [Term] id: FF:10169-103B7 name: hippocampus, adult- library namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010012 ! human brain - adult sample is_a: FF:0010153 ! hippocampus - adult sample [Term] id: FF:10170-103B8 name: medial frontal gyrus - adult, donor10196 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0000004 ! tissue sample is_a: FF:0000210 ! human sample relationship: derives_from UBERON:0002702 ! middle frontal gyrus relationship: derives_from UBERON:0007023 ! adult organism [Term] id: FF:10171-103B9 name: parietal lobe, adult- library namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010034 ! human parietal lobe - adult sample [Term] id: FF:10172-103C1 name: occipital cortex, adult- library namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010076 ! human occipital lobe - adult sample [Term] id: FF:10173-103C2 name: cerebellum - adult, donor10196 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0010083 ! human cerebellum - adult sample [Term] id: FF:10174-103C3 name: medulla oblongata, adult- library namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010038 ! human medulla oblongata - adult sample [Term] id: FF:10175-103C4 name: globus pallidus, adult- library namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010161 ! human globus pallidus - adult donor sample [Term] id: FF:10176-103C5 name: putamen, adult, donor10196 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010087 ! human putamen - adult donor sample [Term] id: FF:10177-103C6 name: caudate nucleus, adult- library namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010164 ! human caudate nucleus - adult donor sample [Term] id: FF:10178-103C7 name: substantia nigria, adult- library namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010158 ! human substantia nigra - adult donor sample [Term] id: FF:10179-103C8 name: pineal gland, adult- library namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010160 ! human pineal gland - adult sample [Term] id: FF:10180-103C9 name: pituitary gland, adult- library namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010162 ! human pituitary gland - adult sample [Term] id: FF:10181-103D1 name: spinal cord, adult- library namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010159 ! human spinal cord - adult sample [Term] id: FF:10182-103D2 name: locus coeruleus - adult, donor10196 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0011487 ! human locus coeruleus- adult sample [Term] id: FF:10183-103D3 name: medial temporal gyrus, adult-library namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010150 ! human medial temporal gyrus - adult sample [Term] id: FF:10188-103D8 name: cerebral meninges, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010188 ! human cerebral meninges - adult sample [Term] id: FF:10189-103D9 name: appendix, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010189 ! human appendix - adult sample [Term] id: FF:10190-103E1 name: artery, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010190 ! human artery - adult sample [Term] id: FF:10191-103E2 name: vein, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010191 ! human vein - adult sample [Term] id: FF:10192-103E3 name: bone marrow, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010192 ! human bone marrow - adult sample [Term] id: FF:10193-103E4 name: diencephalon, adult, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010193 ! human diencephalon - adult sample [Term] id: FF:10195-103E6 name: olfactory region, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010195 ! human olfactory region - adult sample [Term] id: FF:10196-103E7 name: ductus deferens, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010196 ! human ductus deferens - adult sample [Term] id: FF:10197-103E8 name: epididymis, adult, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0011289 ! epididymis- adult sample [Term] id: FF:10198-103E9 name: gall bladder, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010198 ! human gall bladder - adult sample [Term] id: FF:10199-103F1 name: parotid gland, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010199 ! human parotid gland - adult sample [Term] id: FF:10200-103F2 name: penis, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010200 ! human penis - adult sample [Term] id: FF:10201-103F3 name: seminal vesicle, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010201 ! human seminal vesicle - adult sample [Term] id: FF:10202-103F4 name: submaxillary gland, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010202 ! human submaxillary gland - adult sample [Term] id: FF:10203-103F5 name: tongue, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010203 ! human tongue - adult sample [Term] id: FF:10204-103F6 name: vagina, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010204 ! human vagina - adult sample [Term] id: FF:10205-103F7 name: heart - mitral valve, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010205 ! human heart, mitral valve - adult sample [Term] id: FF:10206-103F8 name: heart - pulmonic valve, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010206 ! human heart, pulmonic valve - adult sample [Term] id: FF:10207-103F9 name: heart - tricuspid valve, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010207 ! human heart, tricuspid valve - adult sample [Term] id: FF:10209-103G2 name: throat, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0010209 ! human throat - adult sample [Term] id: FF:10235-104A1 name: visual cortex - wildtype, neonate N15, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011268 ! mouse visual cortex from wildtype- neonate N15 sample [Term] id: FF:10236-104A2 name: visual cortex - wildtype, neonate N15, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011268 ! mouse visual cortex from wildtype- neonate N15 sample [Term] id: FF:10237-104A3 name: visual cortex - wildtype, neonate N15, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011268 ! mouse visual cortex from wildtype- neonate N15 sample [Term] id: FF:10238-104A4 name: visual cortex - wildtype, neonate N30, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011269 ! mouse visual cortex from wildtype- neonate N30 sample [Term] id: FF:10239-104A5 name: visual cortex - wildtype, neonate N30, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011269 ! mouse visual cortex from wildtype- neonate N30 sample [Term] id: FF:10240-104A6 name: visual cortex - wildtype, neonate N30, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011269 ! mouse visual cortex from wildtype- neonate N30 sample [Term] id: FF:10241-104A7 name: visual cortex - wildtype, neonate N60-70, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011270 ! mouse visual cortex from wildtype- neonate N60-70 sample [Term] id: FF:10242-104A8 name: visual cortex - wildtype, neonate N60-70, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011270 ! mouse visual cortex from wildtype- neonate N60-70 sample [Term] id: FF:10243-104A9 name: visual cortex - wildtype, neonate N60-70, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011270 ! mouse visual cortex from wildtype- neonate N60-70 sample [Term] id: FF:10252-104B9 name: Ileum epithelium, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011274 ! mouse Ileum epithelium sample [Term] id: FF:10253-104C1 name: Ileum epithelium, pool2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0011274 ! mouse Ileum epithelium sample [Term] id: FF:10260-104C8 name: Ileum epithelium 3days after RANKL, pool3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011478 ! mouse Ileum epithelium 3days after RANKL sample [Term] id: FF:10262-104D1 name: Follicle Associated Epithelium, pool2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011473 ! mouse Follicle Associated Epithelium sample [Term] id: FF:10263-104D2 name: Follicle Associated Epithelium, pool3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011473 ! mouse Follicle Associated Epithelium sample relationship: derives_from UBERON:0000483 ! epithelium relationship: derives_from UBERON:0003199 ! egg chamber [Term] id: FF:10268-104D7 name: eye - vitreous humor, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011157 ! human eye - vitreous humor sample [Term] id: FF:10272-104E2 name: eye - muscle inferior rectus, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011153 ! human eye - muscle inferior rectus sample [Term] id: FF:10277-104E7 name: optic nerve, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011166 ! human optic nerve sample [Term] id: FF:10282-104F3 name: skeletal muscle - soleus muscle, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011173 ! human skeletal muscle - soleus muscle sample [Term] id: FF:10286-104F7 name: Skin - palm, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011177 ! human Skin - palm sample [Term] id: FF:10288-104F9 name: tongue epidermis (fungiform papillae), donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011458 ! tongue epidermis (fungiform papillae) sample [Term] id: FF:10292-104G4 name: achilles tendon, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011147 ! human achilles tendon sample [Term] id: FF:10294-104G6 name: cerebrospinal fluid, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011151 ! human cerebrospinal fluid sample [Term] id: FF:10295-104G7 name: cruciate ligament, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011152 ! human cruciate ligament sample [Term] id: FF:10297-104G9 name: eye - muscle superior, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011156 ! human eye - muscle superior sample [Term] id: FF:10298-104H1 name: eye - muscle lateral, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011154 ! human eye - muscle lateral sample [Term] id: FF:10299-104H2 name: eye - muscle medial, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011155 ! human eye - muscle medial sample [Term] id: FF:10301-104H4 name: Fingernail (including nail plate, eponychium and hyponychium), donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011460 ! Fingernail (including nail plate- eponychium and hyponychium) sample [Term] id: FF:10319-105A4 name: Urethra, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011181 ! human Urethra sample [Term] id: FF:10349-105D7 name: visual cortex - wildtype, neonate N15, donor5 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0000316 ! mouse neonate N15 sample relationship: derives_from UBERON:0000411 ! visual cortex [Term] id: FF:1035-18D5 name: stomach, embryo E17, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011492 ! mouse stomach- embryo E17 sample [Term] id: FF:10399-106A3 name: acute myeloid leukemia (FAB M5) cell line:THP-1, rep3 (fresh) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101370 ! THP-1 cell sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10400-106A4 name: acute myeloid leukemia (FAB M5) cell line:THP-1, rep1 (revived) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101370 ! THP-1 cell sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10405-106A9 name: acute myeloid leukemia (FAB M5) cell line:THP-1, rep3 (thawed) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101370 ! THP-1 cell sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10408-106B3 name: lung adenocarcinoma cell line:PC-14, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102877 ! PC-14 cell sample [Term] id: FF:10409-106B4 name: chronic myelogenous leukemia cell line:KU812, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100732 ! KU-812 cell sample [Term] id: FF:10410-106B5 name: extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101574 ! chondrosarcoma cell line sample relationship: is_model_for DOID:6496 ! extraskeletal myxoid chondrosarcoma [Term] id: FF:10411-106B6 name: renal cell carcinoma cell line:OS-RC-2, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102403 ! OS-RC-2 cell sample [Term] id: FF:10412-106B7 name: malignant trichilemmal cyst cell line:DJM-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102024 ! squamous cell carcinoma cell line sample [Term] id: FF:10413-106B8 name: glioma cell line:GI-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100711 ! glioma cell line sample [Term] id: FF:10414-106B9 name: maxillary sinus tumor cell line:HSQ-89, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000003 ! cell line sample is_a: FF:0000210 ! human sample relationship: derives_from UBERON:0001764 ! maxillary sinus relationship: is_model_for DOID:1357 ! maxillary sinus cancer [Term] id: FF:10415-106C1 name: gall bladder carcinoma cell line:TGBC2TKB, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample relationship: derives_from CL:1000415 ! epithelial cell of gall bladder [Term] id: FF:10416-106C2 name: chronic lymphocytic leukemia (T-CLL) cell line:SKW-3, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103505 ! T-cell chronic lymphocytic leukemia cell sample [Term] id: FF:10417-106C3 name: papillotubular adenocarcinoma cell line:TGBC18TKB, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100003 ! intestinal cell line sample is_a: FF:0100167 ! adenocarcinoma cell line sample is_a: FF:0101533 ! gastrointestinal cancer cell sample relationship: derives_from UBERON:0004913 ! hepatopancreatic ampulla relationship: is_model_for DOID:3119 ! gastrointestinal system cancer relationship: is_model_for DOID:4929 ! tubular adenocarcinoma [Term] id: FF:10418-106C4 name: transitional-cell carcinoma cell line:5637, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103137 ! 5637 cell sample [Term] id: FF:10419-106C5 name: breast carcinoma cell line:MDA-MB-453, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101908 ! MDA-MB-453 cell sample [Term] id: FF:10420-106C6 name: colon carcinoma cell line:COLO-320, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102047 ! Colo-320 cell sample [Term] id: FF:10421-106C7 name: adult T-cell leukemia cell line:ATN-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0104049 ! adult T-cell lymphoma cell line sample [Term] id: FF:10422-106C8 name: Burkitt's lymphoma cell line:DAUDI, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101561 ! DAUDI cell sample [Term] id: FF:10423-106C9 name: choriocarcinoma cell line:BeWo, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100798 ! BeWo cell sample [Term] id: FF:10424-106D1 name: splenic lymphoma with villous lymphocytes cell line:SLVL, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100104 ! lymphoma cell line sample relationship: derives_from UBERON:0002106 ! spleen [Term] id: FF:10425-106D2 name: astrocytoma cell line:TM-31, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100101 ! astrocytoma cell line sample [Term] id: FF:10426-106D3 name: epidermoid carcinoma cell line:A431, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100017 ! A-431 cell sample [Term] id: FF:10427-106D4 name: b cell line:RPMI1788, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101522 ! B-lymphocyte cell line sample [Term] id: FF:10428-106D5 name: anaplastic carcinoma cell line:8305C, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100919 ! 8305C cell sample [Term] id: FF:10429-106D6 name: acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101952 ! HPB-ALL cell sample relationship: derives_from CL:0000084 ! T cell [Term] id: FF:10430-106D7 name: non T non B acute lymphoblastic leukemia (ALL) cell line:P30/OHK, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000003 ! cell line sample is_a: FF:0000210 ! human sample [Term] id: FF:10431-106D8 name: epidermoid carcinoma cell line:Ca Ski, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102024 ! squamous cell carcinoma cell line sample is_a: FF:0103109 ! CaSki cell sample relationship: derives_from CL:0002535 ! epithelial cell of cervix [Term] id: FF:10432-106D9 name: bile duct carcinoma cell line:HuCCT1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0103911 ! HuCCT-1 cell sample [Term] id: FF:10433-106E1 name: giant cell carcinoma cell line:Lu99B, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102411 ! giant cell carcinoma cell line sample [Term] id: FF:10434-106E2 name: oral squamous cell carcinoma cell line:Ca9-22, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102211 ! oral squamous cell carcinoma cell line sample [Term] id: FF:10435-106E3 name: Hodgkin's lymphoma cell line:HD-Mar2, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0104973 ! Hodgkin lymphoma cell line sample [Term] id: FF:10436-106E4 name: signet ring carcinoma cell line:Kato III, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100167 ! adenocarcinoma cell line sample is_a: FF:0101092 ! KATO-III cell sample relationship: is_model_for DOID:3493 ! signet ring cell adenocarcinoma [Term] id: FF:10437-106E5 name: papillary adenocarcinoma cell line:8505C, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100167 ! adenocarcinoma cell line sample is_a: FF:0104965 ! 8505C cell sample relationship: is_model_for DOID:3112 ! papillary adenocarcinoma [Term] id: FF:10438-106E6 name: ductal cell carcinoma cell line:KLM-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0100794 ! pancreatic cancer cell line sample relationship: derives_from CL:0000083 ! epithelial cell of pancreas relationship: is_model_for DOID:3498 ! pancreatic ductal adenocarcinoma [Term] id: FF:10439-106E7 name: prostate cancer cell line:PC-3, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101061 ! PC-3 cell sample [Term] id: FF:10441-106E9 name: synovial sarcoma cell line:HS-SY-II, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100400 ! sarcoma cell line sample is_a: FF:0101120 ! epithelial cell line sample relationship: derives_from CL:0000214 ! synovial cell [Term] id: FF:10442-106F1 name: schwannoma cell line:HS-PSS, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103225 ! neurilemoma cell line sample [Term] id: FF:10443-106F2 name: epithelioid sarcoma cell line:HS-ES-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000003 ! cell line sample is_a: FF:0000210 ! human sample relationship: is_model_for DOID:6193 ! epithelioid sarcoma [Term] id: FF:10444-106F3 name: glioblastoma cell line:A172, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100016 ! A-172 cell sample [Term] id: FF:10448-106F7 name: endometrial stromal sarcoma cell line:OMC-9, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100400 ! sarcoma cell line sample is_a: FF:0101555 ! endometrial cancer cell line sample [Term] id: FF:10449-106F8 name: cord blood derived cell line:COBL-a untreated, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0000343 ! control treatment sample is_a: FF:0104053 ! umbilical cord blood sample [Term] id: FF:10450-106F9 name: embryonic kidney cell line: HEK293/SLAM untreated, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100007 ! HEK-293 cell sample [Term] id: FF:10451-106G1 name: embryonic kidney cell line: HEK293/SLAM infection, 24hr, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100007 ! HEK-293 cell sample [Term] id: FF:10452-106G2 name: cord blood derived cell line:COBL-a 24h infection(-C), rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0000625 ! experimental infection sample is_a: FF:0104053 ! umbilical cord blood sample relationship: derives_from CL:0000081 ! blood cell [Term] id: FF:10453-106G3 name: cord blood derived cell line:COBL-a 24h infection, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0000625 ! experimental infection sample is_a: FF:0104053 ! umbilical cord blood sample [Term] id: FF:10454-106G4 name: chronic myelogenous leukemia cell line:K562, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100664 ! K-562 cell sample [Term] id: FF:10455-106G5 name: acute lymphoblastic leukemia (B-ALL) cell line:BALL-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102144 ! acute lymphoblastic leukemia cell line sample relationship: is_model_for DOID:12603 ! acute leukemia [Term] id: FF:10463-106H4 name: squamous cell carcinoma cell line:EC-GI-10, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102024 ! squamous cell carcinoma cell line sample [Term] id: FF:10464-106H5 name: acute lymphoblastic leukemia (T-ALL) cell line:Jurkat, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100661 ! JURKAT cell sample [Term] id: FF:10465-106H6 name: melanoma cell line:G-361, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101584 ! G-361 cell sample [Term] id: FF:10469-106I1 name: rectal cancer cell line:TT1TKB, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101532 ! rectal cancer cell line sample [Term] id: FF:10470-106I2 name: gall bladder carcinoma cell line:TGBC14TKB, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample relationship: derives_from CL:1000415 ! epithelial cell of gall bladder [Term] id: FF:10471-106I3 name: renal cell carcinoma cell line:TUHR10TKB, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103732 ! TUHR-10TKB cell sample [Term] id: FF:10474-106I6 name: myeloma cell line:PCM6, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100899 ! myeloma cell line sample [Term] id: FF:10475-106I7 name: retinoblastoma cell line:Y79, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102920 ! Y-79 cell sample [Term] id: FF:10476-106I8 name: Burkitt's lymphoma cell line:RAJI, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101154 ! RAJI cell sample [Term] id: FF:10477-106I9 name: rhabdomyosarcoma cell line:RMS-YM, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102267 ! rhabdomyosarcoma cell line sample [Term] id: FF:10482-107A5 name: breast carcinoma cell line:MCF7, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100093 ! MCF-7 cell sample [Term] id: FF:10483-107A6 name: signet ring carcinoma cell line:NUGC-4, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100167 ! adenocarcinoma cell line sample relationship: is_model_for DOID:3493 ! signet ring cell adenocarcinoma [Term] id: FF:10484-107A7 name: hepatoma cell line:Li-7, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100578 ! hepatoma cell line sample [Term] id: FF:10485-107A8 name: glioblastoma cell line:T98G, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101583 ! T-98G cell sample [Term] id: FF:10486-107A9 name: squamous cell lung carcinoma cell line:EBC-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103001 ! EBC-1 cell sample [Term] id: FF:10487-107B1 name: giant cell carcinoma cell line:LU65, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102411 ! giant cell carcinoma cell line sample [Term] id: FF:10488-107B2 name: ductal cell carcinoma cell line:MIA Paca2, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0100794 ! pancreatic cancer cell line sample relationship: derives_from CL:0000083 ! epithelial cell of pancreas relationship: is_model_for DOID:3498 ! pancreatic ductal adenocarcinoma [Term] id: FF:10490-107B4 name: prostate cancer cell line:DU145, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101332 ! DU-145 cell sample [Term] id: FF:10492-107B6 name: transitional-cell carcinoma cell line:JMSU1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102869 ! transitional cell carcinoma cell line sample [Term] id: FF:10493-107B7 name: mesothelioma cell line:ACC-MESO-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample [Term] id: FF:10494-107B8 name: mesothelioma cell line:ACC-MESO-4, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample [Term] id: FF:10496-107C1 name: bile duct carcinoma cell line:TFK-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0103910 ! bile duct cancer cell line sample [Term] id: FF:10497-107C2 name: endometrial carcinoma cell line:OMC-2, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100658 ! uterine adenocarcinoma cell sample is_a: FF:0101555 ! endometrial cancer cell line sample [Term] id: FF:10499-107C4 name: lung adenocarcinoma cell line:A549, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100018 ! A-549 cell sample [Term] id: FF:10508-107D4 name: neuroblastoma cell line:CHP-134, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102989 ! CHP-134 cell sample [Term] id: FF:10509-107D5 name: large cell lung carcinoma cell line:IA-LM, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102205 ! large cell lung cancer cell line sample [Term] id: FF:10510-107D6 name: osteosarcoma cell line:143B/TK^(-)neo^(R), rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100407 ! osteosarcoma cell line sample relationship: is_model_for DOID:3347 ! osteosarcoma [Term] id: FF:10513-107D9 name: colon carcinoma cell line:CACO-2, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100195 ! CACO-2 cell sample [Term] id: FF:10514-107E1 name: melanoma cell line:COLO 679, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100849 ! melanoma cell line sample [Term] id: FF:10534-107G3 name: acute lymphoblastic leukemia (B-ALL) cell line:NALM-6, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103288 ! NALM-6 cell sample [Term] id: FF:10536-107G5 name: cholangiocellular carcinoma cell line:HuH-28, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102842 ! cholangioma cell sample [Term] id: FF:10539-107G8 name: neuroblastoma cell line:NB-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100932 ! neuroblastoma cell line sample [Term] id: FF:10541-107H1 name: small cell lung carcinoma cell line:LK-2, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100189 ! small cell lung cancer cell sample [Term] id: FF:10544-107H4 name: oral squamous cell carcinoma cell line:SAS, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103981 ! SAS cell sample [Term] id: FF:10545-107H5 name: oral squamous cell carcinoma cell line:HSC-3, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102025 ! HSC-3 cell sample [Term] id: FF:10549-107H9 name: gastric cancer cell line:AZ521, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100787 ! gastric cancer cell line sample [Term] id: FF:10550-107I1 name: oral squamous cell carcinoma cell line:HO-1-u-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102211 ! oral squamous cell carcinoma cell line sample [Term] id: FF:10552-107I3 name: cervical cancer cell line:D98-AH2, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101967 ! cervical cancer cell line sample [Term] id: FF:10553-107I4 name: cervical cancer cell line:ME-180, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101967 ! cervical cancer cell line sample [Term] id: FF:10555-107I6 name: neuroblastoma cell line:NH-12, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100932 ! neuroblastoma cell line sample [Term] id: FF:10558-107I9 name: osteosarcoma cell line:HS-Os-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100407 ! osteosarcoma cell line sample [Term] id: FF:10562-108A4 name: small cell lung carcinoma cell line:WA-hT, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100189 ! small cell lung cancer cell sample [Term] id: FF:10563-108A5 name: xeroderma pigentosum b cell line:XPL 17, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101522 ! B-lymphocyte cell line sample relationship: is_model_for DOID:0050427 ! xeroderma pigmentosum [Term] id: FF:10568-108B1 name: mesenchymal stem cell line:Hu5/E18, rep1 (new batch) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000003 ! cell line sample is_a: FF:0000210 ! human sample relationship: derives_from CL:0000134 ! mesenchymal cell [Term] id: FF:10569-108B2 name: leiomyoma cell line:10964C, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102694 ! leiomyoma cell sample [Term] id: FF:10570-108B3 name: leiomyoma cell line:15242A, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102694 ! leiomyoma cell sample [Term] id: FF:10571-108B4 name: leiomyoma cell line:15425, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102694 ! leiomyoma cell sample [Term] id: FF:10589-108D4 name: argyrophil small cell carcinoma cell line:TC-YIK, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0101967 ! cervical cancer cell line sample relationship: derives_from CL:0002535 ! epithelial cell of cervix [Term] id: FF:10590-108D5 name: testicular germ cell embryonal carcinoma cell line:NEC8, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100306 ! teratocarcinoma cell line sample is_a: FF:0100669 ! embryonic cell line sample relationship: derives_from CL:0000586 ! germ cell relationship: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000922 ! embryo relationship: is_model_for DOID:3095 ! germ cell and embryonal cancer [Term] id: FF:10591-108D6 name: testicular germ cell embryonal carcinoma cell line:NEC14, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100306 ! teratocarcinoma cell line sample is_a: FF:0100669 ! embryonic cell line sample relationship: derives_from CL:0000586 ! germ cell relationship: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000922 ! embryo relationship: is_model_for DOID:3095 ! germ cell and embryonal cancer [Term] id: FF:10593-108D8 name: testicular germ cell embryonal carcinoma cell line:NEC15, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100306 ! teratocarcinoma cell line sample is_a: FF:0100669 ! embryonic cell line sample relationship: derives_from CL:0000586 ! germ cell relationship: derives_from UBERON:0000473 ! testis relationship: derives_from UBERON:0000922 ! embryo relationship: is_model_for DOID:3095 ! germ cell and embryonal cancer [Term] id: FF:10597-108E3 name: Wilms' tumor cell line:HFWT, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103192 ! renal cancer cell line sample [Term] id: FF:10600-108E6 name: myxofibrosarcoma cell line:MFH-ino, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100460 ! fibrosarcoma cell line sample relationship: derives_from CL:0002620 ! skin fibroblast relationship: is_model_for DOID:1907 ! malignant fibroxanthoma [Term] id: FF:10603-108E9 name: embryonic pancreas cell line:2C6, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100669 ! embryonic cell line sample relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:10604-108F1 name: embryonic pancreas cell line:1B2C6, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100669 ! embryonic cell line sample relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:10605-108F2 name: embryonic pancreas cell line:1C3D3, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100669 ! embryonic cell line sample relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:10606-108F3 name: embryonic pancreas cell line:1C3IKEI, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100669 ! embryonic cell line sample relationship: derives_from UBERON:0001264 ! pancreas [Term] id: FF:10607-108F4 name: neuroblastoma cell line:NBsusSR, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100932 ! neuroblastoma cell line sample [Term] id: FF:10609-108F6 name: small-cell gastrointestinal carcinoma cell line:ECC4, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0101533 ! gastrointestinal cancer cell sample [Term] id: FF:10610-108F7 name: small cell gastrointestinal carcinoma cell line:ECC10, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0101533 ! gastrointestinal cancer cell sample [Term] id: FF:10612-108F9 name: gastric adenocarcinoma cell line:MKN45, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101225 ! MKN-45 cell sample [Term] id: FF:10614-108G2 name: gastric adenocarcinoma cell line:MKN1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102384 ! MKN-1 cell sample [Term] id: FF:10615-108G3 name: gastrointestinal carcinoma cell line:ECC12, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample is_a: FF:0101533 ! gastrointestinal cancer cell sample [Term] id: FF:10616-108G4 name: squamous cell carcinoma cell line:T3M-5, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102024 ! squamous cell carcinoma cell line sample [Term] id: FF:10618-108G6 name: choriocarcinoma cell line:T3M-3, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101575 ! choriocarcinoma cell line sample [Term] id: FF:10624-108H3 name: granulosa cell tumor cell line:KGN, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102285 ! granulosa cell line sample [Term] id: FF:1063-29H9 name: accessory axillary lymph node - adult namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000103 ! mouse sample is_a: FF:0000998 ! adult tissue sample relationship: derives_from UBERON:0001097 ! axillary lymph node [Term] id: FF:10631-108I1 name: diffuse large B-cell lymphoma cell line:CTB-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102521 ! diffuse large B-cell lymphoma cell sample relationship: derives_from CL:0000819 ! B-1 B cell [Term] id: FF:10633-108I3 name: hepatoblastoma cell line:HuH-6, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101670 ! HuH-6 cell sample [Term] id: FF:10636-108I6 name: clear cell carcinoma cell line:TEN, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102787 ! clear cell adenocarcinoma cell sample [Term] id: FF:10637-108I7 name: neuroectodermal tumor cell line:FU-RPNT-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100669 ! embryonic cell line sample relationship: derives_from UBERON:0002346 ! neurectoderm relationship: is_model_for DOID:171 ! neuroectodermal tumor [Term] id: FF:10638-108I8 name: clear cell carcinoma cell line:JHOC-5, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102787 ! clear cell adenocarcinoma cell sample [Term] id: FF:10639-108I9 name: serous adenocarcinoma cell line:JHOS-2, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103803 ! serous adenocarcinoma cell line sample [Term] id: FF:10642-109A3 name: carcinosarcoma cell line:JHUCS-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100197 ! carcinosarcoma cell sample [Term] id: FF:10643-109A4 name: endometrioid adenocarcinoma cell line:JHUEM-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100658 ! uterine adenocarcinoma cell sample is_a: FF:0101555 ! endometrial cancer cell line sample [Term] id: FF:10646-109A7 name: squamous cell carcinoma cell line:JHUS-nk1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102024 ! squamous cell carcinoma cell line sample [Term] id: FF:10647-109A8 name: lens epithelial cell line:SRA 01/04, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103071 ! HLEC-SRA 01/04 cell sample relationship: derives_from CL:0002224 ! lens epithelial cell [Term] id: FF:10648-109A9 name: mucinous adenocarcinoma cell line:JHOM-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102788 ! mucinous adenocarcinoma cell sample [Term] id: FF:10663-109C6 name: neuroectodermal tumor cell line:FU-RPNT-2, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100669 ! embryonic cell line sample relationship: derives_from UBERON:0002346 ! neurectoderm relationship: is_model_for DOID:171 ! neuroectodermal tumor [Term] id: FF:10684-109E9 name: myxofibrosarcoma cell line:NMFH-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100460 ! fibrosarcoma cell line sample relationship: derives_from CL:0002620 ! skin fibroblast relationship: is_model_for DOID:1907 ! malignant fibroxanthoma [Term] id: FF:10686-109F2 name: bone marrow stromal cell line:StromaNKtert, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103296 ! bone marrow stromal cell line sample [Term] id: FF:10687-109F3 name: Krukenberg tumor cell line:HSKTC, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000003 ! cell line sample is_a: FF:0000210 ! human sample relationship: is_model_for DOID:9597 ! Krukenberg carcinoma [Term] id: FF:10688-109F4 name: glassy cell carcinoma cell line:HOKUG, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample [Term] id: FF:10689-109F5 name: mixed mullerian tumor cell line:HTMMT, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000003 ! cell line sample is_a: FF:0000210 ! human sample relationship: derives_from UBERON:0003134 ! female reproductive organ relationship: is_model_for DOID:4236 ! carcinosarcoma [Term] id: FF:10691-109F7 name: meningioma cell line:HKBMM, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101120 ! epithelial cell line sample is_a: FF:0104398 ! meningioma cell line sample relationship: derives_from CL:0002379 ! meningothelial cell [Term] id: FF:10692-109F8 name: large cell non-keratinizing squamous carcinoma cell line:SKG-II-SF, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102202 ! lung squamous cell carcinoma cell line sample is_a: FF:0102205 ! large cell lung cancer cell line sample [Term] id: FF:10693-109F9 name: serous cystadenocarcinoma cell line:HTOA, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0104511 ! serous cystadenocarcinoma cell sample [Term] id: FF:10694-109G1 name: tridermal teratoma cell line:HGRT, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000003 ! cell line sample is_a: FF:0000210 ! human sample relationship: is_model_for DOID:3307 ! teratoma [Term] id: FF:10695-109G2 name: sacrococcigeal teratoma cell line:HTST, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000003 ! cell line sample is_a: FF:0000210 ! human sample relationship: is_model_for DOID:3307 ! teratoma [Term] id: FF:10696-109G3 name: mesodermal tumor cell line:HIRS-BM, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100669 ! embryonic cell line sample relationship: derives_from CL:0000222 ! mesodermal cell [Term] id: FF:10697-109G4 name: peripheral neuroectodermal tumor cell line:KU-SN, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100669 ! embryonic cell line sample relationship: derives_from UBERON:0002346 ! neurectoderm relationship: is_model_for DOID:171 ! neuroectodermal tumor [Term] id: FF:10698-109G5 name: pancreatic carcinoma cell line:NOR-P1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103533 ! NOR-P1 cell sample relationship: is_model_for DOID:1798 ! pancreatic endocrine carcinoma [Term] id: FF:10699-109G6 name: acute myeloid leukemia (FAB M7) cell line:M-MOK, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample relationship: is_model_for DOID:9119 ! acute myeloid leukemia [Term] id: FF:10700-109G7 name: chondrosarcoma cell line:SW 1353, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102003 ! SW-1353 cell sample [Term] id: FF:10702-109G9 name: basal cell carcinoma cell line:TE 354.T, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample relationship: derives_from UBERON:0000014 ! zone of skin relationship: is_model_for DOID:2513 ! basal cell carcinoma [Term] id: FF:10703-109H1 name: carcinoid cell line:NCI-H1770, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100729 ! carcinoid cell sample is_a: FF:0103764 ! NCI cell sample [Term] id: FF:10704-109H2 name: osteoclastoma cell line:Hs 706.T, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100969 ! osteoclastoma cell sample [Term] id: FF:10705-109H3 name: Ewing's sarcoma cell line:Hs 863.T, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0104201 ! Ewing's sarcoma cell line sample relationship: is_model_for DOID:3369 ! peripheral primitive neuroectodermal tumor [Term] id: FF:10706-109H4 name: pleomorphic hepatocellular carcinoma cell line:SNU-387, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103191 ! SNU-387 cell sample relationship: is_model_for DOID:5662 ! pleomorphic carcinoma [Term] id: FF:10707-109H5 name: transitional cell carcinoma cell line:Hs 769.T, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102869 ! transitional cell carcinoma cell line sample relationship: is_model_for DOID:2671 ! transitional cell carcinoma [Term] id: FF:10708-109H6 name: alveolar cell carcinoma cell line:SW 1573, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102060 ! bronchioalveolar carcinoma cell sample is_a: FF:0104802 ! bronchioloalveolar carcinoma cell sample [Term] id: FF:10709-109H7 name: bronchioalveolar carcinoma cell line:NCI-H358, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102060 ! bronchioalveolar carcinoma cell sample is_a: FF:0102835 ! NCI-H358 cell sample is_a: FF:0104802 ! bronchioloalveolar carcinoma cell sample [Term] id: FF:10710-109H8 name: bronchogenic carcinoma cell line:ChaGo-K-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102061 ! bronchogenic carcinoma cell sample [Term] id: FF:10711-109H9 name: fibrous histiocytoma cell line:GCT TIB-223, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103766 ! giant cell tumor cell line sample [Term] id: FF:10712-109I1 name: hairy cell leukemia cell line:Mo, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101014 ! Mo-T cell sample [Term] id: FF:10717-109I6 name: acantholytic squamous carcinoma cell line:HCC1806, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102024 ! squamous cell carcinoma cell line sample [Term] id: FF:10718-109I7 name: biphenotypic B myelomonocytic leukemia cell line:MV-4-11, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100740 ! myeloid leukemia cell line sample is_a: FF:0100741 ! lymphocytic leukemia cell line sample [Term] id: FF:10719-109I8 name: carcinoid cell line:SK-PN-DW, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100729 ! carcinoid cell sample [Term] id: FF:10721-110A1 name: leiomyoblastoma cell line:G-402, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100678 ! G-402 cell sample [Term] id: FF:10722-110A2 name: leiomyosarcoma cell line:Hs 5.T, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102595 ! leiomyosarcoma cell line sample relationship: is_model_for DOID:1967 ! leiomyosarcoma [Term] id: FF:10723-110A3 name: pharyngeal carcinoma cell line:Detroit 562, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100834 ! Detroit 562 cell sample [Term] id: FF:10726-110A6 name: liposarcoma cell line:SW 872, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103743 ! SW-872 cell sample [Term] id: FF:10727-110A7 name: lymphangiectasia cell line:DS-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000003 ! cell line sample is_a: FF:0000210 ! human sample relationship: derives_from UBERON:0000055 ! vessel relationship: is_model_for DOID:4 ! disease [Term] id: FF:10728-110A8 name: neuroepithelioma cell line:SK-N-MC, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102914 ! SK-N-MC cell sample relationship: is_model_for DOID:962 ! neurofibroma [Term] id: FF:10729-110A9 name: neurofibroma cell line:Hs 53.T, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103046 ! neurofibroma cell sample [Term] id: FF:10730-110B1 name: non-small cell lung cancer cell line:NCI-H1385, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100161 ! lung fibroblast cell line sample is_a: FF:0102553 ! non-small cell lung cancer cell line sample is_a: FF:0103764 ! NCI cell sample relationship: derives_from CL:0002553 ! lung fibroblast [Term] id: FF:10732-110B3 name: pagetoid sarcoma cell line:Hs 925.T, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100400 ! sarcoma cell line sample [Term] id: FF:10737-110B8 name: spindle cell sarcoma cell line:Hs 132.T, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100400 ! sarcoma cell line sample relationship: is_model_for DOID:4235 ! spindle cell sarcoma [Term] id: FF:10744-110C6 name: mycosis fungoides, T cell lymphoma cell line:HuT 102 TIB-162, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103212 ! T-lymphoma cell line sample relationship: is_model_for DOID:8691 ! mycosis fungoides [Term] id: FF:10752-110D5 name: leukemia, chronic megakaryoblastic cell line:MEG-01, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102581 ! MEG-01 cell sample [Term] id: FF:10758-110E2 name: fibrosarcoma cell line:HT-1080, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101282 ! HT-1080 cell sample [Term] id: FF:10759-110E3 name: medulloblastoma cell line:ONS-76, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101359 ! medulloblastoma cell line sample [Term] id: FF:10760-110E4 name: bronchial squamous cell carcinoma cell line:KNS-62, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102024 ! squamous cell carcinoma cell line sample [Term] id: FF:10764-110E8 name: acute myeloid leukemia (FAB M5) cell line:NOMO-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10765-110E9 name: acute myeloid leukemia (FAB M2) cell line:NKM-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10766-110F1 name: chronic myelogenous leukemia (CML) cell line:MEG-A2, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100740 ! myeloid leukemia cell line sample relationship: is_model_for DOID:8552 ! chronic myeloid leukemia [Term] id: FF:10770-110F5 name: acute myeloid leukemia (FAB M5) cell line:P31/FUJ, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10772-110F7 name: myelodysplastic syndrome cell line:SKM-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000003 ! cell line sample is_a: FF:0000210 ! human sample relationship: is_model_for DOID:225 ! syndrome relationship: is_model_for DOID:74 ! hematopoietic system disease [Term] id: FF:10774-110F9 name: neuroectodermal tumor cell line:TASK1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100669 ! embryonic cell line sample relationship: derives_from UBERON:0002346 ! neurectoderm relationship: is_model_for DOID:171 ! neuroectodermal tumor [Term] id: FF:10775-110G1 name: lymphoma, malignant, hairy B-cell cell line:MLMA, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101518 ! B-lymphoma cell line sample [Term] id: FF:10777-110G3 name: NK T cell leukemia cell line:KHYG-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102504 ! T-lymphoblastic leukemia cell line sample relationship: derives_from CL:0000814 ! mature NK T cell [Term] id: FF:10778-110G4 name: hepatic mesenchymal tumor cell line:LI90, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101533 ! gastrointestinal cancer cell sample is_a: FF:0103519 ! LI90 cell sample relationship: is_model_for DOID:3350 ! mesenchymal cell neoplasm relationship: is_model_for DOID:3571 ! liver cancer [Term] id: FF:10781-110G7 name: somatostatinoma cell line:QGP-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101120 ! epithelial cell line sample relationship: derives_from CL:0000173 ! pancreatic D cell relationship: is_model_for DOID:4430 ! somatostatinoma [Term] id: FF:10782-110G8 name: liposarcoma cell line:KMLS-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103744 ! liposarcoma cell line sample [Term] id: FF:10783-110G9 name: thyroid carcinoma cell line:TCO-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101610 ! thyroid cancer cell line sample [Term] id: FF:10784-110H1 name: mucinous cystadenocarcinoma cell line:MCAS, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0104883 ! cystadenocarcinoma cell line sample relationship: derives_from UBERON:0000344 ! mucosa relationship: is_model_for DOID:3603 ! mucinous cystadenocarcinoma [Term] id: FF:10785-110H2 name: choriocarcinoma cell line:SCH, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101575 ! choriocarcinoma cell line sample [Term] id: FF:10786-110H3 name: testicular germ cell embryonal carcinoma cell line:ITO-II, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100306 ! teratocarcinoma cell line sample is_a: FF:0100669 ! embryonic cell line sample is_a: FF:0101560 ! testicular cancer cell line sample relationship: derives_from CL:0000586 ! germ cell relationship: derives_from UBERON:0000922 ! embryo relationship: is_model_for DOID:3095 ! germ cell and embryonal cancer [Term] id: FF:10787-110H4 name: rhabdomyosarcoma cell line:KYM-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102267 ! rhabdomyosarcoma cell line sample [Term] id: FF:10788-110H5 name: acute myeloid leukemia (FAB M2) cell line:Kasumi-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10789-110H6 name: acute myeloid leukemia (FAB M0) cell line:Kasumi-3, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10790-110H7 name: teratocarcinoma cell line:NCC-IT-A3, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100306 ! teratocarcinoma cell line sample [Term] id: FF:10791-110H8 name: keratoacanthoma cell line:HKA-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000003 ! cell line sample is_a: FF:0000210 ! human sample relationship: derives_from UBERON:0000014 ! zone of skin relationship: is_model_for DOID:3149 ! keratoacanthoma [Term] id: FF:10792-110H9 name: acute myeloid leukemia (FAB M2) cell line:Kasumi-6, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10795-110I3 name: anaplastic large cell lymphoma cell line:Ki-JK, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103212 ! T-lymphoma cell line sample is_a: FF:0104868 ! anaplastic large cell lymphoma cell line sample relationship: derives_from CL:0000084 ! T cell [Term] id: FF:10796-110I4 name: adenocarcinoma cell line:IM95m, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100167 ! adenocarcinoma cell line sample [Term] id: FF:10797-110I5 name: tubular adenocarcinoma cell line:SUIT-2, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100167 ! adenocarcinoma cell line sample is_a: FF:0103493 ! SUIT-2 cell sample relationship: derives_from CL:0000083 ! epithelial cell of pancreas relationship: is_model_for DOID:4929 ! tubular adenocarcinoma [Term] id: FF:10798-110I6 name: teratocarcinoma cell line:NCR-G1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100306 ! teratocarcinoma cell line sample [Term] id: FF:10800-110I8 name: small cell cervical cancer cell line:HCSC-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101967 ! cervical cancer cell line sample [Term] id: FF:10801-110I9 name: chronic myeloblastic leukemia (CML) cell line:KCL-22, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0104137 ! KCL-22 cell sample [Term] id: FF:10802-111A1 name: acute myeloid leukemia (FAB M7) cell line:MKPL-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10805-111A4 name: anaplastic squamous cell carcinoma cell line:RPMI 2650, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0104205 ! RPMI-2650 cell sample [Term] id: FF:10807-111A6 name: teratocarcinoma cell line:PA-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100306 ! teratocarcinoma cell line sample is_a: FF:0101591 ! PA-1 cell sample [Term] id: FF:10808-111A7 name: hereditary spherocytic anemia cell line:WIL2-NS, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101524 ! WIL2-NS cell sample relationship: is_model_for DOID:2355 ! anemia [Term] id: FF:10809-111A8 name: Wilms' tumor cell line:G-401, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102586 ! G-401 cell sample [Term] id: FF:10810-111A9 name: adrenal cortex adenocarcinoma cell line:SW-13, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100167 ! adenocarcinoma cell line sample relationship: derives_from UBERON:0001235 ! adrenal cortex relationship: is_model_for DOID:7 ! disease of anatomical entity [Term] id: FF:10812-111B2 name: normal intestinal epithelial cell line:FHs 74 Int, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100003 ! intestinal cell line sample is_a: FF:0101120 ! epithelial cell line sample relationship: derives_from CL:0002563 ! intestinal epithelial cell [Term] id: FF:10813-111B3 name: normal embryonic palatal mesenchymal cell line:HEPM, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100669 ! embryonic cell line sample relationship: derives_from CL:0000134 ! mesenchymal cell relationship: derives_from UBERON:0005705 ! primary palate mesenchyme [Term] id: FF:10815-111B5 name: epitheloid carcinoma cell line: HelaS3 ENCODE, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011472 ! human epitheloid carcinoma cell line: HelaS3 ENCODE sample [Term] id: FF:10816-111B6 name: epitheloid carcinoma cell line: HelaS3 ENCODE, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011472 ! human epitheloid carcinoma cell line: HelaS3 ENCODE sample [Term] id: FF:10817-111B7 name: epitheloid carcinoma cell line: HelaS3 ENCODE, rep3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011472 ! human epitheloid carcinoma cell line: HelaS3 ENCODE sample [Term] id: FF:10818-111B8 name: hepatocellular carcinoma cell line: HepG2 ENCODE, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100599 ! Hep-G2 cell sample [Term] id: FF:10819-111B9 name: hepatocellular carcinoma cell line: HepG2 ENCODE, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100599 ! Hep-G2 cell sample [Term] id: FF:10820-111C1 name: hepatocellular carcinoma cell line: HepG2 ENCODE, rep3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100599 ! Hep-G2 cell sample [Term] id: FF:10821-111C2 name: B lymphoblastoid cell line: GM12878 ENCODE, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102062 ! B-lymphoblastoid cell line sample [Term] id: FF:10822-111C3 name: B lymphoblastoid cell line: GM12878 ENCODE, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102062 ! B-lymphoblastoid cell line sample [Term] id: FF:10823-111C4 name: B lymphoblastoid cell line: GM12878 ENCODE, rep3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102062 ! B-lymphoblastoid cell line sample [Term] id: FF:10824-111C5 name: chronic myelogenous leukemia cell line:K562 ENCODE, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100664 ! K-562 cell sample [Term] id: FF:10825-111C6 name: chronic myelogenous leukemia cell line:K562 ENCODE, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100664 ! K-562 cell sample [Term] id: FF:10826-111C7 name: chronic myelogenous leukemia cell line:K562 ENCODE, rep3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100664 ! K-562 cell sample [Term] id: FF:10827-111C8 name: acute myeloid leukemia (FAB M0) cell line:KG-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10828-111C9 name: acute myeloid leukemia (FAB M1) cell line:HYT-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10829-111D1 name: acute myeloid leukemia (FAB M3) cell line:HL60, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10830-111D2 name: acute myeloid leukemia (FAB M4) cell line:FKH-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10831-111D3 name: acute myeloid leukemia (FAB M4) cell line:HNT-34, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10832-111D4 name: acute myeloid leukemia (FAB M4eo) cell line:EoL-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10833-111D5 name: acute myeloid leukemia (FAB M4eo) cell line:EoL-3, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10834-111D6 name: acute myeloid leukemia (FAB M5) cell line:U-937 DE-4, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10835-111D7 name: acute myeloid leukemia (FAB M6) cell line:EEB, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10836-111D8 name: acute myeloid leukemia (FAB M6) cell line:F-36E, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10837-111D9 name: acute myeloid leukemia (FAB M6) cell line:F-36P, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101883 ! acute myeloid leukemia cell line sample [Term] id: FF:10838-111E1 name: medulloblastoma cell line:D283 Med, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0101359 ! medulloblastoma cell line sample [Term] id: FF:10839-111E2 name: large cell lung carcinoma cell line:NCI-H460, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102207 ! NCI-H460 cell sample [Term] id: FF:10840-111E3 name: plasma cell leukemia cell line:ARH-77, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102992 ! ARH-77 cell sample relationship: derives_from CL:0000786 ! plasma cell [Term] id: FF:10841-111E4 name: small cell lung carcinoma cell line:DMS 144, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100189 ! small cell lung cancer cell sample [Term] id: FF:10842-111E5 name: small cell lung carcinoma cell line:NCI-H82, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100189 ! small cell lung cancer cell sample is_a: FF:0103026 ! NCI-H82 cell sample [Term] id: FF:10843-111E6 name: merkel cell carcinoma cell line:MKL-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample relationship: derives_from CL:0000242 ! Merkel cell [Term] id: FF:10844-111E7 name: merkel cell carcinoma cell line:MS-1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0100297 ! carcinoma cell line sample relationship: derives_from CL:0000242 ! Merkel cell [Term] id: FF:10845-111E8 name: mesothelioma cell line:NCI-H28, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample is_a: FF:0103764 ! NCI cell sample [Term] id: FF:10846-111E9 name: mesothelioma cell line:NCI-H226, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample is_a: FF:0103008 ! NCI-H226 cell sample [Term] id: FF:10847-111F1 name: mesothelioma cell line:NCI-H2052, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample is_a: FF:0103764 ! NCI cell sample [Term] id: FF:10848-111F2 name: mesothelioma cell line:NCI-H2452, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample is_a: FF:0103764 ! NCI cell sample [Term] id: FF:10849-111F3 name: mesothelioma cell line:Mero-14, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample [Term] id: FF:10850-111F4 name: mesothelioma cell line:Mero-25, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample [Term] id: FF:10851-111F5 name: mesothelioma cell line:Mero-41, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample [Term] id: FF:10852-111F6 name: mesothelioma cell line:Mero-48a, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample [Term] id: FF:10853-111F7 name: mesothelioma cell line:Mero-82, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample [Term] id: FF:10854-111F8 name: mesothelioma cell line:Mero-83, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample [Term] id: FF:10855-111F9 name: mesothelioma cell line:Mero-84, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample [Term] id: FF:10856-111G1 name: mesothelioma cell line:Mero-95, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample [Term] id: FF:10857-111G2 name: mesothelioma cell line:No36, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample [Term] id: FF:10858-111G3 name: mesothelioma cell line:ONE58, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0102424 ! mesothelioma cell line sample [Term] id: FF:11207-116A1 name: Endothelial Cells - Aortic, donor0 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000048 ! human endothelial cell of the aorta sample [Term] id: FF:11210-116A4 name: Smooth Muscle Cells - Aortic, donor0 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000168 ! human aortic smooth muscle cell sample [Term] id: FF:11212-116A6 name: Smooth Muscle Cells - Umbilical artery, donor0 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000176 ! human smooth muscle cell of umbilical artery sample [Term] id: FF:11214-116A8 name: Mesenchymal stem cell - umbilical, donor0 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000094 ! human mesenchymal stem cell of umbilical cord-Sciencell sample [Term] id: FF:11215-116A9 name: Retinal Pigment Epithelial Cells, donor0 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000158 ! human retinal pigment epithelial cell sample [Term] id: FF:11216-116B1 name: Urothelial cells, donor0 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000191 ! human urothelial cell sample [Term] id: FF:11217-116B2 name: Mesenchymal stem cell - adipose, donor0 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000096 ! human mesenchymal stem cell of adipose sample [Term] id: FF:11218-116B3 name: Mesenchymal stem cell - hepatic, donor0 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000098 ! human hepatic mesenchymal stem cell sample [Term] id: FF:11219-116B4 name: Mesenchymal Stem Cells - Vertebral, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000093 ! human vertebral mesenchymal stem cell sample [Term] id: FF:11220-116B5 name: Sebocyte, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000160 ! human sebocyte sample [Term] id: FF:11221-116B6 name: Gingival epithelial cells, donor1 (GEA11) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000254 ! human gingival epithelial cell sample [Term] id: FF:11222-116B7 name: Fibroblast - Gingival, donor4 (GFH2) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000063 ! human fibroblast of gingiva sample [Term] id: FF:11223-116B8 name: Fibroblast - Periodontal Ligament, donor4 (PL29) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000067 ! human fibroblast of periodontium sample [Term] id: FF:11224-116B9 name: CD14-positive Monocytes, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000024 ! human CD14-positive monocyte sample [Term] id: FF:11225-116C1 name: CD4-positive T Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000031 ! CD4-positive T cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11226-116C2 name: CD8-positive T Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000030 ! CD8-positive T cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11227-116C3 name: Dendritic Cells - monocyte immature derived, donor1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000044 ! human monocyte immature derived dendritic cell sample [Term] id: FF:11228-116C4 name: Dendritic Cells - plasmacytoid, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000044 ! human monocyte immature derived dendritic cell sample is_a: FF:0000045 ! human plasmacytoid dendritic cell sample [Term] id: FF:11229-116C5 name: CD14+ monocyte derived endothelial progenitor cells, donor1 namespace: FANTOM5 comment: Previously: Endothelial Progenitor Cells, donor1 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000248 ! human endothelial progenitor cell sample relationship: derives_from CL:0000576 ! monocyte [Term] id: FF:11230-116C6 name: Natural Killer Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000119 ! human natural killer cell sample [Term] id: FF:11231-116C7 name: Peripheral Blood Mononuclear Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000135 ! human peripheral blood mononuclear cell sample [Term] id: FF:11232-116C8 name: Macrophage - monocyte derived, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000086 ! human macrophage sample [Term] id: FF:11233-116C9 name: Neutrophils, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000122 ! human neutrophil sample [Term] id: FF:11234-116D1 name: Smooth Muscle Cells - Brain Vascular, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000170 ! human smooth muscle cell of the brain vasculature sample [Term] id: FF:11235-116D2 name: Astrocyte - cerebral cortex, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000194 ! human astrocyte of the cerebral cortex sample [Term] id: FF:11236-116D3 name: Endothelial Cells - Lymphatic, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000049 ! human lymphatic endothelial cell sample [Term] id: FF:11237-116D4 name: Fibroblast - Gingival, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000063 ! human fibroblast of gingiva sample [Term] id: FF:11238-116D5 name: Fibroblast - Periodontal Ligament, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000067 ! human fibroblast of periodontium sample [Term] id: FF:11239-116D6 name: Smooth Muscle Cells - Colonic, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000181 ! human smooth muscle of colon sample [Term] id: FF:11240-116D7 name: Skeletal Muscle Satellite Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000165 ! human skeletal muscle satellite cell sample [Term] id: FF:11241-116D8 name: Myoblast, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000164 ! human skeletal muscle myoblast sample [Term] id: FF:11242-116D9 name: Ciliary Epithelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000040 ! human ciliary epithelial cell sample [Term] id: FF:11243-116E1 name: Endothelial Cells - Umbilical vein, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000247 ! human endothelial cell of umbilical vein sample [Term] id: FF:11245-116E3 name: Fibroblast - Aortic Adventitial, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000058 ! human fibroblast of the aortic adventitia sample [Term] id: FF:11246-116E4 name: Intestinal epithelial cells (polarized), donor1 namespace: FANTOM5 comment: Previously: Intestinal epithelial cells, donor1 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000080 ! human intestinal epithelial cell sample [Term] id: FF:11247-116E5 name: Mesothelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000099 ! human mesothelial cell sample [Term] id: FF:11248-116E6 name: Anulus Pulposus Cell, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000192 ! human anulus pulposus cell sample [Term] id: FF:11249-116E7 name: Pancreatic stromal cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000146 ! human stromal cell of pancreas sample [Term] id: FF:11250-116E8 name: Fibroblast - Pulmonary Artery, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000068 ! human fibroblast of pulmonary artery sample [Term] id: FF:11251-116E9 name: Keratinocyte - oral, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000083 ! human oral mucosa keratinocyte sample [Term] id: FF:11252-116F1 name: Nucleus Pulposus Cell, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000123 ! human nucleus pulposus cell of intervertebral disc sample [Term] id: FF:11253-116F2 name: Prostate Epithelial Cells (polarized), donor1 namespace: FANTOM5 comment: Previously: Prostate Epithelial Cells, donor1 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000145 ! human prostate epithelial cell sample [Term] id: FF:11254-116F3 name: Prostate Stromal Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000277 ! human prostate stromal cell sample [Term] id: FF:11255-116F4 name: Sertoli Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000161 ! human sertoli cell sample [Term] id: FF:11256-116F5 name: Small Airway Epithelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000166 ! human small airway epithelial cell sample [Term] id: FF:11257-116F6 name: Smooth Muscle Cells - Prostate, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000183 ! human smooth muscle cell of prostate sample [Term] id: FF:11258-116F7 name: Smooth Muscle Cells - Uterine, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000185 ! human uterine smooth muscle cell sample [Term] id: FF:11259-116F8 name: Adipocyte - subcutaneous, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000011 ! human subcutaneous adipocyte sample [Term] id: FF:11261-116G1 name: Chondrocyte - de diff, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000246 ! human chondrocyte de-differentiated sample [Term] id: FF:11263-116G3 name: Endothelial Cells - Aortic, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000048 ! human endothelial cell of the aorta sample [Term] id: FF:11264-116G4 name: Endothelial Cells - Artery, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000047 ! human endothelial cell of the artery sample [Term] id: FF:11265-116G5 name: Endothelial Cells - Microvascular, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000050 ! human microvascular endothelial cell sample [Term] id: FF:11266-116G6 name: Endothelial Cells - Thoracic, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000051 ! human thoracic endothelial cell sample [Term] id: FF:11267-116G7 name: Endothelial Cells - Vein, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000052 ! human endothelial cell of the vein sample [Term] id: FF:11268-116G8 name: Fibroblast - Cardiac, donor1 namespace: FANTOM5 def: "A fibroblast from cardiac tissue." [GOC:tfm] subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000059 ! human cardiac fibroblast sample [Term] id: FF:11269-116G9 name: Fibroblast - Dermal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000062 ! human dermal fibroblast sample [Term] id: FF:11270-116H1 name: Fibroblast - Lung, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000064 ! human fibroblast of lung sample [Term] id: FF:11271-116H2 name: Hair Follicle Dermal Papilla Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000071 ! human hair follicle dermal papilla cell sample [Term] id: FF:11272-116H3 name: Keratinocyte - epidermal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000082 ! human epidermal keratinocyte sample [Term] id: FF:11273-116H4 name: Mammary Epithelial Cell, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000088 ! human mammary epithelial cell sample [Term] id: FF:11274-116H5 name: Melanocyte - light, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000090 ! human light melanocyte sample [Term] id: FF:11275-116H6 name: Neural stem cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000120 ! human neural stem cell sample [Term] id: FF:11276-116H7 name: Osteoblast - differentiated, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000127 ! human osteoblast-Sciencell sample is_a: FF:0000128 ! human osteoblast-Cell applications sample [Term] id: FF:11277-116H8 name: Osteoblast, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000127 ! human osteoblast-Sciencell sample is_a: FF:0000128 ! human osteoblast-Cell applications sample [Term] id: FF:11278-116H9 name: Placental Epithelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000136 ! human placental epithelial cell sample [Term] id: FF:11279-116I1 name: Preadipocyte - subcutaneous, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000142 ! human subcutaneous preadipocyte sample [Term] id: FF:11280-116I2 name: Preadipocyte - visceral, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000143 ! human visceral preadipocyte sample [Term] id: FF:11281-116I3 name: Skeletal Muscle Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000162 ! human skeletal muscle cell sample [Term] id: FF:11282-116I4 name: Skeletal muscle cells differentiated into Myotubes - multinucleated, donor1 namespace: FANTOM5 def: "Skeletal muscle cells derived from myotubules." [GOC:tfm] subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0104975 ! human myotube cell sample [Term] id: FF:11283-116I5 name: Smooth Muscle Cells - Aortic, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000168 ! human aortic smooth muscle cell sample [Term] id: FF:11284-116I6 name: Smooth Muscle Cells - Brachiocephalic, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000169 ! human smooth muscle cell of the brachiocephalic vasculature sample [Term] id: FF:11285-116I7 name: Smooth Muscle Cells - Carotid, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000171 ! human smooth muscle cell of the carotid artery sample [Term] id: FF:11286-116I8 name: Smooth Muscle Cells - Coronary Artery, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000172 ! human smooth muscle cell of coronary artery sample [Term] id: FF:11287-116I9 name: Smooth Muscle Cells - Internal Thoracic Artery, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000173 ! human smooth muscle cell of the internal thoracic artery sample [Term] id: FF:11288-117A1 name: Smooth Muscle Cells - Pulmonary Artery, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000174 ! human smooth muscle cell of pulmonary artery sample [Term] id: FF:11289-117A2 name: Smooth Muscle Cells - Subclavian Artery, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000175 ! human smooth muscle cell of subclavian artery sample [Term] id: FF:11290-117A3 name: Smooth Muscle Cells - Umbilical Artery, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000167 ! smooth muscle cell sample is_a: FF:0000176 ! human smooth muscle cell of umbilical artery sample relationship: derives_from CL:0002594 ! smooth muscle cell of the umbilical artery [Term] id: FF:11291-117A4 name: Synoviocyte, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000187 ! human synovial cell sample [Term] id: FF:11292-117A5 name: Tracheal Epithelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000189 ! human tracheal epithelial cell sample [Term] id: FF:11299-117B3 name: Mouse Aortic Smooth Muscle cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000104 ! mouse aortic smooth muscle cell sample [Term] id: FF:11301-117B5 name: Sebocyte, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000160 ! human sebocyte sample [Term] id: FF:11302-117B6 name: Gingival epithelial cells, donor2 (GEA14) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000254 ! human gingival epithelial cell sample [Term] id: FF:11303-117B7 name: Fibroblast - Gingival, donor5 (GFH3) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000063 ! human fibroblast of gingiva sample [Term] id: FF:11304-117B8 name: Fibroblast - Periodontal Ligament, donor5 (PL30) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000067 ! human fibroblast of periodontium sample [Term] id: FF:11305-117B9 name: CD14-positive Monocytes, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000024 ! human CD14-positive monocyte sample [Term] id: FF:11306-117C1 name: CD4-positive T Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000031 ! CD4-positive T cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11307-117C2 name: CD8-positive T Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000030 ! CD8-positive T cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11308-117C3 name: Dendritic Cells - monocyte immature derived, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000044 ! human monocyte immature derived dendritic cell sample [Term] id: FF:11309-117C4 name: Dendritic Cells - plasmacytoid, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000045 ! human plasmacytoid dendritic cell sample [Term] id: FF:11310-117C5 name: CD14+ monocyte derived endothelial progenitor cells, donor2 namespace: FANTOM5 comment: Previously Endothelial Progenitor Cells, donor2 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000248 ! human endothelial progenitor cell sample relationship: derives_from CL:0000576 ! monocyte [Term] id: FF:11311-117C6 name: Natural Killer Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000119 ! human natural killer cell sample [Term] id: FF:11312-117C7 name: Peripheral Blood Mononuclear Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000135 ! human peripheral blood mononuclear cell sample [Term] id: FF:11313-117C8 name: Macrophage - monocyte derived, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000086 ! human macrophage sample [Term] id: FF:11314-117C9 name: Neutrophils, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000122 ! human neutrophil sample [Term] id: FF:11315-117D1 name: Smooth Muscle Cells - Brain Vascular, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000170 ! human smooth muscle cell of the brain vasculature sample [Term] id: FF:11316-117D2 name: Astrocyte - cerebral cortex, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000194 ! human astrocyte of the cerebral cortex sample [Term] id: FF:11317-117D3 name: Endothelial Cells - Lymphatic, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000049 ! human lymphatic endothelial cell sample [Term] id: FF:11318-117D4 name: Fibroblast - Gingival, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000063 ! human fibroblast of gingiva sample [Term] id: FF:11319-117D5 name: Fibroblast - Periodontal Ligament, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000067 ! human fibroblast of periodontium sample [Term] id: FF:11320-117D6 name: Smooth Muscle Cells - Colonic, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000181 ! human smooth muscle of colon sample [Term] id: FF:11321-117D7 name: Skeletal Muscle Satellite Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000165 ! human skeletal muscle satellite cell sample [Term] id: FF:11322-117D8 name: Myoblast, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000164 ! human skeletal muscle myoblast sample [Term] id: FF:11323-117D9 name: Ciliary Epithelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000040 ! human ciliary epithelial cell sample [Term] id: FF:11324-117E1 name: Endothelial Cells - Umbilical vein, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000247 ! human endothelial cell of umbilical vein sample [Term] id: FF:11326-117E3 name: Fibroblast - Aortic Adventitial, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000058 ! human fibroblast of the aortic adventitia sample [Term] id: FF:11327-117E4 name: Adipocyte - breast, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000156 ! human adipocyte of breast sample [Term] id: FF:11328-117E5 name: Preadipocyte - breast, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000139 ! human preadipocyte of the breast sample [Term] id: FF:11329-117E6 name: Preadipocyte - omental, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000140 ! human omentum preadipocyte sample [Term] id: FF:11331-117E8 name: Prostate Epithelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000145 ! human prostate epithelial cell sample [Term] id: FF:11332-117E9 name: Prostate Stromal Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000277 ! human prostate stromal cell sample [Term] id: FF:11333-117F1 name: Sertoli Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000161 ! human sertoli cell sample [Term] id: FF:11334-117F2 name: Small Airway Epithelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000166 ! human small airway epithelial cell sample [Term] id: FF:11335-117F3 name: Smooth Muscle Cells - Prostate, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000183 ! human smooth muscle cell of prostate sample [Term] id: FF:11336-117F4 name: Adipocyte - subcutaneous, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000011 ! human subcutaneous adipocyte sample [Term] id: FF:11338-117F6 name: Chondrocyte - de diff, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000246 ! human chondrocyte de-differentiated sample [Term] id: FF:11339-117F7 name: Chondrocyte - re diff, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000245 ! human chondrocyte re-differentiated sample [Term] id: FF:11340-117F8 name: Endothelial Cells - Aortic, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000048 ! human endothelial cell of the aorta sample [Term] id: FF:11341-117F9 name: Endothelial Cells - Artery, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000047 ! human endothelial cell of the artery sample [Term] id: FF:11342-117G1 name: Endothelial Cells - Microvascular, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000050 ! human microvascular endothelial cell sample [Term] id: FF:11343-117G2 name: Endothelial Cells - Thoracic, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000051 ! human thoracic endothelial cell sample [Term] id: FF:11344-117G3 name: Endothelial Cells - Vein, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000052 ! human endothelial cell of the vein sample [Term] id: FF:11345-117G4 name: Fibroblast - Cardiac, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000059 ! human cardiac fibroblast sample [Term] id: FF:11346-117G5 name: Fibroblast - Dermal, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000062 ! human dermal fibroblast sample [Term] id: FF:11347-117G6 name: Fibroblast - Lung, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000064 ! human fibroblast of lung sample [Term] id: FF:11348-117G7 name: Hair Follicle Dermal Papilla Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000071 ! human hair follicle dermal papilla cell sample [Term] id: FF:11349-117G8 name: Keratinocyte - epidermal, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000082 ! human epidermal keratinocyte sample [Term] id: FF:11350-117G9 name: Mammary Epithelial Cell, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000088 ! human mammary epithelial cell sample [Term] id: FF:11351-117H1 name: Melanocyte - light, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000090 ! human light melanocyte sample [Term] id: FF:11352-117H2 name: Neural stem cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000120 ! human neural stem cell sample [Term] id: FF:11353-117H3 name: Osteoblast - differentiated, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000127 ! human osteoblast-Sciencell sample is_a: FF:0000128 ! human osteoblast-Cell applications sample [Term] id: FF:11354-117H4 name: Osteoblast, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000127 ! human osteoblast-Sciencell sample is_a: FF:0000128 ! human osteoblast-Cell applications sample [Term] id: FF:11355-117H5 name: Placental Epithelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000136 ! human placental epithelial cell sample [Term] id: FF:11356-117H6 name: Preadipocyte - subcutaneous, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000142 ! human subcutaneous preadipocyte sample [Term] id: FF:11357-117H7 name: Preadipocyte - visceral, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000143 ! human visceral preadipocyte sample [Term] id: FF:11358-117H8 name: Skeletal Muscle Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000162 ! human skeletal muscle cell sample [Term] id: FF:11359-117H9 name: Skeletal muscle cells differentiated into Myotubes - multinucleated, donor2 namespace: FANTOM5 def: "Skeletal muscle cells derived from myotubules." [GOC:tfm] subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0104975 ! human myotube cell sample [Term] id: FF:11360-117I1 name: Smooth Muscle Cells - Aortic, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000168 ! human aortic smooth muscle cell sample [Term] id: FF:11361-117I2 name: Smooth Muscle Cells - Brachiocephalic, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000169 ! human smooth muscle cell of the brachiocephalic vasculature sample [Term] id: FF:11362-117I3 name: Smooth Muscle Cells - Carotid, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000171 ! human smooth muscle cell of the carotid artery sample [Term] id: FF:11363-117I4 name: Smooth Muscle Cells - Coronary Artery, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000172 ! human smooth muscle cell of coronary artery sample [Term] id: FF:11364-117I5 name: Smooth Muscle Cells - Internal Thoracic Artery, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000173 ! human smooth muscle cell of the internal thoracic artery sample [Term] id: FF:11365-117I6 name: Smooth Muscle Cells - Pulmonary Artery, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000174 ! human smooth muscle cell of pulmonary artery sample [Term] id: FF:11366-117I7 name: Smooth Muscle Cells - Subclavian Artery, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000175 ! human smooth muscle cell of subclavian artery sample [Term] id: FF:11367-117I8 name: Smooth Muscle Cells - Umbilical Artery, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000176 ! human smooth muscle cell of umbilical artery sample [Term] id: FF:11368-117I9 name: Synoviocyte, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000187 ! human synovial cell sample [Term] id: FF:11369-118A1 name: Tracheal Epithelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000189 ! human tracheal epithelial cell sample [Term] id: FF:11376-118A8 name: Adipocyte - breast, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000156 ! human adipocyte of breast sample [Term] id: FF:11378-118B1 name: Sebocyte, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000160 ! human sebocyte sample [Term] id: FF:11379-118B2 name: Gingival epithelial cells, donor3 (GEA15) namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000254 ! human gingival epithelial cell sample [Term] id: FF:11380-118B3 name: Fibroblast - Periodontal Ligament, donor6 (PLH3) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000067 ! human fibroblast of periodontium sample [Term] id: FF:11381-118B4 name: CD14-positive Monocytes, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000024 ! human CD14-positive monocyte sample [Term] id: FF:11382-118B5 name: CD4-positive T Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000031 ! CD4-positive T cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11383-118B6 name: CD8-positive T Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000030 ! CD8-positive T cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11384-118B7 name: Dendritic Cells - monocyte immature derived, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000044 ! human monocyte immature derived dendritic cell sample [Term] id: FF:11385-118B8 name: Dendritic Cells - plasmacytoid, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000045 ! human plasmacytoid dendritic cell sample [Term] id: FF:11386-118B9 name: CD14+ monocyte derived endothelial progenitor cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000248 ! human endothelial progenitor cell sample relationship: derives_from CL:0000576 ! monocyte [Term] id: FF:11387-118C1 name: Natural Killer Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000119 ! human natural killer cell sample [Term] id: FF:11388-118C2 name: Peripheral Blood Mononuclear Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000135 ! human peripheral blood mononuclear cell sample [Term] id: FF:11389-118C3 name: Macrophage - monocyte derived, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000086 ! human macrophage sample [Term] id: FF:11390-118C4 name: Neutrophils, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000122 ! human neutrophil sample [Term] id: FF:11391-118C5 name: Smooth Muscle Cells - Brain Vascular, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000170 ! human smooth muscle cell of the brain vasculature sample [Term] id: FF:11392-118C6 name: Astrocyte - cerebral cortex, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000194 ! human astrocyte of the cerebral cortex sample [Term] id: FF:11393-118C7 name: Endothelial Cells - Lymphatic, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000049 ! human lymphatic endothelial cell sample [Term] id: FF:11394-118C8 name: Fibroblast - Gingival, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000063 ! human fibroblast of gingiva sample [Term] id: FF:11395-118C9 name: Fibroblast - Periodontal Ligament, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000067 ! human fibroblast of periodontium sample [Term] id: FF:11396-118D1 name: Smooth Muscle Cells - Colonic, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000181 ! human smooth muscle of colon sample [Term] id: FF:11397-118D2 name: Skeletal Muscle Satellite Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000165 ! human skeletal muscle satellite cell sample [Term] id: FF:11398-118D3 name: Myoblast, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000164 ! human skeletal muscle myoblast sample [Term] id: FF:11399-118D4 name: Ciliary Epithelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000040 ! human ciliary epithelial cell sample [Term] id: FF:11400-118D5 name: Endothelial Cells - Umbilical vein, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000247 ! human endothelial cell of umbilical vein sample [Term] id: FF:11401-118D6 name: Fibroblast - Aortic Adventitial, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000058 ! human fibroblast of the aortic adventitia sample [Term] id: FF:11402-118D7 name: Mesothelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000099 ! human mesothelial cell sample [Term] id: FF:11403-118D8 name: Preadipocyte - omental, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000140 ! human omentum preadipocyte sample [Term] id: FF:11404-118D9 name: Prostate Epithelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000145 ! human prostate epithelial cell sample [Term] id: FF:11405-118E1 name: Prostate Stromal Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000277 ! human prostate stromal cell sample [Term] id: FF:11406-118E2 name: Small Airway Epithelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000166 ! human small airway epithelial cell sample [Term] id: FF:11408-118E4 name: Adipocyte - subcutaneous, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000011 ! human subcutaneous adipocyte sample [Term] id: FF:11409-118E5 name: Nucleus Pulposus Cell, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000123 ! human nucleus pulposus cell of intervertebral disc sample [Term] id: FF:11410-118E6 name: Chondrocyte - de diff, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000246 ! human chondrocyte de-differentiated sample [Term] id: FF:11411-118E7 name: Chondrocyte - re diff, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000245 ! human chondrocyte re-differentiated sample [Term] id: FF:11412-118E8 name: Endothelial Cells - Aortic, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000048 ! human endothelial cell of the aorta sample [Term] id: FF:11413-118E9 name: Endothelial Cells - Artery, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000047 ! human endothelial cell of the artery sample [Term] id: FF:11414-118F1 name: Endothelial Cells - Microvascular, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000050 ! human microvascular endothelial cell sample [Term] id: FF:11416-118F3 name: Endothelial Cells - Vein, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000052 ! human endothelial cell of the vein sample [Term] id: FF:11417-118F4 name: Fibroblast - Cardiac, donor3 namespace: FANTOM5 def: "A fibroblast from cardiac tissue." [GOC:tfm] subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000059 ! human cardiac fibroblast sample [Term] id: FF:11418-118F5 name: Fibroblast - Dermal, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000062 ! human dermal fibroblast sample [Term] id: FF:11419-118F6 name: Fibroblast - Lung, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000064 ! human fibroblast of lung sample [Term] id: FF:11420-118F7 name: Hair Follicle Dermal Papilla Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000071 ! human hair follicle dermal papilla cell sample [Term] id: FF:11421-118F8 name: Keratinocyte - epidermal, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000082 ! human epidermal keratinocyte sample [Term] id: FF:11422-118F9 name: Mammary Epithelial Cell, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000088 ! human mammary epithelial cell sample [Term] id: FF:11423-118G1 name: Melanocyte - light, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000090 ! human light melanocyte sample [Term] id: FF:11425-118G3 name: Osteoblast - differentiated, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000127 ! human osteoblast-Sciencell sample is_a: FF:0000128 ! human osteoblast-Cell applications sample [Term] id: FF:11426-118G4 name: Osteoblast, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000127 ! human osteoblast-Sciencell sample is_a: FF:0000128 ! human osteoblast-Cell applications sample [Term] id: FF:11427-118G5 name: Placental Epithelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000136 ! human placental epithelial cell sample [Term] id: FF:11428-118G6 name: Preadipocyte - subcutaneous, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000142 ! human subcutaneous preadipocyte sample [Term] id: FF:11429-118G7 name: Preadipocyte - visceral, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000143 ! human visceral preadipocyte sample [Term] id: FF:11430-118G8 name: Skeletal Muscle Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000162 ! human skeletal muscle cell sample [Term] id: FF:11431-118G9 name: Skeletal muscle cells differentiated into Myotubes - multinucleated, donor3 namespace: FANTOM5 def: "Skeletal muscle cells derived from myotubules." [GOC:tfm] subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0104975 ! human myotube cell sample [Term] id: FF:11432-118H1 name: Smooth Muscle Cells - Aortic, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000168 ! human aortic smooth muscle cell sample [Term] id: FF:11433-118H2 name: Smooth Muscle Cells - Brachiocephalic, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000169 ! human smooth muscle cell of the brachiocephalic vasculature sample [Term] id: FF:11434-118H3 name: Smooth Muscle Cells - Carotid, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000171 ! human smooth muscle cell of the carotid artery sample [Term] id: FF:11435-118H4 name: Smooth Muscle Cells - Coronary Artery, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000172 ! human smooth muscle cell of coronary artery sample [Term] id: FF:11436-118H5 name: Smooth Muscle Cells - Internal Thoracic Artery, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000173 ! human smooth muscle cell of the internal thoracic artery sample [Term] id: FF:11437-118H6 name: Smooth Muscle Cells - Pulmonary Artery, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000174 ! human smooth muscle cell of pulmonary artery sample [Term] id: FF:11438-118H7 name: Smooth Muscle Cells - Subclavian Artery, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000175 ! human smooth muscle cell of subclavian artery sample [Term] id: FF:11439-118H8 name: Smooth Muscle Cells - Umbilical Artery, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000176 ! human smooth muscle cell of umbilical artery sample [Term] id: FF:11440-118H9 name: Synoviocyte, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000187 ! human synovial cell sample [Term] id: FF:11441-118I1 name: Tracheal Epithelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000189 ! human tracheal epithelial cell sample [Term] id: FF:11450-119A1 name: Fibroblast - Dermal, donor4 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000062 ! human dermal fibroblast sample [Term] id: FF:11451-119A2 name: Skeletal Muscle Cells, donor4 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000162 ! human skeletal muscle cell sample [Term] id: FF:11452-119A3 name: Fibroblast - Cardiac, donor4 namespace: FANTOM5 def: "A fibroblast from cardiac tissue." [GOC:tfm] subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000059 ! human cardiac fibroblast sample [Term] id: FF:11453-119A4 name: Bronchial Epithelial Cell, donor4 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000015 ! human bronchial epithelial cell sample [Term] id: FF:11454-119A5 name: Fibroblast - Dermal, donor5 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000062 ! human dermal fibroblast sample [Term] id: FF:11455-119A6 name: Skeletal Muscle Cells, donor5 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000162 ! human skeletal muscle cell sample [Term] id: FF:11456-119A7 name: Fibroblast - Cardiac, donor5 namespace: FANTOM5 def: "A fibroblast from cardiac tissue." [GOC:tfm] subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000059 ! human cardiac fibroblast sample [Term] id: FF:11457-119A8 name: Bronchial Epithelial Cell, donor5 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000015 ! human bronchial epithelial cell sample [Term] id: FF:11458-119A9 name: Fibroblast - Dermal, donor6 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000062 ! human dermal fibroblast sample [Term] id: FF:11459-119B1 name: Skeletal Muscle Cells, donor6 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000162 ! human skeletal muscle cell sample [Term] id: FF:11460-119B2 name: Fibroblast - Cardiac, donor6 namespace: FANTOM5 def: "A fibroblast from cardiac tissue." [GOC:tfm] subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000059 ! human cardiac fibroblast sample [Term] id: FF:11461-119B3 name: Bronchial Epithelial Cell, donor6 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000015 ! human bronchial epithelial cell sample [Term] id: FF:11462-119B4 name: Nucleus Pulposus Cell, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000123 ! human nucleus pulposus cell of intervertebral disc sample [Term] id: FF:11463-119B5 name: Anulus Pulposus Cell, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000192 ! human anulus pulposus cell sample [Term] id: FF:11464-119B6 name: Mesenchymal Stem Cells - bone marrow, donor4 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000097 ! human mesenchymal stem cell of bone marrow sample [Term] id: FF:11465-119B7 name: Smooth Muscle Cells - Prostate, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000183 ! human smooth muscle cell of prostate sample [Term] id: FF:11466-119B8 name: Smooth Muscle Cells - Uterine, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000185 ! human uterine smooth muscle cell sample [Term] id: FF:11467-119B9 name: Preadipocyte - breast, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000139 ! human preadipocyte of the breast sample [Term] id: FF:11468-119C1 name: Preadipocyte - omental, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000140 ! human omentum preadipocyte sample [Term] id: FF:11469-119C2 name: Preadipocyte - perirenal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000141 ! human perirenal preadipocyte sample [Term] id: FF:11473-119C6 name: Adipocyte - omental, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000039 ! human adipocyte of omentum tissue sample [Term] id: FF:11474-119C7 name: Adipocyte - omental, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000039 ! human adipocyte of omentum tissue sample [Term] id: FF:11475-119C8 name: Adipocyte - omental, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000039 ! human adipocyte of omentum tissue sample [Term] id: FF:11476-119C9 name: Adipocyte - perirenal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000211 ! human perirenal adipocyte cell sample [Term] id: FF:11484-119D8 name: Mouse Aortic Smooth Muscle cells - differentiated, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000104 ! mouse aortic smooth muscle cell sample [Term] id: FF:11485-119D9 name: Mouse Aortic Smooth Muscle cells - differentiated, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000104 ! mouse aortic smooth muscle cell sample [Term] id: FF:11487-119E2 name: Mast cell - stimulated, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0000262 ! mast cell- stimulated sample [Term] id: FF:11489-119E4 name: Mouse Neurons - substantia nigra, donor4, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000208 ! mouse neuron of the substantia nigra sample [Term] id: FF:11490-119E5 name: Mouse Neurons - substantia nigra, donor5 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000208 ! mouse neuron of the substantia nigra sample [Term] id: FF:11491-119E6 name: Pericytes, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000133 ! human pericyte sample [Term] id: FF:11492-119E7 name: Fibroblast - Choroid Plexus, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000060 ! human fibroblast of choroid plexus sample [Term] id: FF:11493-119E8 name: Meningeal Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000091 ! human leptomeningeal cell sample [Term] id: FF:11494-119E9 name: Neurons, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000348 ! human neuron samples [Term] id: FF:11496-119F2 name: Oligodendrocyte - precursors, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000125 ! human oligodendrocyte precursor sample [Term] id: FF:11498-119F4 name: Schwann Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000159 ! human Schwann cell sample [Term] id: FF:11499-119F5 name: Perineurial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000134 ! human perineural cell sample [Term] id: FF:11500-119F6 name: Astrocyte - cerebellum, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000195 ! human astrocyte of the cerebellum sample [Term] id: FF:11502-119F8 name: Melanocyte - dark, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000089 ! human dark melanocyte sample [Term] id: FF:11504-119G1 name: Hair Follicle Outer Root Sheath Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000075 ! human outer root sheath cell sample [Term] id: FF:11506-119G3 name: Fibroblast - Lymphatic, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000065 ! human fibroblast of lymphatic vessel sample [Term] id: FF:11507-119G4 name: Esophageal Epithelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000056 ! human epithelial cell of esophagus sample [Term] id: FF:11508-119G5 name: Smooth Muscle Cells - Esophageal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000182 ! human esophageal smooth muscle cell sample [Term] id: FF:11509-119G6 name: Smooth Muscle Cells - Intestinal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000180 ! human smooth muscle cell of intestine sample [Term] id: FF:11510-119G7 name: Alveolar Epithelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000012 ! human alveolar epithelial cell sample [Term] id: FF:11511-119G8 name: Bronchial Epithelial Cell, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000015 ! human bronchial epithelial cell sample [Term] id: FF:11512-119G9 name: Smooth Muscle Cells - Bronchial, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000179 ! human bronchial smooth muscle cell sample is_a: FF:0000998 ! adult tissue sample [Term] id: FF:11513-119H1 name: Smooth Muscle Cells - Tracheal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000184 ! human smooth muscle cell of trachea sample [Term] id: FF:11514-119H2 name: Renal Glomerular Endothelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000153 ! human renal glomerular endothelial cell sample [Term] id: FF:11515-119H3 name: Renal Proximal Tubular Epithelial Cell, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000155 ! human renal proximal tubular epithelial cell sample [Term] id: FF:11516-119H4 name: Renal Cortical Epithelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000152 ! human renal cortical epithelial cell sample [Term] id: FF:11517-119H5 name: Renal Epithelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000151 ! human renal epithelial cell sample [Term] id: FF:11518-119H6 name: Renal Mesangial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000154 ! human renal mesangial cell sample [Term] id: FF:11519-119H7 name: Smooth Muscle Cells - Bladder, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000178 ! human smooth muscle cell of bladder sample [Term] id: FF:11520-119H8 name: Urothelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000191 ! human urothelial cell sample [Term] id: FF:11521-119H9 name: Hepatic Sinusoidal Endothelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000046 ! human endothelial cell sample is_a: FF:0000076 ! hepatic sinusoidal endothelial cell sample is_a: FF:0000078 ! human hepatocyte sample [Term] id: FF:11523-119I2 name: Hepatocyte, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000078 ! human hepatocyte sample [Term] id: FF:11524-119I3 name: Hepatic Stellate Cells (lipocyte), donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000077 ! hepatic stellate cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11525-119I4 name: Cardiac Myocyte, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000118 ! human cardiac myocyte sample [Term] id: FF:11526-119I5 name: Corneal Epithelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000043 ! human corneal epithelial cell sample [Term] id: FF:11527-119I6 name: Keratocytes, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000084 ! human keratocyte sample [Term] id: FF:11528-119I7 name: Retinal Pigment Epithelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000158 ! human retinal pigment epithelial cell sample [Term] id: FF:11529-119I8 name: Lens Epithelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000085 ! human lens epithelial cell sample [Term] id: FF:11530-119I9 name: Iris Pigment Epithelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000081 ! human iris pigment epithelial cell sample [Term] id: FF:11531-120A1 name: Fibroblast - Conjunctival, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000061 ! human fibroblast of conjuctivia sample [Term] id: FF:11532-120A2 name: Trabecular Meshwork Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000188 ! human trabecular meshwork cell sample [Term] id: FF:11533-120A3 name: Amniotic Epithelial Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000009 ! human amniotic epithelial cell sample [Term] id: FF:11535-120A5 name: Fibroblast - Villous Mesenchymal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000069 ! human fibroblast of villous mesenchyme sample [Term] id: FF:11536-120A6 name: Mesenchymal Stem Cells - bone marrow, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000097 ! human mesenchymal stem cell of bone marrow sample [Term] id: FF:11537-120A7 name: Mesenchymal Stem Cells - adipose, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000096 ! human mesenchymal stem cell of adipose sample [Term] id: FF:11538-120A8 name: Mesenchymal Stem Cells - hepatic, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000098 ! human hepatic mesenchymal stem cell sample [Term] id: FF:11539-120A9 name: Mesenchymal Stem Cells - umbilical, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000094 ! human mesenchymal stem cell of umbilical cord-Sciencell sample [Term] id: FF:11540-120B1 name: Fibroblast - Mammary, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000066 ! human fibroblast of mammary gland sample [Term] id: FF:11541-120B2 name: Smooth Muscle Cells - Umbilical Vein, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000177 ! human smooth muscle cell of umbilical vein sample [Term] id: FF:11544-120B5 name: CD19-positive B Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000025 ! CD19-positive B cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11545-120B6 name: CD34-positive Progenitors, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000026 ! human CD34-positive hematopoietic stem cell sample [Term] id: FF:11547-120B8 name: Mesenchymal Stem Cells - amniotic membrane, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000276 ! human amniotic membrane cell- fetal sample [Term] id: FF:11548-120B9 name: Mesenchymal Stem Cells - Wharton's Jelly, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000095 ! human mesenchymal stem cell of Wharton's jelly sample [Term] id: FF:11549-120C1 name: Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000117 ! human mesenchymal stem cell of umbilical cord blood sample [Term] id: FF:11550-120C2 name: Mouse Astrocytes - cerebellar, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000196 ! mouse astrocyte of cerebellum sample [Term] id: FF:11551-120C3 name: Mouse Astrocytes - hippocampus, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000197 ! mouse astrocyte of hippocampus sample [Term] id: FF:11552-120C4 name: Mouse Astrocytes, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000105 ! mouse astrocyte sample [Term] id: FF:11553-120C5 name: Fibroblast - skin normal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000250 ! human fibroblast of skin sample [Term] id: FF:11554-120C6 name: Fibroblast - skin walker warburg, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000252 ! human fibroblast - skin walker warburg sample [Term] id: FF:11555-120C7 name: Fibroblast - skin spinal muscular atrophy, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000251 ! human fibroblast - skin spinal muscular atrophy sample [Term] id: FF:11556-120C8 name: Fibroblast - skin dystrophia myotonica, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000253 ! human fibroblast- skin dystrophia myotonica sample [Term] id: FF:11557-120C9 name: Fibroblast - skin dystrophia myotonica, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000253 ! human fibroblast- skin dystrophia myotonica sample [Term] id: FF:11558-120D1 name: Fibroblast - skin spinal muscular atrophy, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000251 ! human fibroblast - skin spinal muscular atrophy sample [Term] id: FF:11559-120D2 name: Fibroblast - skin spinal muscular atrophy, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000251 ! human fibroblast - skin spinal muscular atrophy sample [Term] id: FF:11560-120D3 name: Fibroblast - skin dystrophia myotonica, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000253 ! human fibroblast- skin dystrophia myotonica sample [Term] id: FF:11561-120D4 name: Fibroblast - skin normal, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000250 ! human fibroblast of skin sample [Term] id: FF:11563-120D6 name: Mast cell, donor1 (heparinase treated) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0000261 ! mast cell- heparinase treated sample [Term] id: FF:11565-120D8 name: Mast cell, donor2 (heparinase treated) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0000261 ! mast cell- heparinase treated sample [Term] id: FF:11566-120D9 name: Mast cell, donor3 (heparinase treated) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0000261 ! mast cell- heparinase treated sample [Term] id: FF:11567-120E1 name: Mast cell, donor4 (heparinase treated) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0000261 ! mast cell- heparinase treated sample [Term] id: FF:11571-120E5 name: Pericytes, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000133 ! human pericyte sample [Term] id: FF:11572-120E6 name: Fibroblast - Choroid Plexus, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000060 ! human fibroblast of choroid plexus sample [Term] id: FF:11573-120E7 name: Meningeal Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000091 ! human leptomeningeal cell sample [Term] id: FF:11574-120E8 name: Neurons, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000348 ! human neuron samples [Term] id: FF:11578-120F3 name: Schwann Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000159 ! human Schwann cell sample [Term] id: FF:11579-120F4 name: Perineurial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000134 ! human perineural cell sample [Term] id: FF:11580-120F5 name: Astrocyte - cerebellum, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000195 ! human astrocyte of the cerebellum sample [Term] id: FF:11582-120F7 name: Melanocyte - dark, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000089 ! human dark melanocyte sample [Term] id: FF:11584-120F9 name: Hair Follicle Outer Root Sheath Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000075 ! human outer root sheath cell sample [Term] id: FF:11586-120G2 name: Fibroblast - Lymphatic, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000065 ! human fibroblast of lymphatic vessel sample [Term] id: FF:11587-120G3 name: Esophageal Epithelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000056 ! human epithelial cell of esophagus sample [Term] id: FF:11588-120G4 name: Smooth Muscle Cells - Esophageal, donor2 namespace: FANTOM5 comment: Previously: subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000182 ! human esophageal smooth muscle cell sample [Term] id: FF:11590-120G6 name: Renal Glomerular Endothelial Cells, donor2 namespace: FANTOM5 comment: Previously: Alveolar Epithelial Cells, donor2 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000153 ! human renal glomerular endothelial cell sample [Term] id: FF:11591-120G7 name: Bronchial Epithelial Cell, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000015 ! human bronchial epithelial cell sample [Term] id: FF:11592-120G8 name: Smooth Muscle Cells - Bronchial, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000179 ! human bronchial smooth muscle cell sample [Term] id: FF:11593-120G9 name: Smooth Muscle Cells - Tracheal, donor2 namespace: FANTOM5 comment: Previously: subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000184 ! human smooth muscle cell of trachea sample [Term] id: FF:11594-120H1 name: Renal Glomerular Endothelial Cells, donor2 namespace: FANTOM5 comment: Previously: subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000153 ! human renal glomerular endothelial cell sample [Term] id: FF:11595-120H2 name: Renal Proximal Tubular Epithelial Cell, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000155 ! human renal proximal tubular epithelial cell sample [Term] id: FF:11596-120H3 name: Renal Cortical Epithelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000152 ! human renal cortical epithelial cell sample [Term] id: FF:11597-120H4 name: Renal Epithelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000151 ! human renal epithelial cell sample [Term] id: FF:11598-120H5 name: Renal Mesangial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000154 ! human renal mesangial cell sample [Term] id: FF:11600-120H7 name: Urothelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000191 ! human urothelial cell sample [Term] id: FF:11601-120H8 name: Hepatic Sinusoidal Endothelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000046 ! human endothelial cell sample is_a: FF:0000076 ! hepatic sinusoidal endothelial cell sample is_a: FF:0000078 ! human hepatocyte sample [Term] id: FF:11603-120I1 name: Hepatocyte, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000078 ! human hepatocyte sample [Term] id: FF:11604-120I2 name: Hepatic Stellate Cells (lipocyte), donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000077 ! hepatic stellate cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11605-120I3 name: Cardiac Myocyte, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000118 ! human cardiac myocyte sample [Term] id: FF:11606-120I4 name: Corneal Epithelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000043 ! human corneal epithelial cell sample [Term] id: FF:11607-120I5 name: Keratocytes, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000084 ! human keratocyte sample [Term] id: FF:11608-120I6 name: Retinal Pigment Epithelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000158 ! human retinal pigment epithelial cell sample [Term] id: FF:11609-120I7 name: Lens Epithelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000085 ! human lens epithelial cell sample [Term] id: FF:11612-122A1 name: Trabecular Meshwork Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000188 ! human trabecular meshwork cell sample [Term] id: FF:11613-122A2 name: Amniotic Epithelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000009 ! human amniotic epithelial cell sample [Term] id: FF:11615-122A4 name: Fibroblast - Villous Mesenchymal, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000069 ! human fibroblast of villous mesenchyme sample [Term] id: FF:11616-122A5 name: Mesenchymal Stem Cells - bone marrow, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000097 ! human mesenchymal stem cell of bone marrow sample [Term] id: FF:11617-122A6 name: Mesenchymal Stem Cells - adipose, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000096 ! human mesenchymal stem cell of adipose sample [Term] id: FF:11618-122A7 name: Mesenchymal Stem Cells - hepatic, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000098 ! human hepatic mesenchymal stem cell sample [Term] id: FF:11619-122A8 name: Mesenchymal Stem Cells - umbilical, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000094 ! human mesenchymal stem cell of umbilical cord-Sciencell sample [Term] id: FF:11620-122A9 name: Fibroblast - Mammary, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000066 ! human fibroblast of mammary gland sample [Term] id: FF:11621-122B1 name: Smooth Muscle Cells - Umbilical Vein, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000177 ! human smooth muscle cell of umbilical vein sample [Term] id: FF:11624-122B4 name: CD19-positive B Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000025 ! CD19-positive B cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11625-122B5 name: CD34-positive Progenitors, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000026 ! human CD34-positive hematopoietic stem cell sample [Term] id: FF:11627-122B7 name: Mesenchymal Stem Cells - amniotic membrane, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000276 ! human amniotic membrane cell- fetal sample [Term] id: FF:11629-122B9 name: Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000117 ! human mesenchymal stem cell of umbilical cord blood sample [Term] id: FF:11632-122C3 name: Mouse Astrocytes - hippocampus, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000197 ! mouse astrocyte of hippocampus sample [Term] id: FF:11633-122C4 name: Mouse Astrocytes, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000105 ! mouse astrocyte sample [Term] id: FF:11634-122C5 name: Mouse Cardiac Myocytes, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000106 ! mouse cardiac myocyte sample [Term] id: FF:11636-122C7 name: Mouse Granule cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000108 ! mouse granule cell sample [Term] id: FF:11637-122C8 name: Mouse hepatocyte, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000109 ! mouse hepatocyte sample [Term] id: FF:11639-122D1 name: Mouse Meningeal cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000111 ! mouse leptomeningeal cell sample [Term] id: FF:11640-122D2 name: Mouse Mesenchymal stem cells - bone marrow derived, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000112 ! mouse mesenchymal stem cell of bone marrow sample [Term] id: FF:11641-122D3 name: Mouse Microglia, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000113 ! mouse microglial cell sample [Term] id: FF:11643-122D5 name: Mouse Neurons - dorsal spinal cord, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000206 ! mouse neuron of the dorsal spinal cord sample [Term] id: FF:11644-122D6 name: Mouse Neurons - hippocampal, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000202 ! mouse hippocampal neuron sample [Term] id: FF:11645-122D7 name: Mouse Neurons - raphe, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000205 ! mouse raphe nuclei neuron sample [Term] id: FF:11646-122D8 name: Mouse Neurons - striatal, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000209 ! mouse striatal neuron sample [Term] id: FF:11647-122D9 name: Mouse Neurons - cortical, donor3 namespace: FANTOM5 comment: Previously: Mouse Neurons - substantia nigra, donor3 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000204 ! cortical mouse neuron sample [Term] id: FF:11648-122E1 name: Mouse Neurons - ventral spinal cord, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000207 ! mouse neuron of the ventral spinal cord sample [Term] id: FF:11651-122E4 name: Mouse Schwann, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000116 ! mouse Schwann cell sample [Term] id: FF:11652-122E5 name: Pericytes, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000133 ! human pericyte sample [Term] id: FF:11653-122E6 name: Fibroblast - Choroid Plexus, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000060 ! human fibroblast of choroid plexus sample [Term] id: FF:11654-122E7 name: Meningeal Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000091 ! human leptomeningeal cell sample [Term] id: FF:11655-122E8 name: Neurons, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000348 ! human neuron samples [Term] id: FF:11659-122F3 name: Schwann Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000159 ! human Schwann cell sample [Term] id: FF:11661-122F5 name: Astrocyte - cerebellum, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000195 ! human astrocyte of the cerebellum sample [Term] id: FF:11663-122F7 name: Melanocyte - dark, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000089 ! human dark melanocyte sample [Term] id: FF:11667-122G2 name: Fibroblast - Lymphatic, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000065 ! human fibroblast of lymphatic vessel sample [Term] id: FF:11668-122G3 name: Esophageal Epithelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000056 ! human epithelial cell of esophagus sample [Term] id: FF:11671-122G6 name: Alveolar Epithelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000012 ! human alveolar epithelial cell sample [Term] id: FF:11672-122G7 name: Bronchial Epithelial Cell, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000015 ! human bronchial epithelial cell sample [Term] id: FF:11674-122G9 name: Smooth Muscle Cells - Tracheal, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000184 ! human smooth muscle cell of trachea sample [Term] id: FF:11675-122H1 name: Renal Glomerular Endothelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000153 ! human renal glomerular endothelial cell sample [Term] id: FF:11676-122H2 name: Renal Proximal Tubular Epithelial Cell, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000155 ! human renal proximal tubular epithelial cell sample [Term] id: FF:11678-122H4 name: Renal Epithelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000151 ! human renal epithelial cell sample [Term] id: FF:11679-122H5 name: Renal Mesangial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000154 ! human renal mesangial cell sample [Term] id: FF:11681-122H7 name: Urothelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000191 ! human urothelial cell sample [Term] id: FF:11682-122H8 name: Hepatic Sinusoidal Endothelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000046 ! human endothelial cell sample is_a: FF:0000076 ! hepatic sinusoidal endothelial cell sample is_a: FF:0000078 ! human hepatocyte sample [Term] id: FF:11684-122I1 name: Hepatocyte, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000078 ! human hepatocyte sample [Term] id: FF:11685-122I2 name: Hepatic Stellate Cells (lipocyte), donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000077 ! hepatic stellate cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11686-122I3 name: Cardiac Myocyte, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000118 ! human cardiac myocyte sample [Term] id: FF:11687-122I4 name: Corneal Epithelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000043 ! human corneal epithelial cell sample [Term] id: FF:11688-122I5 name: Keratocytes, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000084 ! human keratocyte sample [Term] id: FF:11689-122I6 name: Retinal Pigment Epithelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000158 ! human retinal pigment epithelial cell sample [Term] id: FF:11690-122I7 name: Lens Epithelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000085 ! human lens epithelial cell sample [Term] id: FF:11692-122I9 name: Fibroblast - Conjunctival, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000061 ! human fibroblast of conjuctivia sample [Term] id: FF:11693-123A1 name: Trabecular Meshwork Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000188 ! human trabecular meshwork cell sample [Term] id: FF:11694-123A2 name: Amniotic Epithelial Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000009 ! human amniotic epithelial cell sample [Term] id: FF:11696-123A4 name: Fibroblast - Villous Mesenchymal, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000069 ! human fibroblast of villous mesenchyme sample [Term] id: FF:11697-123A5 name: Mesenchymal Stem Cells - bone marrow, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000097 ! human mesenchymal stem cell of bone marrow sample [Term] id: FF:11698-123A6 name: Mesenchymal Stem Cells - adipose, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000096 ! human mesenchymal stem cell of adipose sample [Term] id: FF:11700-123A8 name: Mesenchymal Stem Cells - umbilical, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000094 ! human mesenchymal stem cell of umbilical cord-Sciencell sample [Term] id: FF:11701-123A9 name: Fibroblast - Mammary, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000066 ! human fibroblast of mammary gland sample [Term] id: FF:11702-123B1 name: Smooth Muscle Cells - Umbilical Vein, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000177 ! human smooth muscle cell of umbilical vein sample [Term] id: FF:11705-123B4 name: CD19-positive B Cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000025 ! CD19-positive B cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11708-123B7 name: Mouse Astrocytes - cerebellar, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000196 ! mouse astrocyte of cerebellum sample [Term] id: FF:11709-123B8 name: Mouse Astrocytes - hippocampus, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000197 ! mouse astrocyte of hippocampus sample [Term] id: FF:11711-123C1 name: Mouse Cardiac Myocytes, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000106 ! mouse cardiac myocyte sample [Term] id: FF:11712-123C2 name: Mouse Embryonic fibroblasts, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000107 ! mouse embryonic fibroblast sample [Term] id: FF:11713-123C3 name: Mouse Granule cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000108 ! mouse granule cell sample [Term] id: FF:11714-123C4 name: Mouse hepatocyte, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000109 ! mouse hepatocyte sample [Term] id: FF:11716-123C6 name: Mouse Meningeal cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000111 ! mouse leptomeningeal cell sample [Term] id: FF:11717-123C7 name: Mouse Mesenchymal stem cells - bone marrow derived, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000112 ! mouse mesenchymal stem cell of bone marrow sample [Term] id: FF:11718-123C8 name: Mouse Microglia, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000113 ! mouse microglial cell sample [Term] id: FF:11720-123D1 name: Mouse Neurons - dorsal spinal cord, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000206 ! mouse neuron of the dorsal spinal cord sample [Term] id: FF:11721-123D2 name: Mouse Neurons - hippocampal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000202 ! mouse hippocampal neuron sample [Term] id: FF:11722-123D3 name: Mouse Neurons - raphe, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000205 ! mouse raphe nuclei neuron sample [Term] id: FF:11723-123D4 name: Mouse Neurons - striatal, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000209 ! mouse striatal neuron sample [Term] id: FF:11724-123D5 name: Mouse Neurons - cortical, donor1 namespace: FANTOM5 comment: Previously: Mouse Neurons - substantia nigra, donor1 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000204 ! cortical mouse neuron sample [Term] id: FF:11725-123D6 name: Mouse Neurons - ventral spinal cord, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000207 ! mouse neuron of the ventral spinal cord sample [Term] id: FF:11728-123D9 name: Mouse Schwann, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000116 ! mouse Schwann cell sample [Term] id: FF:11729-123E1 name: Mouse Cardiac Myocytes, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000106 ! mouse cardiac myocyte sample [Term] id: FF:11731-123E3 name: Mouse Granule cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000108 ! mouse granule cell sample [Term] id: FF:11735-123E7 name: Mouse Mesenchymal stem cells - bone marrow derived, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000112 ! mouse mesenchymal stem cell of bone marrow sample [Term] id: FF:11736-123E8 name: Mouse Microglia, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000113 ! mouse microglial cell sample [Term] id: FF:11738-123F1 name: Mouse Neurons - dorsal spinal cord, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000206 ! mouse neuron of the dorsal spinal cord sample [Term] id: FF:11739-123F2 name: Mouse Neurons - hippocampal, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000202 ! mouse hippocampal neuron sample [Term] id: FF:11740-123F3 name: Mouse Neurons - raphe, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000205 ! mouse raphe nuclei neuron sample [Term] id: FF:11741-123F4 name: Mouse Neurons - striatal, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000209 ! mouse striatal neuron sample [Term] id: FF:11742-123F5 name: Mouse Neurons - cortical, donor2 namespace: FANTOM5 comment: Previously: Mouse Neurons - substantia nigra, donor2 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000204 ! cortical mouse neuron sample [Term] id: FF:11743-123F6 name: Mouse Neurons - ventral spinal cord, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000207 ! mouse neuron of the ventral spinal cord sample [Term] id: FF:11746-123F9 name: Mouse Schwann, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000116 ! mouse Schwann cell sample [Term] id: FF:11747-123G1 name: mesenchymal precursor cell - adipose, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000096 ! human mesenchymal stem cell of adipose sample [Term] id: FF:11748-123G2 name: mesenchymal precursor cell - adipose, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000096 ! human mesenchymal stem cell of adipose sample [Term] id: FF:11749-123G3 name: mesenchymal precursor cell - adipose, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000096 ! human mesenchymal stem cell of adipose sample [Term] id: FF:11750-123G4 name: mesenchymal precursor cell - bone marrow, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000269 ! human mesenchymal precursor cell of bone marrow sample [Term] id: FF:11751-123G5 name: mesenchymal precursor cell - bone marrow, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000269 ! human mesenchymal precursor cell of bone marrow sample [Term] id: FF:11752-123G6 name: mesenchymal precursor cell - cardiac, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000271 ! human cardiac mesenchymal precursor cell sample [Term] id: FF:11753-123G7 name: mesenchymal precursor cell - cardiac, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000271 ! human cardiac mesenchymal precursor cell sample [Term] id: FF:11754-123G8 name: mesenchymal precursor cell - cardiac, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000271 ! human cardiac mesenchymal precursor cell sample [Term] id: FF:11755-123G9 name: mesenchymal precursor cell - cardiac, donor4 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000271 ! human cardiac mesenchymal precursor cell sample [Term] id: FF:11756-123H1 name: mesenchymal precursor cell - ovarian cancer left ovary, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000273 ! human mesenchymal precursor cell- ovarian cancer-left ovary sample [Term] id: FF:11757-123H2 name: mesenchymal precursor cell - ovarian cancer right ovary, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000275 ! human mesenchymal precursor cell- ovarian cancer-right ovary sample [Term] id: FF:11758-123H3 name: mesenchymal precursor cell - ovarian cancer metastasis, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000274 ! human mesenchymal precursor cell- ovarian cancer-metastasis sample [Term] id: FF:11759-123H4 name: mesenchymal precursor cell - ovarian cancer right ovary, donor2 namespace: FANTOM5 comment: Previously: mesenchymal precursor cell - ovarian cancer right ovary, donor2, tech rep1 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000275 ! human mesenchymal precursor cell- ovarian cancer-right ovary sample [Term] id: FF:11760-123H5 name: mesenchymal precursor cell - ovarian cancer left ovary, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000273 ! human mesenchymal precursor cell- ovarian cancer-left ovary sample [Term] id: FF:11761-123H6 name: mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000275 ! human mesenchymal precursor cell- ovarian cancer-right ovary sample [Term] id: FF:11762-123H7 name: mesenchymal precursor cell - ovarian cancer metastasis, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000274 ! human mesenchymal precursor cell- ovarian cancer-metastasis sample [Term] id: FF:11763-123H8 name: tenocyte, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000280 ! human tenocyte sample [Term] id: FF:11765-123I1 name: tenocyte, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000280 ! human tenocyte sample [Term] id: FF:11768-123I4 name: tenocyte, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000280 ! human tenocyte sample [Term] id: FF:11769-123I5 name: Bronchial Epithelial Cell, donor7 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000015 ! human bronchial epithelial cell sample [Term] id: FF:11770-123I6 name: Mouse Neurons - substantia nigra, donor6 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000208 ! mouse neuron of the substantia nigra sample [Term] id: FF:11771-123I7 name: salivary acinar cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000278 ! human salivary acinar cell sample [Term] id: FF:11772-123I8 name: salivary acinar cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000278 ! human salivary acinar cell sample [Term] id: FF:11773-123I9 name: salivary acinar cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000278 ! human salivary acinar cell sample [Term] id: FF:11774-124A1 name: CD41-positive megakaryocyte cancer, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011131 ! mouse CD41-positive megakaryocyte cancer sample [Term] id: FF:11775-124A2 name: CD41-positive megakaryocyte control, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011468 ! mouse CD41-positive megakaryocyte control sample [Term] id: FF:11776-124A3 name: CD41-positive megakaryocyte cancer, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011131 ! mouse CD41-positive megakaryocyte cancer sample [Term] id: FF:11777-124A4 name: CD41-positive megakaryocyte control, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011468 ! mouse CD41-positive megakaryocyte control sample [Term] id: FF:11778-124A5 name: CD41-positive megakaryocyte cancer, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011131 ! mouse CD41-positive megakaryocyte cancer sample [Term] id: FF:11779-124A6 name: CD41-positive megakaryocyte control, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011468 ! mouse CD41-positive megakaryocyte control sample [Term] id: FF:11780-124A7 name: CD4+CD25+CD45RA+ naive regulatory T cells, donor1 namespace: FANTOM comment: Previously: CD4-positiveCD25-positiveCD45RA+ memory regulatory T cells, donor1. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011128 ! human CD4-positiveCD25-positiveCD45RA- naive regulatory T cells sample relationship: derives_from CL:0002677 ! naive regulatory T cell [Term] id: FF:11782-124A9 name: CD4+CD25+CD45RA- memory regulatory T cells, donor1 namespace: FANTOM comment: Previously: CD4-positiveCD25-positiveCD45RA- naive regulatory T cells, donor1. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011128 ! human CD4-positiveCD25-positiveCD45RA- naive regulatory T cells sample relationship: derives_from CL:0002677 ! naive regulatory T cell [Term] id: FF:11783-124B1 name: Renal Glomerular Endothelial Cells, donor4 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000153 ! human renal glomerular endothelial cell sample [Term] id: FF:11784-124B2 name: CD4+CD25-CD45RA+ naive conventional T cells, donor1 namespace: FANTOM comment: Previously: CD4-positiveCD25-CD45RA+ memory conventional T cells, donor1. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11786-124B4 name: CD4+CD25-CD45RA- memory conventional T cells, donor1 namespace: FANTOM comment: Previously: CD4-positiveCD25-CD45RA- naive conventional T cells, donor1 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011122 ! human CD4-positiveCD25-CD45RA- naive conventional T cells sample [Term] id: FF:11788-124B6 name: CD14-positiveCD16- Monocytes, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011111 ! human CD14-positive CD16-negative Monocytes sample [Term] id: FF:11789-124B7 name: CD14-positiveCD16-positive Monocytes, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011100 ! human CD14-CD16-positive Monocytes sample [Term] id: FF:11790-124B8 name: CD14-CD16-positive Monocytes, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011100 ! human CD14-CD16-positive Monocytes sample [Term] id: FF:11791-124B9 name: CD4+CD25-CD45RA+ naive conventional T cells expanded, donor1 namespace: FANTOM comment: Previously: CD4-positiveCD25-CD45RA+ memory conventional T cells expanded, donor1. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11792-124C1 name: CD4+CD25-CD45RA- memory conventional T cells expanded, donor1 namespace: FANTOM comment: Previously: CD4-positiveCD25-CD45RA- naive conventional T cells expanded, donor1. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11793-124C2 name: CD4+CD25+CD45RA+ naive regulatory T cells expanded, donor1 namespace: FANTOM comment: Previously: CD4-positiveCD25-positiveCD45RA+ memory regulatory T cells expanded, donor1. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11794-124C3 name: CD4+CD25+CD45RA- memory regulatory T cells expanded, donor1 namespace: FANTOM comment: Changed from previous label. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11795-124C4 name: CD4+CD25-CD45RA+ naive conventional T cells, donor2 namespace: FANTOM comment: Changed from previous label. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11796-124C5 name: CD4+CD25+CD45RA+ naive regulatory T cells, donor2 namespace: FANTOM comment: Changed from previous label. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11797-124C6 name: CD4+CD25+CD45RA- memory regulatory T cells, donor2 namespace: FANTOM comment: Changed from previous label. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11798-124C7 name: CD4+CD25-CD45RA- memory conventional T cells, donor2 namespace: FANTOM comment: Changed from previous label. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11799-124C8 name: CD14-positiveCD16- Monocytes, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011111 ! human CD14-positive CD16-negative Monocytes sample [Term] id: FF:11800-124C9 name: CD14-CD16-positive Monocytes, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011100 ! human CD14-CD16-positive Monocytes sample [Term] id: FF:11801-124D1 name: CD14-positiveCD16-positive Monocytes, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011100 ! human CD14-CD16-positive Monocytes sample [Term] id: FF:11804-124D4 name: neurospheres - sympathetic neuron derived, rep1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011144 ! mouse neurospheres - sympathetic neuron derived sample [Term] id: FF:11805-124D5 name: neurospheres - sympathetic neuron derived, rep2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011144 ! mouse neurospheres - sympathetic neuron derived sample [Term] id: FF:11806-124D6 name: neurospheres - sympathetic neuron derived, rep3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011144 ! mouse neurospheres - sympathetic neuron derived sample [Term] id: FF:11807-124D7 name: neurospheres - parasympathetic neuron derived, rep1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011143 ! mouse neurospheres - parasympathetic neuron derived sample [Term] id: FF:11808-124D8 name: neurospheres - parasympathetic neuron derived, rep2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011143 ! mouse neurospheres - parasympathetic neuron derived sample [Term] id: FF:11809-124D9 name: neurospheres - parasympathetic neuron derived, rep3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011143 ! mouse neurospheres - parasympathetic neuron derived sample [Term] id: FF:11810-124E1 name: neurospheres - enteric neuron derived, rep1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011142 ! mouse neurospheres - enteric neuron derived sample [Term] id: FF:11811-124E2 name: neurospheres - enteric neuron derived, rep2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011142 ! mouse neurospheres - enteric neuron derived sample [Term] id: FF:11812-124E3 name: neurospheres - enteric neuron derived, rep3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011142 ! mouse neurospheres - enteric neuron derived sample [Term] id: FF:11813-124E4 name: CD4-positiveCD25-CD44- naive conventional T cells, pool1 (C57BL_6J) namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011450 ! CD4-positiveCD25-CD44- naive conventional T cells- (C57BL_6J) sample [Term] id: FF:11815-124E6 name: CD4-positiveCD25-CD44- naive conventional T cells stimulated with alphaCD3_CD28 , 06hr, pool1 (C57BL_6J) namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011446 ! CD4-positiveCD25-CD44- naive conventional T cells stimulated with alphaCD3_CD28 - 06hr- (C57BL_6J) sample [Term] id: FF:11816-124E7 name: CD4-positiveCD25-CD44- naive conventional T cells stimulated with PMA an ionomycin, 02hr, pool1 (C57BL_6J) namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011448 ! CD4-positiveCD25-CD44- naive conventional T cells stimulated with PMA an ionomycin- 02hr- (C57BL_6J) sample [Term] id: FF:11817-124E8 name: CD4-positiveCD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl) namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011451 ! CD4-positiveCD25-CD44- naive conventional T cells- (Balb_cAJcl) sample [Term] id: FF:11818-124E9 name: CD4-positiveCD25-positive regulatory T cells, pool2 (Balb_cAJcl) namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011455 ! CD4-positiveCD25-positive regulatory T cells (Balb_cAJcl) sample [Term] id: FF:11819-124F1 name: CD4-positiveCD25-CD44- naive conventional T cells stimulated with alphaCD3_CD28, 06hr, pool2 (Balb_cAJcl) namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011447 ! CD4-positiveCD25-CD44- naive conventional T cells stimulated with alphaCD3_CD28- 06hr- (Balb_cAJcl) sample [Term] id: FF:11820-124F2 name: CD4-positiveCD25-CD44- naive conventional T cells stimulated with PMA an ionomycin, 02hr, pool2 (Balb_cAJcl) namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011449 ! CD4-positiveCD25-CD44- naive conventional T cells stimulated with PMA an ionomycin- 02hr- (Balb_cAJcl) sample [Term] id: FF:11822-124F4 name: Mouse hepatocyte, donor6 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000109 ! mouse hepatocyte sample [Term] id: FF:11824-124F6 name: Mouse hepatocyte, donor8 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000109 ! mouse hepatocyte sample [Term] id: FF:11825-124F7 name: Mouse hepatic Stellate Cells (lipocyte), donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011461 ! Mouse hepatic Stellate Cells (lipocyte) sample [Term] id: FF:11830-124G3 name: Mouse hepatic Sinusoidal Endothelial Cells, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011161 ! Mouse hepatic Sinusoidal Endothelial Cells sample [Term] id: FF:11833-124G6 name: mesenchymal precursor cell - ovarian cancer left ovary, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000273 ! human mesenchymal precursor cell- ovarian cancer-left ovary sample [Term] id: FF:11835-124G8 name: mesenchymal precursor cell - ovarian cancer metastasis, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000274 ! human mesenchymal precursor cell- ovarian cancer-metastasis sample [Term] id: FF:11836-124G9 name: mesenchymal precursor cell - ovarian cancer left ovary, donor4 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000273 ! human mesenchymal precursor cell- ovarian cancer-left ovary sample [Term] id: FF:11837-124H1 name: mesenchymal precursor cell - ovarian cancer right ovary, donor4 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000275 ! human mesenchymal precursor cell- ovarian cancer-right ovary sample [Term] id: FF:11838-124H2 name: mesenchymal precursor cell - ovarian cancer metastasis, donor4 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000274 ! human mesenchymal precursor cell- ovarian cancer-metastasis sample [Term] id: FF:11840-124H4 name: mesenchymal precursor cell - bone marrow, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000269 ! human mesenchymal precursor cell of bone marrow sample [Term] id: FF:11841-124H5 name: serous adenocarcinoma cell line:SK-OV-3-R, rep1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0103803 ! serous adenocarcinoma cell line sample [Term] id: FF:11842-124H6 name: mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02-G) namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002090 ! technical replicate is_a: EFO:0002091 ! biological replicate is_a: FF:0000275 ! human mesenchymal precursor cell- ovarian cancer-right ovary sample [Term] id: FF:11843-124H7 name: serous adenocarcinoma cell line:SK-OV-3-R after co-culture with SOC-57-02-G, rep1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0001746 ! development or differentiation design is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample is_a: FF:0000350 ! experimentally modified sample is_a: FF:0103803 ! serous adenocarcinoma cell line sample [Term] id: FF:11845-124H9 name: GP2-positive M cell, pool1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011159 ! mouse GP2-positive M cell sample [Term] id: FF:11846-124I1 name: GP2-positive M cell, pool2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011159 ! mouse GP2-positive M cell sample [Term] id: FF:11847-124I2 name: GP2-positive M cell, pool3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011159 ! mouse GP2-positive M cell sample [Term] id: FF:11848-124I3 name: CD326-positive enterocyte, pool1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011149 ! mouse CD326-positive enterocyte sample [Term] id: FF:11849-124I4 name: CD326-positive enterocyte, pool2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011149 ! mouse CD326-positive enterocyte sample [Term] id: FF:11850-124I5 name: CD326-positive enterocyte isolated from mice, treated with RANKL, day03, pool1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011113 ! mouse CD326-positive enterocyte isolated from mice- treated with RANKL- day03 sample [Term] id: FF:11851-124I6 name: CD326-positive enterocyte isolated from mice, treated with RANKL, day03, pool2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011113 ! mouse CD326-positive enterocyte isolated from mice- treated with RANKL- day03 sample [Term] id: FF:11852-124I7 name: CD326-positive+ enterocyte isolated from mice, treated with RANKL, day03, pool1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011113 ! mouse CD326-positive enterocyte isolated from mice- treated with RANKL- day03 sample [Term] id: FF:11853-124I8 name: CD326-positive+ enterocyte isolated from mice, treated with RANKL, day03, pool2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011113 ! mouse CD326-positive enterocyte isolated from mice- treated with RANKL- day03 sample [Term] id: FF:11854-124I9 name: Mouse CD4-positive T Cells, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000031 ! CD4-positive T cell sample is_a: FF:0000103 ! mouse sample [Term] id: FF:11855-125A1 name: Mouse CD8-positive T Cells, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000030 ! CD8-positive T cell sample is_a: FF:0000103 ! mouse sample [Term] id: FF:11856-125A2 name: Mouse CD19-positive B Cells, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000025 ! CD19-positive B cell sample is_a: FF:0000103 ! mouse sample [Term] id: FF:11860-125A6 name: CD14-positive monocytes - treated with BCG, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011103 ! human CD14-positive monocytes - treated with BCG sample [Term] id: FF:11861-125A7 name: CD14-positive monocytes - treated with IFN + N-hexane, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011443 ! CD14-positive monocytes - treated with IFN + N-hexane sample [Term] id: FF:11862-125A8 name: CD14-positive monocytes - treated with Trehalose dimycolate (TDM), donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011444 ! CD14-positive monocytes - treated with Trehalose dimycolate (TDM) sample [Term] id: FF:11863-125A9 name: CD14-positive monocytes - mock treated, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011101 ! human CD14-positive monocytes - mock treated sample [Term] id: FF:11864-125B1 name: CD14-positive monocytes - treated with Group A streptococci, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011106 ! human CD14-positive monocytes - treated with Group A streptococci sample [Term] id: FF:11865-125B2 name: CD14-positive monocytes - treated with lipopolysaccharide, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011108 ! human CD14-positive monocytes - treated with lipopolysaccharide sample [Term] id: FF:11866-125B3 name: CD14-positive monocytes - treated with Salmonella, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011109 ! human CD14-positive monocytes - treated with Salmonella sample [Term] id: FF:11867-125B4 name: CD14-positive monocytes - treated with Cryptococcus, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011105 ! human CD14-positive monocytes - treated with Cryptococcus sample [Term] id: FF:11868-125B5 name: CD14-positive monocytes - treated with Candida, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011104 ! human CD14-positive monocytes - treated with Candida sample [Term] id: FF:11869-125B6 name: CD14-positive monocytes - treated with B-glucan, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011102 ! human CD14-positive monocytes - treated with B-glucan sample [Term] id: FF:11870-125B7 name: CD14-positive monocytes - treated with BCG, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011103 ! human CD14-positive monocytes - treated with BCG sample [Term] id: FF:11871-125B8 name: CD14-positive monocytes - treated with IFN + N-hexane, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011443 ! CD14-positive monocytes - treated with IFN + N-hexane sample [Term] id: FF:11872-125B9 name: CD14-positive monocytes - treated with Trehalose dimycolate (TDM), donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011444 ! CD14-positive monocytes - treated with Trehalose dimycolate (TDM) sample [Term] id: FF:11873-125C1 name: CD14-positive monocytes - mock treated, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011101 ! human CD14-positive monocytes - mock treated sample [Term] id: FF:11874-125C2 name: CD14-positive monocytes - treated with Group A streptococci, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011106 ! human CD14-positive monocytes - treated with Group A streptococci sample [Term] id: FF:11875-125C3 name: CD14-positive monocytes - treated with lipopolysaccharide, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011108 ! human CD14-positive monocytes - treated with lipopolysaccharide sample [Term] id: FF:11876-125C4 name: CD14-positive monocytes - treated with Salmonella, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011109 ! human CD14-positive monocytes - treated with Salmonella sample [Term] id: FF:11877-125C5 name: CD14-positive monocytes - treated with Cryptococcus, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011105 ! human CD14-positive monocytes - treated with Cryptococcus sample [Term] id: FF:11878-125C6 name: CD14-positive monocytes - treated with Candida, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011104 ! human CD14-positive monocytes - treated with Candida sample [Term] id: FF:11879-125C7 name: CD14-positive monocytes - treated with B-glucan, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011102 ! human CD14-positive monocytes - treated with B-glucan sample [Term] id: FF:11880-125C8 name: CD14-positive monocytes - treated with BCG, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011103 ! human CD14-positive monocytes - treated with BCG sample [Term] id: FF:11881-125C9 name: CD14-positive monocytes - treated with IFN + N-hexane, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011443 ! CD14-positive monocytes - treated with IFN + N-hexane sample [Term] id: FF:11882-125D1 name: CD14-positive monocytes - treated with Trehalose dimycolate (TDM), donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011444 ! CD14-positive monocytes - treated with Trehalose dimycolate (TDM) sample [Term] id: FF:11883-125D2 name: CD14-positive monocytes - mock treated, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011101 ! human CD14-positive monocytes - mock treated sample [Term] id: FF:11884-125D3 name: CD14-positive monocytes - treated with Group A streptococci, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011106 ! human CD14-positive monocytes - treated with Group A streptococci sample [Term] id: FF:11885-125D4 name: CD14-positive monocytes - treated with lipopolysaccharide, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011108 ! human CD14-positive monocytes - treated with lipopolysaccharide sample [Term] id: FF:11886-125D5 name: CD14-positive monocytes - treated with Salmonella, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011109 ! human CD14-positive monocytes - treated with Salmonella sample [Term] id: FF:11887-125D6 name: CD14-positive monocytes - treated with Cryptococcus, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011105 ! human CD14-positive monocytes - treated with Cryptococcus sample [Term] id: FF:11888-125D7 name: CD14-positive monocytes - treated with Candida, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011104 ! human CD14-positive monocytes - treated with Candida sample [Term] id: FF:11889-125D8 name: CD14-positive monocytes - treated with B-glucan, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011102 ! human CD14-positive monocytes - treated with B-glucan sample [Term] id: FF:11890-125D9 name: Hep-2 cells treated with Streptococci strain 5448, rep1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011133 ! human Hep-2 cells treated with Streptococci strain 5448 sample [Term] id: FF:11891-125E1 name: Hep-2 cells treated with Streptococci strain 5448, rep2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011133 ! human Hep-2 cells treated with Streptococci strain 5448 sample [Term] id: FF:11892-125E2 name: Hep-2 cells treated with Streptococci strain 5448, rep3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011133 ! human Hep-2 cells treated with Streptococci strain 5448 sample [Term] id: FF:11894-125E4 name: Hep-2 cells treated with Streptococci strain JRS4, rep1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011134 ! human Hep-2 cells treated with Streptococci strain JRS4 sample [Term] id: FF:11895-125E5 name: Hep-2 cells treated with Streptococci strain JRS4, rep2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011134 ! human Hep-2 cells treated with Streptococci strain JRS4 sample [Term] id: FF:11896-125E6 name: Hep-2 cells treated with Streptococci strain JRS4, rep3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011134 ! human Hep-2 cells treated with Streptococci strain JRS4 sample [Term] id: FF:11898-125E8 name: Hep-2 cells mock treated, rep1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011132 ! human Hep-2 cells mock treated sample [Term] id: FF:11899-125E9 name: Hep-2 cells mock treated, rep2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011132 ! human Hep-2 cells mock treated sample [Term] id: FF:11900-125F1 name: Hep-2 cells mock treated, rep3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011132 ! human Hep-2 cells mock treated sample [Term] id: FF:11901-125F2 name: migratory langerhans cells, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011136 ! human migratory langerhans cells sample [Term] id: FF:11902-125F3 name: migratory langerhans cells, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011136 ! human migratory langerhans cells sample [Term] id: FF:11903-125F4 name: migratory langerhans cells, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011136 ! human migratory langerhans cells sample [Term] id: FF:11904-125F5 name: immature langerhans cells, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011135 ! human immature langerhans cells sample [Term] id: FF:11905-125F6 name: immature langerhans cells, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011135 ! human immature langerhans cells sample [Term] id: FF:11906-125F7 name: CD4+CD25-CD45RA+ naive conventional T cells, donor3 namespace: FANTOM comment: Changed from previous label. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11907-125F8 name: CD4+CD25+CD45RA+ naive regulatory T cells, donor3 namespace: FANTOM comment: Changed from previous label. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11908-125F9 name: CD4+CD25+CD45RA- memory regulatory T cells, donor3 namespace: FANTOM comment: Changed from previous label. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11909-125G1 name: CD4+CD25-CD45RA- memory conventional T cells, donor3 namespace: FANTOM comment: Changed from previous label. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11910-125G2 name: CD14-positiveCD16- Monocytes, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011111 ! human CD14-positive CD16-negative Monocytes sample [Term] id: FF:11911-125G3 name: CD14-CD16-positive Monocytes, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011100 ! human CD14-CD16-positive Monocytes sample [Term] id: FF:11912-125G4 name: CD14-positiveCD16-positive Monocytes, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011100 ! human CD14-CD16-positive Monocytes sample [Term] id: FF:11913-125G5 name: CD4+CD25-CD45RA+ naive conventional T cells expanded, donor2 namespace: FANTOM comment: Changed from previous label. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11916-125G8 name: CD4+CD25+CD45RA- memory regulatory T cells expanded, donor2 namespace: FANTOM comment: Changed from previous label. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11917-125G9 name: CD4+CD25-CD45RA+ naive conventional T cells expanded, donor3 namespace: FANTOM comment: Changed from previous label. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11920-125H3 name: CD4+CD25+CD45RA- memory regulatory T cells expanded, donor3 namespace: FANTOM comment: Changed from previous label. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000210 ! human sample [Term] id: FF:11929-125I3 name: Mallassez-derived cells, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000087 ! human Malassez derived epithelial cell sample [Term] id: FF:11930-125I4 name: Mallassez-derived cells, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000087 ! human Malassez derived epithelial cell sample [Term] id: FF:11931-125I5 name: Reticulocytes, rep1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0011169 ! human reticulocyte sample [Term] id: FF:11932-125I6 name: Reticulocytes, rep2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0011169 ! human reticulocyte sample [Term] id: FF:11933-125I7 name: Olfactory epithelial cells, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0104976 ! human nasal epithelial cell sample [Term] id: FF:11934-125I8 name: Olfactory epithelial cells, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0104976 ! human nasal epithelial cell sample [Term] id: FF:11935-125I9 name: Olfactory epithelial cells, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0104976 ! human nasal epithelial cell sample [Term] id: FF:11936-126A1 name: Olfactory epithelial cells, donor4 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0104976 ! human nasal epithelial cell sample [Term] id: FF:12-14D5 name: cortex, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000103 ! mouse sample is_a: FF:0011525 ! cortex- adult sample [Term] id: FF:12121-128C6 name: stem cell (cKit+ Sca1- lineage-) KSL, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000021 ! hematopoietic stem cell sample is_a: FF:0000103 ! mouse sample [Term] id: FF:12122-128C7 name: common myeloid progenitor CMP, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000041 ! common myeloid progenitor sample is_a: FF:0000103 ! mouse sample [Term] id: FF:12123-128C8 name: granulocyte macrophage progenitor GMP, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000070 ! granulocyte macrophage progenitor cell sample is_a: FF:0000103 ! mouse sample [Term] id: FF:12124-128C9 name: stem cell (cKit+ Sca1- lineage-) KSL, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000021 ! hematopoietic stem cell sample is_a: FF:0000103 ! mouse sample [Term] id: FF:12125-128D1 name: common myeloid progenitor CMP, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000041 ! common myeloid progenitor sample is_a: FF:0000103 ! mouse sample [Term] id: FF:12126-128D2 name: granulocyte macrophage progenitor GMP, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000070 ! granulocyte macrophage progenitor cell sample is_a: FF:0000103 ! mouse sample [Term] id: FF:12127-128D3 name: stem cell (cKit+ Sca1- lineage-) KSL, rep3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000021 ! hematopoietic stem cell sample is_a: FF:0000103 ! mouse sample [Term] id: FF:12128-128D4 name: common myeloid progenitor CMP, rep3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000041 ! common myeloid progenitor sample is_a: FF:0000103 ! mouse sample [Term] id: FF:12129-128D5 name: granulocyte macrophage progenitor GMP, rep3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000070 ! granulocyte macrophage progenitor cell sample is_a: FF:0000103 ! mouse sample [Term] id: FF:12130-128D6 name: common myeloid progenitor CMP, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000041 ! common myeloid progenitor sample is_a: FF:0000210 ! human sample [Term] id: FF:12131-128D7 name: granulocyte macrophage progenitor, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000070 ! granulocyte macrophage progenitor cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12132-128D8 name: promyelocytes/myelocytes PMC, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000144 ! human promyelocyte/myelocyte sample [Term] id: FF:12133-128D9 name: neutrophil PMN, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000122 ! human neutrophil sample [Term] id: FF:12134-128E1 name: common myeloid progenitor CMP, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000041 ! common myeloid progenitor sample is_a: FF:0000210 ! human sample [Term] id: FF:12135-128E2 name: granulocyte macrophage progenitor, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000070 ! granulocyte macrophage progenitor cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12136-128E3 name: promyelocytes/myelocytes PMC, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000144 ! human promyelocyte/myelocyte sample [Term] id: FF:12137-128E4 name: neutrophil PMN, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000122 ! human neutrophil sample [Term] id: FF:12139-128E6 name: granulocyte macrophage progenitor, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000070 ! granulocyte macrophage progenitor cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12140-128E7 name: promyelocytes/myelocytes PMC, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000144 ! human promyelocyte/myelocyte sample [Term] id: FF:12141-128E8 name: neutrophil PMN, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000122 ! human neutrophil sample [Term] id: FF:12142-128E9 name: Mallassez-derived cells, donor1 (MZH3) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000087 ! human Malassez derived epithelial cell sample [Term] id: FF:12148-128F6 name: CD8-positive T Cells (pluriselect), donor1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000030 ! CD8-positive T cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12151-128F9 name: CD19-positive B Cells (pluriselect), donor1, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000025 ! CD19-positive B cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12156-128G5 name: Mesothelial Cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000099 ! human mesothelial cell sample [Term] id: FF:12157-128G6 name: Sox2+ Supporting cells - organ of corti, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000279 ! mouse Sox2-positive supporting cell- organ of corti sample [Term] id: FF:12158-128G7 name: Atoh+ Inner ear hair cells - organ of corti, pool1 namespace: FANTOM5 comment: Previously: Math1- Inner ear hair cells - organ of corti, pool1 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000265 ! mouse Atoh-positive inner hair cell sample [Term] id: FF:12159-128G8 name: MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL) namespace: FANTOM5 comment: Previously: MDSC (MC1-positiveGr1-positive) cancer, rep1 (10,11,12 3LL). TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000268 ! cancer related muscle derived stem cell (Mouse) sample [Term] id: FF:12160-128G9 name: MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS) namespace: FANTOM5 comment: Previously. MDSC (MC1-positiveGr1-positive) control, rep1 (4,5,6PBS). TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample [Term] id: FF:12161-128H1 name: MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL) namespace: FANTOM5 comment: Previously: MDSC (MC1-positiveGr1-positive) cancer, rep2 (0127 3LL). TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000268 ! cancer related muscle derived stem cell (Mouse) sample [Term] id: FF:12162-128H2 name: MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS) namespace: FANTOM5 comment: Previously. MDSC (MC1-positiveGr1-positive) control, rep2 (0127 PBS). TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample [Term] id: FF:12163-128H3 name: MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL) namespace: FANTOM5 comment: Previously: MDSC (MC1-positiveGr1-positive) cancer, rep3 (0128 3LL). TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000268 ! cancer related muscle derived stem cell (Mouse) sample [Term] id: FF:12164-128H4 name: MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS) namespace: FANTOM5 comment: Previously: MDSC (MC1-positiveGr1-positive) control, rep3 (0128 PBS). TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000103 ! mouse sample [Term] id: FF:12171-128I2 name: CD8-positive T Cells (pluriselect), donor1,rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000030 ! CD8-positive T cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12174-128I5 name: CD19-positive B Cells (pluriselect), donor1,rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000025 ! CD19-positive B cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12176-128I7 name: Whole blood (ribopure), donor1, donation1 (repurified) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000281 ! human whole blood sample [Term] id: FF:12177-128I8 name: Whole blood (ribopure), donor1, donation2 (repurified) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000281 ! human whole blood sample [Term] id: FF:12179-129A1 name: Whole blood (ribopure), donor090309, donation1 (repurified) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000281 ! human whole blood sample [Term] id: FF:12180-129A2 name: Whole blood (ribopure), donor090309, donation2 (repurified) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000281 ! human whole blood sample [Term] id: FF:12181-129A3 name: Whole blood (ribopure), donor090309, donation3 (repurified) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000281 ! human whole blood sample [Term] id: FF:12182-129A4 name: Whole blood (ribopure), donor090612, donation1 (repurified) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000281 ! human whole blood sample [Term] id: FF:12183-129A5 name: Whole blood (ribopure), donor090612, donation2 (repurified) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000281 ! human whole blood sample [Term] id: FF:12184-129A6 name: Whole blood (ribopure), donor090612, donation3 (repurified) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000002 ! in vivo cell sample is_a: FF:0000281 ! human whole blood sample [Term] id: FF:12186-129A8 name: CD8-positive T Cells (pluriselect), donor090309, donation1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000030 ! CD8-positive T cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12189-129B2 name: CD19-positive B Cells (pluriselect), donor090309, donation1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000025 ! CD19-positive B cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12191-129B4 name: CD8-positive T Cells (pluriselect), donor090309, donation2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000030 ! CD8-positive T cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12194-129B7 name: CD19-positive B Cells (pluriselect), donor090309, donation2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000025 ! CD19-positive B cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12196-129B9 name: CD8-positive T Cells (pluriselect), donor090309, donation3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000030 ! CD8-positive T cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12199-129C3 name: CD19-positive B Cells (pluriselect), donor090309, donation3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000025 ! CD19-positive B cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12201-129C5 name: CD8-positive T Cells (pluriselect), donor090612, donation1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000030 ! CD8-positive T cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12204-129C8 name: CD19-positive B Cells (pluriselect), donor090612, donation1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000025 ! CD19-positive B cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12206-129D1 name: CD8-positive T Cells (pluriselect), donor090612, donation2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000030 ! CD8-positive T cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12209-129D4 name: CD19-positive B Cells (pluriselect), donor090612, donation2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000025 ! CD19-positive B cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12211-129D6 name: CD8-positive T Cells (pluriselect), donor090612, donation3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000030 ! CD8-positive T cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12214-129D9 name: CD19-positive B Cells (pluriselect), donor090612, donation3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000025 ! CD19-positive B cell sample is_a: FF:0000210 ! human sample [Term] id: FF:12223-129E9 name: CD133-positive stem cells - cord blood derived, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000022 ! human CD133-positive stem cell - cord blood derived sample [Term] id: FF:12224-129F1 name: CD133-positive stem cells - adult bone marrow derived, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000020 ! human CD133-positive progenitor cell- bone marrow derived sample [Term] id: FF:12225-129F2 name: CD34-positive stem cells - adult bone marrow derived, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000026 ! human CD34-positive hematopoietic stem cell sample [Term] id: FF:12226-129F3 name: nasal epithelial cells, donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0104976 ! human nasal epithelial cell sample [Term] id: FF:12227-129F4 name: nasal epithelial cells, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0104976 ! human nasal epithelial cell sample [Term] id: FF:12228-129F5 name: Lgr5 positive intestinal stem cells, pool1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000079 ! mouse Lgr5-positive intestinal epithelial stem cell sample [Term] id: FF:12229-129F6 name: Lgr5 positive intestinal stem cells, pool2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000079 ! mouse Lgr5-positive intestinal epithelial stem cell sample [Term] id: FF:12230-129F7 name: Lgr5 positive intestinal stem cells, pool3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000079 ! mouse Lgr5-positive intestinal epithelial stem cell sample [Term] id: FF:12231-129F8 name: mature adipocyte, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000266 ! human mature adipocyte sample [Term] id: FF:12232-129F9 name: mature adipocyte, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000266 ! human mature adipocyte sample [Term] id: FF:12233-129G1 name: mature adipocyte, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000266 ! human mature adipocyte sample [Term] id: FF:12234-129G2 name: mature adipocyte, donor4 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000266 ! human mature adipocyte sample [Term] id: FF:12235-129G3 name: amniotic membrane cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000010 ! human amniotic membrane cell- Amnion sample [Term] id: FF:12236-129G4 name: amniotic membrane cells, donor2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000010 ! human amniotic membrane cell- Amnion sample [Term] id: FF:12237-129G5 name: amniotic membrane cells, donor3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000010 ! human amniotic membrane cell- Amnion sample [Term] id: FF:12238-129G6 name: chorionic membrane cells, donor1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000038 ! human chorionic membrane stem cell sample [Term] id: FF:12239-129G7 name: chorionic membrane cells, donor2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000038 ! human chorionic membrane stem cell sample [Term] id: FF:12240-129G8 name: chorionic membrane cells, donor3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000038 ! human chorionic membrane stem cell sample [Term] id: FF:12241-129G9 name: Basophils, donor1 (heparinase treated) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000212 ! human basophil heparinase treated sample [Term] id: FF:12242-129H1 name: Basophils, donor2 (heparinase treated) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000212 ! human basophil heparinase treated sample [Term] id: FF:12243-129H2 name: Basophils, donor3 (heparinase treated) namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000212 ! human basophil heparinase treated sample [Term] id: FF:12244-129H3 name: Eosinophils, donor1 (heparinase treated) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000249 ! human eosinophil- heparinase treated sample [Term] id: FF:12245-129H4 name: Eosinophils, donor2 (heparinase treated) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000249 ! human eosinophil- heparinase treated sample [Term] id: FF:12246-129H5 name: Eosinophils, donor3 (heparinase treated) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000249 ! human eosinophil- heparinase treated sample [Term] id: FF:12260-130A1 name: Lymphatic Endothelial cells response to VEGFC, 00hr00min, rep1 (MM XIX - 1) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000410 ! human Lymphatic Endothelial cells 0min after VEGFC treatment sample [Term] id: FF:12338-130I7 name: ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, rep1 (000hC4) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000488 ! mouse ST2 Mesenchymal stem cells, cells 0hr after medium change , without induction sample [Term] id: FF:12382-131E6 name: Lymphatic Endothelial cells response to VEGFC, 00hr00min, rep2 (MM XIV - 1) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000410 ! human Lymphatic Endothelial cells 0min after VEGFC treatment sample [Term] id: FF:12460-132E3 name: ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, rep2 (000hC5) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000488 ! mouse ST2 Mesenchymal stem cells, cells 0hr after medium change , without induction sample [Term] id: FF:12504-133A2 name: Lymphatic Endothelial cells response to VEGFC, 00hr00min, rep3 (MM XXII - 1 ) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000410 ! human Lymphatic Endothelial cells 0min after VEGFC treatment sample [Term] id: FF:1251-16I5 name: intestine, embryo E12, rep1 namespace: FANTOM5 comment: fantom:1251-16I5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011524 ! mouse natural helper cells- IL2 treated, day15 sample [Term] id: FF:1252-16G8 name: stomach, embryo E15, rep1 namespace: FANTOM5 comment: fantom:1252-16G8 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011523 ! mouse stomach- embryo E15 sample [Term] id: FF:1254-43D6 name: adrenal gland - embryo E16, rep1 namespace: FANTOM5 comment: fantom:1254-43D6 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011522 ! mouse adrenal gland - embryo E16 sample [Term] id: FF:12582-133I8 name: ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, rep3 (000hC6) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000488 ! mouse ST2 Mesenchymal stem cells, cells 0hr after medium change , without induction sample [Term] id: FF:1261-18D4 name: eyeball, embryo E17, rep1 namespace: FANTOM5 comment: fantom:1261-18D4 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011521 ! mouse eyeball- embryo E17 sample [Term] id: FF:1262-18F5 name: adrenal gland - embryo E18, rep1 namespace: FANTOM5 comment: fantom:1262-18F5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011518 ! adrenal gland - embryo E18 sample [Term] id: FF:12627-134E8 name: H9 Embryoid body cells, melanocytic induction, day00, rep1 (H9EB-1 d0) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000532 ! human H9 Embryoid body cells 0 days after melanocytic induction sample [Term] id: FF:1263-45I1 name: adrenal gland - embryo E17, rep1 namespace: FANTOM5 comment: fantom:1263-45I1 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011520 ! adrenal gland - embryo E17 sample [Term] id: FF:12641-134G4 name: Melanocyte, donor1 (MC+1) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000730 ! human melanocyte (MC) sample [Term] id: FF:12642-134G5 name: Aortic smooth muscle cell response to FGF2, 00hr00min, rep1 (LK1) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000546 ! human Aortic Smooth Muscle cells 0min after treatment with FGF2 sample [Term] id: FF:1265-44F5 name: pituitary gland, embryo E17, rep1 namespace: FANTOM5 comment: fantom:1265-44F5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011519 ! mouse pituitary gland- embryo E17 sample [Term] id: FF:12652-134H6 name: Aortic smooth muscle cell response to IL1b, 00hr00min, rep1 (LK31) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000556 ! human Aortic Smooth Muscle cells 0min after treatment with IL1b sample [Term] id: FF:1271-21F2 name: spleen, embryo E18, rep1 namespace: FANTOM5 comment: fantom:1271-21F2 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011517 ! mouse spleen-, embryo E18 sample [Term] id: FF:12724-135G6 name: H9 Embryonic Stem cells, rep2 (H9ES-2) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000592 ! human H9 Embryonic Stem cells sample [Term] id: FF:12725-135G7 name: H9 Embryoid body cells, melanocytic induction, day00, rep2 (H9EB-2 d0) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000532 ! human H9 Embryoid body cells 0 days after melanocytic induction sample [Term] id: FF:1273-19G4 name: thymus, embryo E18, rep1 namespace: FANTOM5 comment: fantom:1273-19G4 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011516 ! mouse thymus- embryo E18 sample [Term] id: FF:12739-135I3 name: Melanocyte, donor2 (MC+2) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000730 ! human melanocyte (MC) sample [Term] id: FF:12740-135I4 name: Aortic smooth muscle cell response to FGF2, 00hr00min, rep2 (LK2) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000546 ! human Aortic Smooth Muscle cells 0min after treatment with FGF2 sample [Term] id: FF:12750-136A5 name: Aortic smooth muscle cell response to IL1b, 00hr00min, rep2 (LK32) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000556 ! human Aortic Smooth Muscle cells 0min after treatment with IL1b sample [Term] id: FF:12760-136B6 name: Saos-2 osteosarcoma treated with ascorbic acid and BGP to induce calcification, 00hr00min, rep2 (A2 T0) namespace: FANTOM5 comment: A2 T0 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000593 ! human Saos2 osteosarcoma cell line 0min after induction of calcification with ascorbate and BPG sample [Term] id: FF:12822-136I5 name: H9 Embryonic Stem cells, rep3 (H9ES-3) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000592 ! human H9 Embryonic Stem cells sample [Term] id: FF:12823-136I6 name: H9 Embryoid body cells, melanocytic induction, day00, rep3 (H9EB-3 d0) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000532 ! human H9 Embryoid body cells 0 days after melanocytic induction sample [Term] id: FF:1283-20G3 name: heart, embryo E18, rep1 namespace: FANTOM5 comment: fantom:1283-20G3 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011515 ! mouse heart- embryo E18 sample [Term] id: FF:12837-137B2 name: Melanocyte, donor3 (MC+3) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000730 ! human melanocyte (MC) sample [Term] id: FF:12858-137D5 name: Saos-2 osteosarcoma treated with ascorbic acid and BGP to induce calcification, 00hr00min, rep3 (A3 T0) namespace: FANTOM5 comment: A3 T0 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000593 ! human Saos2 osteosarcoma cell line 0min after induction of calcification with ascorbate and BPG sample [Term] id: FF:1286-20C6 name: stomach, embryo E18, rep1 namespace: FANTOM5 comment: fantom:1286-20C6 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011514 ! mouse stomach- embryo E18 sample [Term] id: FF:1287-20I6 name: lung, embryo E18, rep1 namespace: FANTOM5 comment: fantom:1287-20I6 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011513 ! mouse lung- embryo E18 sample [Term] id: FF:1288-20C7 name: kidney, embryo E18, rep1 namespace: FANTOM5 comment: fantom:1288-20C7 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011512 ! mouse kidney- embryo E18 sample [Term] id: FF:1289-20F7 name: intestine, embryo E18, rep1 namespace: FANTOM5 comment: fantom:1289-20F7 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011511 ! mouse intestine- embryo E18 sample [Term] id: FF:12971-138H1 name: TSt-4/DLL1 feeder cells, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011508 ! mouse TSt-4/DLL1 feeder cells sample [Term] id: FF:12972-138H2 name: EBF KO HPCs induced to T cell, 00hr00min, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000729 ! mouse EBF KO HPCs induced to T cell 0h sample [Term] id: FF:12987-138I8 name: TSt-4/DLL1 feeder cells, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011508 ! mouse TSt-4/DLL1 feeder cells sample [Term] id: FF:12988-138I9 name: EBF KO HPCs induced to T cell, 00hr00min, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000729 ! mouse EBF KO HPCs induced to T cell 0h sample [Term] id: FF:1299-22I4 name: ovary, neonate N00, rep1 namespace: FANTOM5 comment: fantom:1299-22I4 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011510 ! mouse ovary, neonate N00 sample [Term] id: FF:13-16E8 name: hippocampus, adult, rep1 namespace: FANTOM5 comment: fantom:13-16E8 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000103 ! mouse sample is_a: FF:0010153 ! hippocampus - adult sample [Term] id: FF:1300-22B7 name: testis, neonate N00, rep1 namespace: FANTOM5 comment: fantom:1300-22B7 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011509 ! mouse testis- neonate N00 sample [Term] id: FF:13003-139B6 name: TSt-4/DLL1 feeder cells, rep3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011508 ! mouse TSt-4/DLL1 feeder cells sample [Term] id: FF:13004-139B7 name: EBF KO HPCs induced to T cell 0h, rep3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000729 ! mouse EBF KO HPCs induced to T cell 0h sample [Term] id: FF:13063-139I3 name: J2E erythroblastic leukemia line 0min after treatment with erythropoietin rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000498 ! mouse J2E erythroblastic leukemia line 0min after treatment with erythropoietin sample [Term] id: FF:1308-22E9 name: pituitary gland, neonate N00, rep1 namespace: FANTOM5 comment: fantom:1308-22E9 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011507 ! mouse pituitary gland- neonate N00 sample [Term] id: FF:13097-140D1 name: MCF7 breast cancer cell line response to EGF1, 00hr00min, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000426 ! human MCF7 breast cancer cell line 0min after EGF1 treatment sample [Term] id: FF:1310-23B1 name: epididymis and seminiferous tubule, neonate N00, rep1 namespace: FANTOM5 comment: fantom:1310-23B1 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011506 ! mouse epididymis and seminiferous tubule- neonate N00 sample [Term] id: FF:1311-23C1 name: adrenal gland - neonate N0 namespace: FANTOM5 comment: fantom:1311-23C1 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011505 ! mouse adrenal gland - neonate N00 sample [Term] id: FF:13129-140G6 name: J2E erythroblastic leukemia response to erythropoietin, 00hr00min, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000498 ! mouse J2E erythroblastic leukemia line 0min after treatment with erythropoietin sample [Term] id: FF:13163-141B4 name: MCF7 breast cancer cell line response to EGF1, 00hr00min, rep3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000426 ! human MCF7 breast cancer cell line 0min after EGF1 treatment sample [Term] id: FF:13195-141E9 name: J2E erythroblastic leukemia response to erythropoietin, 00hr00min, rep3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000498 ! mouse J2E erythroblastic leukemia line 0min after treatment with erythropoietin sample [Term] id: FF:1322-23E9 name: intestine, neonate N01, rep1 namespace: FANTOM5 comment: fantom:1322-23E9 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011265 ! mouse intestine- neonate N00 sample is_a: FF:0011504 ! mouse intestine- neonate N01 sample [Term] id: FF:13230-141I8 name: mesenchymal stem cells (adipose derived), adipogenic induction, 00hr00min, rep2 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000690 ! human mesenchymal stem cells adipose derived, 0 minutes after adipogenic induction sample [Term] id: FF:13231-141I9 name: mesenchymal stem cells (adipose derived), adipogenic induction, 00hr00min, rep3 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000690 ! human mesenchymal stem cells adipose derived, 0 minutes after adipogenic induction sample [Term] id: FF:13283-142F7 name: trophoblast stem cell line R1AB differentiation, day00, rep1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011194 ! mouse trophoblast stem cell line R1AB differentiation- day00 sample [Term] id: FF:13290-142G5 name: trophoblast stem cell line Rybp differentiation, day00, rep1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011201 ! mouse trophoblast stem cell line Rybp differentiation- day00 sample [Term] id: FF:13297-142H3 name: trophoblast stem cell line B1 differentiation, day00, rep1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011275 ! mouse trophoblast stem cell line B1 differentiation- day00 sample [Term] id: FF:13311-142I8 name: Monocyte-derived macrophages 0h after udorn influenza infection (227_121:Ud_0h) namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011215 ! human Monocyte-derived macrophages 0h after udorn influenza infection sample [Term] id: FF:13317-143A5 name: Monocyte-derived macrophages 0h after udorn influenza infection (150_120:Ud_0h) namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011215 ! human Monocyte-derived macrophages 0h after udorn influenza infection sample [Term] id: FF:13323-143B2 name: Monocyte-derived macrophages 0h after udorn influenza infection (536_119:Ud_0h) namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011215 ! human Monocyte-derived macrophages 0h after udorn influenza infection sample [Term] id: FF:13366-143F9 name: HES3-GFP Embryonic Stem cells, cardiomyocytic induction, day00, biol_rep3 (UH-3) namespace: FANTOM comment: Previously: UH-3, rep3. TODO: full classification subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000210 ! human sample [Term] id: FF:13367-143G1 name: tracheal ciliated cells differentiation after 0hr, rep1 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011232 ! mouse tracheal ciliated cells differentiation after 0hr sample [Term] id: FF:13368-143G2 name: tracheal ciliated cells differentiation after 0hr, rep2 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011232 ! mouse tracheal ciliated cells differentiation after 0hr sample [Term] id: FF:13369-143G3 name: tracheal ciliated cells differentiation after 0hr, rep3 namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011232 ! mouse tracheal ciliated cells differentiation after 0hr sample [Term] id: FF:1340-24B8 name: stomach, neonate N03, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011498 ! mouse stomach, neonate N03 sample [Term] id: FF:13425-144D5 name: iPS differentiation to neuron, control donor C11-CRL2429, day00, rep2 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0000210 ! human sample is_a: FF:0200003 ! iPS differentiation to neuron, control sample [Term] id: FF:13433-144E4 name: iPS differentiation to neuron, control donor C32-CRL1502, day00, rep1 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0000210 ! human sample is_a: FF:0200003 ! iPS differentiation to neuron, control sample [Term] id: FF:13437-144E8 name: iPS differentiation to neuron, control donor C32-CRL1502, day00, rep2 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0000210 ! human sample is_a: FF:0200003 ! iPS differentiation to neuron, control sample [Term] id: FF:1345-25G2 name: liver, neonate N03, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011484 ! mouse liver- neonate N03 sample [Term] id: FF:13469-144I4 name: Myoblast differentiation to myotubes, day00, control donor1 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0000210 ! human sample is_a: FF:0200006 ! myoblast differentiation to myotubes, control sample [Term] id: FF:1349-25I2 name: heart, neonate N03, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011474 ! mouse heart- neonate N03 sample [Term] id: FF:1350-25C3 name: bone- os femoris - neonate N20, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011467 ! mouse bone- os femoris - neonate N20 sample [Term] id: FF:1351-25D3 name: heart, neonate N25, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011475 ! mouse heart- neonate N25 sample [Term] id: FF:1352-25E3 name: intestine, neonate N25, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011480 ! mouse intestine- neonate N25 sample [Term] id: FF:1353-25F3 name: kidney, neonate N25, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011482 ! mouse kidney- neonate N25 sample [Term] id: FF:1354-25G3 name: spleen, neonate N25, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011491 ! mouse spleen- neonate N25 sample [Term] id: FF:1355-25E4 name: stomach, neonate N25, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011493 ! mouse stomach- neonate N25 sample [Term] id: FF:1359-25C7 name: lung, neonate N25, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011488 ! mouse lung- neonate N25 sample [Term] id: FF:1362-25G7 name: thymus, neonate N25, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011496 ! mouse thymus- neonate N25 sample [Term] id: FF:1368-26H1 name: liver, neonate N25, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011485 ! mouse liver- neonate N25 sample [Term] id: FF:1377-27I3 name: adrenal gland - neonate N25, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011466 ! mouse adrenal gland - neonate N25 sample [Term] id: FF:1382-42D1 name: liver, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011486 ! mouse liver- neonate N30 sample [Term] id: FF:1384-42G1 name: intestine, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011481 ! mouse intestine- neonate N30 sample [Term] id: FF:1385-42H1 name: kidney, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011483 ! mouse kidney- neonate N30 sample [Term] id: FF:1386-42I1 name: stomach, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011494 ! mouse stomach- neonate N30 sample [Term] id: FF:1387-42A2 name: epididymis and seminiferous tubule, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011471 ! mouse epididymis and seminiferous tubule- neonate N30 sample [Term] id: FF:1388-42B2 name: diencephalon, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011470 ! mouse diencephalon- neonate N30 sample [Term] id: FF:1389-42C2 name: muscle - biceps femoris, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011490 ! mouse muscle - biceps femoris- neonate N30 sample [Term] id: FF:1390-42D2 name: heart, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011476 ! mouse heart- neonate N30 sample [Term] id: FF:1391-42E2 name: testis, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011495 ! mouse testis- neonate N30 sample [Term] id: FF:1392-42F2 name: cortex, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011469 ! mouse cortex- neonate N30 sample [Term] id: FF:1393-42G2 name: thymus, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011497 ! mouse thymus- neonate N30 sample [Term] id: FF:1394-42H2 name: lung, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011489 ! mouse lung- neonate N30 sample [Term] id: FF:1395-42I2 name: cerebellum, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011250 ! mouse cerebellum- neonate N30 sample [Term] id: FF:1396-42A3 name: medulla oblongata, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011465 ! mouse medulla oblongata- neonate N30 sample [Term] id: FF:14302-155B9 name: Fibroblast - skin normal, donor2 (nuclear fraction) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000668 ! human Fibroblast - skin normal, nuclear fraction sample [Term] id: FF:14305-155C3 name: Fibroblast - skin spinal muscular atrophy, donor3 (nuclear fraction) namespace: FANTOM5 subset: phase1 subset: update022 is_a: FF:0000670 ! human Fibroblast - skin spinal muscular atrophy, nuclear fraction sample [Term] id: FF:14308-155C6 name: Fibroblast - skin dystrophia myotonica, donor3 (nuclear fraction) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000667 ! human Fibroblast - skin dystrophia myotonica, nuclear fraction sample [Term] id: FF:14311-155C9 name: Fibroblast - Aortic Adventitial, donor3 (nuclear fraction) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000666 ! human Fibroblast - Aortic Adventitial, nuclear fraction sample [Term] id: FF:14313-155D2 name: Smooth Muscle Cells - Aortic, donor0 (cytoplasmic fraction) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000664 ! Smooth Muscle Cells - Aortic, (cytoplasmic fraction) sample [Term] id: FF:14314-155D3 name: Smooth Muscle Cells - Aortic, donor0 nuclear fraction namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000672 ! human Smooth Muscle Cells - Aortic, nuclear fraction sample [Term] id: FF:14317-155D6 name: Small Airway Epithelial Cells, donor3 nuclear fraction namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000673 ! human Small Airway Epithelial Cells, nuclear fraction sample [Term] id: FF:14320-155D9 name: Preadipocyte - breast, donor2 nuclear fraction tech rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000671 ! human Preadipocyte - breast, nuclear fraction sample [Term] id: FF:14323-155E3 name: Fibroblast - skin normal, donor1 (nuclear fraction) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000668 ! human Fibroblast - skin normal, nuclear fraction sample [Term] id: FF:14326-155E6 name: Fibroblast - skin spinal muscular atrophy, donor1 (nuclear fraction) namespace: FANTOM5 subset: phase1 subset: update022 is_a: FF:0000670 ! human Fibroblast - skin spinal muscular atrophy, nuclear fraction sample [Term] id: FF:14329-155E9 name: Fibroblast - skin dystrophia myotonica, donor1 (nuclear fraction) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000667 ! human Fibroblast - skin dystrophia myotonica, nuclear fraction sample [Term] id: FF:14332-155F3 name: Fibroblast - Aortic Adventitial, donor2 (nuclear fraction) namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000666 ! human Fibroblast - Aortic Adventitial, nuclear fraction sample [Term] id: FF:15-8B2 name: mouse cerebellum - adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011276 ! mouse cerebellum - adult sample [Term] id: FF:1517-43C4 name: forelimb, embryo E17, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011277 ! mouse forelimb- embryo E17 sample [Term] id: FF:1520-43B5 name: forelimb, embryo E18, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011278 ! mouse forelimb- embryo E18 sample [Term] id: FF:1525-43A6 name: bone- os femoris - neonate N16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011462 ! mouse bone- os femoris - neonate N16 sample [Term] id: FF:1531-43D7 name: pancreas, neonate N01, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011251 ! mouse pancreas- neonate N01 sample [Term] id: FF:1532-43E7 name: eyeball, neonate N01, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011252 ! mouse eyeball- neonate N01 sample [Term] id: FF:1535-43I7 name: pancreas, embryo E18, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011253 ! mouse pancreas- embryo E18 sample [Term] id: FF:1539-43D8 name: pancreas, neonate N02, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011254 ! mouse pancreas- neonate N02 sample [Term] id: FF:1541-43F8 name: thymus, neonate N02, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011280 ! mouse thymus- neonate N02 sample [Term] id: FF:1548-44H5 name: pancreas, neonate N30, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011255 ! mouse pancreas- neonate N30 sample [Term] id: FF:1551-44G8 name: eyeball, neonate N02, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011281 ! mouse eyeball- neonate N02 sample [Term] id: FF:1555-45E2 name: pancreas, neonate N25, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011256 ! mouse pancreas- neonate N25 sample [Term] id: FF:1556-45F2 name: pancreas, embryo E15, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011257 ! mouse pancreas- embryo E15 sample [Term] id: FF:1558-45G3 name: pancreas, embryo E17, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011258 ! mouse pancreas- embryo E17 sample [Term] id: FF:1564-45I6 name: gonad, embryo E13, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011282 ! mouse gonad- embryo E13 sample [Term] id: FF:16-22A4 name: corpora quadrigemina, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011283 ! mouse corpora quadrigemina- adult sample [Term] id: FF:17-12C2 name: medulla oblongata, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011284 ! mouse medulla oblongata- adult sample [Term] id: FF:178-9A3 name: intestine, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011285 ! mouse intestine- adult sample [Term] id: FF:18-22I9 name: olfactory brain, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011286 ! mouse olfactory brain- adult sample [Term] id: FF:1830-49C7 name: mouse fibroblast cell line: CRL-1658 NIH/3T3, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: FF:0011287 ! mouse fibroblast cell line: CRL-1658 NIH/3T3 sample [Term] id: FF:19-21D8 name: corpus striatum, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011288 ! mouse corpus striatum- adult sample [Term] id: FF:1985-43F5 name: bone- os femoris - neonate N2, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011463 ! mouse bone- os femoris - neonate N2 sample [Term] id: FF:20-12F2 name: diencephalon, adult namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0010193 ! human diencephalon - adult sample [Term] id: FF:21-1G8 name: pituitary gland, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011303 ! mouse pituitary gland- adult sample [Term] id: FF:2104-43C7 name: thymus, neonate N03, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011304 ! mouse thymus- neonate N03 sample [Term] id: FF:24-13C9 name: spinal cord, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011305 ! mouse spinal cord- adult sample [Term] id: FF:25-2G2 name: spleen, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011306 ! mouse spleen- adult sample [Term] id: FF:28-22B1 name: lung, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011307 ! mouse lung- adult sample relationship: derives_from UBERON:0002048 ! lung [Term] id: FF:30-1C3 name: skin, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011308 ! mouse skin- adult sample [Term] id: FF:31-12G4 name: eyeball, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011309 ! mouse eyeball- adult sample [Term] id: FF:3139-67G5 name: whole body, embryo E17.5, pool1 (internal control) namespace: FANTOM subset: phase1 subset: update022 is_a: EFO:0001461 ! control is_a: FF:0011374 ! mouse whole body- embryo E17.5 sample [Term] id: FF:32-1B4 name: mouse tongue, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011310 ! mouse tongue- adult sample [Term] id: FF:324-5I8 name: whole body, embryo E11, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011311 ! mouse whole body- embryo E11 sample [Term] id: FF:33-1H6 name: stomach, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011312 ! mouse stomach- adult sample [Term] id: FF:331-24E9 name: heart, embryo E11, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011313 ! mouse heart- embryo E11 sample [Term] id: FF:335-25E2 name: forelimb, embryo E11, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011314 ! mouse forelimb- embryo E11 sample [Term] id: FF:34-16E4 name: pancreas, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011315 ! mouse pancreas- adult sample [Term] id: FF:345-16C6 name: eyeball, embryo E12, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011316 ! mouse eyeball- embryo E12 sample [Term] id: FF:346-16E6 name: pituitary gland, embryo E12, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011317 ! mouse pituitary gland- embryo E12 sample [Term] id: FF:353-12F5 name: heart, embryo E12, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011318 ! mouse heart- embryo E12 sample [Term] id: FF:354-16G2 name: lung, embryo E12, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011319 ! mouse lung- embryo E12 sample [Term] id: FF:355-15F8 name: liver, embryo E12, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011320 ! mouse liver- embryo E12 sample [Term] id: FF:356-43E3 name: stomach, embryo E12, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011321 ! mouse stomach- embryo E12 sample [Term] id: FF:3560-170A1 name: macrophage, bone marrow derived, pool1 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0000103 ! mouse sample is_a: FF:0200021 ! macrophage, bone marrow-derived sample [Term] id: FF:359-14H2 name: forelimb, embryo E12, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011322 ! mouse forelimb- embryo E12 sample [Term] id: FF:36-18H7 name: colon, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011323 ! mouse colon- adult sample [Term] id: FF:3632-171A1 name: macrophage, bone marrow derived, pool2 namespace: FANTOM subset: phase1 subset: update022 is_a: FF:0000103 ! mouse sample is_a: FF:0200021 ! macrophage, bone marrow-derived sample [Term] id: FF:37-13H4 name: cecum - adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011324 ! mouse cecum - adult sample [Term] id: FF:370-44C7 name: pituitary gland, embryo E13, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011325 ! mouse pituitary gland- embryo E13 sample [Term] id: FF:372-23H2 name: whole body, embryo E13, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011326 ! mouse whole body- embryo E13 sample [Term] id: FF:376-3I9 name: heart, embryo E13, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011327 ! mouse heart- embryo E13 sample [Term] id: FF:378-3H6 name: liver, embryo E13, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011328 ! mouse liver- embryo E13 sample [Term] id: FF:38-12B5 name: thymus, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011329 ! mouse thymus- adult sample [Term] id: FF:381-16D5 name: intestine, embryo E13, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011330 ! mouse intestine- embryo E13 sample [Term] id: FF:384-1E2 name: forelimb, embryo E13, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011331 ! mouse forelimb- embryo E13 sample [Term] id: FF:389-23F5 name: testis, embryo E13, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011332 ! mouse testis- embryo E13 sample [Term] id: FF:395-14B1 name: whole body, embryo E14, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011333 ! mouse whole body- embryo E14 sample [Term] id: FF:398-44A5 name: pituitary gland, embryo E14, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011334 ! mouse pituitary gland- embryo E14 sample [Term] id: FF:399-16E2 name: eyeball, embryo E14, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011335 ! mouse eyeball- embryo E14 sample [Term] id: FF:402-44I4 name: thymus, embryo E14, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011336 ! mouse thymus- embryo E14 sample [Term] id: FF:403-26D4 name: heart, embryo E14, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011337 ! mouse heart- embryo E14 sample [Term] id: FF:404-26F8 name: lung, embryo E14, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011338 ! mouse lung- embryo E14 sample [Term] id: FF:405-44F4 name: pancreas, embryo E14, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011262 ! mouse pancreas- embryo E14 sample [Term] id: FF:406-44C5 name: adrenal gland - embryo E14, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011339 ! mouse adrenal gland - embryo E14 sample [Term] id: FF:409-16E1 name: liver, embryo E14, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011340 ! mouse liver- embryo E14 sample [Term] id: FF:411-4I9 name: kidney, embryo E14, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011341 ! mouse kidney- embryo E14 sample [Term] id: FF:413-26A8 name: forelimb, embryo E14, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011342 ! mouse forelimb- embryo E14 sample [Term] id: FF:420-27D2 name: whole body, embryo E14.5, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011343 ! mouse whole body- embryo E14.5 sample [Term] id: FF:426-16C9 name: eyeball, embryo E15, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011344 ! mouse eyeball- embryo E15 sample [Term] id: FF:427-16B9 name: pituitary gland, embryo E15, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011345 ! mouse pituitary gland- embryo E15 sample [Term] id: FF:430-45I2 name: thymus, embryo E15, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011346 ! mouse thymus- embryo E15 sample [Term] id: FF:431-16C8 name: heart, embryo E15, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011347 ! mouse heart- embryo E15 sample [Term] id: FF:432-17C5 name: lung, embryo E15, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011348 ! mouse lung- embryo E15 sample [Term] id: FF:433-16D7 name: liver, embryo E15, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011349 ! mouse liver- embryo E15 sample [Term] id: FF:434-16F8 name: kidney, embryo E15, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011350 ! mouse kidney- embryo E15 sample [Term] id: FF:437-20E7 name: forelimb, embryo E15, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011351 ! mouse forelimb- embryo E15 sample [Term] id: FF:443-27C5 name: testis, embryo E15, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011352 ! mouse testis- embryo E15 sample [Term] id: FF:449-43F6 name: pituitary gland, embryo E16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011353 ! mouse pituitary gland- embryo E16 sample [Term] id: FF:453-14F2 name: whole body, embryo E16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011354 ! mouse whole body- embryo E16 sample [Term] id: FF:456-26C5 name: thymus, embryo E16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011355 ! mouse thymus- embryo E16 sample [Term] id: FF:457-17C6 name: heart, embryo E16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011356 ! mouse heart- embryo E16 sample [Term] id: FF:458-17B6 name: lung, embryo E16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011357 ! mouse lung- embryo E16 sample [Term] id: FF:459-17D4 name: stomach, embryo E16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011358 ! mouse stomach- embryo E16 sample [Term] id: FF:46-23H1 name: mouse aorta - adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011359 ! mouse aorta - adult sample [Term] id: FF:460-26E5 name: pancreas, embryo E16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011263 ! mouse pancreas- embryo E16 sample [Term] id: FF:461-43C1 name: spleen, embryo E16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011360 ! mouse spleen- embryo E16 sample [Term] id: FF:462-17F5 name: liver, embryo E16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011361 ! mouse liver- embryo E16 sample [Term] id: FF:463-22H4 name: intestine, embryo E16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011362 ! mouse intestine- embryo E16 sample [Term] id: FF:464-22A5 name: kidney, embryo E16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011363 ! mouse kidney- embryo E16 sample [Term] id: FF:470-26G5 name: testis, embryo E16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011364 ! mouse testis- embryo E16 sample [Term] id: FF:475-3I5 name: whole body, embryo E17, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011365 ! mouse whole body- embryo E17 sample [Term] id: FF:478-18C1 name: thymus, embryo E17, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011366 ! mouse thymus- embryo E17 sample [Term] id: FF:479-18E5 name: heart, embryo E17, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011367 ! mouse heart- embryo E17 sample [Term] id: FF:480-44A6 name: lung, embryo E17, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011368 ! mouse lung- embryo E17 sample [Term] id: FF:481-18A3 name: liver, embryo E17, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011369 ! mouse liver- embryo E17 sample [Term] id: FF:482-18D3 name: intestine, embryo E17, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011370 ! mouse intestine- embryo E17 sample [Term] id: FF:483-18I2 name: kidney, embryo E17, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011371 ! mouse kidney- embryo E17 sample [Term] id: FF:486-18I5 name: testis, embryo E17, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011372 ! mouse testis- embryo E17 sample [Term] id: FF:49-24D7 name: mouse adrenal gland - adult rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011373 ! mouse adrenal gland - adult sample [Term] id: FF:490-9F9 name: whole body, embryo E17.5, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011374 ! mouse whole body- embryo E17.5 sample [Term] id: FF:493-3B3 name: whole body, embryo E18, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011375 ! mouse whole body- embryo E18 sample [Term] id: FF:499-43G4 name: liver, embryo E18, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011376 ! mouse liver- embryo E18 sample [Term] id: FF:503-18G5 name: testis, embryo E18, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011377 ! mouse testis- embryo E18 sample [Term] id: FF:505-44H7 name: ovary, embryo E18, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011378 ! mouse ovary- embryo E18 sample [Term] id: FF:508-5B2 name: liver, adult pregnant day01, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011379 ! mouse liver- adult pregnant day01 sample [Term] id: FF:51-27F8 name: vesicular gland, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011380 ! mouse vesicular gland- adult sample [Term] id: FF:539-13I7 name: placenta, adult pregnant day10, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011381 ! mouse placenta- adult pregnant day10 sample [Term] id: FF:56-12G2 name: bone- os femoris - adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011464 ! mouse bone- os femoris - adult sample [Term] id: FF:57-7G5 name: testis, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011383 ! mouse testis- adult sample [Term] id: FF:577-18G3 name: placenta, adult pregnant day17, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011384 ! mouse placenta- adult pregnant day17 sample [Term] id: FF:58-23B2 name: mouse epididymis- adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0000103 ! mouse sample is_a: FF:0011289 ! epididymis- adult sample [Term] id: FF:583-22A8 name: amnion - adult pregnant day17.5, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011386 ! mouse amnion - adult pregnant day17.5 sample [Term] id: FF:588-5H2 name: mammary gland, adult pregnant day19, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011387 ! mouse mammary gland- adult pregnant day19 sample [Term] id: FF:59-29C1 name: submandibular gland, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011388 ! mouse submandibular gland- adult sample [Term] id: FF:590-15F5 name: uterus, adult pregnant day19, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011389 ! mouse uterus- adult pregnant day19 sample [Term] id: FF:595-22B6 name: mammary gland, adult lactating day02, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011390 ! mouse mammary gland- adult lactating day02 sample [Term] id: FF:627-43G1 name: hippocampus, neonate N00, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011391 ! mouse hippocampus- neonate N00 sample [Term] id: FF:630-43F1 name: corpus striatum, neonate N00, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011392 ! mouse corpus striatum- neonate N00 sample [Term] id: FF:633-15C6 name: eyeball, neonate N00, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011264 ! mouse eyeball- neonate N00 sample [Term] id: FF:639-21E3 name: heart, neonate N00, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011393 ! mouse heart- neonate N00 sample [Term] id: FF:640-42C6 name: lung, neonate N00, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011394 ! mouse lung- neonate N00 sample [Term] id: FF:641-24F4 name: liver, neonate N00, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011395 ! mouse liver- neonate N00 sample [Term] id: FF:644-26D1 name: intestine, neonate N00, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011265 ! mouse intestine- neonate N00 sample [Term] id: FF:645-26G9 name: pancreas, neonate N00, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011266 ! mouse pancreas- neonate N00 sample [Term] id: FF:646-21G7 name: kidney, neonate N00, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011396 ! mouse kidney- neonate N00 sample [Term] id: FF:650-25G4 name: skin, neonate N00, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011397 ! mouse skin- neonate N00 sample [Term] id: FF:657-19C2 name: whole body, neonate N00, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011398 ! mouse whole body- neonate N00 sample [Term] id: FF:659-23C6 name: whole body, neonate N01, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011398 ! mouse whole body- neonate N00 sample is_a: FF:0011399 ! mouse whole body- neonate N01 sample [Term] id: FF:662-22H3 name: skin, neonate N03, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011400 ! mouse skin- neonate N03 sample [Term] id: FF:681-26C4 name: thymus, neonate N06, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011401 ! mouse thymus- neonate N06 sample [Term] id: FF:683-20E5 name: lung, neonate N06, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011402 ! mouse lung- neonate N06 sample [Term] id: FF:684-20A8 name: liver, neonate N06, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011403 ! mouse liver- neonate N06 sample [Term] id: FF:688-20B8 name: intestine, neonate N06, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011404 ! mouse intestine- neonate N06 sample [Term] id: FF:692-21D1 name: whole body, neonate N06, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011405 ! mouse whole body- neonate N06 sample [Term] id: FF:693-20I5 name: skin, neonate N06, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011406 ! mouse skin- neonate N06 sample [Term] id: FF:713-19D3 name: thymus, neonate N07, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011407 ! mouse thymus- neonate N07 sample [Term] id: FF:715-19A3 name: lung, neonate N07, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011408 ! mouse lung- neonate N07 sample [Term] id: FF:716-20H2 name: liver, neonate N07, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011409 ! mouse liver- neonate N07 sample [Term] id: FF:718-18A9 name: stomach, neonate N07, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011410 ! mouse stomach- neonate N07 sample [Term] id: FF:720-20F2 name: intestine, neonate N07, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011411 ! mouse intestine- neonate N07 sample [Term] id: FF:726-26I4 name: testis, neonate N07, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011412 ! mouse testis- neonate N07 sample [Term] id: FF:748-24E4 name: thymus, neonate N10, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011413 ! mouse thymus- neonate N10 sample [Term] id: FF:749-24G1 name: heart, neonate N10, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011414 ! mouse heart- neonate N10 sample [Term] id: FF:750-23E6 name: lung, neonate N10, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011415 ! mouse lung- neonate N10 sample [Term] id: FF:751-24B9 name: liver, neonate N10, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011416 ! mouse liver- neonate N10 sample [Term] id: FF:752-24D1 name: spleen, neonate N10, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011417 ! mouse spleen- neonate N10 sample [Term] id: FF:755-23A5 name: intestine, neonate N10, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011418 ! mouse intestine- neonate N10 sample [Term] id: FF:758-6D5 name: kidney, neonate N10, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011419 ! mouse kidney- neonate N10 sample [Term] id: FF:761-6B4 name: whole body, neonate N10, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011420 ! mouse whole body- neonate N10 sample [Term] id: FF:762-6C4 name: skin, neonate N10, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011421 ! mouse skin- neonate N10 sample [Term] id: FF:763-44D9 name: testis, neonate N10, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011422 ! mouse testis- neonate N10 sample [Term] id: FF:777-19A2 name: eyeball, neonate N16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011423 ! mouse eyeball- neonate N16 sample [Term] id: FF:782-15G1 name: heart, neonate N16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011424 ! mouse heart- neonate N16 sample [Term] id: FF:787-43B6 name: pancreas, neonate N16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011267 ! mouse pancreas- neonate N16 sample [Term] id: FF:790-21I1 name: small intestine, neonate N16, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011425 ! mouse small intestine- neonate N16 sample [Term] id: FF:820-7A2 name: thymus, neonate N20, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011426 ! mouse thymus- neonate N20 sample [Term] id: FF:821-26I6 name: heart, neonate N20, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011427 ! mouse heart- neonate N20 sample [Term] id: FF:822-18A4 name: lung, neonate N20, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011428 ! mouse lung- neonate N20 sample [Term] id: FF:823-25A3 name: liver, neonate N20, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011429 ! mouse liver- neonate N20 sample [Term] id: FF:824-19H1 name: spleen, neonate N20, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011430 ! mouse spleen- neonate N20 sample [Term] id: FF:827-18D1 name: intestine, neonate N20, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011431 ! mouse intestine- neonate N20 sample [Term] id: FF:832-19I1 name: kidney, neonate N20, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011432 ! mouse kidney- neonate N20 sample [Term] id: FF:839-18H3 name: testis, neonate N20, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011433 ! mouse testis- neonate N20 sample [Term] id: FF:857-27C9 name: whole body, embryo E12, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011434 ! mouse whole body- embryo E12 sample [Term] id: FF:859-1F8 name: prostate, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011435 ! mouse prostate- adult sample [Term] id: FF:860-29I3 name: intestinal mucosa, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011436 ! mouse intestinal mucosa- adult sample [Term] id: FF:879-12E4 name: urinary bladder, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011437 ! mouse urinary bladder- adult sample [Term] id: FF:89-27D5 name: mouse vagina, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011438 ! mouse vagina- adult sample [Term] id: FF:91-2I7 name: ovary, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011439 ! mouse ovary- adult sample [Term] id: FF:92-27E5 name: uterus, adult, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011440 ! mouse uterus- adult sample [Term] id: FF:976-16D8 name: intestine, embryo E15, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011441 ! mouse intestine- embryo E15 sample [Term] id: FF:988-6G6 name: oviduct, adult pregnant day01, rep1 namespace: FANTOM5 subset: phase1 subset: update022 is_a: EFO:0002091 ! biological replicate is_a: FF:0011442 ! mouse oviduct- adult pregnant day01 sample [Term] id: IAO:0000030 name: information entity namespace: FANTOM is_a: EFO:0000001 ! experimental factor [Term] id: MaterialEntity name: material entity namespace: FANTOM is_a: EFO:0000001 ! experimental factor [Term] id: NCBITaxon:1 name: root namespace: FANTOM [Term] id: NCBITaxon:10066 name: Muridae namespace: FANTOM is_a: NCBITaxon:337687 ! Muroidea [Term] id: NCBITaxon:10088 name: Mus namespace: FANTOM is_a: NCBITaxon:39107 ! Murinae [Term] id: NCBITaxon:10090 name: Mus musculus namespace: FANTOM is_a: NCBITaxon:10088 ! Mus is_a: NCBITaxon_10088 ! Mus [Term] id: NCBITaxon:117570 name: Teleostomi namespace: FANTOM is_a: NCBITaxon:7776 ! Gnathostomata [Term] id: NCBITaxon:117571 name: Euteleostomi namespace: FANTOM is_a: NCBITaxon:117570 ! Teleostomi [Term] id: NCBITaxon:131567 name: cellular organisms namespace: FANTOM is_a: NCBITaxon:1 ! root [Term] id: NCBITaxon:207598 name: Homininae namespace: FANTOM is_a: NCBITaxon:9604 ! Hominidae [Term] id: NCBITaxon:2759 name: Eukaryota namespace: FANTOM is_a: NCBITaxon:131567 ! cellular organisms [Term] id: NCBITaxon:314146 name: Euarchontoglires namespace: FANTOM is_a: NCBITaxon:9347 ! Eutheria [Term] id: NCBITaxon:314147 name: Glires namespace: FANTOM is_a: NCBITaxon:314146 ! Euarchontoglires [Term] id: NCBITaxon:314293 name: Simiiformes namespace: FANTOM is_a: NCBITaxon:376913 ! Haplorrhini [Term] id: NCBITaxon:314295 name: Hominoidea namespace: FANTOM is_a: NCBITaxon:9526 ! Catarrhini [Term] id: NCBITaxon:32523 name: Tetrapoda namespace: FANTOM is_a: NCBITaxon:8287 ! Sarcopterygii [Term] id: NCBITaxon:32524 name: Amniota namespace: FANTOM is_a: NCBITaxon:32523 ! Tetrapoda [Term] id: NCBITaxon:32525 name: Theria namespace: FANTOM is_a: NCBITaxon:40674 ! Mammalia [Term] id: NCBITaxon:33154 name: Opisthokonta namespace: FANTOM is_a: NCBITaxon:2759 ! Eukaryota [Term] id: NCBITaxon:33208 name: Metazoa namespace: FANTOM is_a: NCBITaxon:33154 ! Opisthokonta [Term] id: NCBITaxon:33213 name: Bilateria namespace: FANTOM is_a: NCBITaxon:6072 ! Eumetazoa [Term] id: NCBITaxon:33511 name: Deuterostomia namespace: FANTOM is_a: NCBITaxon:33213 ! Bilateria [Term] id: NCBITaxon:33553 name: Sciurognathi namespace: FANTOM is_a: NCBITaxon:9989 ! Rodentia [Term] id: NCBITaxon:337687 name: Muroidea namespace: FANTOM is_a: NCBITaxon:33553 ! Sciurognathi [Term] id: NCBITaxon:376913 name: Haplorrhini namespace: FANTOM is_a: NCBITaxon:9443 ! Primates [Term] id: NCBITaxon:39107 name: Murinae namespace: FANTOM is_a: NCBITaxon:10066 ! Muridae [Term] id: NCBITaxon:40674 name: Mammalia namespace: FANTOM is_a: NCBITaxon:32524 ! Amniota [Term] id: NCBITaxon:6072 name: Eumetazoa namespace: FANTOM is_a: NCBITaxon:33208 ! Metazoa [Term] id: NCBITaxon:7711 name: Chordata namespace: FANTOM is_a: NCBITaxon:33511 ! Deuterostomia [Term] id: NCBITaxon:7742 name: Vertebrata namespace: FANTOM is_a: NCBITaxon:89593 ! Craniata [Term] id: NCBITaxon:7776 name: Gnathostomata namespace: FANTOM is_a: NCBITaxon:7742 ! Vertebrata [Term] id: NCBITaxon:8287 name: Sarcopterygii namespace: FANTOM is_a: NCBITaxon:117571 ! Euteleostomi [Term] id: NCBITaxon:89593 name: Craniata namespace: FANTOM is_a: NCBITaxon:7711 ! Chordata [Term] id: NCBITaxon:9347 name: Eutheria namespace: FANTOM is_a: NCBITaxon:32525 ! Theria [Term] id: NCBITaxon:9443 name: Primates namespace: FANTOM is_a: NCBITaxon:314146 ! Euarchontoglires [Term] id: NCBITaxon:9526 name: Catarrhini namespace: FANTOM is_a: NCBITaxon:314293 ! Simiiformes [Term] id: NCBITaxon:9604 name: Hominidae namespace: FANTOM is_a: NCBITaxon:314295 ! Hominoidea [Term] id: NCBITaxon:9605 name: Homo namespace: FANTOM is_a: NCBITaxon:207598 ! Homininae [Term] id: NCBITaxon:9606 name: Homo sapiens namespace: FANTOM is_a: NCBITaxon:9605 ! Homo is_a: NCBITaxon_2759 ! Eukaryota [Term] id: NCBITaxon:9989 name: Rodentia namespace: FANTOM is_a: NCBITaxon:314147 ! Glires [Term] id: NCBITaxon_10088 name: Mus namespace: FANTOM is_a: NCBITaxon_2759 ! Eukaryota [Term] id: NCBITaxon_2759 name: Eukaryota namespace: FANTOM is_a: OBI:0100026 ! organism [Term] id: OBI:0000272 name: protocol namespace: FANTOM is_a: IAO:0000030 ! information entity [Term] id: OBI:0100026 name: organism namespace: FANTOM is_a: MaterialEntity ! material entity is_a: snap:Object ! object [Term] id: ProcessualEntity name: process namespace: FANTOM is_a: EFO:0000001 ! experimental factor [Term] id: Role name: role namespace: FANTOM is_a: SpecificallyDependentContinuant ! material property [Term] id: SpecificallyDependentContinuant name: material property namespace: FANTOM is_a: EFO:0000001 ! experimental factor [Term] id: UBERON:0000002 name: uterine cervix namespace: FANTOM is_a: UBERON:0001560 ! neck of organ is_a: UBERON:0005156 ! reproductive structure is_a: UBERON:0014404 ! female anatomical structure relationship: part_of UBERON:0000995 ! uterus [Term] id: UBERON:0000006 name: islet of Langerhans namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004119 ! endoderm-derived structure relationship: part_of UBERON:0000016 ! endocrine pancreas [Term] id: UBERON:0000007 name: pituitary gland namespace: FANTOM is_a: UBERON:0003296 ! gland of diencephalon is_a: UBERON:0010133 ! neuroendocrine gland is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001894 ! diencephalon [Term] id: UBERON:0000010 name: peripheral nervous system namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0011216 ! organ system subdivision relationship: part_of UBERON:0001016 ! nervous system [Term] id: UBERON:0000011 name: parasympathetic nervous system namespace: FANTOM is_a: UBERON:0002410 ! autonomic nervous system relationship: part_of UBERON:0002410 ! autonomic nervous system [Term] id: UBERON:0000013 name: sympathetic nervous system namespace: FANTOM is_a: UBERON:0002410 ! autonomic nervous system relationship: part_of UBERON:0002410 ! autonomic nervous system [Term] id: UBERON:0000014 name: zone of skin namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0005162 ! multi cell component structure relationship: part_of UBERON:0002097 ! skin of body [Term] id: UBERON:0000016 name: endocrine pancreas namespace: FANTOM is_a: UBERON:0002075 ! viscus is_a: UBERON:0004119 ! endoderm-derived structure relationship: part_of UBERON:0001264 ! pancreas [Term] id: UBERON:0000019 name: camera-type eye namespace: FANTOM is_a: UBERON:0000047 ! simple eye is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0004088 ! ocular region [Term] id: UBERON:0000020 name: sense organ namespace: FANTOM is_a: UBERON:0000062 ! organ relationship: part_of UBERON:0001032 ! sensory system [Term] id: UBERON:0000025 name: tube namespace: FANTOM is_a: UBERON:0004111 ! anatomical conduit [Term] id: UBERON:0000026 name: appendage namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision [Term] id: UBERON:0000029 name: lymph node namespace: FANTOM is_a: UBERON:0000064 ! organ part relationship: part_of UBERON:0002465 ! lymphoid system [Term] id: UBERON:0000033 name: head namespace: FANTOM is_a: UBERON:0011676 ! subdivision of organism along main body axis relationship: part_of UBERON:0000153 ! anterior region of body relationship: part_of UBERON:0007811 ! craniocervical region [Term] id: UBERON:0000042 name: serous membrane namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0004457 ! cavity lining relationship: develops_from UBERON:0000926 ! mesoderm relationship: part_of UBERON:0000060 ! anatomical wall [Term] id: UBERON:0000043 name: tendon namespace: FANTOM is_a: UBERON:0007846 ! dense regular connective tissue relationship: part_of UBERON:0002204 ! musculoskeletal system [Term] id: UBERON:0000047 name: simple eye namespace: FANTOM is_a: UBERON:0000970 ! eye [Term] id: UBERON:0000055 name: vessel namespace: FANTOM is_a: UBERON:0004111 ! anatomical conduit [Term] id: UBERON:0000057 name: urethra namespace: FANTOM is_a: UBERON:0000062 ! organ is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0006554 ! urinary system structure relationship: part_of UBERON:0001556 ! lower urinary tract [Term] id: UBERON:0000058 name: duct namespace: FANTOM is_a: UBERON:0004111 ! anatomical conduit [Term] id: UBERON:0000059 name: large intestine namespace: FANTOM is_a: UBERON:0004921 ! subdivision of digestive tract is_a: UBERON:0013765 ! digestive system organ relationship: part_of UBERON:0000160 ! intestine relationship: part_of UBERON:0004907 ! lower digestive tract [Term] id: UBERON:0000060 name: anatomical wall namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure [Term] id: UBERON:0000061 name: anatomical structure namespace: FANTOM is_a: UBERON:0000465 ! material anatomical entity [Term] id: UBERON:0000062 name: organ namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure relationship: part_of UBERON:0000467 ! anatomical system [Term] id: UBERON:0000063 name: organ segment namespace: FANTOM is_a: UBERON:0000064 ! organ part [Term] id: UBERON:0000064 name: organ part namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure relationship: part_of UBERON:0000062 ! organ [Term] id: UBERON:0000065 name: respiratory tract namespace: FANTOM is_a: UBERON:0001005 ! respiratory airway is_a: UBERON:0004119 ! endoderm-derived structure relationship: part_of UBERON:0001004 ! respiratory system [Term] id: UBERON:0000072 name: segment of respiratory tract namespace: FANTOM is_a: UBERON:0000063 ! organ segment is_a: UBERON:0004119 ! endoderm-derived structure intersection_of: UBERON:0000063 ! organ segment intersection_of: part_of UBERON:0000065 ! respiratory tract relationship: part_of UBERON:0000065 ! respiratory tract [Term] id: UBERON:0000073 name: regional part of nervous system namespace: FANTOM is_a: UBERON:0000481 ! multi-tissue structure is_a: UBERON:0004121 ! ectoderm-derived structure intersection_of: UBERON:0000481 ! multi-tissue structure intersection_of: part_of UBERON:0001016 ! nervous system relationship: part_of UBERON:0001016 ! nervous system [Term] id: UBERON:0000074 name: renal glomerulus namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0006554 ! urinary system structure relationship: part_of UBERON:0001229 ! renal corpuscle [Term] id: UBERON:0000075 name: subdivision of skeletal system namespace: FANTOM is_a: UBERON:0011216 ! organ system subdivision relationship: part_of UBERON:0001434 ! skeletal system [Term] id: UBERON:0000077 name: mixed endoderm/mesoderm-derived structure namespace: FANTOM is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004120 ! mesoderm-derived structure relationship: develops_from UBERON:0000926 ! mesoderm [Term] id: UBERON:0000078 name: mixed ectoderm/mesoderm/endoderm-derived structure namespace: FANTOM is_a: UBERON:0000077 ! mixed endoderm/mesoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure relationship: develops_from UBERON:0000926 ! mesoderm [Term] id: UBERON:0000079 name: male reproductive system namespace: FANTOM is_a: UBERON:0000990 ! reproductive system is_a: UBERON:0014403 ! male anatomical structure intersection_of: UBERON:0000990 ! reproductive system intersection_of: part_of UBERON:0003101 ! male organism relationship: part_of UBERON:0003101 ! male organism [Term] id: UBERON:0000094 name: membrane organ namespace: FANTOM is_a: UBERON:0000062 ! organ [Term] id: UBERON:0000101 name: lobe of lung namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004119 ! endoderm-derived structure relationship: part_of UBERON:0002048 ! lung [Term] id: UBERON:0000115 name: lung epithelium namespace: FANTOM is_a: UBERON:0004815 ! lower respiratory tract epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0002048 ! lung relationship: develops_from UBERON:0001041 ! foregut relationship: part_of UBERON:0002048 ! lung [Term] id: UBERON:0000117 name: respiratory tube namespace: FANTOM is_a: UBERON:0000025 ! tube is_a: UBERON:0004119 ! endoderm-derived structure intersection_of: UBERON:0000025 ! tube intersection_of: part_of UBERON:0000065 ! respiratory tract relationship: part_of UBERON:0000065 ! respiratory tract [Term] id: UBERON:0000119 name: cell layer namespace: FANTOM is_a: UBERON:0000479 ! tissue [Term] id: UBERON:0000121 name: perineurium namespace: FANTOM is_a: UBERON:0002384 ! connective tissue [Term] id: UBERON:0000122 name: neuron projection bundle namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0005162 ! multi cell component structure relationship: part_of UBERON:0001016 ! nervous system [Term] id: UBERON:0000125 name: neural nucleus namespace: FANTOM is_a: UBERON:0000073 ! regional part of nervous system relationship: part_of UBERON:0001016 ! nervous system [Term] id: UBERON:0000153 name: anterior region of body namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision [Term] id: UBERON:0000154 name: posterior region of body namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision [Term] id: UBERON:0000158 name: membranous layer namespace: FANTOM is_a: UBERON:0004923 ! organ component layer [Term] id: UBERON:0000160 name: intestine namespace: FANTOM is_a: UBERON:0004921 ! subdivision of digestive tract relationship: part_of UBERON:0005409 ! gastrointestinal system [Term] id: UBERON:0000161 name: orifice namespace: FANTOM is_a: UBERON:0004111 ! anatomical conduit [Term] id: UBERON:0000165 name: mouth namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0004921 ! subdivision of digestive tract relationship: part_of UBERON:0000033 ! head [Term] id: UBERON:0000166 name: oral opening namespace: FANTOM is_a: UBERON:0000161 ! orifice is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0000165 ! mouth [Term] id: UBERON:0000170 name: pair of lungs namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0004119 ! endoderm-derived structure relationship: part_of UBERON:0001558 ! lower respiratory tract [Term] id: UBERON:0000171 name: respiration organ namespace: FANTOM is_a: UBERON:0000062 ! organ relationship: part_of UBERON:0001004 ! respiratory system [Term] id: UBERON:0000178 name: blood namespace: FANTOM is_a: UBERON:0000179 ! haemolymphatic fluid relationship: part_of UBERON:0002390 ! hematopoietic system relationship: part_of UBERON:0004535 ! cardiovascular system [Term] id: UBERON:0000179 name: haemolymphatic fluid namespace: FANTOM is_a: UBERON:0000463 ! portion of organism substance intersection_of: UBERON:0000463 ! portion of organism substance intersection_of: part_of UBERON:0002390 ! hematopoietic system relationship: part_of UBERON:0002390 ! hematopoietic system [Term] id: UBERON:0000200 name: gyrus namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001869 ! cerebral hemisphere [Term] id: UBERON:0000203 name: pallium namespace: FANTOM is_a: UBERON:0011300 ! gray matter of telencephalon relationship: part_of UBERON:0001893 ! telencephalon [Term] id: UBERON:0000204 name: ventral part of telencephalon namespace: FANTOM is_a: UBERON:0002791 ! regional part of telencephalon relationship: part_of UBERON:0001893 ! telencephalon [Term] id: UBERON:0000211 name: ligament namespace: FANTOM is_a: UBERON:0007846 ! dense regular connective tissue [Term] id: UBERON:0000305 name: amnion namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0005631 ! extraembryonic membrane [Term] id: UBERON:0000307 name: blastula namespace: FANTOM is_a: UBERON:0000922 ! embryo [Term] id: UBERON:0000310 name: breast namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision relationship: part_of UBERON:0001443 ! chest [Term] id: UBERON:0000323 name: late embryo namespace: FANTOM is_a: UBERON:0000922 ! embryo [Term] id: UBERON:0000331 name: ileal mucosa namespace: FANTOM is_a: UBERON:0001204 ! mucosa of small intestine intersection_of: UBERON:0000344 ! mucosa intersection_of: part_of UBERON:0002116 ! ileum relationship: part_of UBERON:0002116 ! ileum [Term] id: UBERON:0000333 name: intestinal gland namespace: FANTOM is_a: UBERON:0003408 ! gland of gut intersection_of: UBERON:0002530 ! gland intersection_of: part_of UBERON:0001242 ! intestinal mucosa relationship: part_of UBERON:0001242 ! intestinal mucosa [Term] id: UBERON:0000341 name: throat namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision relationship: part_of UBERON:0000974 ! neck [Term] id: UBERON:0000344 name: mucosa namespace: FANTOM is_a: UBERON:0004923 ! organ component layer [Term] id: UBERON:0000349 name: limbic system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001890 ! forebrain [Term] id: UBERON:0000353 name: parenchyma namespace: FANTOM is_a: UBERON:0000064 ! organ part [Term] id: UBERON:0000358 name: blastocyst namespace: FANTOM is_a: UBERON:0002050 ! embryonic structure relationship: part_of UBERON:0000307 ! blastula [Term] id: UBERON:0000365 name: urothelium namespace: FANTOM is_a: UBERON:0005910 ! transitional epithelium is_a: UBERON:0006554 ! urinary system structure intersection_of: UBERON:0005910 ! transitional epithelium intersection_of: part_of UBERON:0001008 ! excretory system relationship: part_of UBERON:0001008 ! excretory system [Term] id: UBERON:0000369 name: corpus striatum namespace: FANTOM is_a: UBERON:0002791 ! regional part of telencephalon relationship: part_of UBERON:0002420 ! basal ganglion [Term] id: UBERON:0000376 name: hindlimb stylopod namespace: FANTOM is_a: UBERON:0002472 ! stylopod is_a: UBERON:0008784 ! lower limb segment intersection_of: UBERON:0002472 ! stylopod intersection_of: part_of UBERON:0002103 ! hindlimb relationship: part_of UBERON:0000978 ! leg relationship: part_of UBERON:0002103 ! hindlimb [Term] id: UBERON:0000383 name: musculature of body namespace: FANTOM is_a: UBERON:0000467 ! anatomical system relationship: part_of UBERON:0002204 ! musculoskeletal system [Term] id: UBERON:0000411 name: visual cortex namespace: FANTOM is_a: UBERON:0002619 ! regional part of cerebral cortex relationship: part_of UBERON:0002021 ! occipital lobe [Term] id: UBERON:0000412 name: dermal papilla namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001992 ! papillary layer of dermis [Term] id: UBERON:0000454 name: cerebral subcortex namespace: FANTOM is_a: UBERON:0000064 ! organ part [Term] id: UBERON:0000459 name: uterine wall namespace: FANTOM is_a: UBERON:0000060 ! anatomical wall is_a: UBERON:0000064 ! organ part is_a: UBERON:0005156 ! reproductive structure is_a: UBERON:0014404 ! female anatomical structure intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0000995 ! uterus relationship: part_of UBERON:0000995 ! uterus [Term] id: UBERON:0000463 name: portion of organism substance namespace: FANTOM is_a: UBERON:0000465 ! material anatomical entity relationship: part_of UBERON:0000468 ! multi-cellular organism [Term] id: UBERON:0000464 name: anatomical space namespace: FANTOM is_a: UBERON:0000466 ! immaterial anatomical entity [Term] id: UBERON:0000465 name: material anatomical entity namespace: FANTOM is_a: UBERON:0001062 ! anatomical entity [Term] id: UBERON:0000466 name: immaterial anatomical entity namespace: FANTOM is_a: UBERON:0001062 ! anatomical entity [Term] id: UBERON:0000467 name: anatomical system namespace: FANTOM is_a: UBERON:0000480 ! anatomical group relationship: part_of UBERON:0000468 ! multi-cellular organism [Term] id: UBERON:0000468 name: multi-cellular organism namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure [Term] id: UBERON:0000473 name: testis namespace: FANTOM is_a: UBERON:0000991 ! gonad is_a: UBERON:0003135 ! male reproductive organ intersection_of: UBERON:0000991 ! gonad intersection_of: part_of UBERON:0000079 ! male reproductive system relationship: part_of UBERON:0000079 ! male reproductive system [Term] id: UBERON:0000474 name: female reproductive system namespace: FANTOM is_a: UBERON:0000990 ! reproductive system is_a: UBERON:0014404 ! female anatomical structure intersection_of: UBERON:0000990 ! reproductive system intersection_of: part_of UBERON:0003100 ! female organism relationship: part_of UBERON:0003100 ! female organism [Term] id: UBERON:0000475 name: organism subdivision namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure relationship: part_of UBERON:0000468 ! multi-cellular organism [Term] id: UBERON:0000476 name: acellular anatomical structure namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure [Term] id: UBERON:0000477 name: anatomical cluster namespace: FANTOM is_a: UBERON:0000480 ! anatomical group [Term] id: UBERON:0000478 name: extraembryonic structure namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure [Term] id: UBERON:0000479 name: tissue namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure relationship: part_of UBERON:0000468 ! multi-cellular organism [Term] id: UBERON:0000480 name: anatomical group namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure relationship: part_of UBERON:0000468 ! multi-cellular organism [Term] id: UBERON:0000481 name: multi-tissue structure namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure relationship: part_of UBERON:0000468 ! multi-cellular organism [Term] id: UBERON:0000483 name: epithelium namespace: FANTOM is_a: UBERON:0000119 ! cell layer union_of: UBERON:0000486 ! multilaminar epithelium union_of: UBERON:0000490 ! unilaminar epithelium [Term] id: UBERON:0000484 name: simple cuboidal epithelium namespace: FANTOM is_a: UBERON:0000490 ! unilaminar epithelium is_a: UBERON:0010077 ! cuboidal epithelium [Term] id: UBERON:0000485 name: simple columnar epithelium namespace: FANTOM is_a: UBERON:0000490 ! unilaminar epithelium is_a: UBERON:0012274 ! columnar epithelium [Term] id: UBERON:0000486 name: multilaminar epithelium namespace: FANTOM is_a: UBERON:0000483 ! epithelium [Term] id: UBERON:0000487 name: simple squamous epithelium namespace: FANTOM is_a: UBERON:0000490 ! unilaminar epithelium is_a: UBERON:0006914 ! squamous epithelium [Term] id: UBERON:0000488 name: atypical epithelium namespace: FANTOM is_a: UBERON:0000483 ! epithelium [Term] id: UBERON:0000489 name: cavitated compound organ namespace: FANTOM is_a: UBERON:0003103 ! compound organ [Term] id: UBERON:0000490 name: unilaminar epithelium namespace: FANTOM is_a: UBERON:0000483 ! epithelium [Term] id: UBERON:0000915 name: thoracic segment of trunk namespace: FANTOM is_a: UBERON:0009569 ! subdivision of trunk is_a: UBERON:0011676 ! subdivision of organism along main body axis [Term] id: UBERON:0000916 name: abdomen namespace: FANTOM is_a: UBERON:0009569 ! subdivision of trunk relationship: part_of UBERON:0002417 ! abdominal segment of trunk [Term] id: UBERON:0000920 name: egg chorion namespace: FANTOM is_a: UBERON:0000476 ! acellular anatomical structure is_a: UBERON:0000478 ! extraembryonic structure [Term] id: UBERON:0000922 name: embryo namespace: FANTOM is_a: UBERON:0000468 ! multi-cellular organism [Term] id: UBERON:0000923 name: germ layer namespace: FANTOM is_a: UBERON:0010316 ! germ layer / neural crest relationship: part_of UBERON:0000922 ! embryo [Term] id: UBERON:0000926 name: mesoderm namespace: FANTOM is_a: UBERON:0000923 ! germ layer [Term] id: UBERON:0000941 name: cranial nerve II namespace: FANTOM is_a: UBERON:0001785 ! cranial nerve is_a: UBERON:0002464 ! nerve trunk is_a: UBERON:0004904 ! nerve connecting eye with brain relationship: part_of UBERON:0002104 ! visual system [Term] id: UBERON:0000945 name: stomach namespace: FANTOM is_a: UBERON:0004921 ! subdivision of digestive tract is_a: UBERON:0010039 ! food storage organ relationship: part_of UBERON:0001041 ! foregut [Term] id: UBERON:0000946 name: cardial valve namespace: FANTOM is_a: UBERON:0003978 ! valve is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0010313 ! neural crest-derived structure relationship: part_of UBERON:0000948 ! heart [Term] id: UBERON:0000947 name: aorta namespace: FANTOM is_a: UBERON:0003509 ! arterial blood vessel is_a: UBERON:0013768 ! great vessel of heart relationship: part_of UBERON:0004571 ! systemic arterial system relationship: part_of UBERON:0010191 ! aortic system [Term] id: UBERON:0000948 name: heart namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0007100 ! circulatory organ is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0004535 ! cardiovascular system [Term] id: UBERON:0000949 name: endocrine system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system [Term] id: UBERON:0000955 name: brain namespace: FANTOM is_a: UBERON:0000062 ! organ is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001017 ! central nervous system [Term] id: UBERON:0000956 name: cerebral cortex namespace: FANTOM is_a: UBERON:0002791 ! regional part of telencephalon relationship: part_of UBERON:0000203 ! pallium relationship: part_of UBERON:0001869 ! cerebral hemisphere [Term] id: UBERON:0000964 name: cornea namespace: FANTOM is_a: UBERON:0003102 ! surface structure is_a: UBERON:0010313 ! neural crest-derived structure relationship: part_of UBERON:0001801 ! anterior segment of eyeball relationship: part_of UBERON:0010409 ! eye surface relationship: part_of UBERON:0012430 ! tunica fibrosa of eyeball [Term] id: UBERON:0000965 name: lens of camera-type eye namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0005389 ! transparent eye structure relationship: part_of UBERON:0001801 ! anterior segment of eyeball [Term] id: UBERON:0000966 name: retina namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0005388 ! photoreceptor array relationship: part_of UBERON:0001802 ! posterior segment of eyeball [Term] id: UBERON:0000970 name: eye namespace: FANTOM is_a: UBERON:0000020 ! sense organ relationship: part_of UBERON:0002104 ! visual system [Term] id: UBERON:0000974 name: neck namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision relationship: part_of UBERON:0000153 ! anterior region of body relationship: part_of UBERON:0007811 ! craniocervical region [Term] id: UBERON:0000978 name: leg namespace: FANTOM is_a: UBERON:0006058 ! multi-limb segment region relationship: part_of UBERON:0002103 ! hindlimb [Term] id: UBERON:0000981 name: femur namespace: FANTOM is_a: UBERON:0003608 ! hindlimb long bone is_a: UBERON:0003826 ! upper leg bone is_a: UBERON:0008202 ! bone of hip region relationship: part_of UBERON:0000376 ! hindlimb stylopod relationship: part_of UBERON:0001441 ! hindlimb skeleton [Term] id: UBERON:0000982 name: skeletal joint namespace: FANTOM is_a: UBERON:0004905 ! articulation union_of: UBERON:0002217 ! synovial joint union_of: UBERON:0011134 ! nonsynovial joint relationship: part_of UBERON:0004770 ! articular system [Term] id: UBERON:0000988 name: pons namespace: FANTOM is_a: UBERON:0002680 ! regional part of metencephalon relationship: part_of UBERON:0001895 ! metencephalon relationship: part_of UBERON:0002298 ! brainstem [Term] id: UBERON:0000989 name: penis namespace: FANTOM is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0008811 ! intromittent organ [Term] id: UBERON:0000990 name: reproductive system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system is_a: UBERON:0004120 ! mesoderm-derived structure relationship: develops_from UBERON:0000926 ! mesoderm [Term] id: UBERON:0000991 name: gonad namespace: FANTOM is_a: UBERON:0003133 ! reproductive organ relationship: part_of UBERON:0000990 ! reproductive system [Term] id: UBERON:0000992 name: female gonad namespace: FANTOM is_a: UBERON:0000991 ! gonad is_a: UBERON:0003134 ! female reproductive organ intersection_of: UBERON:0000991 ! gonad intersection_of: part_of UBERON:0000474 ! female reproductive system relationship: part_of UBERON:0000474 ! female reproductive system [Term] id: UBERON:0000993 name: oviduct namespace: FANTOM is_a: UBERON:0000025 ! tube is_a: UBERON:0005156 ! reproductive structure is_a: UBERON:0014404 ! female anatomical structure relationship: part_of UBERON:0000474 ! female reproductive system [Term] id: UBERON:0000995 name: uterus namespace: FANTOM is_a: UBERON:0013515 ! subdivision of uterine tube relationship: part_of UBERON:0004175 ! internal genitalia [Term] id: UBERON:0000996 name: vagina namespace: FANTOM is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0013515 ! subdivision of uterine tube relationship: part_of UBERON:0003975 ! internal female genitalia [Term] id: UBERON:0000997 name: mammalian vulva namespace: FANTOM is_a: UBERON:0000062 ! organ is_a: UBERON:0005156 ! reproductive structure is_a: UBERON:0014404 ! female anatomical structure relationship: part_of UBERON:0005056 ! external female genitalia [Term] id: UBERON:0000998 name: seminal vesicle namespace: FANTOM is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0006868 ! seminal fluid secreting gland relationship: part_of UBERON:0000473 ! testis [Term] id: UBERON:0001000 name: vas deferens namespace: FANTOM is_a: UBERON:0005904 ! duct of male reproductive system relationship: part_of UBERON:0005352 ! spermatic cord relationship: part_of UBERON:0006947 ! male genital duct [Term] id: UBERON:0001003 name: epidermis namespace: FANTOM is_a: UBERON:0007376 ! outer epithelial layer is_a: UBERON:0010371 ! ecto-epithelium relationship: part_of UBERON:0002097 ! skin of body relationship: part_of UBERON:0002199 ! integument [Term] id: UBERON:0001004 name: respiratory system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system [Term] id: UBERON:0001005 name: respiratory airway namespace: FANTOM is_a: UBERON:0003103 ! compound organ relationship: part_of UBERON:0001004 ! respiratory system [Term] id: UBERON:0001007 name: digestive system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system [Term] id: UBERON:0001008 name: excretory system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system [Term] id: UBERON:0001009 name: circulatory system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system [Term] id: UBERON:0001013 name: adipose tissue namespace: FANTOM is_a: UBERON:0002384 ! connective tissue [Term] id: UBERON:0001015 name: musculature namespace: FANTOM is_a: UBERON:0000480 ! anatomical group relationship: part_of UBERON:0000383 ! musculature of body [Term] id: UBERON:0001016 name: nervous system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system is_a: UBERON:0004121 ! ectoderm-derived structure [Term] id: UBERON:0001017 name: central nervous system namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0011216 ! organ system subdivision relationship: part_of UBERON:0001016 ! nervous system [Term] id: UBERON:0001018 name: axon tract namespace: FANTOM is_a: UBERON:0000122 ! neuron projection bundle is_a: UBERON:0011215 ! cell part cluster of neuraxis relationship: part_of UBERON:0001017 ! central nervous system [Term] id: UBERON:0001020 name: commissure namespace: FANTOM is_a: UBERON:0001018 ! axon tract [Term] id: UBERON:0001021 name: nerve namespace: FANTOM is_a: UBERON:0000122 ! neuron projection bundle relationship: part_of UBERON:0000010 ! peripheral nervous system [Term] id: UBERON:0001032 name: sensory system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system relationship: part_of UBERON:0004456 ! entire sense organ system [Term] id: UBERON:0001033 name: gustatory system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system [Term] id: UBERON:0001041 name: foregut namespace: FANTOM is_a: UBERON:0004921 ! subdivision of digestive tract [Term] id: UBERON:0001042 name: chordate pharynx namespace: FANTOM is_a: UBERON:0006562 ! pharynx relationship: part_of UBERON:0001004 ! respiratory system [Term] id: UBERON:0001043 name: esophagus namespace: FANTOM is_a: UBERON:0004921 ! subdivision of digestive tract is_a: UBERON:0005178 ! thoracic cavity organ is_a: UBERON:0013765 ! digestive system organ [Term] id: UBERON:0001044 name: salivary gland namespace: FANTOM is_a: UBERON:0003294 ! gland of foregut is_a: UBERON:0010047 ! oral gland relationship: part_of UBERON:0001041 ! foregut [Term] id: UBERON:0001052 name: rectum namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0004921 ! subdivision of digestive tract relationship: part_of UBERON:0000059 ! large intestine relationship: part_of UBERON:0006866 ! terminal part of digestive tract relationship: part_of UBERON:0012361 ! internal anal region [Term] id: UBERON:0001062 name: anatomical entity namespace: FANTOM [Term] id: UBERON:0001066 name: intervertebral disk namespace: FANTOM is_a: UBERON:0011135 ! intervertebral cartilage [Term] id: UBERON:0001097 name: axillary lymph node namespace: FANTOM is_a: UBERON:0003968 ! peripheral lymph node relationship: part_of UBERON:0001467 ! shoulder [Term] id: UBERON:0001103 name: diaphragm namespace: FANTOM is_a: UBERON:0002426 ! chest muscle is_a: UBERON:0003831 ! respiratory system muscle is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0014398 ! respiratory muscle relationship: part_of UBERON:0001004 ! respiratory system relationship: part_of UBERON:0001443 ! chest [Term] id: UBERON:0001130 name: vertebral column namespace: FANTOM is_a: UBERON:0000075 ! subdivision of skeletal system is_a: UBERON:0004120 ! mesoderm-derived structure relationship: part_of UBERON:0011138 ! post-cranial axial skeletal system [Term] id: UBERON:0001134 name: skeletal muscle tissue namespace: FANTOM is_a: UBERON:0002036 ! striated muscle tissue [Term] id: UBERON:0001135 name: smooth muscle tissue namespace: FANTOM is_a: UBERON:0002385 ! muscle tissue [Term] id: UBERON:0001136 name: mesothelium namespace: FANTOM is_a: UBERON:0000487 ! simple squamous epithelium is_a: UBERON:0012275 ! meso-epithelium intersection_of: UBERON:0000487 ! simple squamous epithelium intersection_of: develops_from UBERON:0000926 ! mesoderm intersection_of: part_of UBERON:0000042 ! serous membrane relationship: develops_from UBERON:0000926 ! mesoderm relationship: part_of UBERON:0000042 ! serous membrane [Term] id: UBERON:0001137 name: dorsum namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision [Term] id: UBERON:0001153 name: caecum namespace: FANTOM is_a: UBERON:0009854 ! digestive tract diverticulum relationship: part_of UBERON:0000059 ! large intestine relationship: part_of UBERON:0001155 ! colon [Term] id: UBERON:0001154 name: vermiform appendix namespace: FANTOM is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0013765 ! digestive system organ relationship: part_of UBERON:0001153 ! caecum relationship: part_of UBERON:0004907 ! lower digestive tract [Term] id: UBERON:0001155 name: colon namespace: FANTOM is_a: UBERON:0004921 ! subdivision of digestive tract relationship: part_of UBERON:0000059 ! large intestine [Term] id: UBERON:0001168 name: wall of small intestine namespace: FANTOM is_a: UBERON:0001262 ! wall of intestine intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0002108 ! small intestine relationship: part_of UBERON:0002108 ! small intestine [Term] id: UBERON:0001171 name: portal lobule namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004119 ! endoderm-derived structure relationship: part_of UBERON:0001280 ! liver parenchyma [Term] id: UBERON:0001172 name: hepatic acinus namespace: FANTOM is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0011858 ! acinus of exocrine gland relationship: part_of UBERON:0001171 ! portal lobule relationship: part_of UBERON:0004647 ! liver lobule [Term] id: UBERON:0001173 name: biliary tree namespace: FANTOM is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0013765 ! digestive system organ relationship: part_of UBERON:0002294 ! biliary system [Term] id: UBERON:0001174 name: common bile duct namespace: FANTOM is_a: UBERON:0003703 ! extrahepatic bile duct relationship: part_of UBERON:0001173 ! biliary tree [Term] id: UBERON:0001178 name: visceral peritoneum namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004120 ! mesoderm-derived structure relationship: part_of UBERON:0002358 ! peritoneum [Term] id: UBERON:0001204 name: mucosa of small intestine namespace: FANTOM is_a: UBERON:0001242 ! intestinal mucosa intersection_of: UBERON:0000344 ! mucosa intersection_of: part_of UBERON:0002108 ! small intestine relationship: part_of UBERON:0001168 ! wall of small intestine relationship: part_of UBERON:0001242 ! intestinal mucosa relationship: part_of UBERON:0002108 ! small intestine [Term] id: UBERON:0001213 name: intestinal villus namespace: FANTOM is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004923 ! organ component layer relationship: part_of UBERON:0001277 ! intestinal epithelium [Term] id: UBERON:0001225 name: cortex of kidney namespace: FANTOM is_a: UBERON:0001851 ! cortex is_a: UBERON:0006554 ! urinary system structure intersection_of: UBERON:0001851 ! cortex intersection_of: part_of UBERON:0002113 ! kidney relationship: part_of UBERON:0002113 ! kidney relationship: part_of UBERON:0008987 ! renal parenchyma [Term] id: UBERON:0001229 name: renal corpuscle namespace: FANTOM is_a: UBERON:0000481 ! multi-tissue structure is_a: UBERON:0006554 ! urinary system structure relationship: part_of UBERON:0001225 ! cortex of kidney relationship: part_of UBERON:0001285 ! nephron relationship: part_of UBERON:0007684 ! uriniferous tubule [Term] id: UBERON:0001231 name: nephron tubule namespace: FANTOM is_a: UBERON:0004211 ! nephron epithelium is_a: UBERON:0009773 ! renal tubule intersection_of: UBERON:0003914 ! epithelial tube intersection_of: part_of UBERON:0001285 ! nephron relationship: part_of UBERON:0001285 ! nephron [Term] id: UBERON:0001235 name: adrenal cortex namespace: FANTOM is_a: UBERON:0001851 ! cortex is_a: UBERON:0004120 ! mesoderm-derived structure intersection_of: UBERON:0001851 ! cortex intersection_of: part_of UBERON:0002369 ! adrenal gland relationship: develops_from UBERON:0000926 ! mesoderm relationship: part_of UBERON:0002369 ! adrenal gland [Term] id: UBERON:0001242 name: intestinal mucosa namespace: FANTOM is_a: UBERON:0004786 ! gastrointestinal system mucosa intersection_of: UBERON:0000344 ! mucosa intersection_of: part_of UBERON:0000160 ! intestine relationship: part_of UBERON:0000160 ! intestine relationship: part_of UBERON:0001262 ! wall of intestine [Term] id: UBERON:0001255 name: urinary bladder namespace: FANTOM is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0000489 ! cavitated compound organ is_a: UBERON:0002075 ! viscus is_a: UBERON:0006554 ! urinary system structure relationship: part_of UBERON:0001556 ! lower urinary tract [Term] id: UBERON:0001256 name: wall of urinary bladder namespace: FANTOM is_a: UBERON:0000060 ! anatomical wall is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0006554 ! urinary system structure intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0001255 ! urinary bladder relationship: part_of UBERON:0001255 ! urinary bladder [Term] id: UBERON:0001259 name: mucosa of urinary bladder namespace: FANTOM is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0000344 ! mucosa is_a: UBERON:0006554 ! urinary system structure intersection_of: UBERON:0000344 ! mucosa intersection_of: part_of UBERON:0001255 ! urinary bladder relationship: part_of UBERON:0001255 ! urinary bladder relationship: part_of UBERON:0001256 ! wall of urinary bladder [Term] id: UBERON:0001262 name: wall of intestine namespace: FANTOM is_a: UBERON:0000060 ! anatomical wall is_a: UBERON:0004119 ! endoderm-derived structure intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0000160 ! intestine relationship: part_of UBERON:0000160 ! intestine [Term] id: UBERON:0001264 name: pancreas namespace: FANTOM is_a: UBERON:0002075 ! viscus relationship: part_of UBERON:0000949 ! endocrine system [Term] id: UBERON:0001277 name: intestinal epithelium namespace: FANTOM is_a: UBERON:0000485 ! simple columnar epithelium is_a: UBERON:0003350 ! epithelium of mucosa is_a: UBERON:0003929 ! gut epithelium is_a: UBERON:0004808 ! gastrointestinal system epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0000160 ! intestine relationship: part_of UBERON:0000160 ! intestine relationship: part_of UBERON:0001242 ! intestinal mucosa [Term] id: UBERON:0001280 name: liver parenchyma namespace: FANTOM is_a: UBERON:0000353 ! parenchyma is_a: UBERON:0004119 ! endoderm-derived structure intersection_of: UBERON:0000353 ! parenchyma intersection_of: part_of UBERON:0002107 ! liver relationship: part_of UBERON:0002107 ! liver [Term] id: UBERON:0001281 name: hepatic sinusoid namespace: FANTOM is_a: UBERON:0000077 ! mixed endoderm/mesoderm-derived structure is_a: UBERON:0003497 ! abdomen blood vessel is_a: UBERON:0003909 ! sinusoid is_a: UBERON:0005911 ! endo-epithelium intersection_of: UBERON:0003909 ! sinusoid intersection_of: part_of UBERON:0002107 ! liver relationship: part_of UBERON:0002107 ! liver relationship: part_of UBERON:0004647 ! liver lobule relationship: part_of UBERON:0006877 ! vasculature of liver [Term] id: UBERON:0001282 name: intralobular bile duct namespace: FANTOM is_a: UBERON:0003704 ! intrahepatic bile duct relationship: part_of UBERON:0001172 ! hepatic acinus relationship: part_of UBERON:0004647 ! liver lobule [Term] id: UBERON:0001285 name: nephron namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0006554 ! urinary system structure relationship: part_of UBERON:0007684 ! uriniferous tubule [Term] id: UBERON:0001295 name: endometrium namespace: FANTOM is_a: UBERON:0004923 ! organ component layer is_a: UBERON:0005156 ! reproductive structure is_a: UBERON:0014404 ! female anatomical structure relationship: part_of UBERON:0000459 ! uterine wall [Term] id: UBERON:0001301 name: epididymis namespace: FANTOM is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0005904 ! duct of male reproductive system relationship: part_of UBERON:0006947 ! male genital duct [Term] id: UBERON:0001310 name: umbilical artery namespace: FANTOM is_a: UBERON:0001637 ! artery is_a: UBERON:0010260 ! umbilical blood vessel [Term] id: UBERON:0001343 name: seminiferous tubule of testis namespace: FANTOM is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0005904 ! duct of male reproductive system relationship: part_of UBERON:0000473 ! testis [Term] id: UBERON:0001353 name: anal region namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure [Term] id: UBERON:0001359 name: cerebrospinal fluid namespace: FANTOM is_a: UBERON:0007779 ! transudate [Term] id: UBERON:0001374 name: biceps femoris namespace: FANTOM is_a: UBERON:0004252 ! hindlimb stylopod muscle relationship: part_of UBERON:0000376 ! hindlimb stylopod [Term] id: UBERON:0001383 name: muscle of leg namespace: FANTOM is_a: UBERON:0003663 ! hindlimb muscle intersection_of: UBERON:0001630 ! muscle organ intersection_of: part_of UBERON:0000978 ! leg relationship: part_of UBERON:0000978 ! leg [Term] id: UBERON:0001389 name: soleus muscle namespace: FANTOM is_a: UBERON:0004256 ! hindlimb zeugopod muscle relationship: part_of UBERON:0001665 ! triceps surae [Term] id: UBERON:0001419 name: skin of limb namespace: FANTOM is_a: UBERON:0000014 ! zone of skin intersection_of: UBERON:0000014 ! zone of skin intersection_of: part_of UBERON:0002101 ! limb relationship: part_of UBERON:0002101 ! limb [Term] id: UBERON:0001434 name: skeletal system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system relationship: part_of UBERON:0002204 ! musculoskeletal system [Term] id: UBERON:0001441 name: hindlimb skeleton namespace: FANTOM is_a: UBERON:0004381 ! skeleton of limb is_a: UBERON:0007273 ! pelvic appendage skeleton relationship: part_of UBERON:0002103 ! hindlimb relationship: part_of UBERON:0012476 ! skeleton of pelvic complex [Term] id: UBERON:0001443 name: chest namespace: FANTOM is_a: UBERON:0009569 ! subdivision of trunk relationship: part_of UBERON:0000915 ! thoracic segment of trunk [Term] id: UBERON:0001444 name: subdivision of head namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision relationship: part_of UBERON:0000033 ! head [Term] id: UBERON:0001456 name: face namespace: FANTOM is_a: UBERON:0001444 ! subdivision of head [Term] id: UBERON:0001465 name: knee namespace: FANTOM is_a: UBERON:0008784 ! lower limb segment relationship: part_of UBERON:0000978 ! leg [Term] id: UBERON:0001467 name: shoulder namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision relationship: part_of UBERON:0010708 ! pectoral complex [Term] id: UBERON:0001468 name: intervertebral joint namespace: FANTOM is_a: UBERON:0002216 ! symphysis is_a: UBERON:0004120 ! mesoderm-derived structure relationship: part_of UBERON:0001130 ! vertebral column [Term] id: UBERON:0001473 name: lymphatic vessel namespace: FANTOM is_a: UBERON:0000055 ! vessel relationship: part_of UBERON:0004536 ! lymph vasculature relationship: part_of UBERON:0006558 ! lymphatic part of lymphoid system [Term] id: UBERON:0001474 name: bone element namespace: FANTOM is_a: UBERON:0004765 ! skeletal element relationship: part_of UBERON:0001434 ! skeletal system [Term] id: UBERON:0001485 name: knee joint namespace: FANTOM is_a: UBERON:0003840 ! hindlimb joint is_a: UBERON:0011139 ! synovial limb joint relationship: part_of UBERON:0001465 ! knee [Term] id: UBERON:0001515 name: thoracic aorta namespace: FANTOM is_a: UBERON:0005800 ! segment of aorta intersection_of: UBERON:0005800 ! segment of aorta intersection_of: part_of UBERON:0000915 ! thoracic segment of trunk relationship: part_of UBERON:0000915 ! thoracic segment of trunk [Term] id: UBERON:0001519 name: skin of manus namespace: FANTOM is_a: UBERON:0003531 ! forelimb skin intersection_of: UBERON:0000014 ! zone of skin intersection_of: part_of UBERON:0002398 ! manus relationship: part_of UBERON:0002398 ! manus [Term] id: UBERON:0001529 name: brachiocephalic artery namespace: FANTOM is_a: UBERON:0004573 ! systemic artery relationship: part_of UBERON:0007204 ! brachiocephalic vasculature [Term] id: UBERON:0001533 name: subclavian artery namespace: FANTOM is_a: UBERON:0004573 ! systemic artery [Term] id: UBERON:0001555 name: digestive tract namespace: FANTOM is_a: UBERON:0000481 ! multi-tissue structure is_a: UBERON:0004119 ! endoderm-derived structure relationship: part_of UBERON:0001007 ! digestive system [Term] id: UBERON:0001556 name: lower urinary tract namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0006554 ! urinary system structure relationship: part_of UBERON:0001008 ! excretory system [Term] id: UBERON:0001557 name: upper respiratory tract namespace: FANTOM is_a: UBERON:0000072 ! segment of respiratory tract [Term] id: UBERON:0001558 name: lower respiratory tract namespace: FANTOM is_a: UBERON:0000072 ! segment of respiratory tract [Term] id: UBERON:0001560 name: neck of organ namespace: FANTOM is_a: UBERON:0000064 ! organ part [Term] id: UBERON:0001567 name: cheek namespace: FANTOM is_a: UBERON:0001444 ! subdivision of head relationship: part_of UBERON:0001456 ! face relationship: part_of UBERON:0004089 ! midface [Term] id: UBERON:0001601 name: extra-ocular muscle namespace: FANTOM is_a: UBERON:0004277 ! eye muscle is_a: UBERON:0010313 ! neural crest-derived structure relationship: part_of UBERON:0003269 ! skeletal muscle of eye [Term] id: UBERON:0001602 name: medial rectus extraocular muscle namespace: FANTOM is_a: UBERON:0006533 ! rectus extraocular muscle relationship: part_of UBERON:0002376 ! muscle of head [Term] id: UBERON:0001603 name: lateral rectus extra-ocular muscle namespace: FANTOM is_a: UBERON:0006533 ! rectus extraocular muscle [Term] id: UBERON:0001621 name: coronary artery namespace: FANTOM is_a: UBERON:0003498 ! heart blood vessel is_a: UBERON:0004573 ! systemic artery relationship: part_of UBERON:0000948 ! heart [Term] id: UBERON:0001630 name: muscle organ namespace: FANTOM is_a: UBERON:0000062 ! organ is_a: UBERON:0005090 ! muscle structure relationship: part_of UBERON:0001015 ! musculature [Term] id: UBERON:0001637 name: artery namespace: FANTOM is_a: UBERON:0003509 ! arterial blood vessel relationship: part_of UBERON:0004572 ! arterial system [Term] id: UBERON:0001638 name: vein namespace: FANTOM is_a: UBERON:0003920 ! venous blood vessel [Term] id: UBERON:0001665 name: triceps surae namespace: FANTOM is_a: UBERON:0004256 ! hindlimb zeugopod muscle relationship: part_of UBERON:0003823 ! hindlimb zeugopod [Term] id: UBERON:0001678 name: temporal bone namespace: FANTOM is_a: UBERON:0003462 ! facial bone is_a: UBERON:0008193 ! pneumatized bone [Term] id: UBERON:0001690 name: ear namespace: FANTOM is_a: UBERON:0000020 ! sense organ is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0000033 ! head relationship: part_of UBERON:0002105 ! vestibulo-auditory system [Term] id: UBERON:0001694 name: petrous part of temporal bone namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0005913 ! zone of bone organ is_a: UBERON:0010313 ! neural crest-derived structure relationship: part_of UBERON:0001678 ! temporal bone relationship: part_of UBERON:0002517 ! basicranium [Term] id: UBERON:0001703 name: neurocranium namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0011158 ! primary subdivision of skull relationship: part_of UBERON:0003128 ! cranium [Term] id: UBERON:0001705 name: nail namespace: FANTOM is_a: UBERON:0009564 ! distal limb integumentary appendage relationship: part_of UBERON:0001003 ! epidermis relationship: part_of UBERON:0002097 ! skin of body [Term] id: UBERON:0001708 name: jaw skeleton namespace: FANTOM is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest is_a: UBERON:0010912 ! subdivision of skeleton relationship: part_of UBERON:0011595 ! jaw region [Term] id: UBERON:0001709 name: upper jaw region namespace: FANTOM is_a: UBERON:0011595 ! jaw region relationship: part_of UBERON:0004089 ! midface [Term] id: UBERON:0001723 name: tongue namespace: FANTOM is_a: UBERON:0000020 ! sense organ is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest is_a: UBERON:0013765 ! digestive system organ relationship: part_of UBERON:0000165 ! mouth relationship: part_of UBERON:0001033 ! gustatory system [Term] id: UBERON:0001726 name: papilla of tongue namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001723 ! tongue relationship: part_of UBERON:0009471 ! dorsum of tongue [Term] id: UBERON:0001735 name: tonsillar ring namespace: FANTOM is_a: UBERON:0001962 ! gut-associated lymphoid tissue relationship: part_of UBERON:0001042 ! chordate pharynx [Term] id: UBERON:0001736 name: submandibular gland namespace: FANTOM is_a: UBERON:0001829 ! major salivary gland is_a: UBERON:0010314 ! structure with developmental contribution from neural crest [Term] id: UBERON:0001737 name: larynx namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0004119 ! endoderm-derived structure relationship: part_of UBERON:0001557 ! upper respiratory tract [Term] id: UBERON:0001744 name: lymphoid tissue namespace: FANTOM is_a: UBERON:0000479 ! tissue relationship: part_of UBERON:0002193 ! hemolymphoid system relationship: part_of UBERON:0002465 ! lymphoid system [Term] id: UBERON:0001758 name: periodontium namespace: FANTOM is_a: UBERON:0000479 ! tissue is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0003672 ! dentition [Term] id: UBERON:0001764 name: maxillary sinus namespace: FANTOM is_a: UBERON:0001825 ! paranasal sinus [Term] id: UBERON:0001768 name: uvea namespace: FANTOM is_a: UBERON:0002203 ! vasculature of eye relationship: part_of UBERON:0001801 ! anterior segment of eyeball [Term] id: UBERON:0001769 name: iris namespace: FANTOM is_a: UBERON:0000481 ! multi-tissue structure is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0011892 ! anterior uvea [Term] id: UBERON:0001774 name: muscle of trunk namespace: FANTOM is_a: UBERON:0001630 ! muscle organ is_a: UBERON:0005177 ! trunk organ intersection_of: UBERON:0001630 ! muscle organ intersection_of: part_of UBERON:0002100 ! trunk relationship: part_of UBERON:0002100 ! trunk [Term] id: UBERON:0001775 name: ciliary body namespace: FANTOM is_a: UBERON:0000481 ! multi-tissue structure is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0011892 ! anterior uvea [Term] id: UBERON:0001777 name: substantia propria of cornea namespace: FANTOM is_a: UBERON:0003566 ! head connective tissue is_a: UBERON:0003891 ! stroma is_a: UBERON:0010313 ! neural crest-derived structure intersection_of: UBERON:0003891 ! stroma intersection_of: part_of UBERON:0000964 ! cornea relationship: part_of UBERON:0000964 ! cornea [Term] id: UBERON:0001778 name: ciliary epithelium namespace: FANTOM is_a: UBERON:0000488 ! atypical epithelium is_a: UBERON:0007625 ! pigment epithelium of eye is_a: UBERON:0010371 ! ecto-epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001775 ! ciliary body relationship: part_of UBERON:0001775 ! ciliary body [Term] id: UBERON:0001781 name: layer of retina namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0004923 ! organ component layer relationship: part_of UBERON:0000966 ! retina [Term] id: UBERON:0001782 name: pigmented layer of retina namespace: FANTOM is_a: UBERON:0001781 ! layer of retina is_a: UBERON:0007625 ! pigment epithelium of eye is_a: UBERON:0010371 ! ecto-epithelium [Term] id: UBERON:0001785 name: cranial nerve namespace: FANTOM is_a: UBERON:0001021 ! nerve is_a: UBERON:0010314 ! structure with developmental contribution from neural crest [Term] id: UBERON:0001797 name: vitreous humor namespace: FANTOM is_a: UBERON:0006312 ! ocular refractive media relationship: part_of UBERON:0001798 ! vitreous body [Term] id: UBERON:0001798 name: vitreous body namespace: FANTOM is_a: UBERON:0003566 ! head connective tissue is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001799 ! vitreous chamber of eyeball [Term] id: UBERON:0001799 name: vitreous chamber of eyeball namespace: FANTOM is_a: UBERON:0006311 ! chamber of eyeball relationship: part_of UBERON:0001802 ! posterior segment of eyeball [Term] id: UBERON:0001801 name: anterior segment of eyeball namespace: FANTOM is_a: UBERON:0000063 ! organ segment is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0010230 ! eyeball of camera-type eye [Term] id: UBERON:0001802 name: posterior segment of eyeball namespace: FANTOM is_a: UBERON:0000063 ! organ segment is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0010230 ! eyeball of camera-type eye [Term] id: UBERON:0001803 name: epithelium of lens namespace: FANTOM is_a: UBERON:0000484 ! simple cuboidal epithelium is_a: UBERON:0007625 ! pigment epithelium of eye is_a: UBERON:0010371 ! ecto-epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0000965 ! lens of camera-type eye relationship: part_of UBERON:0000965 ! lens of camera-type eye [Term] id: UBERON:0001811 name: conjunctiva namespace: FANTOM is_a: UBERON:0000060 ! anatomical wall is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0005908 ! conjunctival sac relationship: part_of UBERON:0010409 ! eye surface [Term] id: UBERON:0001820 name: sweat gland namespace: FANTOM is_a: UBERON:0002365 ! exocrine gland is_a: UBERON:0007771 ! epidermis gland relationship: part_of UBERON:0001003 ! epidermis [Term] id: UBERON:0001821 name: sebaceous gland namespace: FANTOM is_a: UBERON:0002365 ! exocrine gland is_a: UBERON:0007771 ! epidermis gland is_a: UBERON:0012344 ! holocrine gland relationship: part_of UBERON:0001003 ! epidermis relationship: part_of UBERON:0002330 ! exocrine system [Term] id: UBERON:0001825 name: paranasal sinus namespace: FANTOM is_a: UBERON:0002553 ! anatomical cavity relationship: part_of UBERON:0000033 ! head relationship: part_of UBERON:0001004 ! respiratory system [Term] id: UBERON:0001828 name: gingiva namespace: FANTOM is_a: UBERON:0003729 ! mouth mucosa relationship: part_of UBERON:0003729 ! mouth mucosa relationship: part_of UBERON:0011595 ! jaw region [Term] id: UBERON:0001829 name: major salivary gland namespace: FANTOM is_a: UBERON:0010047 ! oral gland relationship: part_of UBERON:0000165 ! mouth [Term] id: UBERON:0001831 name: parotid gland namespace: FANTOM is_a: UBERON:0001829 ! major salivary gland is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001567 ! cheek [Term] id: UBERON:0001839 name: bony labyrinth namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0010313 ! neural crest-derived structure relationship: part_of UBERON:0001694 ! petrous part of temporal bone relationship: part_of UBERON:0001846 ! internal ear relationship: part_of UBERON:0004681 ! vestibular system [Term] id: UBERON:0001844 name: cochlea namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0010313 ! neural crest-derived structure relationship: part_of UBERON:0001839 ! bony labyrinth [Term] id: UBERON:0001846 name: internal ear namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001690 ! ear [Term] id: UBERON:0001849 name: membranous labyrinth namespace: FANTOM is_a: UBERON:0000062 ! organ is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0010313 ! neural crest-derived structure relationship: part_of UBERON:0001846 ! internal ear [Term] id: UBERON:0001851 name: cortex namespace: FANTOM is_a: UBERON:0000064 ! organ part [Term] id: UBERON:0001855 name: cochlear duct of membranous labyrinth namespace: FANTOM is_a: UBERON:0000058 ! duct is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0010313 ! neural crest-derived structure relationship: part_of UBERON:0002499 ! cochlear labyrinth [Term] id: UBERON:0001869 name: cerebral hemisphere namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001893 ! telencephalon [Term] id: UBERON:0001870 name: frontal cortex namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001950 ! neocortex [Term] id: UBERON:0001871 name: temporal lobe namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001950 ! neocortex [Term] id: UBERON:0001872 name: parietal lobe namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001950 ! neocortex [Term] id: UBERON:0001873 name: caudate nucleus namespace: FANTOM is_a: UBERON:0009663 ! telencephalic nucleus relationship: part_of UBERON:0001869 ! cerebral hemisphere relationship: part_of UBERON:0002435 ! striatum relationship: part_of UBERON:0005383 ! caudate-putamen [Term] id: UBERON:0001874 name: putamen namespace: FANTOM is_a: UBERON:0009663 ! telencephalic nucleus relationship: part_of UBERON:0001869 ! cerebral hemisphere relationship: part_of UBERON:0002435 ! striatum relationship: part_of UBERON:0005383 ! caudate-putamen [Term] id: UBERON:0001875 name: globus pallidus namespace: FANTOM is_a: UBERON:0009663 ! telencephalic nucleus relationship: part_of UBERON:0001869 ! cerebral hemisphere relationship: part_of UBERON:0002420 ! basal ganglion relationship: part_of UBERON:0006514 ! pallidum [Term] id: UBERON:0001876 name: amygdala namespace: FANTOM is_a: UBERON:0002420 ! basal ganglion is_a: UBERON:0005401 ! cerebral grey matter relationship: part_of UBERON:0000349 ! limbic system relationship: part_of UBERON:0001869 ! cerebral hemisphere relationship: part_of UBERON:0001871 ! temporal lobe [Term] id: UBERON:0001882 name: nucleus accumbens namespace: FANTOM is_a: UBERON:0009663 ! telencephalic nucleus relationship: part_of UBERON:0000349 ! limbic system relationship: part_of UBERON:0001869 ! cerebral hemisphere relationship: part_of UBERON:0005403 ! ventral striatum [Term] id: UBERON:0001886 name: choroid plexus namespace: FANTOM is_a: UBERON:0005284 ! brain vasculature is_a: UBERON:0005629 ! vascular plexus relationship: part_of UBERON:0004086 ! brain ventricle relationship: part_of UBERON:0005283 ! tela choroidea [Term] id: UBERON:0001890 name: forebrain namespace: FANTOM is_a: UBERON:0002616 ! regional part of brain relationship: part_of UBERON:0000955 ! brain [Term] id: UBERON:0001891 name: midbrain namespace: FANTOM is_a: UBERON:0002616 ! regional part of brain is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0000955 ! brain [Term] id: UBERON:0001893 name: telencephalon namespace: FANTOM is_a: UBERON:0002780 ! regional part of forebrain is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001890 ! forebrain [Term] id: UBERON:0001894 name: diencephalon namespace: FANTOM is_a: UBERON:0002780 ! regional part of forebrain is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001890 ! forebrain [Term] id: UBERON:0001895 name: metencephalon namespace: FANTOM is_a: UBERON:0004733 ! segmental subdivision of hindbrain is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0002028 ! hindbrain [Term] id: UBERON:0001896 name: medulla oblongata namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0002028 ! hindbrain relationship: part_of UBERON:0002298 ! brainstem relationship: part_of UBERON:0005290 ! myelencephalon [Term] id: UBERON:0001897 name: thalamus namespace: FANTOM is_a: UBERON:0002784 ! regional part of diencephalon relationship: part_of UBERON:0010225 ! thalamic complex [Term] id: UBERON:0001899 name: epithalamus namespace: FANTOM is_a: UBERON:0002784 ! regional part of diencephalon relationship: part_of UBERON:0001894 ! diencephalon [Term] id: UBERON:0001902 name: epithelium of small intestine namespace: FANTOM is_a: UBERON:0001277 ! intestinal epithelium is_a: UBERON:0006799 ! glandular epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0002108 ! small intestine relationship: part_of UBERON:0001204 ! mucosa of small intestine relationship: part_of UBERON:0002108 ! small intestine [Term] id: UBERON:0001905 name: pineal body namespace: FANTOM is_a: UBERON:0002757 ! regional part of epithalamus is_a: UBERON:0003296 ! gland of diencephalon is_a: UBERON:0010134 ! secretory circumventricular organ relationship: part_of UBERON:0001899 ! epithalamus [Term] id: UBERON:0001911 name: mammary gland namespace: FANTOM is_a: UBERON:0002365 ! exocrine gland is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0005398 ! female reproductive gland relationship: part_of UBERON:0000474 ! female reproductive system relationship: part_of UBERON:0003100 ! female organism [Term] id: UBERON:0001915 name: endothelium of capillary namespace: FANTOM is_a: UBERON:0004638 ! blood vessel endothelium intersection_of: UBERON:0001986 ! endothelium intersection_of: part_of UBERON:0001982 ! capillary relationship: part_of UBERON:0001982 ! capillary [Term] id: UBERON:0001917 name: endothelium of artery namespace: FANTOM is_a: UBERON:0003915 ! endothelial tube is_a: UBERON:0004638 ! blood vessel endothelium is_a: UBERON:0004700 ! arterial system endothelium intersection_of: UBERON:0001986 ! endothelium intersection_of: part_of UBERON:0001637 ! artery relationship: part_of UBERON:0001637 ! artery [Term] id: UBERON:0001948 name: regional part of spinal cord namespace: FANTOM is_a: UBERON:0000073 ! regional part of nervous system intersection_of: UBERON:0000481 ! multi-tissue structure intersection_of: part_of UBERON:0002240 ! spinal cord relationship: part_of UBERON:0002240 ! spinal cord [Term] id: UBERON:0001949 name: gingival epithelium namespace: FANTOM is_a: UBERON:0002424 ! oral epithelium is_a: UBERON:0006915 ! stratified squamous epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001828 ! gingiva relationship: part_of UBERON:0001828 ! gingiva [Term] id: UBERON:0001950 name: neocortex namespace: FANTOM is_a: UBERON:0002619 ! regional part of cerebral cortex relationship: part_of UBERON:0000956 ! cerebral cortex [Term] id: UBERON:0001954 name: Ammon's horn namespace: FANTOM is_a: UBERON:0002619 ! regional part of cerebral cortex relationship: part_of UBERON:0000349 ! limbic system relationship: part_of UBERON:0002421 ! hippocampal formation relationship: part_of UBERON:0002600 ! limbic lobe [Term] id: UBERON:0001961 name: mucosa-associated lymphoid tissue namespace: FANTOM is_a: UBERON:0012069 ! epithelium-associated lymphoid tissue [Term] id: UBERON:0001962 name: gut-associated lymphoid tissue namespace: FANTOM is_a: UBERON:0001961 ! mucosa-associated lymphoid tissue is_a: UBERON:0004119 ! endoderm-derived structure intersection_of: UBERON:0001961 ! mucosa-associated lymphoid tissue intersection_of: part_of UBERON:0001555 ! digestive tract relationship: part_of UBERON:0001555 ! digestive tract [Term] id: UBERON:0001981 name: blood vessel namespace: FANTOM is_a: UBERON:0000055 ! vessel is_a: UBERON:0004120 ! mesoderm-derived structure relationship: part_of UBERON:0004537 ! blood vasculature [Term] id: UBERON:0001982 name: capillary namespace: FANTOM is_a: UBERON:0001981 ! blood vessel is_a: UBERON:0010523 ! microcirculatory vessel [Term] id: UBERON:0001983 name: crypt of Lieberkuhn namespace: FANTOM is_a: UBERON:0000333 ! intestinal gland relationship: part_of UBERON:0001242 ! intestinal mucosa [Term] id: UBERON:0001986 name: endothelium namespace: FANTOM is_a: UBERON:0000487 ! simple squamous epithelium is_a: UBERON:0012275 ! meso-epithelium relationship: develops_from UBERON:0000926 ! mesoderm [Term] id: UBERON:0001987 name: placenta namespace: FANTOM is_a: UBERON:0000062 ! organ is_a: UBERON:0000077 ! mixed endoderm/mesoderm-derived structure is_a: UBERON:0000478 ! extraembryonic structure is_a: UBERON:0005156 ! reproductive structure is_a: UBERON:0014404 ! female anatomical structure relationship: develops_from UBERON:0000995 ! uterus relationship: develops_from UBERON:0003124 ! chorion relationship: part_of UBERON:0000474 ! female reproductive system [Term] id: UBERON:0001992 name: papillary layer of dermis namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0004923 ! organ component layer relationship: part_of UBERON:0002067 ! dermis [Term] id: UBERON:0001995 name: fibrocartilage namespace: FANTOM is_a: UBERON:0002418 ! cartilage tissue [Term] id: UBERON:0002005 name: enteric nervous system namespace: FANTOM is_a: UBERON:0002410 ! autonomic nervous system is_a: UBERON:0010313 ! neural crest-derived structure relationship: part_of UBERON:0002410 ! autonomic nervous system [Term] id: UBERON:0002012 name: pulmonary artery namespace: FANTOM is_a: UBERON:0000077 ! mixed endoderm/mesoderm-derived structure is_a: UBERON:0001637 ! artery is_a: UBERON:0010314 ! structure with developmental contribution from neural crest is_a: UBERON:0013768 ! great vessel of heart intersection_of: UBERON:0001637 ! artery intersection_of: part_of UBERON:0008886 ! pulmonary vascular system relationship: part_of UBERON:0008886 ! pulmonary vascular system [Term] id: UBERON:0002018 name: synovial membrane of synovial joint namespace: FANTOM is_a: UBERON:0006915 ! stratified squamous epithelium is_a: UBERON:0007616 ! layer of synovial tissue is_a: UBERON:0012275 ! meso-epithelium relationship: part_of UBERON:0002217 ! synovial joint [Term] id: UBERON:0002020 name: gray matter of neuraxis namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001017 ! central nervous system [Term] id: UBERON:0002021 name: occipital lobe namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001950 ! neocortex [Term] id: UBERON:0002022 name: insula namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0000956 ! cerebral cortex relationship: part_of UBERON:0001869 ! cerebral hemisphere relationship: part_of UBERON:0001950 ! neocortex [Term] id: UBERON:0002028 name: hindbrain namespace: FANTOM is_a: UBERON:0004732 ! segmental subdivision of nervous system is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0000955 ! brain [Term] id: UBERON:0002031 name: epithelium of bronchus namespace: FANTOM is_a: UBERON:0000485 ! simple columnar epithelium is_a: UBERON:0004815 ! lower respiratory tract epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0002185 ! bronchus relationship: part_of UBERON:0002185 ! bronchus [Term] id: UBERON:0002036 name: striated muscle tissue namespace: FANTOM is_a: UBERON:0002385 ! muscle tissue [Term] id: UBERON:0002037 name: cerebellum namespace: FANTOM is_a: UBERON:0002680 ! regional part of metencephalon relationship: part_of UBERON:0001895 ! metencephalon relationship: part_of UBERON:0002028 ! hindbrain [Term] id: UBERON:0002038 name: substantia nigra namespace: FANTOM is_a: UBERON:0009661 ! midbrain nucleus is_a: UBERON:0009663 ! telencephalic nucleus relationship: part_of UBERON:0001891 ! midbrain relationship: part_of UBERON:0002420 ! basal ganglion [Term] id: UBERON:0002046 name: thyroid gland namespace: FANTOM is_a: UBERON:0002368 ! endocrine gland is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0000949 ! endocrine system [Term] id: UBERON:0002048 name: lung namespace: FANTOM is_a: UBERON:0000171 ! respiration organ is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0005178 ! thoracic cavity organ relationship: part_of UBERON:0000170 ! pair of lungs [Term] id: UBERON:0002049 name: vasculature namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster relationship: part_of UBERON:0007798 ! vascular system [Term] id: UBERON:0002050 name: embryonic structure namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure is_a: UBERON:0005423 ! developing anatomical structure intersection_of: UBERON:0000061 ! anatomical structure intersection_of: part_of UBERON:0000922 ! embryo relationship: part_of UBERON:0000922 ! embryo [Term] id: UBERON:0002066 name: umbilical vein namespace: FANTOM is_a: UBERON:0001638 ! vein is_a: UBERON:0010260 ! umbilical blood vessel [Term] id: UBERON:0002067 name: dermis namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0004923 ! organ component layer is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0002097 ! skin of body relationship: part_of UBERON:0002199 ! integument [Term] id: UBERON:0002072 name: hypodermis namespace: FANTOM is_a: UBERON:0002384 ! connective tissue is_a: UBERON:0004120 ! mesoderm-derived structure relationship: develops_from UBERON:0000926 ! mesoderm relationship: part_of UBERON:0002199 ! integument [Term] id: UBERON:0002073 name: hair follicle namespace: FANTOM is_a: UBERON:0000025 ! tube is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001003 ! epidermis relationship: part_of UBERON:0011932 ! pilosebaceous unit [Term] id: UBERON:0002075 name: viscus namespace: FANTOM is_a: UBERON:0005177 ! trunk organ relationship: part_of UBERON:0002100 ! trunk [Term] id: UBERON:0002078 name: right cardiac atrium namespace: FANTOM is_a: UBERON:0002081 ! cardiac atrium [Term] id: UBERON:0002079 name: left cardiac atrium namespace: FANTOM is_a: UBERON:0002081 ! cardiac atrium [Term] id: UBERON:0002081 name: cardiac atrium namespace: FANTOM is_a: UBERON:0004151 ! cardiac chamber [Term] id: UBERON:0002082 name: cardiac ventricle namespace: FANTOM is_a: UBERON:0004151 ! cardiac chamber [Term] id: UBERON:0002084 name: heart left ventricle namespace: FANTOM is_a: UBERON:0002082 ! cardiac ventricle [Term] id: UBERON:0002091 name: appendicular skeleton namespace: FANTOM is_a: UBERON:0010912 ! subdivision of skeleton relationship: part_of UBERON:0011249 ! appendicular skeletal system [Term] id: UBERON:0002097 name: skin of body namespace: FANTOM is_a: UBERON:0000062 ! organ is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0002199 ! integument [Term] id: UBERON:0002100 name: trunk namespace: FANTOM is_a: UBERON:0011676 ! subdivision of organism along main body axis relationship: part_of UBERON:0013702 ! body proper [Term] id: UBERON:0002101 name: limb namespace: FANTOM is_a: UBERON:0004708 ! limb/fin [Term] id: UBERON:0002102 name: forelimb namespace: FANTOM is_a: UBERON:0002101 ! limb is_a: UBERON:0004710 ! pectoral appendage intersection_of: UBERON:0002101 ! limb intersection_of: part_of UBERON:0010708 ! pectoral complex relationship: part_of UBERON:0000153 ! anterior region of body relationship: part_of UBERON:0010708 ! pectoral complex [Term] id: UBERON:0002103 name: hindlimb namespace: FANTOM is_a: UBERON:0002101 ! limb is_a: UBERON:0004709 ! pelvic appendage intersection_of: UBERON:0002101 ! limb intersection_of: part_of UBERON:0010709 ! pelvic complex relationship: part_of UBERON:0000154 ! posterior region of body relationship: part_of UBERON:0010709 ! pelvic complex [Term] id: UBERON:0002104 name: visual system namespace: FANTOM is_a: UBERON:0001032 ! sensory system [Term] id: UBERON:0002105 name: vestibulo-auditory system namespace: FANTOM is_a: UBERON:0007037 ! mechanosensory system [Term] id: UBERON:0002106 name: spleen namespace: FANTOM is_a: UBERON:0000077 ! mixed endoderm/mesoderm-derived structure is_a: UBERON:0002075 ! viscus is_a: UBERON:0004177 ! hemopoietic organ is_a: UBERON:0005057 ! immune organ is_a: UBERON:0005172 ! abdomen organ is_a: UBERON:0013765 ! digestive system organ relationship: part_of UBERON:0000916 ! abdomen relationship: part_of UBERON:0001007 ! digestive system relationship: part_of UBERON:0002390 ! hematopoietic system relationship: part_of UBERON:0002405 ! immune system [Term] id: UBERON:0002107 name: liver namespace: FANTOM is_a: UBERON:0002365 ! exocrine gland is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0005172 ! abdomen organ is_a: UBERON:0006925 ! digestive gland relationship: part_of UBERON:0000916 ! abdomen relationship: part_of UBERON:0000949 ! endocrine system relationship: part_of UBERON:0001007 ! digestive system relationship: part_of UBERON:0002330 ! exocrine system relationship: part_of UBERON:0002423 ! hepatobiliary system [Term] id: UBERON:0002108 name: small intestine namespace: FANTOM is_a: UBERON:0004921 ! subdivision of digestive tract is_a: UBERON:0013765 ! digestive system organ relationship: part_of UBERON:0000160 ! intestine [Term] id: UBERON:0002110 name: gallbladder namespace: FANTOM is_a: UBERON:0002075 ! viscus is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0005172 ! abdomen organ is_a: UBERON:0013765 ! digestive system organ relationship: part_of UBERON:0000916 ! abdomen relationship: part_of UBERON:0001173 ! biliary tree [Term] id: UBERON:0002113 name: kidney namespace: FANTOM is_a: UBERON:0000489 ! cavitated compound organ is_a: UBERON:0005172 ! abdomen organ is_a: UBERON:0006554 ! urinary system structure relationship: part_of UBERON:0000916 ! abdomen relationship: part_of UBERON:0011143 ! upper urinary tract [Term] id: UBERON:0002114 name: duodenum namespace: FANTOM is_a: UBERON:0004921 ! subdivision of digestive tract relationship: part_of UBERON:0002108 ! small intestine [Term] id: UBERON:0002116 name: ileum namespace: FANTOM is_a: UBERON:0004921 ! subdivision of digestive tract relationship: part_of UBERON:0002108 ! small intestine [Term] id: UBERON:0002118 name: right ovary namespace: FANTOM is_a: UBERON:0000992 ! female gonad [Term] id: UBERON:0002119 name: left ovary namespace: FANTOM is_a: UBERON:0000992 ! female gonad [Term] id: UBERON:0002133 name: atrioventricular valve namespace: FANTOM is_a: UBERON:0000946 ! cardial valve relationship: part_of UBERON:0011820 ! atrioventricular region [Term] id: UBERON:0002134 name: tricuspid valve namespace: FANTOM is_a: UBERON:0002133 ! atrioventricular valve is_a: UBERON:0005208 ! right atrium valve intersection_of: UBERON:0002133 ! atrioventricular valve intersection_of: part_of UBERON:0005965 ! outflow part of right atrium relationship: part_of UBERON:0005965 ! outflow part of right atrium [Term] id: UBERON:0002135 name: mitral valve namespace: FANTOM is_a: UBERON:0002133 ! atrioventricular valve intersection_of: UBERON:0002133 ! atrioventricular valve intersection_of: part_of UBERON:0005966 ! outflow part of left atrium relationship: part_of UBERON:0005966 ! outflow part of left atrium [Term] id: UBERON:0002146 name: pulmonary valve namespace: FANTOM is_a: UBERON:0005623 ! semi-lunar valve [Term] id: UBERON:0002148 name: locus ceruleus namespace: FANTOM is_a: UBERON:0002680 ! regional part of metencephalon is_a: UBERON:0006331 ! brainstem nucleus is_a: UBERON:0009662 ! hindbrain nucleus relationship: part_of UBERON:0000988 ! pons [Term] id: UBERON:0002167 name: right lung namespace: FANTOM is_a: UBERON:0002048 ! lung [Term] id: UBERON:0002169 name: alveolar sac namespace: FANTOM is_a: UBERON:0000115 ! lung epithelium is_a: UBERON:0000117 ! respiratory tube is_a: UBERON:0007499 ! epithelial sac intersection_of: UBERON:0007499 ! epithelial sac intersection_of: part_of UBERON:0008874 ! pulmonary acinus relationship: part_of UBERON:0006524 ! alveolar system relationship: part_of UBERON:0008874 ! pulmonary acinus [Term] id: UBERON:0002171 name: lower lobe of right lung namespace: FANTOM is_a: UBERON:0006518 ! right lung lobe is_a: UBERON:0008949 ! lower lobe of lung intersection_of: UBERON:0008949 ! lower lobe of lung intersection_of: part_of UBERON:0002167 ! right lung relationship: part_of UBERON:0002167 ! right lung [Term] id: UBERON:0002185 name: bronchus namespace: FANTOM is_a: UBERON:0000117 ! respiratory tube relationship: part_of UBERON:0007196 ! tracheobronchial tree [Term] id: UBERON:0002190 name: subcutaneous adipose tissue namespace: FANTOM is_a: UBERON:0001013 ! adipose tissue is_a: UBERON:0004120 ! mesoderm-derived structure intersection_of: UBERON:0001013 ! adipose tissue intersection_of: part_of UBERON:0002072 ! hypodermis relationship: part_of UBERON:0002072 ! hypodermis [Term] id: UBERON:0002193 name: hemolymphoid system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system [Term] id: UBERON:0002199 name: integument namespace: FANTOM is_a: UBERON:0003102 ! surface structure relationship: part_of UBERON:0002416 ! integumental system [Term] id: UBERON:0002200 name: vasculature of head namespace: FANTOM is_a: UBERON:0002049 ! vasculature intersection_of: UBERON:0002049 ! vasculature intersection_of: part_of UBERON:0000033 ! head relationship: part_of UBERON:0000033 ! head [Term] id: UBERON:0002201 name: vasculature of trunk namespace: FANTOM is_a: UBERON:0002049 ! vasculature intersection_of: UBERON:0002049 ! vasculature intersection_of: part_of UBERON:0002100 ! trunk relationship: part_of UBERON:0002100 ! trunk [Term] id: UBERON:0002203 name: vasculature of eye namespace: FANTOM is_a: UBERON:0002200 ! vasculature of head is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0006876 ! vasculature of organ intersection_of: UBERON:0002049 ! vasculature intersection_of: part_of UBERON:0000019 ! camera-type eye relationship: part_of UBERON:0000019 ! camera-type eye [Term] id: UBERON:0002204 name: musculoskeletal system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system [Term] id: UBERON:0002209 name: fibrous joint namespace: FANTOM is_a: UBERON:0011134 ! nonsynovial joint [Term] id: UBERON:0002213 name: cartilaginous joint namespace: FANTOM is_a: UBERON:0011134 ! nonsynovial joint [Term] id: UBERON:0002216 name: symphysis namespace: FANTOM is_a: UBERON:0002209 ! fibrous joint is_a: UBERON:0002213 ! cartilaginous joint [Term] id: UBERON:0002217 name: synovial joint namespace: FANTOM is_a: UBERON:0000982 ! skeletal joint [Term] id: UBERON:0002227 name: spiral organ of cochlea namespace: FANTOM is_a: UBERON:0000020 ! sense organ is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0006585 ! vestibular organ is_a: UBERON:0010313 ! neural crest-derived structure relationship: part_of UBERON:0001855 ! cochlear duct of membranous labyrinth relationship: part_of UBERON:0002295 ! scala media [Term] id: UBERON:0002240 name: spinal cord namespace: FANTOM is_a: UBERON:0000489 ! cavitated compound organ is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0005174 ! back organ is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001017 ! central nervous system relationship: part_of UBERON:0001137 ! dorsum [Term] id: UBERON:0002241 name: chondrocranium namespace: FANTOM is_a: UBERON:0011159 ! primary subdivision of cranial skeletal system [Term] id: UBERON:0002242 name: nucleus pulposus namespace: FANTOM is_a: UBERON:0002384 ! connective tissue is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001066 ! intervertebral disk [Term] id: UBERON:0002244 name: premaxilla namespace: FANTOM is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0002514 ! intramembranous bone is_a: UBERON:0008907 ! dermal bone is_a: UBERON:0011597 ! bone of upper jaw relationship: part_of UBERON:0003113 ! dermatocranium relationship: part_of UBERON:0003277 ! skeleton of upper jaw relationship: part_of UBERON:0011156 ! facial skeleton [Term] id: UBERON:0002256 name: dorsal horn of spinal cord namespace: FANTOM is_a: UBERON:0001948 ! regional part of spinal cord relationship: part_of UBERON:0002315 ! gray matter of spinal cord [Term] id: UBERON:0002257 name: ventral horn of spinal cord namespace: FANTOM is_a: UBERON:0001948 ! regional part of spinal cord relationship: part_of UBERON:0002315 ! gray matter of spinal cord [Term] id: UBERON:0002259 name: corpora quadrigemina namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0002314 ! midbrain tectum [Term] id: UBERON:0002275 name: reticular formation namespace: FANTOM is_a: UBERON:0000073 ! regional part of nervous system [Term] id: UBERON:0002284 name: hyponychium namespace: FANTOM is_a: UBERON:0010371 ! ecto-epithelium relationship: part_of UBERON:0002097 ! skin of body [Term] id: UBERON:0002294 name: biliary system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system relationship: part_of UBERON:0002423 ! hepatobiliary system [Term] id: UBERON:0002295 name: scala media namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0010313 ! neural crest-derived structure is_a: UBERON:0011060 ! perilymphatic channel is_a: UBERON:0013685 ! foramen of skull relationship: part_of UBERON:0001844 ! cochlea [Term] id: UBERON:0002298 name: brainstem namespace: FANTOM is_a: UBERON:0002616 ! regional part of brain is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0000955 ! brain [Term] id: UBERON:0002299 name: alveolus of lung namespace: FANTOM is_a: UBERON:0003215 ! alveolus is_a: UBERON:0004119 ! endoderm-derived structure intersection_of: UBERON:0003215 ! alveolus intersection_of: part_of UBERON:0002048 ! lung relationship: part_of UBERON:0002048 ! lung relationship: part_of UBERON:0002169 ! alveolar sac relationship: part_of UBERON:0006524 ! alveolar system [Term] id: UBERON:0002308 name: nucleus of brain namespace: FANTOM is_a: UBERON:0000125 ! neural nucleus is_a: UBERON:0002616 ! regional part of brain intersection_of: UBERON:0000125 ! neural nucleus intersection_of: part_of UBERON:0000955 ! brain relationship: part_of UBERON:0000955 ! brain relationship: part_of UBERON:0003528 ! brain grey matter [Term] id: UBERON:0002314 name: midbrain tectum namespace: FANTOM is_a: UBERON:0002950 ! regional part of midbrain relationship: part_of UBERON:0001891 ! midbrain [Term] id: UBERON:0002315 name: gray matter of spinal cord namespace: FANTOM is_a: UBERON:0002020 ! gray matter of neuraxis intersection_of: UBERON:0002020 ! gray matter of neuraxis intersection_of: part_of UBERON:0002240 ! spinal cord relationship: part_of UBERON:0002240 ! spinal cord [Term] id: UBERON:0002316 name: white matter namespace: FANTOM is_a: UBERON:0003714 ! neural tissue is_a: UBERON:0011215 ! cell part cluster of neuraxis relationship: part_of UBERON:0001017 ! central nervous system [Term] id: UBERON:0002330 name: exocrine system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system [Term] id: UBERON:0002331 name: umbilical cord namespace: FANTOM is_a: UBERON:0000478 ! extraembryonic structure is_a: UBERON:0004120 ! mesoderm-derived structure [Term] id: UBERON:0002336 name: corpus callosum namespace: FANTOM is_a: UBERON:0002473 ! intercerebral commissure is_a: UBERON:0005340 ! dorsal telencephalic commissure [Term] id: UBERON:0002346 name: neurectoderm namespace: FANTOM is_a: UBERON:0000923 ! germ layer is_a: UBERON:0004121 ! ectoderm-derived structure [Term] id: UBERON:0002355 name: pelvis namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision relationship: part_of UBERON:0002417 ! abdominal segment of trunk [Term] id: UBERON:0002358 name: peritoneum namespace: FANTOM is_a: UBERON:0000042 ! serous membrane relationship: develops_from UBERON:0000926 ! mesoderm relationship: part_of UBERON:0003697 ! abdominal wall [Term] id: UBERON:0002360 name: meninx namespace: FANTOM is_a: UBERON:0000094 ! membrane organ is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0010743 ! meningeal cluster [Term] id: UBERON:0002363 name: dura mater namespace: FANTOM is_a: UBERON:0002360 ! meninx is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest [Term] id: UBERON:0002365 name: exocrine gland namespace: FANTOM is_a: UBERON:0002530 ! gland intersection_of: UBERON:0002530 ! gland intersection_of: part_of UBERON:0002330 ! exocrine system relationship: part_of UBERON:0002330 ! exocrine system [Term] id: UBERON:0002367 name: prostate gland namespace: FANTOM is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0010147 ! male accessory sex gland [Term] id: UBERON:0002368 name: endocrine gland namespace: FANTOM is_a: UBERON:0002530 ! gland intersection_of: UBERON:0002530 ! gland intersection_of: part_of UBERON:0000949 ! endocrine system relationship: part_of UBERON:0000949 ! endocrine system [Term] id: UBERON:0002369 name: adrenal gland namespace: FANTOM is_a: UBERON:0006858 ! adrenal/interrenal gland relationship: part_of UBERON:0000916 ! abdomen relationship: part_of UBERON:0000949 ! endocrine system [Term] id: UBERON:0002370 name: thymus namespace: FANTOM is_a: UBERON:0000077 ! mixed endoderm/mesoderm-derived structure is_a: UBERON:0002368 ! endocrine gland is_a: UBERON:0004177 ! hemopoietic organ is_a: UBERON:0005057 ! immune organ is_a: UBERON:0005058 ! hemolymphoid system gland relationship: part_of UBERON:0000949 ! endocrine system relationship: part_of UBERON:0002390 ! hematopoietic system relationship: part_of UBERON:0002405 ! immune system relationship: part_of UBERON:0009113 ! thymic region [Term] id: UBERON:0002371 name: bone marrow namespace: FANTOM is_a: UBERON:0012429 ! hemopoietic tissue relationship: part_of UBERON:0001474 ! bone element relationship: part_of UBERON:0002390 ! hematopoietic system relationship: part_of UBERON:0002405 ! immune system [Term] id: UBERON:0002372 name: tonsil namespace: FANTOM is_a: UBERON:0001962 ! gut-associated lymphoid tissue relationship: part_of UBERON:0001735 ! tonsillar ring [Term] id: UBERON:0002376 name: muscle of head namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0010959 ! craniocervical muscle intersection_of: UBERON:0001630 ! muscle organ intersection_of: part_of UBERON:0000033 ! head relationship: develops_from UBERON:0006904 ! head mesenchyme from mesoderm relationship: part_of UBERON:0000033 ! head relationship: part_of UBERON:0004461 ! musculature of head [Term] id: UBERON:0002384 name: connective tissue namespace: FANTOM is_a: UBERON:0000479 ! tissue [Term] id: UBERON:0002385 name: muscle tissue namespace: FANTOM is_a: UBERON:0000479 ! tissue is_a: UBERON:0004120 ! mesoderm-derived structure relationship: develops_from UBERON:0000926 ! mesoderm relationship: part_of UBERON:0001015 ! musculature [Term] id: UBERON:0002390 name: hematopoietic system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system is_a: UBERON:0004120 ! mesoderm-derived structure relationship: part_of UBERON:0002193 ! hemolymphoid system [Term] id: UBERON:0002394 name: bile duct namespace: FANTOM is_a: UBERON:0003928 ! digestive system duct is_a: UBERON:0004119 ! endoderm-derived structure relationship: part_of UBERON:0001173 ! biliary tree relationship: part_of UBERON:0002294 ! biliary system [Term] id: UBERON:0002398 name: manus namespace: FANTOM is_a: UBERON:0002470 ! autopod region is_a: UBERON:0008785 ! upper limb segment intersection_of: UBERON:0002470 ! autopod region intersection_of: part_of UBERON:0002102 ! forelimb relationship: part_of UBERON:0002102 ! forelimb [Term] id: UBERON:0002405 name: immune system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system [Term] id: UBERON:0002410 name: autonomic nervous system namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0011216 ! organ system subdivision relationship: part_of UBERON:0000010 ! peripheral nervous system [Term] id: UBERON:0002412 name: vertebra namespace: FANTOM is_a: UBERON:0002513 ! endochondral bone is_a: UBERON:0008001 ! irregular bone is_a: UBERON:0010913 ! vertebral element relationship: part_of UBERON:0001130 ! vertebral column [Term] id: UBERON:0002416 name: integumental system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system [Term] id: UBERON:0002417 name: abdominal segment of trunk namespace: FANTOM is_a: UBERON:0009569 ! subdivision of trunk is_a: UBERON:0011676 ! subdivision of organism along main body axis [Term] id: UBERON:0002418 name: cartilage tissue namespace: FANTOM is_a: UBERON:0004755 ! skeletal tissue relationship: part_of UBERON:0002204 ! musculoskeletal system [Term] id: UBERON:0002419 name: skin gland namespace: FANTOM is_a: UBERON:0003297 ! gland of integumental system is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0006003 ! integumentary adnexa intersection_of: UBERON:0002530 ! gland intersection_of: part_of UBERON:0002097 ! skin of body relationship: part_of UBERON:0002097 ! skin of body [Term] id: UBERON:0002420 name: basal ganglion namespace: FANTOM is_a: UBERON:0007245 ! nuclear complex of neuraxis is_a: UBERON:0011300 ! gray matter of telencephalon relationship: part_of UBERON:0010011 ! collection of basal ganglia [Term] id: UBERON:0002421 name: hippocampal formation namespace: FANTOM is_a: UBERON:0002791 ! regional part of telencephalon relationship: part_of UBERON:0000203 ! pallium [Term] id: UBERON:0002423 name: hepatobiliary system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system relationship: part_of UBERON:0001007 ! digestive system [Term] id: UBERON:0002424 name: oral epithelium namespace: FANTOM is_a: UBERON:0003350 ! epithelium of mucosa is_a: UBERON:0003929 ! gut epithelium is_a: UBERON:0010371 ! ecto-epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0003729 ! mouth mucosa relationship: part_of UBERON:0003729 ! mouth mucosa [Term] id: UBERON:0002426 name: chest muscle namespace: FANTOM is_a: UBERON:0003830 ! thoracic segment muscle is_a: UBERON:0005175 ! chest organ intersection_of: UBERON:0001630 ! muscle organ intersection_of: part_of UBERON:0001443 ! chest relationship: part_of UBERON:0001443 ! chest [Term] id: UBERON:0002428 name: limb bone namespace: FANTOM is_a: UBERON:0002513 ! endochondral bone is_a: UBERON:0004375 ! bone of free limb or fin intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0002101 ! limb relationship: part_of UBERON:0002101 ! limb relationship: part_of UBERON:0004381 ! skeleton of limb [Term] id: UBERON:0002435 name: striatum namespace: FANTOM is_a: UBERON:0011300 ! gray matter of telencephalon relationship: part_of UBERON:0000204 ! ventral part of telencephalon relationship: part_of UBERON:0000369 ! corpus striatum relationship: part_of UBERON:0002420 ! basal ganglion [Term] id: UBERON:0002437 name: cerebral white matter namespace: FANTOM is_a: UBERON:0011299 ! white matter of telencephalon intersection_of: UBERON:0002316 ! white matter intersection_of: part_of UBERON:0001869 ! cerebral hemisphere relationship: part_of UBERON:0001869 ! cerebral hemisphere [Term] id: UBERON:0002448 name: fungiform papilla namespace: FANTOM is_a: UBERON:0014389 ! gustatory papilla of tongue [Term] id: UBERON:0002456 name: internal thoracic artery namespace: FANTOM is_a: UBERON:0004573 ! systemic artery relationship: part_of UBERON:0001533 ! subclavian artery [Term] id: UBERON:0002464 name: nerve trunk namespace: FANTOM is_a: UBERON:0004732 ! segmental subdivision of nervous system relationship: part_of UBERON:0001016 ! nervous system [Term] id: UBERON:0002465 name: lymphoid system namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster relationship: part_of UBERON:0002193 ! hemolymphoid system relationship: part_of UBERON:0002405 ! immune system [Term] id: UBERON:0002470 name: autopod region namespace: FANTOM is_a: UBERON:0002529 ! limb segment [Term] id: UBERON:0002471 name: zeugopod namespace: FANTOM is_a: UBERON:0002529 ! limb segment [Term] id: UBERON:0002472 name: stylopod namespace: FANTOM is_a: UBERON:0002529 ! limb segment relationship: part_of UBERON:0002101 ! limb [Term] id: UBERON:0002473 name: intercerebral commissure namespace: FANTOM is_a: UBERON:0005970 ! brain commissure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001893 ! telencephalon relationship: part_of UBERON:0002437 ! cerebral white matter [Term] id: UBERON:0002495 name: long bone namespace: FANTOM is_a: UBERON:0001474 ! bone element relationship: part_of UBERON:0002091 ! appendicular skeleton [Term] id: UBERON:0002499 name: cochlear labyrinth namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0010313 ! neural crest-derived structure relationship: part_of UBERON:0001849 ! membranous labyrinth [Term] id: UBERON:0002506 name: iris epithelium namespace: FANTOM is_a: UBERON:0000488 ! atypical epithelium is_a: UBERON:0007625 ! pigment epithelium of eye is_a: UBERON:0010371 ! ecto-epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001769 ! iris relationship: part_of UBERON:0001769 ! iris [Term] id: UBERON:0002513 name: endochondral bone namespace: FANTOM is_a: UBERON:0001474 ! bone element is_a: UBERON:0010363 ! endochondral element relationship: develops_from UBERON:0007844 ! cartilage element [Term] id: UBERON:0002514 name: intramembranous bone namespace: FANTOM is_a: UBERON:0001474 ! bone element relationship: develops_from UBERON:0003104 ! mesenchyme [Term] id: UBERON:0002517 name: basicranium namespace: FANTOM is_a: UBERON:0000075 ! subdivision of skeletal system is_a: UBERON:0004120 ! mesoderm-derived structure relationship: part_of UBERON:0001703 ! neurocranium relationship: part_of UBERON:0002241 ! chondrocranium [Term] id: UBERON:0002529 name: limb segment namespace: FANTOM is_a: UBERON:0010538 ! limb/fin segment intersection_of: UBERON:0010758 ! subdivision of organism along appendicular axis intersection_of: part_of UBERON:0002101 ! limb relationship: part_of UBERON:0002101 ! limb [Term] id: UBERON:0002530 name: gland namespace: FANTOM is_a: UBERON:0000062 ! organ [Term] id: UBERON:0002544 name: digit namespace: FANTOM is_a: UBERON:0005881 ! limb outgrowth relationship: part_of UBERON:0012140 ! digitopodium region relationship: part_of UBERON:0012354 ! acropodium region [Term] id: UBERON:0002553 name: anatomical cavity namespace: FANTOM is_a: UBERON:0000464 ! anatomical space [Term] id: UBERON:0002581 name: postcentral gyrus namespace: FANTOM is_a: UBERON:0000200 ! gyrus relationship: part_of UBERON:0001872 ! parietal lobe [Term] id: UBERON:0002600 name: limbic lobe namespace: FANTOM is_a: UBERON:0003022 ! lobe parts of cerebral cortex [Term] id: UBERON:0002616 name: regional part of brain namespace: FANTOM is_a: UBERON:0000073 ! regional part of nervous system intersection_of: UBERON:0000481 ! multi-tissue structure intersection_of: part_of UBERON:0000955 ! brain relationship: part_of UBERON:0000955 ! brain [Term] id: UBERON:0002619 name: regional part of cerebral cortex namespace: FANTOM is_a: UBERON:0002791 ! regional part of telencephalon intersection_of: UBERON:0000481 ! multi-tissue structure intersection_of: part_of UBERON:0000956 ! cerebral cortex relationship: part_of UBERON:0000956 ! cerebral cortex [Term] id: UBERON:0002680 name: regional part of metencephalon namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0002616 ! regional part of brain is_a: UBERON:0010314 ! structure with developmental contribution from neural crest intersection_of: UBERON:0000481 ! multi-tissue structure intersection_of: part_of UBERON:0001895 ! metencephalon relationship: part_of UBERON:0001895 ! metencephalon [Term] id: UBERON:0002702 name: middle frontal gyrus namespace: FANTOM is_a: UBERON:0000200 ! gyrus relationship: part_of UBERON:0001870 ! frontal cortex [Term] id: UBERON:0002757 name: regional part of epithalamus namespace: FANTOM is_a: UBERON:0002784 ! regional part of diencephalon intersection_of: UBERON:0000481 ! multi-tissue structure intersection_of: part_of UBERON:0001899 ! epithalamus relationship: part_of UBERON:0001899 ! epithalamus [Term] id: UBERON:0002771 name: middle temporal gyrus namespace: FANTOM is_a: UBERON:0000200 ! gyrus relationship: part_of UBERON:0001871 ! temporal lobe [Term] id: UBERON:0002780 name: regional part of forebrain namespace: FANTOM is_a: UBERON:0002616 ! regional part of brain intersection_of: UBERON:0000481 ! multi-tissue structure intersection_of: part_of UBERON:0001890 ! forebrain relationship: part_of UBERON:0001890 ! forebrain [Term] id: UBERON:0002784 name: regional part of diencephalon namespace: FANTOM is_a: UBERON:0002780 ! regional part of forebrain intersection_of: UBERON:0000481 ! multi-tissue structure intersection_of: part_of UBERON:0001894 ! diencephalon relationship: part_of UBERON:0001894 ! diencephalon [Term] id: UBERON:0002791 name: regional part of telencephalon namespace: FANTOM is_a: UBERON:0002780 ! regional part of forebrain is_a: UBERON:0010314 ! structure with developmental contribution from neural crest intersection_of: UBERON:0000481 ! multi-tissue structure intersection_of: part_of UBERON:0001893 ! telencephalon relationship: part_of UBERON:0001893 ! telencephalon [Term] id: UBERON:0002902 name: occipital pole namespace: FANTOM is_a: UBERON:0009899 ! pole of cerebral hemisphere intersection_of: UBERON:0009899 ! pole of cerebral hemisphere intersection_of: part_of UBERON:0002021 ! occipital lobe relationship: part_of UBERON:0002021 ! occipital lobe [Term] id: UBERON:0002950 name: regional part of midbrain namespace: FANTOM is_a: UBERON:0002616 ! regional part of brain intersection_of: UBERON:0000481 ! multi-tissue structure intersection_of: part_of UBERON:0001891 ! midbrain relationship: part_of UBERON:0001891 ! midbrain [Term] id: UBERON:0003022 name: lobe parts of cerebral cortex namespace: FANTOM is_a: UBERON:0002619 ! regional part of cerebral cortex [Term] id: UBERON:0003100 name: female organism namespace: FANTOM is_a: UBERON:0000468 ! multi-cellular organism [Term] id: UBERON:0003101 name: male organism namespace: FANTOM is_a: UBERON:0000468 ! multi-cellular organism [Term] id: UBERON:0003102 name: surface structure namespace: FANTOM is_a: UBERON:0000481 ! multi-tissue structure relationship: part_of UBERON:0007029 ! external covering of organism [Term] id: UBERON:0003103 name: compound organ namespace: FANTOM is_a: UBERON:0000062 ! organ [Term] id: UBERON:0003104 name: mesenchyme namespace: FANTOM is_a: UBERON:0000479 ! tissue relationship: part_of UBERON:0009142 ! entire mesenchyme [Term] id: UBERON:0003112 name: olfactory region namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0004120 ! mesoderm-derived structure relationship: part_of UBERON:0001703 ! neurocranium relationship: part_of UBERON:0002241 ! chondrocranium [Term] id: UBERON:0003113 name: dermatocranium namespace: FANTOM is_a: UBERON:0011159 ! primary subdivision of cranial skeletal system relationship: part_of UBERON:0010323 ! cranial skeletal system relationship: part_of UBERON:0010364 ! dermal skeleton [Term] id: UBERON:0003124 name: chorion namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0005631 ! extraembryonic membrane [Term] id: UBERON:0003126 name: trachea namespace: FANTOM is_a: UBERON:0000117 ! respiratory tube relationship: part_of UBERON:0007196 ! tracheobronchial tree [Term] id: UBERON:0003128 name: cranium namespace: FANTOM is_a: UBERON:0000075 ! subdivision of skeletal system relationship: part_of UBERON:0003129 ! skull [Term] id: UBERON:0003129 name: skull namespace: FANTOM is_a: UBERON:0000075 ! subdivision of skeletal system is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0000033 ! head relationship: part_of UBERON:0010323 ! cranial skeletal system [Term] id: UBERON:0003133 name: reproductive organ namespace: FANTOM is_a: UBERON:0000062 ! organ is_a: UBERON:0005156 ! reproductive structure relationship: part_of UBERON:0000990 ! reproductive system [Term] id: UBERON:0003134 name: female reproductive organ namespace: FANTOM is_a: UBERON:0003133 ! reproductive organ is_a: UBERON:0014404 ! female anatomical structure intersection_of: UBERON:0003133 ! reproductive organ intersection_of: part_of UBERON:0003100 ! female organism relationship: part_of UBERON:0000474 ! female reproductive system relationship: part_of UBERON:0003100 ! female organism [Term] id: UBERON:0003135 name: male reproductive organ namespace: FANTOM is_a: UBERON:0003133 ! reproductive organ is_a: UBERON:0014403 ! male anatomical structure intersection_of: UBERON:0003133 ! reproductive organ intersection_of: part_of UBERON:0003101 ! male organism relationship: part_of UBERON:0000079 ! male reproductive system relationship: part_of UBERON:0003101 ! male organism [Term] id: UBERON:0003199 name: egg chamber namespace: FANTOM is_a: UBERON:0000464 ! anatomical space [Term] id: UBERON:0003210 name: blood-cerebrospinal fluid barrier namespace: FANTOM is_a: UBERON:0000119 ! cell layer [Term] id: UBERON:0003215 name: alveolus namespace: FANTOM is_a: UBERON:0000064 ! organ part [Term] id: UBERON:0003269 name: skeletal muscle of eye namespace: FANTOM is_a: UBERON:0003899 ! skeletal muscle of head is_a: UBERON:0004121 ! ectoderm-derived structure intersection_of: UBERON:0001134 ! skeletal muscle tissue intersection_of: part_of UBERON:0000019 ! camera-type eye relationship: part_of UBERON:0000019 ! camera-type eye [Term] id: UBERON:0003277 name: skeleton of upper jaw namespace: FANTOM is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010912 ! subdivision of skeleton relationship: part_of UBERON:0001708 ! jaw skeleton relationship: part_of UBERON:0001709 ! upper jaw region [Term] id: UBERON:0003294 name: gland of foregut namespace: FANTOM is_a: UBERON:0003408 ! gland of gut intersection_of: UBERON:0002530 ! gland intersection_of: part_of UBERON:0001041 ! foregut relationship: part_of UBERON:0001041 ! foregut [Term] id: UBERON:0003296 name: gland of diencephalon namespace: FANTOM is_a: UBERON:0002530 ! gland is_a: UBERON:0004121 ! ectoderm-derived structure intersection_of: UBERON:0002530 ! gland intersection_of: part_of UBERON:0001894 ! diencephalon relationship: part_of UBERON:0001894 ! diencephalon [Term] id: UBERON:0003297 name: gland of integumental system namespace: FANTOM is_a: UBERON:0002530 ! gland intersection_of: UBERON:0002530 ! gland intersection_of: part_of UBERON:0002416 ! integumental system relationship: part_of UBERON:0002416 ! integumental system [Term] id: UBERON:0003323 name: mesenchyme of upper jaw namespace: FANTOM is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0009891 ! facial mesenchyme is_a: UBERON:0010314 ! structure with developmental contribution from neural crest intersection_of: UBERON:0003104 ! mesenchyme intersection_of: part_of UBERON:0001709 ! upper jaw region relationship: part_of UBERON:0001709 ! upper jaw region [Term] id: UBERON:0003343 name: mucosa of oral region namespace: FANTOM is_a: UBERON:0003729 ! mouth mucosa intersection_of: UBERON:0000344 ! mucosa intersection_of: part_of UBERON:0000166 ! oral opening relationship: part_of UBERON:0000166 ! oral opening [Term] id: UBERON:0003350 name: epithelium of mucosa namespace: FANTOM is_a: UBERON:0000483 ! epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0000344 ! mucosa relationship: part_of UBERON:0000344 ! mucosa [Term] id: UBERON:0003408 name: gland of gut namespace: FANTOM is_a: UBERON:0002530 ! gland is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0013765 ! digestive system organ intersection_of: UBERON:0002530 ! gland intersection_of: part_of UBERON:0001555 ! digestive tract relationship: part_of UBERON:0001555 ! digestive tract [Term] id: UBERON:0003422 name: mesenchyme of umbilical cord namespace: FANTOM is_a: UBERON:0003104 ! mesenchyme is_a: UBERON:0004120 ! mesoderm-derived structure intersection_of: UBERON:0003104 ! mesenchyme intersection_of: part_of UBERON:0002331 ! umbilical cord relationship: part_of UBERON:0002331 ! umbilical cord [Term] id: UBERON:0003457 name: head bone namespace: FANTOM is_a: UBERON:0007914 ! head or neck bone intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0000033 ! head relationship: part_of UBERON:0000033 ! head [Term] id: UBERON:0003462 name: facial bone namespace: FANTOM is_a: UBERON:0003457 ! head bone is_a: UBERON:0010313 ! neural crest-derived structure intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0011156 ! facial skeleton relationship: part_of UBERON:0011156 ! facial skeleton [Term] id: UBERON:0003464 name: hindlimb bone namespace: FANTOM is_a: UBERON:0002428 ! limb bone is_a: UBERON:0010742 ! bone of pelvic complex intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0002103 ! hindlimb relationship: part_of UBERON:0001441 ! hindlimb skeleton relationship: part_of UBERON:0002103 ! hindlimb [Term] id: UBERON:0003487 name: skin sebaceous gland namespace: FANTOM is_a: UBERON:0001821 ! sebaceous gland relationship: part_of UBERON:0002097 ! skin of body relationship: part_of UBERON:0011932 ! pilosebaceous unit [Term] id: UBERON:0003497 name: abdomen blood vessel namespace: FANTOM is_a: UBERON:0003835 ! abdominal segment blood vessel intersection_of: UBERON:0001981 ! blood vessel intersection_of: part_of UBERON:0000916 ! abdomen relationship: part_of UBERON:0000916 ! abdomen [Term] id: UBERON:0003498 name: heart blood vessel namespace: FANTOM is_a: UBERON:0001981 ! blood vessel is_a: UBERON:0005985 ! coronary vessel intersection_of: UBERON:0001981 ! blood vessel intersection_of: part_of UBERON:0000948 ! heart relationship: part_of UBERON:0000948 ! heart [Term] id: UBERON:0003509 name: arterial blood vessel namespace: FANTOM is_a: UBERON:0001981 ! blood vessel intersection_of: UBERON:0001981 ! blood vessel intersection_of: part_of UBERON:0004572 ! arterial system relationship: part_of UBERON:0004572 ! arterial system [Term] id: UBERON:0003513 name: trunk blood vessel namespace: FANTOM is_a: UBERON:0001981 ! blood vessel intersection_of: UBERON:0001981 ! blood vessel intersection_of: part_of UBERON:0002100 ! trunk relationship: part_of UBERON:0002100 ! trunk [Term] id: UBERON:0003528 name: brain grey matter namespace: FANTOM is_a: UBERON:0002020 ! gray matter of neuraxis intersection_of: UBERON:0002020 ! gray matter of neuraxis intersection_of: part_of UBERON:0000955 ! brain relationship: part_of UBERON:0000955 ! brain [Term] id: UBERON:0003531 name: forelimb skin namespace: FANTOM is_a: UBERON:0001419 ! skin of limb intersection_of: UBERON:0000014 ! zone of skin intersection_of: part_of UBERON:0002102 ! forelimb relationship: part_of UBERON:0002102 ! forelimb [Term] id: UBERON:0003544 name: brain white matter namespace: FANTOM is_a: UBERON:0002316 ! white matter intersection_of: UBERON:0002316 ! white matter intersection_of: part_of UBERON:0000955 ! brain relationship: part_of UBERON:0000955 ! brain [Term] id: UBERON:0003566 name: head connective tissue namespace: FANTOM is_a: UBERON:0002384 ! connective tissue intersection_of: UBERON:0002384 ! connective tissue intersection_of: part_of UBERON:0000033 ! head relationship: part_of UBERON:0000033 ! head [Term] id: UBERON:0003569 name: leg connective tissue namespace: FANTOM is_a: UBERON:0003589 ! hindlimb connective tissue intersection_of: UBERON:0002384 ! connective tissue intersection_of: part_of UBERON:0000978 ! leg relationship: part_of UBERON:0000978 ! leg [Term] id: UBERON:0003577 name: knee connective tissue namespace: FANTOM is_a: UBERON:0003569 ! leg connective tissue intersection_of: UBERON:0002384 ! connective tissue intersection_of: part_of UBERON:0001465 ! knee relationship: part_of UBERON:0001465 ! knee [Term] id: UBERON:0003587 name: limb connective tissue namespace: FANTOM is_a: UBERON:0002384 ! connective tissue intersection_of: UBERON:0002384 ! connective tissue intersection_of: part_of UBERON:0002101 ! limb relationship: part_of UBERON:0002101 ! limb [Term] id: UBERON:0003589 name: hindlimb connective tissue namespace: FANTOM is_a: UBERON:0003587 ! limb connective tissue intersection_of: UBERON:0002384 ! connective tissue intersection_of: part_of UBERON:0002103 ! hindlimb relationship: part_of UBERON:0002103 ! hindlimb [Term] id: UBERON:0003606 name: limb long bone namespace: FANTOM is_a: UBERON:0002428 ! limb bone is_a: UBERON:0002495 ! long bone intersection_of: UBERON:0002495 ! long bone intersection_of: part_of UBERON:0002101 ! limb relationship: part_of UBERON:0002101 ! limb [Term] id: UBERON:0003608 name: hindlimb long bone namespace: FANTOM is_a: UBERON:0003464 ! hindlimb bone is_a: UBERON:0003606 ! limb long bone intersection_of: UBERON:0002495 ! long bone intersection_of: part_of UBERON:0002103 ! hindlimb relationship: part_of UBERON:0002103 ! hindlimb [Term] id: UBERON:0003657 name: limb joint namespace: FANTOM is_a: UBERON:0000982 ! skeletal joint intersection_of: UBERON:0000982 ! skeletal joint intersection_of: part_of UBERON:0002101 ! limb relationship: part_of UBERON:0002101 ! limb [Term] id: UBERON:0003661 name: limb muscle namespace: FANTOM is_a: UBERON:0001630 ! muscle organ intersection_of: UBERON:0001630 ! muscle organ intersection_of: part_of UBERON:0002101 ! limb relationship: part_of UBERON:0002101 ! limb [Term] id: UBERON:0003663 name: hindlimb muscle namespace: FANTOM is_a: UBERON:0003661 ! limb muscle is_a: UBERON:0010890 ! pelvic complex muscle intersection_of: UBERON:0001630 ! muscle organ intersection_of: part_of UBERON:0002103 ! hindlimb relationship: part_of UBERON:0002103 ! hindlimb [Term] id: UBERON:0003672 name: dentition namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0000165 ! mouth relationship: part_of UBERON:0010323 ! cranial skeletal system [Term] id: UBERON:0003688 name: omentum namespace: FANTOM is_a: UBERON:0000063 ! organ segment is_a: UBERON:0004120 ! mesoderm-derived structure relationship: part_of UBERON:0001178 ! visceral peritoneum [Term] id: UBERON:0003697 name: abdominal wall namespace: FANTOM is_a: UBERON:0000060 ! anatomical wall intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0000916 ! abdomen relationship: part_of UBERON:0000916 ! abdomen [Term] id: UBERON:0003701 name: calcaneal tendon namespace: FANTOM is_a: UBERON:0000043 ! tendon is_a: UBERON:0004270 ! lower leg connective tissue is_a: UBERON:0008846 ! skeletal ligament relationship: part_of UBERON:0001665 ! triceps surae [Term] id: UBERON:0003703 name: extrahepatic bile duct namespace: FANTOM is_a: UBERON:0002394 ! bile duct [Term] id: UBERON:0003704 name: intrahepatic bile duct namespace: FANTOM is_a: UBERON:0002394 ! bile duct intersection_of: UBERON:0002394 ! bile duct intersection_of: part_of UBERON:0002107 ! liver relationship: part_of UBERON:0002107 ! liver [Term] id: UBERON:0003714 name: neural tissue namespace: FANTOM is_a: UBERON:0000479 ! tissue is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001016 ! nervous system [Term] id: UBERON:0003729 name: mouth mucosa namespace: FANTOM is_a: UBERON:0000344 ! mucosa is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure intersection_of: UBERON:0000344 ! mucosa intersection_of: part_of UBERON:0000165 ! mouth relationship: part_of UBERON:0000165 ! mouth [Term] id: UBERON:0003823 name: hindlimb zeugopod namespace: FANTOM is_a: UBERON:0002471 ! zeugopod is_a: UBERON:0008784 ! lower limb segment intersection_of: UBERON:0002471 ! zeugopod intersection_of: part_of UBERON:0002103 ! hindlimb relationship: part_of UBERON:0000978 ! leg relationship: part_of UBERON:0002103 ! hindlimb [Term] id: UBERON:0003826 name: upper leg bone namespace: FANTOM is_a: UBERON:0005893 ! leg bone intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0000376 ! hindlimb stylopod relationship: part_of UBERON:0000376 ! hindlimb stylopod [Term] id: UBERON:0003830 name: thoracic segment muscle namespace: FANTOM is_a: UBERON:0001774 ! muscle of trunk is_a: UBERON:0005181 ! thoracic segment organ intersection_of: UBERON:0001630 ! muscle organ intersection_of: part_of UBERON:0000915 ! thoracic segment of trunk relationship: part_of UBERON:0000915 ! thoracic segment of trunk [Term] id: UBERON:0003831 name: respiratory system muscle namespace: FANTOM is_a: UBERON:0001630 ! muscle organ intersection_of: UBERON:0001630 ! muscle organ intersection_of: part_of UBERON:0001004 ! respiratory system relationship: part_of UBERON:0001004 ! respiratory system [Term] id: UBERON:0003835 name: abdominal segment blood vessel namespace: FANTOM is_a: UBERON:0003513 ! trunk blood vessel intersection_of: UBERON:0001981 ! blood vessel intersection_of: part_of UBERON:0002417 ! abdominal segment of trunk relationship: part_of UBERON:0002417 ! abdominal segment of trunk [Term] id: UBERON:0003840 name: hindlimb joint namespace: FANTOM is_a: UBERON:0003657 ! limb joint intersection_of: UBERON:0000982 ! skeletal joint intersection_of: part_of UBERON:0002103 ! hindlimb relationship: part_of UBERON:0002103 ! hindlimb [Term] id: UBERON:0003889 name: fallopian tube namespace: FANTOM is_a: UBERON:0000025 ! tube is_a: UBERON:0005156 ! reproductive structure is_a: UBERON:0014404 ! female anatomical structure relationship: part_of UBERON:0000993 ! oviduct relationship: part_of UBERON:0002355 ! pelvis [Term] id: UBERON:0003891 name: stroma namespace: FANTOM is_a: UBERON:0002384 ! connective tissue [Term] id: UBERON:0003897 name: axial muscle namespace: FANTOM is_a: UBERON:0002385 ! muscle tissue intersection_of: UBERON:0002385 ! muscle tissue intersection_of: part_of UBERON:0013700 ! axial musculature relationship: part_of UBERON:0013700 ! axial musculature [Term] id: UBERON:0003899 name: skeletal muscle of head namespace: FANTOM is_a: UBERON:0001134 ! skeletal muscle tissue is_a: UBERON:0003897 ! axial muscle intersection_of: UBERON:0001134 ! skeletal muscle tissue intersection_of: part_of UBERON:0000033 ! head relationship: part_of UBERON:0000033 ! head relationship: part_of UBERON:0004461 ! musculature of head relationship: part_of UBERON:0013700 ! axial musculature [Term] id: UBERON:0003909 name: sinusoid namespace: FANTOM is_a: UBERON:2005260 ! fenestrated capillary [Term] id: UBERON:0003914 name: epithelial tube namespace: FANTOM is_a: UBERON:0000025 ! tube is_a: UBERON:0000483 ! epithelium [Term] id: UBERON:0003915 name: endothelial tube namespace: FANTOM is_a: UBERON:0001986 ! endothelium is_a: UBERON:0003914 ! epithelial tube [Term] id: UBERON:0003920 name: venous blood vessel namespace: FANTOM is_a: UBERON:0001981 ! blood vessel intersection_of: UBERON:0001981 ! blood vessel intersection_of: part_of UBERON:0004582 ! venous system relationship: part_of UBERON:0004582 ! venous system [Term] id: UBERON:0003928 name: digestive system duct namespace: FANTOM is_a: UBERON:0000058 ! duct intersection_of: UBERON:0000058 ! duct intersection_of: part_of UBERON:0001007 ! digestive system relationship: part_of UBERON:0001007 ! digestive system [Term] id: UBERON:0003929 name: gut epithelium namespace: FANTOM is_a: UBERON:0005911 ! endo-epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001555 ! digestive tract relationship: part_of UBERON:0001555 ! digestive tract [Term] id: UBERON:0003937 name: sex gland namespace: FANTOM is_a: UBERON:0002530 ! gland is_a: UBERON:0005156 ! reproductive structure intersection_of: UBERON:0002530 ! gland intersection_of: part_of UBERON:0000990 ! reproductive system relationship: part_of UBERON:0000990 ! reproductive system [Term] id: UBERON:0003956 name: aqueous drainage system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001768 ! uvea [Term] id: UBERON:0003968 name: peripheral lymph node namespace: FANTOM is_a: UBERON:0000029 ! lymph node [Term] id: UBERON:0003975 name: internal female genitalia namespace: FANTOM is_a: UBERON:0003134 ! female reproductive organ is_a: UBERON:0004175 ! internal genitalia intersection_of: UBERON:0004175 ! internal genitalia intersection_of: part_of UBERON:0000474 ! female reproductive system relationship: part_of UBERON:0000474 ! female reproductive system [Term] id: UBERON:0003978 name: valve namespace: FANTOM is_a: UBERON:0000064 ! organ part [Term] id: UBERON:0004054 name: internal male genitalia namespace: FANTOM is_a: UBERON:0003135 ! male reproductive organ is_a: UBERON:0004175 ! internal genitalia intersection_of: UBERON:0004175 ! internal genitalia intersection_of: part_of UBERON:0000079 ! male reproductive system relationship: part_of UBERON:0000079 ! male reproductive system [Term] id: UBERON:0004086 name: brain ventricle namespace: FANTOM is_a: UBERON:0005358 ! ventricle of nervous system relationship: part_of UBERON:0005282 ! ventricular system of brain [Term] id: UBERON:0004088 name: ocular region namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster relationship: part_of UBERON:0001456 ! face [Term] id: UBERON:0004089 name: midface namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure relationship: part_of UBERON:0001456 ! face [Term] id: UBERON:0004111 name: anatomical conduit namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster [Term] id: UBERON:0004119 name: endoderm-derived structure namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure [Term] id: UBERON:0004120 name: mesoderm-derived structure namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure intersection_of: UBERON:0000061 ! anatomical structure intersection_of: develops_from UBERON:0000926 ! mesoderm relationship: develops_from UBERON:0000926 ! mesoderm [Term] id: UBERON:0004121 name: ectoderm-derived structure namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure [Term] id: UBERON:0004134 name: proximal tubule namespace: FANTOM is_a: UBERON:0006853 ! renal cortex tubule relationship: part_of UBERON:0001225 ! cortex of kidney relationship: part_of UBERON:0001231 ! nephron tubule [Term] id: UBERON:0004145 name: outflow tract namespace: FANTOM is_a: UBERON:0004111 ! anatomical conduit is_a: UBERON:0004120 ! mesoderm-derived structure relationship: part_of UBERON:0000948 ! heart [Term] id: UBERON:0004151 name: cardiac chamber namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004120 ! mesoderm-derived structure relationship: part_of UBERON:0000948 ! heart [Term] id: UBERON:0004175 name: internal genitalia namespace: FANTOM is_a: UBERON:0003133 ! reproductive organ [Term] id: UBERON:0004176 name: external genitalia namespace: FANTOM is_a: UBERON:0003133 ! reproductive organ [Term] id: UBERON:0004177 name: hemopoietic organ namespace: FANTOM is_a: UBERON:0000062 ! organ is_a: UBERON:0004120 ! mesoderm-derived structure intersection_of: UBERON:0000062 ! organ intersection_of: part_of UBERON:0002390 ! hematopoietic system relationship: part_of UBERON:0002390 ! hematopoietic system [Term] id: UBERON:0004178 name: aorta smooth muscle tissue namespace: FANTOM is_a: UBERON:0004237 ! blood vessel smooth muscle is_a: UBERON:0004695 ! arterial system smooth muscle intersection_of: UBERON:0001135 ! smooth muscle tissue intersection_of: part_of UBERON:0000947 ! aorta relationship: part_of UBERON:0000947 ! aorta [Term] id: UBERON:0004185 name: endodermal gut namespace: FANTOM is_a: UBERON:0000481 ! multi-tissue structure is_a: UBERON:0004119 ! endoderm-derived structure relationship: part_of UBERON:0001555 ! digestive tract [Term] id: UBERON:0004211 name: nephron epithelium namespace: FANTOM is_a: UBERON:0004819 ! kidney epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001285 ! nephron relationship: part_of UBERON:0001285 ! nephron [Term] id: UBERON:0004237 name: blood vessel smooth muscle namespace: FANTOM is_a: UBERON:0001135 ! smooth muscle tissue intersection_of: UBERON:0001135 ! smooth muscle tissue intersection_of: part_of UBERON:0001981 ! blood vessel relationship: part_of UBERON:0001981 ! blood vessel [Term] id: UBERON:0004252 name: hindlimb stylopod muscle namespace: FANTOM is_a: UBERON:0001383 ! muscle of leg intersection_of: UBERON:0001630 ! muscle organ intersection_of: part_of UBERON:0000376 ! hindlimb stylopod relationship: part_of UBERON:0000376 ! hindlimb stylopod [Term] id: UBERON:0004256 name: hindlimb zeugopod muscle namespace: FANTOM is_a: UBERON:0001383 ! muscle of leg intersection_of: UBERON:0001630 ! muscle organ intersection_of: part_of UBERON:0003823 ! hindlimb zeugopod relationship: part_of UBERON:0003823 ! hindlimb zeugopod [Term] id: UBERON:0004270 name: lower leg connective tissue namespace: FANTOM is_a: UBERON:0003569 ! leg connective tissue intersection_of: UBERON:0002384 ! connective tissue intersection_of: part_of UBERON:0003823 ! hindlimb zeugopod relationship: part_of UBERON:0003823 ! hindlimb zeugopod [Term] id: UBERON:0004277 name: eye muscle namespace: FANTOM is_a: UBERON:0002376 ! muscle of head is_a: UBERON:0004121 ! ectoderm-derived structure intersection_of: UBERON:0001630 ! muscle organ intersection_of: part_of UBERON:0000019 ! camera-type eye relationship: part_of UBERON:0000019 ! camera-type eye [Term] id: UBERON:0004288 name: skeleton namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster relationship: part_of UBERON:0001434 ! skeletal system [Term] id: UBERON:0004375 name: bone of free limb or fin namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0010740 ! bone of appendage girdle complex intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0004708 ! limb/fin relationship: part_of UBERON:0004708 ! limb/fin relationship: part_of UBERON:0011582 ! limb/fin skeleton [Term] id: UBERON:0004381 name: skeleton of limb namespace: FANTOM is_a: UBERON:0010712 ! limb skeleton subdivision is_a: UBERON:0011582 ! limb/fin skeleton relationship: part_of UBERON:0002101 ! limb [Term] id: UBERON:0004456 name: entire sense organ system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system [Term] id: UBERON:0004457 name: cavity lining namespace: FANTOM is_a: UBERON:0004458 ! body cavity or lining is_a: UBERON:0004923 ! organ component layer [Term] id: UBERON:0004458 name: body cavity or lining namespace: FANTOM is_a: UBERON:0001062 ! anatomical entity [Term] id: UBERON:0004461 name: musculature of head namespace: FANTOM is_a: UBERON:0008229 ! craniocervical region musculature intersection_of: UBERON:0001015 ! musculature intersection_of: part_of UBERON:0000033 ! head relationship: part_of UBERON:0000033 ! head [Term] id: UBERON:0004529 name: anatomical projection namespace: FANTOM is_a: UBERON:0000063 ! organ segment [Term] id: UBERON:0004535 name: cardiovascular system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system relationship: part_of UBERON:0001009 ! circulatory system [Term] id: UBERON:0004536 name: lymph vasculature namespace: FANTOM is_a: UBERON:0002049 ! vasculature relationship: part_of UBERON:0002465 ! lymphoid system [Term] id: UBERON:0004537 name: blood vasculature namespace: FANTOM is_a: UBERON:0002049 ! vasculature relationship: part_of UBERON:0004535 ! cardiovascular system [Term] id: UBERON:0004571 name: systemic arterial system namespace: FANTOM is_a: UBERON:0007798 ! vascular system relationship: part_of UBERON:0004572 ! arterial system [Term] id: UBERON:0004572 name: arterial system namespace: FANTOM is_a: UBERON:0007798 ! vascular system relationship: part_of UBERON:0004535 ! cardiovascular system [Term] id: UBERON:0004573 name: systemic artery namespace: FANTOM is_a: UBERON:0001637 ! artery intersection_of: UBERON:0001637 ! artery intersection_of: part_of UBERON:0004571 ! systemic arterial system relationship: part_of UBERON:0004571 ! systemic arterial system [Term] id: UBERON:0004582 name: venous system namespace: FANTOM is_a: UBERON:0007798 ! vascular system [Term] id: UBERON:0004638 name: blood vessel endothelium namespace: FANTOM is_a: UBERON:0004852 ! cardiovascular system endothelium intersection_of: UBERON:0001986 ! endothelium intersection_of: part_of UBERON:0001981 ! blood vessel relationship: part_of UBERON:0001981 ! blood vessel [Term] id: UBERON:0004645 name: urinary bladder urothelium namespace: FANTOM is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0000365 ! urothelium is_a: UBERON:0003350 ! epithelium of mucosa is_a: UBERON:0010371 ! ecto-epithelium is_a: UBERON:0012275 ! meso-epithelium intersection_of: UBERON:0000365 ! urothelium intersection_of: part_of UBERON:0001255 ! urinary bladder relationship: part_of UBERON:0001255 ! urinary bladder relationship: part_of UBERON:0001259 ! mucosa of urinary bladder [Term] id: UBERON:0004647 name: liver lobule namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004119 ! endoderm-derived structure relationship: part_of UBERON:0001280 ! liver parenchyma [Term] id: UBERON:0004663 name: aorta wall namespace: FANTOM is_a: UBERON:0000060 ! anatomical wall is_a: UBERON:0004120 ! mesoderm-derived structure intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0000947 ! aorta relationship: part_of UBERON:0000947 ! aorta [Term] id: UBERON:0004664 name: aorta tunica adventitia namespace: FANTOM is_a: UBERON:0005734 ! tunica adventitia of blood vessel intersection_of: UBERON:0005734 ! tunica adventitia of blood vessel intersection_of: part_of UBERON:0000947 ! aorta relationship: part_of UBERON:0000947 ! aorta relationship: part_of UBERON:0004663 ! aorta wall [Term] id: UBERON:0004681 name: vestibular system namespace: FANTOM is_a: UBERON:0001032 ! sensory system [Term] id: UBERON:0004684 name: raphe nuclei namespace: FANTOM is_a: UBERON:0000073 ! regional part of nervous system relationship: part_of UBERON:0002275 ! reticular formation [Term] id: UBERON:0004695 name: arterial system smooth muscle namespace: FANTOM is_a: UBERON:0001135 ! smooth muscle tissue intersection_of: UBERON:0001135 ! smooth muscle tissue intersection_of: part_of UBERON:0004572 ! arterial system relationship: part_of UBERON:0004572 ! arterial system [Term] id: UBERON:0004700 name: arterial system endothelium namespace: FANTOM is_a: UBERON:0004852 ! cardiovascular system endothelium intersection_of: UBERON:0001986 ! endothelium intersection_of: part_of UBERON:0004572 ! arterial system relationship: part_of UBERON:0004572 ! arterial system [Term] id: UBERON:0004708 name: limb/fin namespace: FANTOM is_a: UBERON:0000026 ! appendage intersection_of: UBERON:0000026 ! appendage intersection_of: part_of UBERON:0010707 ! appendage girdle complex relationship: part_of UBERON:0010707 ! appendage girdle complex [Term] id: UBERON:0004709 name: pelvic appendage namespace: FANTOM is_a: UBERON:0004708 ! limb/fin intersection_of: UBERON:0004708 ! limb/fin intersection_of: part_of UBERON:0010709 ! pelvic complex relationship: part_of UBERON:0010709 ! pelvic complex [Term] id: UBERON:0004710 name: pectoral appendage namespace: FANTOM is_a: UBERON:0004708 ! limb/fin intersection_of: UBERON:0004708 ! limb/fin intersection_of: part_of UBERON:0010708 ! pectoral complex relationship: part_of UBERON:0010708 ! pectoral complex [Term] id: UBERON:0004715 name: annulus fibrosus disci intervertebralis namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0006444 ! annulus fibrosus intersection_of: UBERON:0006444 ! annulus fibrosus intersection_of: part_of UBERON:0001066 ! intervertebral disk relationship: part_of UBERON:0001066 ! intervertebral disk [Term] id: UBERON:0004732 name: segmental subdivision of nervous system namespace: FANTOM is_a: UBERON:0000063 ! organ segment is_a: UBERON:0004121 ! ectoderm-derived structure intersection_of: UBERON:0000063 ! organ segment intersection_of: part_of UBERON:0001016 ! nervous system relationship: part_of UBERON:0001016 ! nervous system [Term] id: UBERON:0004733 name: segmental subdivision of hindbrain namespace: FANTOM is_a: UBERON:0004732 ! segmental subdivision of nervous system intersection_of: UBERON:0000063 ! organ segment intersection_of: part_of UBERON:0002028 ! hindbrain relationship: part_of UBERON:0002028 ! hindbrain [Term] id: UBERON:0004755 name: skeletal tissue namespace: FANTOM is_a: UBERON:0002384 ! connective tissue relationship: part_of UBERON:0004765 ! skeletal element [Term] id: UBERON:0004756 name: dermal skeletal element namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0004765 ! skeletal element is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: develops_from UBERON:0002067 ! dermis [Term] id: UBERON:0004765 name: skeletal element namespace: FANTOM is_a: UBERON:0000062 ! organ relationship: part_of UBERON:0001434 ! skeletal system [Term] id: UBERON:0004770 name: articular system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system relationship: part_of UBERON:0001434 ! skeletal system [Term] id: UBERON:0004786 name: gastrointestinal system mucosa namespace: FANTOM is_a: UBERON:0000344 ! mucosa is_a: UBERON:0004119 ! endoderm-derived structure intersection_of: UBERON:0000344 ! mucosa intersection_of: part_of UBERON:0005409 ! gastrointestinal system relationship: part_of UBERON:0001555 ! digestive tract relationship: part_of UBERON:0005409 ! gastrointestinal system [Term] id: UBERON:0004797 name: blood vessel layer namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0004923 ! organ component layer intersection_of: UBERON:0004923 ! organ component layer intersection_of: part_of UBERON:0001981 ! blood vessel relationship: part_of UBERON:0001981 ! blood vessel [Term] id: UBERON:0004801 name: cervix epithelium namespace: FANTOM is_a: UBERON:0006955 ! uterine epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0000002 ! uterine cervix relationship: part_of UBERON:0000002 ! uterine cervix [Term] id: UBERON:0004802 name: respiratory tract epithelium namespace: FANTOM is_a: UBERON:0004807 ! respiratory system epithelium is_a: UBERON:0005911 ! endo-epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0000065 ! respiratory tract relationship: part_of UBERON:0000065 ! respiratory tract relationship: part_of UBERON:0000072 ! segment of respiratory tract [Term] id: UBERON:0004804 name: oviduct epithelium namespace: FANTOM is_a: UBERON:0005156 ! reproductive structure is_a: UBERON:0012275 ! meso-epithelium is_a: UBERON:0014404 ! female anatomical structure intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0000993 ! oviduct relationship: part_of UBERON:0000993 ! oviduct relationship: part_of UBERON:0003889 ! fallopian tube [Term] id: UBERON:0004807 name: respiratory system epithelium namespace: FANTOM is_a: UBERON:0000483 ! epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001004 ! respiratory system relationship: part_of UBERON:0001004 ! respiratory system [Term] id: UBERON:0004808 name: gastrointestinal system epithelium namespace: FANTOM is_a: UBERON:0000483 ! epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0005409 ! gastrointestinal system relationship: part_of UBERON:0005409 ! gastrointestinal system [Term] id: UBERON:0004809 name: salivary gland epithelium namespace: FANTOM is_a: UBERON:0003929 ! gut epithelium is_a: UBERON:0010371 ! ecto-epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001044 ! salivary gland relationship: part_of UBERON:0001044 ! salivary gland [Term] id: UBERON:0004810 name: nephron tubule epithelium namespace: FANTOM is_a: UBERON:0004211 ! nephron epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001231 ! nephron tubule relationship: part_of UBERON:0001231 ! nephron tubule [Term] id: UBERON:0004813 name: seminiferous tubule epithelium namespace: FANTOM is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0001136 ! mesothelium is_a: UBERON:0004910 ! epithelium of male gonad is_a: UBERON:0005911 ! endo-epithelium is_a: UBERON:0010371 ! ecto-epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001343 ! seminiferous tubule of testis relationship: part_of UBERON:0001343 ! seminiferous tubule of testis [Term] id: UBERON:0004815 name: lower respiratory tract epithelium namespace: FANTOM is_a: UBERON:0004802 ! respiratory tract epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001558 ! lower respiratory tract relationship: part_of UBERON:0001558 ! lower respiratory tract [Term] id: UBERON:0004819 name: kidney epithelium namespace: FANTOM is_a: UBERON:0000483 ! epithelium is_a: UBERON:0006554 ! urinary system structure intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0002113 ! kidney relationship: part_of UBERON:0002113 ! kidney [Term] id: UBERON:0004821 name: pulmonary alveolus epithelium namespace: FANTOM is_a: UBERON:0000115 ! lung epithelium is_a: UBERON:0000487 ! simple squamous epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0002299 ! alveolus of lung relationship: part_of UBERON:0002299 ! alveolus of lung relationship: part_of UBERON:0004894 ! alveolar wall [Term] id: UBERON:0004852 name: cardiovascular system endothelium namespace: FANTOM is_a: UBERON:0001986 ! endothelium intersection_of: UBERON:0001986 ! endothelium intersection_of: part_of UBERON:0004535 ! cardiovascular system relationship: part_of UBERON:0004535 ! cardiovascular system [Term] id: UBERON:0004882 name: eponychium namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0004923 ! organ component layer relationship: part_of UBERON:0001003 ! epidermis [Term] id: UBERON:0004894 name: alveolar wall namespace: FANTOM is_a: UBERON:0000060 ! anatomical wall is_a: UBERON:0004119 ! endoderm-derived structure intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0002299 ! alveolus of lung relationship: part_of UBERON:0002299 ! alveolus of lung [Term] id: UBERON:0004903 name: bronchoalveolar duct junction namespace: FANTOM is_a: UBERON:0007651 ! anatomical junction [Term] id: UBERON:0004904 name: nerve connecting eye with brain namespace: FANTOM is_a: UBERON:0001021 ! nerve relationship: part_of UBERON:0002104 ! visual system [Term] id: UBERON:0004905 name: articulation namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster [Term] id: UBERON:0004906 name: ectodermal gut namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0004185 ! endodermal gut relationship: part_of UBERON:0001555 ! digestive tract [Term] id: UBERON:0004907 name: lower digestive tract namespace: FANTOM is_a: UBERON:0004921 ! subdivision of digestive tract relationship: part_of UBERON:0005409 ! gastrointestinal system [Term] id: UBERON:0004909 name: epithelium of gonad namespace: FANTOM is_a: UBERON:0005156 ! reproductive structure is_a: UBERON:0012275 ! meso-epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0000991 ! gonad relationship: part_of UBERON:0000991 ! gonad [Term] id: UBERON:0004910 name: epithelium of male gonad namespace: FANTOM is_a: UBERON:0004909 ! epithelium of gonad is_a: UBERON:0014403 ! male anatomical structure intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0000473 ! testis relationship: part_of UBERON:0000473 ! testis [Term] id: UBERON:0004911 name: epithelium of female gonad namespace: FANTOM is_a: UBERON:0004909 ! epithelium of gonad is_a: UBERON:0014404 ! female anatomical structure intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0000992 ! female gonad relationship: part_of UBERON:0000992 ! female gonad [Term] id: UBERON:0004913 name: hepatopancreatic ampulla namespace: FANTOM is_a: UBERON:0003928 ! digestive system duct is_a: UBERON:0004119 ! endoderm-derived structure intersection_of: UBERON:0000058 ! duct intersection_of: part_of UBERON:0001174 ! common bile duct intersection_of: part_of UBERON:0004914 ! duodenal papilla relationship: part_of UBERON:0001174 ! common bile duct relationship: part_of UBERON:0004914 ! duodenal papilla [Term] id: UBERON:0004914 name: duodenal papilla namespace: FANTOM is_a: UBERON:0000063 ! organ segment is_a: UBERON:0004119 ! endoderm-derived structure relationship: part_of UBERON:0002114 ! duodenum [Term] id: UBERON:0004921 name: subdivision of digestive tract namespace: FANTOM is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0013522 ! subdivision of tube relationship: part_of UBERON:0001555 ! digestive tract [Term] id: UBERON:0004923 name: organ component layer namespace: FANTOM is_a: UBERON:0000064 ! organ part relationship: part_of UBERON:0000060 ! anatomical wall [Term] id: UBERON:0005056 name: external female genitalia namespace: FANTOM is_a: UBERON:0003134 ! female reproductive organ is_a: UBERON:0004176 ! external genitalia intersection_of: UBERON:0004176 ! external genitalia intersection_of: part_of UBERON:0000474 ! female reproductive system relationship: part_of UBERON:0000474 ! female reproductive system [Term] id: UBERON:0005057 name: immune organ namespace: FANTOM is_a: UBERON:0000062 ! organ intersection_of: UBERON:0000062 ! organ intersection_of: part_of UBERON:0002405 ! immune system relationship: part_of UBERON:0002405 ! immune system [Term] id: UBERON:0005058 name: hemolymphoid system gland namespace: FANTOM is_a: UBERON:0002530 ! gland intersection_of: UBERON:0002530 ! gland intersection_of: part_of UBERON:0002193 ! hemolymphoid system relationship: part_of UBERON:0002193 ! hemolymphoid system [Term] id: UBERON:0005090 name: muscle structure namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure [Term] id: UBERON:0005156 name: reproductive structure namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure intersection_of: UBERON:0000061 ! anatomical structure intersection_of: part_of UBERON:0000990 ! reproductive system relationship: part_of UBERON:0000990 ! reproductive system [Term] id: UBERON:0005162 name: multi cell component structure namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster [Term] id: UBERON:0005172 name: abdomen organ namespace: FANTOM is_a: UBERON:0005173 ! abdominal segment organ intersection_of: UBERON:0000062 ! organ intersection_of: part_of UBERON:0000916 ! abdomen relationship: part_of UBERON:0000916 ! abdomen [Term] id: UBERON:0005173 name: abdominal segment organ namespace: FANTOM is_a: UBERON:0005177 ! trunk organ intersection_of: UBERON:0000062 ! organ intersection_of: part_of UBERON:0002417 ! abdominal segment of trunk relationship: part_of UBERON:0002417 ! abdominal segment of trunk [Term] id: UBERON:0005174 name: back organ namespace: FANTOM is_a: UBERON:0000062 ! organ intersection_of: UBERON:0000062 ! organ intersection_of: part_of UBERON:0001137 ! dorsum relationship: part_of UBERON:0001137 ! dorsum [Term] id: UBERON:0005175 name: chest organ namespace: FANTOM is_a: UBERON:0005181 ! thoracic segment organ intersection_of: UBERON:0000062 ! organ intersection_of: part_of UBERON:0001443 ! chest relationship: part_of UBERON:0001443 ! chest [Term] id: UBERON:0005177 name: trunk organ namespace: FANTOM is_a: UBERON:0000062 ! organ intersection_of: UBERON:0000062 ! organ intersection_of: part_of UBERON:0002100 ! trunk relationship: part_of UBERON:0002100 ! trunk [Term] id: UBERON:0005178 name: thoracic cavity organ namespace: FANTOM is_a: UBERON:0000062 ! organ [Term] id: UBERON:0005181 name: thoracic segment organ namespace: FANTOM is_a: UBERON:0005177 ! trunk organ intersection_of: UBERON:0000062 ! organ intersection_of: part_of UBERON:0000915 ! thoracic segment of trunk relationship: part_of UBERON:0000915 ! thoracic segment of trunk [Term] id: UBERON:0005208 name: right atrium valve namespace: FANTOM is_a: UBERON:0003978 ! valve is_a: UBERON:0004120 ! mesoderm-derived structure intersection_of: UBERON:0003978 ! valve intersection_of: part_of UBERON:0002078 ! right cardiac atrium relationship: part_of UBERON:0002078 ! right cardiac atrium [Term] id: UBERON:0005253 name: head mesenchyme namespace: FANTOM is_a: UBERON:0003104 ! mesenchyme relationship: part_of UBERON:0000033 ! head [Term] id: UBERON:0005281 name: ventricular system of central nervous system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001017 ! central nervous system [Term] id: UBERON:0005282 name: ventricular system of brain namespace: FANTOM is_a: UBERON:0000467 ! anatomical system is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0000955 ! brain relationship: part_of UBERON:0005281 ! ventricular system of central nervous system [Term] id: UBERON:0005283 name: tela choroidea namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0004923 ! organ component layer relationship: part_of UBERON:0005358 ! ventricle of nervous system [Term] id: UBERON:0005284 name: brain vasculature namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0006876 ! vasculature of organ intersection_of: UBERON:0002049 ! vasculature intersection_of: part_of UBERON:0000955 ! brain relationship: part_of UBERON:0000955 ! brain [Term] id: UBERON:0005290 name: myelencephalon namespace: FANTOM is_a: UBERON:0004733 ! segmental subdivision of hindbrain is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0002028 ! hindbrain [Term] id: UBERON:0005291 name: embryonic tissue namespace: FANTOM is_a: UBERON:0000479 ! tissue is_a: UBERON:0002050 ! embryonic structure intersection_of: UBERON:0000479 ! tissue intersection_of: part_of UBERON:0000922 ! embryo relationship: part_of UBERON:0000922 ! embryo relationship: part_of UBERON:0002050 ! embryonic structure [Term] id: UBERON:0005340 name: dorsal telencephalic commissure namespace: FANTOM is_a: UBERON:0001020 ! commissure [Term] id: UBERON:0005352 name: spermatic cord namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0005156 ! reproductive structure is_a: UBERON:0014403 ! male anatomical structure relationship: part_of UBERON:0004054 ! internal male genitalia [Term] id: UBERON:0005358 name: ventricle of nervous system namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001016 ! nervous system [Term] id: UBERON:0005366 name: olfactory lobe namespace: FANTOM is_a: UBERON:0002791 ! regional part of telencephalon relationship: part_of UBERON:0001893 ! telencephalon [Term] id: UBERON:0005382 name: dorsal striatum namespace: FANTOM is_a: UBERON:0011300 ! gray matter of telencephalon relationship: part_of UBERON:0002435 ! striatum [Term] id: UBERON:0005383 name: caudate-putamen namespace: FANTOM is_a: UBERON:0002791 ! regional part of telencephalon relationship: part_of UBERON:0005382 ! dorsal striatum [Term] id: UBERON:0005388 name: photoreceptor array namespace: FANTOM is_a: UBERON:0000479 ! tissue relationship: part_of UBERON:0000970 ! eye [Term] id: UBERON:0005389 name: transparent eye structure namespace: FANTOM is_a: UBERON:0000064 ! organ part relationship: part_of UBERON:0000970 ! eye [Term] id: UBERON:0005396 name: carotid artery segment namespace: FANTOM is_a: UBERON:0004573 ! systemic artery [Term] id: UBERON:0005398 name: female reproductive gland namespace: FANTOM is_a: UBERON:0003937 ! sex gland is_a: UBERON:0014404 ! female anatomical structure intersection_of: UBERON:0003937 ! sex gland intersection_of: part_of UBERON:0000474 ! female reproductive system relationship: part_of UBERON:0000474 ! female reproductive system relationship: part_of UBERON:0003134 ! female reproductive organ [Term] id: UBERON:0005399 name: male reproductive gland namespace: FANTOM is_a: UBERON:0003937 ! sex gland is_a: UBERON:0014403 ! male anatomical structure intersection_of: UBERON:0003937 ! sex gland intersection_of: part_of UBERON:0000079 ! male reproductive system relationship: part_of UBERON:0000079 ! male reproductive system [Term] id: UBERON:0005401 name: cerebral grey matter namespace: FANTOM is_a: UBERON:0011300 ! gray matter of telencephalon intersection_of: UBERON:0003528 ! brain grey matter intersection_of: part_of UBERON:0001869 ! cerebral hemisphere relationship: part_of UBERON:0001869 ! cerebral hemisphere [Term] id: UBERON:0005403 name: ventral striatum namespace: FANTOM is_a: UBERON:0011300 ! gray matter of telencephalon relationship: part_of UBERON:0002435 ! striatum [Term] id: UBERON:0005406 name: perirenal fat namespace: FANTOM is_a: UBERON:0001013 ! adipose tissue [Term] id: UBERON:0005408 name: circumventricular organ namespace: FANTOM is_a: UBERON:0002616 ! regional part of brain relationship: part_of UBERON:0000955 ! brain [Term] id: UBERON:0005409 name: gastrointestinal system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system relationship: part_of UBERON:0001007 ! digestive system [Term] id: UBERON:0005423 name: developing anatomical structure namespace: FANTOM is_a: UBERON:0000465 ! material anatomical entity [Term] id: UBERON:0005451 name: segment of manus namespace: FANTOM is_a: UBERON:0008785 ! upper limb segment is_a: UBERON:0012139 ! segment of autopod intersection_of: UBERON:0012139 ! segment of autopod intersection_of: part_of UBERON:0002398 ! manus relationship: part_of UBERON:0002398 ! manus [Term] id: UBERON:0005620 name: primary palate namespace: FANTOM is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0004906 ! ectodermal gut is_a: UBERON:0007375 ! roof of mouth is_a: UBERON:0010313 ! neural crest-derived structure relationship: part_of UBERON:0002244 ! premaxilla [Term] id: UBERON:0005623 name: semi-lunar valve namespace: FANTOM is_a: UBERON:0000946 ! cardial valve [Term] id: UBERON:0005629 name: vascular plexus namespace: FANTOM is_a: UBERON:0002049 ! vasculature relationship: part_of UBERON:0001009 ! circulatory system [Term] id: UBERON:0005631 name: extraembryonic membrane namespace: FANTOM is_a: UBERON:0000158 ! membranous layer is_a: UBERON:0000478 ! extraembryonic structure [Term] id: UBERON:0005705 name: primary palate mesenchyme namespace: FANTOM is_a: UBERON:0000078 ! mixed ectoderm/mesoderm/endoderm-derived structure is_a: UBERON:0003323 ! mesenchyme of upper jaw is_a: UBERON:0006904 ! head mesenchyme from mesoderm is_a: UBERON:0010258 ! mesenchyme from rhombencephalic neural crest intersection_of: UBERON:0003104 ! mesenchyme intersection_of: part_of UBERON:0005620 ! primary palate relationship: part_of UBERON:0005620 ! primary palate [Term] id: UBERON:0005734 name: tunica adventitia of blood vessel namespace: FANTOM is_a: UBERON:0004797 ! blood vessel layer is_a: UBERON:0005742 ! adventitia [Term] id: UBERON:0005742 name: adventitia namespace: FANTOM is_a: UBERON:0004923 ! organ component layer [Term] id: UBERON:0005744 name: bone foramen namespace: FANTOM is_a: UBERON:0004111 ! anatomical conduit intersection_of: UBERON:0004111 ! anatomical conduit intersection_of: part_of UBERON:0001474 ! bone element relationship: part_of UBERON:0001474 ! bone element [Term] id: UBERON:0005795 name: embryonic uterus namespace: FANTOM is_a: UBERON:0002050 ! embryonic structure [Term] id: UBERON:0005800 name: segment of aorta namespace: FANTOM is_a: UBERON:0000063 ! organ segment is_a: UBERON:0004120 ! mesoderm-derived structure relationship: part_of UBERON:0000947 ! aorta [Term] id: UBERON:0005881 name: limb outgrowth namespace: FANTOM is_a: UBERON:0002529 ! limb segment [Term] id: UBERON:0005893 name: leg bone namespace: FANTOM is_a: UBERON:0003464 ! hindlimb bone intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0000978 ! leg relationship: part_of UBERON:0000978 ! leg [Term] id: UBERON:0005904 name: duct of male reproductive system namespace: FANTOM is_a: UBERON:0000058 ! duct is_a: UBERON:0005156 ! reproductive structure is_a: UBERON:0014403 ! male anatomical structure intersection_of: UBERON:0000058 ! duct intersection_of: part_of UBERON:0000079 ! male reproductive system relationship: part_of UBERON:0000079 ! male reproductive system [Term] id: UBERON:0005906 name: serous sac namespace: FANTOM is_a: UBERON:0000062 ! organ [Term] id: UBERON:0005908 name: conjunctival sac namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0005906 ! serous sac relationship: part_of UBERON:0000019 ! camera-type eye relationship: part_of UBERON:0001801 ! anterior segment of eyeball [Term] id: UBERON:0005910 name: transitional epithelium namespace: FANTOM is_a: UBERON:0000486 ! multilaminar epithelium is_a: UBERON:0005911 ! endo-epithelium [Term] id: UBERON:0005911 name: endo-epithelium namespace: FANTOM is_a: UBERON:0000483 ! epithelium is_a: UBERON:0004119 ! endoderm-derived structure [Term] id: UBERON:0005913 name: zone of bone organ namespace: FANTOM is_a: UBERON:0000064 ! organ part relationship: part_of UBERON:0001474 ! bone element [Term] id: UBERON:0005932 name: bulb of hair follicle namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0002073 ! hair follicle [Term] id: UBERON:0005933 name: hair root sheath namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0005932 ! bulb of hair follicle [Term] id: UBERON:0005942 name: hair outer root sheath namespace: FANTOM is_a: UBERON:0005933 ! hair root sheath [Term] id: UBERON:0005946 name: outflow tract of atrium namespace: FANTOM is_a: UBERON:0004145 ! outflow tract intersection_of: UBERON:0004145 ! outflow tract intersection_of: part_of UBERON:0002081 ! cardiac atrium relationship: part_of UBERON:0002081 ! cardiac atrium [Term] id: UBERON:0005965 name: outflow part of right atrium namespace: FANTOM is_a: UBERON:0005946 ! outflow tract of atrium intersection_of: UBERON:0005946 ! outflow tract of atrium intersection_of: part_of UBERON:0002078 ! right cardiac atrium relationship: part_of UBERON:0002078 ! right cardiac atrium [Term] id: UBERON:0005966 name: outflow part of left atrium namespace: FANTOM is_a: UBERON:0005946 ! outflow tract of atrium intersection_of: UBERON:0005946 ! outflow tract of atrium intersection_of: part_of UBERON:0002079 ! left cardiac atrium relationship: part_of UBERON:0002079 ! left cardiac atrium [Term] id: UBERON:0005969 name: reticulum trabeculare namespace: FANTOM is_a: UBERON:0000479 ! tissue is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0000019 ! camera-type eye relationship: part_of UBERON:0003956 ! aqueous drainage system [Term] id: UBERON:0005970 name: brain commissure namespace: FANTOM is_a: UBERON:0001020 ! commissure is_a: UBERON:0007702 ! tract of brain intersection_of: UBERON:0001020 ! commissure intersection_of: part_of UBERON:0000955 ! brain relationship: part_of UBERON:0000955 ! brain [Term] id: UBERON:0005985 name: coronary vessel namespace: FANTOM is_a: UBERON:0000055 ! vessel is_a: UBERON:0004120 ! mesoderm-derived structure intersection_of: UBERON:0000055 ! vessel intersection_of: part_of UBERON:0000948 ! heart relationship: part_of UBERON:0000948 ! heart [Term] id: UBERON:0006003 name: integumentary adnexa namespace: FANTOM is_a: UBERON:0000064 ! organ part relationship: part_of UBERON:0002416 ! integumental system [Term] id: UBERON:0006058 name: multi-limb segment region namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster [Term] id: UBERON:0006311 name: chamber of eyeball namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0000019 ! camera-type eye [Term] id: UBERON:0006312 name: ocular refractive media namespace: FANTOM is_a: UBERON:0000463 ! portion of organism substance relationship: part_of UBERON:0000019 ! camera-type eye [Term] id: UBERON:0006314 name: bodily fluid namespace: FANTOM is_a: UBERON:0000463 ! portion of organism substance [Term] id: UBERON:0006322 name: inferior rectus extraocular muscle namespace: FANTOM is_a: UBERON:0006533 ! rectus extraocular muscle [Term] id: UBERON:0006323 name: superior rectus extraocular muscle namespace: FANTOM is_a: UBERON:0006533 ! rectus extraocular muscle [Term] id: UBERON:0006331 name: brainstem nucleus namespace: FANTOM is_a: UBERON:0002308 ! nucleus of brain intersection_of: UBERON:0002308 ! nucleus of brain intersection_of: part_of UBERON:0002298 ! brainstem relationship: part_of UBERON:0002298 ! brainstem [Term] id: UBERON:0006444 name: annulus fibrosus namespace: FANTOM is_a: UBERON:0001995 ! fibrocartilage [Term] id: UBERON:0006514 name: pallidum namespace: FANTOM is_a: UBERON:0011300 ! gray matter of telencephalon relationship: part_of UBERON:0002420 ! basal ganglion [Term] id: UBERON:0006518 name: right lung lobe namespace: FANTOM is_a: UBERON:0000101 ! lobe of lung intersection_of: UBERON:0000101 ! lobe of lung intersection_of: part_of UBERON:0002167 ! right lung relationship: part_of UBERON:0002167 ! right lung [Term] id: UBERON:0006524 name: alveolar system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system is_a: UBERON:0004119 ! endoderm-derived structure relationship: part_of UBERON:0002048 ! lung [Term] id: UBERON:0006531 name: oculomotor muscle namespace: FANTOM is_a: UBERON:0001601 ! extra-ocular muscle [Term] id: UBERON:0006533 name: rectus extraocular muscle namespace: FANTOM is_a: UBERON:0006531 ! oculomotor muscle [Term] id: UBERON:0006554 name: urinary system structure namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure intersection_of: UBERON:0000061 ! anatomical structure intersection_of: part_of UBERON:0001008 ! excretory system relationship: part_of UBERON:0001008 ! excretory system [Term] id: UBERON:0006555 name: excretory tube namespace: FANTOM is_a: UBERON:0000025 ! tube is_a: UBERON:0006554 ! urinary system structure intersection_of: UBERON:0000025 ! tube intersection_of: part_of UBERON:0001008 ! excretory system relationship: part_of UBERON:0001008 ! excretory system [Term] id: UBERON:0006558 name: lymphatic part of lymphoid system namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster relationship: part_of UBERON:0001009 ! circulatory system relationship: part_of UBERON:0002465 ! lymphoid system relationship: part_of UBERON:0007798 ! vascular system [Term] id: UBERON:0006562 name: pharynx namespace: FANTOM is_a: UBERON:0004921 ! subdivision of digestive tract [Term] id: UBERON:0006585 name: vestibular organ namespace: FANTOM is_a: UBERON:0000062 ! organ intersection_of: UBERON:0000062 ! organ intersection_of: part_of UBERON:0004681 ! vestibular system relationship: part_of UBERON:0004681 ! vestibular system [Term] id: UBERON:0006659 name: cruciate ligament of knee namespace: FANTOM is_a: UBERON:0011088 ! ligament of knee joint relationship: part_of UBERON:0001485 ! knee joint [Term] id: UBERON:0006799 name: glandular epithelium namespace: FANTOM is_a: UBERON:0000483 ! epithelium [Term] id: UBERON:0006853 name: renal cortex tubule namespace: FANTOM is_a: UBERON:0007685 ! region of nephron tubule intersection_of: UBERON:0007685 ! region of nephron tubule intersection_of: part_of UBERON:0001225 ! cortex of kidney relationship: part_of UBERON:0001225 ! cortex of kidney [Term] id: UBERON:0006858 name: adrenal/interrenal gland namespace: FANTOM is_a: UBERON:0002368 ! endocrine gland is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0005172 ! abdomen organ is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0000916 ! abdomen [Term] id: UBERON:0006866 name: terminal part of digestive tract namespace: FANTOM is_a: UBERON:0004921 ! subdivision of digestive tract [Term] id: UBERON:0006868 name: seminal fluid secreting gland namespace: FANTOM is_a: UBERON:0005399 ! male reproductive gland relationship: part_of UBERON:0006947 ! male genital duct [Term] id: UBERON:0006876 name: vasculature of organ namespace: FANTOM is_a: UBERON:0002049 ! vasculature intersection_of: UBERON:0002049 ! vasculature intersection_of: part_of UBERON:0000062 ! organ relationship: part_of UBERON:0000062 ! organ [Term] id: UBERON:0006877 name: vasculature of liver namespace: FANTOM is_a: UBERON:0002201 ! vasculature of trunk is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0006876 ! vasculature of organ intersection_of: UBERON:0002049 ! vasculature intersection_of: part_of UBERON:0002107 ! liver relationship: part_of UBERON:0002107 ! liver [Term] id: UBERON:0006904 name: head mesenchyme from mesoderm namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0005253 ! head mesenchyme intersection_of: UBERON:0005253 ! head mesenchyme intersection_of: develops_from UBERON:0000926 ! mesoderm relationship: develops_from UBERON:0000926 ! mesoderm [Term] id: UBERON:0006914 name: squamous epithelium namespace: FANTOM is_a: UBERON:0000483 ! epithelium [Term] id: UBERON:0006915 name: stratified squamous epithelium namespace: FANTOM is_a: UBERON:0000486 ! multilaminar epithelium is_a: UBERON:0006914 ! squamous epithelium [Term] id: UBERON:0006925 name: digestive gland namespace: FANTOM is_a: UBERON:0002368 ! endocrine gland is_a: UBERON:0013765 ! digestive system organ intersection_of: UBERON:0002368 ! endocrine gland intersection_of: part_of UBERON:0001007 ! digestive system relationship: part_of UBERON:0001007 ! digestive system [Term] id: UBERON:0006947 name: male genital duct namespace: FANTOM is_a: UBERON:0005904 ! duct of male reproductive system relationship: part_of UBERON:0004054 ! internal male genitalia [Term] id: UBERON:0006955 name: uterine epithelium namespace: FANTOM is_a: UBERON:0004804 ! oviduct epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0000995 ! uterus relationship: part_of UBERON:0000995 ! uterus [Term] id: UBERON:0007023 name: adult organism namespace: FANTOM is_a: UBERON:0000468 ! multi-cellular organism [Term] id: UBERON:0007029 name: external covering of organism namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision [Term] id: UBERON:0007037 name: mechanosensory system namespace: FANTOM is_a: UBERON:0001032 ! sensory system [Term] id: UBERON:0007100 name: circulatory organ namespace: FANTOM is_a: UBERON:0003103 ! compound organ relationship: part_of UBERON:0001009 ! circulatory system [Term] id: UBERON:0007190 name: paracentral gyrus namespace: FANTOM is_a: UBERON:0000200 ! gyrus [Term] id: UBERON:0007194 name: vesicular gland namespace: FANTOM is_a: UBERON:0010147 ! male accessory sex gland [Term] id: UBERON:0007195 name: stroma of bone marrow namespace: FANTOM is_a: UBERON:0002384 ! connective tissue is_a: UBERON:0004120 ! mesoderm-derived structure relationship: part_of UBERON:0002371 ! bone marrow [Term] id: UBERON:0007196 name: tracheobronchial tree namespace: FANTOM is_a: UBERON:0000062 ! organ is_a: UBERON:0004119 ! endoderm-derived structure relationship: part_of UBERON:0001558 ! lower respiratory tract [Term] id: UBERON:0007204 name: brachiocephalic vasculature namespace: FANTOM is_a: UBERON:0002049 ! vasculature [Term] id: UBERON:0007213 name: mesenchyme derived from head neural crest namespace: FANTOM is_a: UBERON:0005253 ! head mesenchyme is_a: UBERON:0014387 ! mesenchyme derived from neural crest [Term] id: UBERON:0007245 name: nuclear complex of neuraxis namespace: FANTOM is_a: UBERON:0002020 ! gray matter of neuraxis [Term] id: UBERON:0007273 name: pelvic appendage skeleton namespace: FANTOM is_a: UBERON:0011582 ! limb/fin skeleton relationship: part_of UBERON:0004709 ! pelvic appendage [Term] id: UBERON:0007375 name: roof of mouth namespace: FANTOM is_a: UBERON:0000481 ! multi-tissue structure relationship: part_of UBERON:0000033 ! head [Term] id: UBERON:0007376 name: outer epithelial layer namespace: FANTOM is_a: UBERON:0000483 ! epithelium is_a: UBERON:0003102 ! surface structure [Term] id: UBERON:0007499 name: epithelial sac namespace: FANTOM is_a: UBERON:0003914 ! epithelial tube is_a: UBERON:0009856 ! sac [Term] id: UBERON:0007616 name: layer of synovial tissue namespace: FANTOM is_a: UBERON:0000042 ! serous membrane is_a: UBERON:0002384 ! connective tissue [Term] id: UBERON:0007625 name: pigment epithelium of eye namespace: FANTOM is_a: UBERON:0000483 ! epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0000970 ! eye relationship: part_of UBERON:0000970 ! eye [Term] id: UBERON:0007651 name: anatomical junction namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster [Term] id: UBERON:0007684 name: uriniferous tubule namespace: FANTOM is_a: UBERON:0003914 ! epithelial tube is_a: UBERON:0004819 ! kidney epithelium is_a: UBERON:0006555 ! excretory tube relationship: part_of UBERON:0002113 ! kidney [Term] id: UBERON:0007685 name: region of nephron tubule namespace: FANTOM is_a: UBERON:0001231 ! nephron tubule is_a: UBERON:0004810 ! nephron tubule epithelium relationship: part_of UBERON:0001231 ! nephron tubule [Term] id: UBERON:0007702 name: tract of brain namespace: FANTOM is_a: UBERON:0001018 ! axon tract intersection_of: UBERON:0001018 ! axon tract intersection_of: part_of UBERON:0000955 ! brain relationship: part_of UBERON:0000955 ! brain [Term] id: UBERON:0007771 name: epidermis gland namespace: FANTOM is_a: UBERON:0002419 ! skin gland intersection_of: UBERON:0002530 ! gland intersection_of: part_of UBERON:0001003 ! epidermis relationship: part_of UBERON:0001003 ! epidermis [Term] id: UBERON:0007779 name: transudate namespace: FANTOM is_a: UBERON:0006314 ! bodily fluid [Term] id: UBERON:0007798 name: vascular system namespace: FANTOM is_a: UBERON:0000467 ! anatomical system relationship: part_of UBERON:0004535 ! cardiovascular system [Term] id: UBERON:0007811 name: craniocervical region namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision relationship: part_of UBERON:0000153 ! anterior region of body relationship: part_of UBERON:0013702 ! body proper [Term] id: UBERON:0007842 name: membrane bone namespace: FANTOM is_a: UBERON:0001474 ! bone element [Term] id: UBERON:0007844 name: cartilage element namespace: FANTOM is_a: UBERON:0004765 ! skeletal element [Term] id: UBERON:0007845 name: regular connective tissue namespace: FANTOM is_a: UBERON:0002384 ! connective tissue [Term] id: UBERON:0007846 name: dense regular connective tissue namespace: FANTOM is_a: UBERON:0007845 ! regular connective tissue is_a: UBERON:0011823 ! dense connective tissue [Term] id: UBERON:0007914 name: head or neck bone namespace: FANTOM is_a: UBERON:0001474 ! bone element intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0007811 ! craniocervical region relationship: part_of UBERON:0007811 ! craniocervical region [Term] id: UBERON:0008001 name: irregular bone namespace: FANTOM is_a: UBERON:0001474 ! bone element [Term] id: UBERON:0008193 name: pneumatized bone namespace: FANTOM is_a: UBERON:0008001 ! irregular bone [Term] id: UBERON:0008198 name: nail plate namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001705 ! nail [Term] id: UBERON:0008202 name: bone of hip region namespace: FANTOM is_a: UBERON:0001474 ! bone element [Term] id: UBERON:0008229 name: craniocervical region musculature namespace: FANTOM is_a: UBERON:0001015 ! musculature intersection_of: UBERON:0001015 ! musculature intersection_of: part_of UBERON:0007811 ! craniocervical region relationship: part_of UBERON:0007811 ! craniocervical region [Term] id: UBERON:0008344 name: intestinal villus of ileum namespace: FANTOM is_a: UBERON:0001213 ! intestinal villus intersection_of: UBERON:0001213 ! intestinal villus intersection_of: part_of UBERON:0002116 ! ileum relationship: part_of UBERON:0000331 ! ileal mucosa relationship: part_of UBERON:0002116 ! ileum [Term] id: UBERON:0008345 name: ileal epithelium namespace: FANTOM is_a: UBERON:0013636 ! epithelium of intestinal villus intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0002116 ! ileum relationship: part_of UBERON:0002116 ! ileum relationship: part_of UBERON:0008344 ! intestinal villus of ileum [Term] id: UBERON:0008784 name: lower limb segment namespace: FANTOM is_a: UBERON:0002529 ! limb segment intersection_of: UBERON:0002529 ! limb segment intersection_of: part_of UBERON:0002103 ! hindlimb relationship: part_of UBERON:0002103 ! hindlimb [Term] id: UBERON:0008785 name: upper limb segment namespace: FANTOM is_a: UBERON:0002529 ! limb segment intersection_of: UBERON:0002529 ! limb segment intersection_of: part_of UBERON:0002102 ! forelimb relationship: part_of UBERON:0002102 ! forelimb [Term] id: UBERON:0008811 name: intromittent organ namespace: FANTOM is_a: UBERON:0003135 ! male reproductive organ relationship: part_of UBERON:0000079 ! male reproductive system [Term] id: UBERON:0008837 name: palmar/plantar part of autopod namespace: FANTOM is_a: UBERON:0002529 ! limb segment relationship: part_of UBERON:0002470 ! autopod region [Term] id: UBERON:0008846 name: skeletal ligament namespace: FANTOM is_a: UBERON:0000211 ! ligament relationship: part_of UBERON:0001434 ! skeletal system [Term] id: UBERON:0008874 name: pulmonary acinus namespace: FANTOM is_a: UBERON:0010368 ! pulmonary lobule relationship: part_of UBERON:0002048 ! lung [Term] id: UBERON:0008878 name: palmar part of manus namespace: FANTOM is_a: UBERON:0005451 ! segment of manus is_a: UBERON:0008837 ! palmar/plantar part of autopod [Term] id: UBERON:0008886 name: pulmonary vascular system namespace: FANTOM is_a: UBERON:0007798 ! vascular system relationship: part_of UBERON:0004535 ! cardiovascular system [Term] id: UBERON:0008907 name: dermal bone namespace: FANTOM is_a: UBERON:0004756 ! dermal skeletal element is_a: UBERON:0007842 ! membrane bone intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0010364 ! dermal skeleton relationship: part_of UBERON:0010364 ! dermal skeleton [Term] id: UBERON:0008949 name: lower lobe of lung namespace: FANTOM is_a: UBERON:0000101 ! lobe of lung [Term] id: UBERON:0008987 name: renal parenchyma namespace: FANTOM is_a: UBERON:0000353 ! parenchyma is_a: UBERON:0006554 ! urinary system structure intersection_of: UBERON:0000353 ! parenchyma intersection_of: part_of UBERON:0002113 ! kidney relationship: part_of UBERON:0002113 ! kidney [Term] id: UBERON:0009113 name: thymic region namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision relationship: part_of UBERON:0000153 ! anterior region of body [Term] id: UBERON:0009142 name: entire mesenchyme namespace: FANTOM is_a: UBERON:0000481 ! multi-tissue structure [Term] id: UBERON:0009471 name: dorsum of tongue namespace: FANTOM is_a: UBERON:0000064 ! organ part is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001723 ! tongue [Term] id: UBERON:0009551 name: distal segment of digit namespace: FANTOM is_a: UBERON:0002529 ! limb segment relationship: part_of UBERON:0002544 ! digit [Term] id: UBERON:0009564 name: distal limb integumentary appendage namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0013703 ! integumentary projection relationship: part_of UBERON:0001003 ! epidermis relationship: part_of UBERON:0009551 ! distal segment of digit [Term] id: UBERON:0009569 name: subdivision of trunk namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision relationship: part_of UBERON:0002100 ! trunk [Term] id: UBERON:0009661 name: midbrain nucleus namespace: FANTOM is_a: UBERON:0002308 ! nucleus of brain is_a: UBERON:0002950 ! regional part of midbrain intersection_of: UBERON:0002308 ! nucleus of brain intersection_of: part_of UBERON:0001891 ! midbrain relationship: part_of UBERON:0001891 ! midbrain [Term] id: UBERON:0009662 name: hindbrain nucleus namespace: FANTOM is_a: UBERON:0002308 ! nucleus of brain intersection_of: UBERON:0002308 ! nucleus of brain intersection_of: part_of UBERON:0002028 ! hindbrain relationship: part_of UBERON:0002028 ! hindbrain [Term] id: UBERON:0009663 name: telencephalic nucleus namespace: FANTOM is_a: UBERON:0002308 ! nucleus of brain is_a: UBERON:0002791 ! regional part of telencephalon intersection_of: UBERON:0002308 ! nucleus of brain intersection_of: part_of UBERON:0001893 ! telencephalon relationship: part_of UBERON:0001893 ! telencephalon [Term] id: UBERON:0009773 name: renal tubule namespace: FANTOM is_a: UBERON:0003914 ! epithelial tube is_a: UBERON:0006555 ! excretory tube relationship: part_of UBERON:0001008 ! excretory system [Term] id: UBERON:0009842 name: acinus namespace: FANTOM is_a: UBERON:0000064 ! organ part [Term] id: UBERON:0009854 name: digestive tract diverticulum namespace: FANTOM is_a: UBERON:0004921 ! subdivision of digestive tract is_a: UBERON:0009856 ! sac intersection_of: UBERON:0009856 ! sac intersection_of: part_of UBERON:0001555 ! digestive tract relationship: part_of UBERON:0001555 ! digestive tract [Term] id: UBERON:0009856 name: sac namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure [Term] id: UBERON:0009891 name: facial mesenchyme namespace: FANTOM is_a: UBERON:0003104 ! mesenchyme intersection_of: UBERON:0003104 ! mesenchyme intersection_of: part_of UBERON:0001456 ! face relationship: part_of UBERON:0001456 ! face [Term] id: UBERON:0009899 name: pole of cerebral hemisphere namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001869 ! cerebral hemisphere [Term] id: UBERON:0009911 name: lobule namespace: FANTOM is_a: UBERON:0000064 ! organ part [Term] id: UBERON:0010009 name: aggregate regional part of brain namespace: FANTOM is_a: UBERON:0002616 ! regional part of brain [Term] id: UBERON:0010011 name: collection of basal ganglia namespace: FANTOM is_a: UBERON:0002791 ! regional part of telencephalon is_a: UBERON:0010009 ! aggregate regional part of brain relationship: part_of UBERON:0000454 ! cerebral subcortex relationship: part_of UBERON:0001893 ! telencephalon [Term] id: UBERON:0010039 name: food storage organ namespace: FANTOM is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0013765 ! digestive system organ relationship: part_of UBERON:0001555 ! digestive tract relationship: part_of UBERON:0005409 ! gastrointestinal system [Term] id: UBERON:0010047 name: oral gland namespace: FANTOM is_a: UBERON:0002365 ! exocrine gland is_a: UBERON:0003408 ! gland of gut is_a: UBERON:0004121 ! ectoderm-derived structure intersection_of: UBERON:0002530 ! gland intersection_of: part_of UBERON:0000165 ! mouth relationship: part_of UBERON:0000165 ! mouth [Term] id: UBERON:0010077 name: cuboidal epithelium namespace: FANTOM is_a: UBERON:0000483 ! epithelium [Term] id: UBERON:0010133 name: neuroendocrine gland namespace: FANTOM is_a: UBERON:0002368 ! endocrine gland is_a: UBERON:0004121 ! ectoderm-derived structure intersection_of: UBERON:0002368 ! endocrine gland intersection_of: part_of UBERON:0001016 ! nervous system relationship: part_of UBERON:0001016 ! nervous system [Term] id: UBERON:0010134 name: secretory circumventricular organ namespace: FANTOM is_a: UBERON:0005408 ! circumventricular organ is_a: UBERON:0010133 ! neuroendocrine gland [Term] id: UBERON:0010147 name: male accessory sex gland namespace: FANTOM is_a: UBERON:0005399 ! male reproductive gland relationship: part_of UBERON:0000079 ! male reproductive system [Term] id: UBERON:0010191 name: aortic system namespace: FANTOM is_a: UBERON:0000480 ! anatomical group [Term] id: UBERON:0010225 name: thalamic complex namespace: FANTOM is_a: UBERON:0002784 ! regional part of diencephalon relationship: part_of UBERON:0001894 ! diencephalon [Term] id: UBERON:0010230 name: eyeball of camera-type eye namespace: FANTOM is_a: UBERON:0000020 ! sense organ is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0000019 ! camera-type eye [Term] id: UBERON:0010258 name: mesenchyme from rhombencephalic neural crest namespace: FANTOM is_a: UBERON:0007213 ! mesenchyme derived from head neural crest relationship: part_of UBERON:0007213 ! mesenchyme derived from head neural crest [Term] id: UBERON:0010260 name: umbilical blood vessel namespace: FANTOM is_a: UBERON:0001981 ! blood vessel [Term] id: UBERON:0010313 name: neural crest-derived structure namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest [Term] id: UBERON:0010314 name: structure with developmental contribution from neural crest namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure [Term] id: UBERON:0010316 name: germ layer / neural crest namespace: FANTOM is_a: UBERON:0005291 ! embryonic tissue [Term] id: UBERON:0010323 name: cranial skeletal system namespace: FANTOM is_a: UBERON:0000075 ! subdivision of skeletal system relationship: part_of UBERON:0011137 ! axial skeletal system [Term] id: UBERON:0010363 name: endochondral element namespace: FANTOM is_a: UBERON:0004765 ! skeletal element [Term] id: UBERON:0010364 name: dermal skeleton namespace: FANTOM is_a: UBERON:0010912 ! subdivision of skeleton [Term] id: UBERON:0010368 name: pulmonary lobule namespace: FANTOM is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0009911 ! lobule relationship: part_of UBERON:0002048 ! lung [Term] id: UBERON:0010371 name: ecto-epithelium namespace: FANTOM is_a: UBERON:0000483 ! epithelium is_a: UBERON:0004121 ! ectoderm-derived structure [Term] id: UBERON:0010409 name: eye surface namespace: FANTOM is_a: UBERON:0003102 ! surface structure is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0000019 ! camera-type eye [Term] id: UBERON:0010523 name: microcirculatory vessel namespace: FANTOM is_a: UBERON:0000055 ! vessel relationship: part_of UBERON:0002049 ! vasculature [Term] id: UBERON:0010538 name: limb/fin segment namespace: FANTOM is_a: UBERON:0010758 ! subdivision of organism along appendicular axis intersection_of: UBERON:0010758 ! subdivision of organism along appendicular axis intersection_of: part_of UBERON:0004708 ! limb/fin relationship: part_of UBERON:0004708 ! limb/fin [Term] id: UBERON:0010707 name: appendage girdle complex namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision [Term] id: UBERON:0010708 name: pectoral complex namespace: FANTOM is_a: UBERON:0010707 ! appendage girdle complex [Term] id: UBERON:0010709 name: pelvic complex namespace: FANTOM is_a: UBERON:0010707 ! appendage girdle complex [Term] id: UBERON:0010712 name: limb skeleton subdivision namespace: FANTOM is_a: UBERON:0010912 ! subdivision of skeleton intersection_of: UBERON:0010912 ! subdivision of skeleton intersection_of: part_of UBERON:0002101 ! limb relationship: part_of UBERON:0002091 ! appendicular skeleton relationship: part_of UBERON:0002101 ! limb [Term] id: UBERON:0010740 name: bone of appendage girdle complex namespace: FANTOM is_a: UBERON:0001474 ! bone element intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0010707 ! appendage girdle complex relationship: part_of UBERON:0002091 ! appendicular skeleton relationship: part_of UBERON:0010707 ! appendage girdle complex [Term] id: UBERON:0010742 name: bone of pelvic complex namespace: FANTOM is_a: UBERON:0010740 ! bone of appendage girdle complex intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0010709 ! pelvic complex relationship: part_of UBERON:0002091 ! appendicular skeleton relationship: part_of UBERON:0010709 ! pelvic complex [Term] id: UBERON:0010743 name: meningeal cluster namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001017 ! central nervous system [Term] id: UBERON:0010758 name: subdivision of organism along appendicular axis namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision relationship: part_of UBERON:0000026 ! appendage [Term] id: UBERON:0010890 name: pelvic complex muscle namespace: FANTOM is_a: UBERON:0001630 ! muscle organ intersection_of: UBERON:0001630 ! muscle organ intersection_of: part_of UBERON:0010709 ! pelvic complex relationship: part_of UBERON:0010709 ! pelvic complex [Term] id: UBERON:0010912 name: subdivision of skeleton namespace: FANTOM is_a: UBERON:0011216 ! organ system subdivision relationship: part_of UBERON:0000075 ! subdivision of skeletal system relationship: part_of UBERON:0004288 ! skeleton [Term] id: UBERON:0010913 name: vertebral element namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0004765 ! skeletal element relationship: part_of UBERON:0001130 ! vertebral column [Term] id: UBERON:0010959 name: craniocervical muscle namespace: FANTOM is_a: UBERON:0001630 ! muscle organ intersection_of: UBERON:0001630 ! muscle organ intersection_of: part_of UBERON:0007811 ! craniocervical region relationship: part_of UBERON:0007811 ! craniocervical region [Term] id: UBERON:0011060 name: perilymphatic channel namespace: FANTOM is_a: UBERON:0000058 ! duct is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0010314 ! structure with developmental contribution from neural crest relationship: part_of UBERON:0001846 ! internal ear [Term] id: UBERON:0011088 name: ligament of knee joint namespace: FANTOM is_a: UBERON:0003577 ! knee connective tissue is_a: UBERON:0008846 ! skeletal ligament intersection_of: UBERON:0000211 ! ligament intersection_of: part_of UBERON:0001485 ! knee joint relationship: part_of UBERON:0001485 ! knee joint [Term] id: UBERON:0011134 name: nonsynovial joint namespace: FANTOM is_a: UBERON:0000982 ! skeletal joint [Term] id: UBERON:0011135 name: intervertebral cartilage namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0007844 ! cartilage element relationship: part_of UBERON:0001468 ! intervertebral joint [Term] id: UBERON:0011137 name: axial skeletal system namespace: FANTOM is_a: UBERON:0000075 ! subdivision of skeletal system [Term] id: UBERON:0011138 name: post-cranial axial skeletal system namespace: FANTOM is_a: UBERON:0000075 ! subdivision of skeletal system is_a: UBERON:0004120 ! mesoderm-derived structure [Term] id: UBERON:0011139 name: synovial limb joint namespace: FANTOM is_a: UBERON:0002217 ! synovial joint is_a: UBERON:0003657 ! limb joint intersection_of: UBERON:0002217 ! synovial joint intersection_of: part_of UBERON:0002101 ! limb relationship: part_of UBERON:0002101 ! limb [Term] id: UBERON:0011143 name: upper urinary tract namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0006554 ! urinary system structure relationship: part_of UBERON:0001008 ! excretory system [Term] id: UBERON:0011156 name: facial skeleton namespace: FANTOM is_a: UBERON:0010313 ! neural crest-derived structure is_a: UBERON:0011158 ! primary subdivision of skull relationship: part_of UBERON:0001456 ! face [Term] id: UBERON:0011158 name: primary subdivision of skull namespace: FANTOM is_a: UBERON:0000075 ! subdivision of skeletal system relationship: part_of UBERON:0003129 ! skull [Term] id: UBERON:0011159 name: primary subdivision of cranial skeletal system namespace: FANTOM is_a: UBERON:0000075 ! subdivision of skeletal system relationship: part_of UBERON:0010323 ! cranial skeletal system [Term] id: UBERON:0011215 name: cell part cluster of neuraxis namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0005162 ! multi cell component structure intersection_of: UBERON:0005162 ! multi cell component structure intersection_of: part_of UBERON:0001017 ! central nervous system relationship: part_of UBERON:0001017 ! central nervous system [Term] id: UBERON:0011216 name: organ system subdivision namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster relationship: part_of UBERON:0000467 ! anatomical system [Term] id: UBERON:0011249 name: appendicular skeletal system namespace: FANTOM is_a: UBERON:0000075 ! subdivision of skeletal system [Term] id: UBERON:0011299 name: white matter of telencephalon namespace: FANTOM is_a: UBERON:0003544 ! brain white matter is_a: UBERON:0010314 ! structure with developmental contribution from neural crest intersection_of: UBERON:0002316 ! white matter intersection_of: part_of UBERON:0001893 ! telencephalon relationship: part_of UBERON:0001893 ! telencephalon [Term] id: UBERON:0011300 name: gray matter of telencephalon namespace: FANTOM is_a: UBERON:0003528 ! brain grey matter is_a: UBERON:0010314 ! structure with developmental contribution from neural crest intersection_of: UBERON:0002020 ! gray matter of neuraxis intersection_of: part_of UBERON:0001893 ! telencephalon relationship: part_of UBERON:0001893 ! telencephalon [Term] id: UBERON:0011582 name: limb/fin skeleton namespace: FANTOM is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0010912 ! subdivision of skeleton relationship: part_of UBERON:0002091 ! appendicular skeleton relationship: part_of UBERON:0004708 ! limb/fin [Term] id: UBERON:0011595 name: jaw region namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0000165 ! mouth [Term] id: UBERON:0011597 name: bone of upper jaw namespace: FANTOM is_a: UBERON:0012360 ! bone of jaw intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0001709 ! upper jaw region relationship: part_of UBERON:0001709 ! upper jaw region relationship: part_of UBERON:0003277 ! skeleton of upper jaw [Term] id: UBERON:0011676 name: subdivision of organism along main body axis namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision relationship: part_of UBERON:0013701 ! main body axis [Term] id: UBERON:0011820 name: atrioventricular region namespace: FANTOM is_a: UBERON:0000481 ! multi-tissue structure is_a: UBERON:0004120 ! mesoderm-derived structure relationship: part_of UBERON:0000948 ! heart [Term] id: UBERON:0011823 name: dense connective tissue namespace: FANTOM is_a: UBERON:0002384 ! connective tissue [Term] id: UBERON:0011858 name: acinus of exocrine gland namespace: FANTOM is_a: UBERON:0009842 ! acinus intersection_of: UBERON:0009842 ! acinus intersection_of: part_of UBERON:0002365 ! exocrine gland relationship: part_of UBERON:0002365 ! exocrine gland [Term] id: UBERON:0011892 name: anterior uvea namespace: FANTOM is_a: UBERON:0000481 ! multi-tissue structure is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001768 ! uvea relationship: part_of UBERON:0001801 ! anterior segment of eyeball [Term] id: UBERON:0011932 name: pilosebaceous unit namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster relationship: part_of UBERON:0002416 ! integumental system [Term] id: UBERON:0012069 name: epithelium-associated lymphoid tissue namespace: FANTOM is_a: UBERON:0001744 ! lymphoid tissue [Term] id: UBERON:0012139 name: segment of autopod namespace: FANTOM is_a: UBERON:0002529 ! limb segment relationship: part_of UBERON:0002470 ! autopod region [Term] id: UBERON:0012140 name: digitopodium region namespace: FANTOM is_a: UBERON:0012139 ! segment of autopod [Term] id: UBERON:0012168 name: umbilical cord blood namespace: FANTOM is_a: UBERON:0000178 ! blood relationship: part_of UBERON:0000323 ! late embryo [Term] id: UBERON:0012274 name: columnar epithelium namespace: FANTOM is_a: UBERON:0000483 ! epithelium [Term] id: UBERON:0012275 name: meso-epithelium namespace: FANTOM is_a: UBERON:0000483 ! epithelium is_a: UBERON:0004120 ! mesoderm-derived structure intersection_of: UBERON:0000483 ! epithelium intersection_of: develops_from UBERON:0000926 ! mesoderm relationship: develops_from UBERON:0000926 ! mesoderm [Term] id: UBERON:0012344 name: holocrine gland namespace: FANTOM is_a: UBERON:0002530 ! gland [Term] id: UBERON:0012354 name: acropodium region namespace: FANTOM is_a: UBERON:0012139 ! segment of autopod relationship: part_of UBERON:0012140 ! digitopodium region [Term] id: UBERON:0012360 name: bone of jaw namespace: FANTOM is_a: UBERON:0003462 ! facial bone is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0013765 ! digestive system organ intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0011595 ! jaw region relationship: part_of UBERON:0001708 ! jaw skeleton relationship: part_of UBERON:0011595 ! jaw region [Term] id: UBERON:0012361 name: internal anal region namespace: FANTOM is_a: UBERON:0000477 ! anatomical cluster is_a: UBERON:0004119 ! endoderm-derived structure is_a: UBERON:0004121 ! ectoderm-derived structure relationship: part_of UBERON:0001353 ! anal region [Term] id: UBERON:0012429 name: hemopoietic tissue namespace: FANTOM is_a: UBERON:0000479 ! tissue is_a: UBERON:0004120 ! mesoderm-derived structure relationship: part_of UBERON:0002390 ! hematopoietic system [Term] id: UBERON:0012430 name: tunica fibrosa of eyeball namespace: FANTOM is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0004923 ! organ component layer relationship: part_of UBERON:0010230 ! eyeball of camera-type eye [Term] id: UBERON:0012476 name: skeleton of pelvic complex namespace: FANTOM is_a: UBERON:0010912 ! subdivision of skeleton relationship: part_of UBERON:0002091 ! appendicular skeleton relationship: part_of UBERON:0010709 ! pelvic complex [Term] id: UBERON:0013515 name: subdivision of uterine tube namespace: FANTOM is_a: UBERON:0005156 ! reproductive structure is_a: UBERON:0013522 ! subdivision of tube is_a: UBERON:0014404 ! female anatomical structure relationship: part_of UBERON:0000993 ! oviduct [Term] id: UBERON:0013522 name: subdivision of tube namespace: FANTOM is_a: UBERON:0000064 ! organ part relationship: part_of UBERON:0000025 ! tube [Term] id: UBERON:0013636 name: epithelium of intestinal villus namespace: FANTOM is_a: UBERON:0001902 ! epithelium of small intestine intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001213 ! intestinal villus relationship: part_of UBERON:0001213 ! intestinal villus relationship: part_of UBERON:0001902 ! epithelium of small intestine [Term] id: UBERON:0013685 name: foramen of skull namespace: FANTOM is_a: UBERON:0005744 ! bone foramen intersection_of: UBERON:0005744 ! bone foramen intersection_of: part_of UBERON:0003129 ! skull relationship: part_of UBERON:0003129 ! skull [Term] id: UBERON:0013700 name: axial musculature namespace: FANTOM is_a: UBERON:0001015 ! musculature [Term] id: UBERON:0013701 name: main body axis namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision [Term] id: UBERON:0013702 name: body proper namespace: FANTOM is_a: UBERON:0000475 ! organism subdivision relationship: part_of UBERON:0013701 ! main body axis [Term] id: UBERON:0013703 name: integumentary projection namespace: FANTOM is_a: UBERON:0004529 ! anatomical projection is_a: UBERON:0006003 ! integumentary adnexa intersection_of: UBERON:0004529 ! anatomical projection intersection_of: part_of UBERON:0002416 ! integumental system relationship: part_of UBERON:0002416 ! integumental system [Term] id: UBERON:0013765 name: digestive system organ namespace: FANTOM is_a: UBERON:0000062 ! organ intersection_of: UBERON:0000062 ! organ intersection_of: part_of UBERON:0001007 ! digestive system relationship: part_of UBERON:0001007 ! digestive system [Term] id: UBERON:0013768 name: great vessel of heart namespace: FANTOM is_a: UBERON:0001981 ! blood vessel [Term] id: UBERON:0013776 name: skin of palmar/plantar part of autopod namespace: FANTOM is_a: UBERON:0001419 ! skin of limb intersection_of: UBERON:0000014 ! zone of skin intersection_of: part_of UBERON:0008837 ! palmar/plantar part of autopod relationship: part_of UBERON:0008837 ! palmar/plantar part of autopod [Term] id: UBERON:0013777 name: skin of palm of manus namespace: FANTOM is_a: UBERON:0001519 ! skin of manus is_a: UBERON:0013776 ! skin of palmar/plantar part of autopod intersection_of: UBERON:0000014 ! zone of skin intersection_of: part_of UBERON:0008878 ! palmar part of manus relationship: part_of UBERON:0001519 ! skin of manus relationship: part_of UBERON:0008878 ! palmar part of manus [Term] id: UBERON:0014387 name: mesenchyme derived from neural crest namespace: FANTOM is_a: UBERON:0003104 ! mesenchyme is_a: UBERON:0010313 ! neural crest-derived structure [Term] id: UBERON:0014389 name: gustatory papilla of tongue namespace: FANTOM is_a: UBERON:0001726 ! papilla of tongue [Term] id: UBERON:0014398 name: respiratory muscle namespace: FANTOM is_a: UBERON:0001630 ! muscle organ [Term] id: UBERON:0014402 name: sex-specific anatomical structure namespace: FANTOM is_a: UBERON:0000061 ! anatomical structure [Term] id: UBERON:0014403 name: male anatomical structure namespace: FANTOM is_a: UBERON:0014402 ! sex-specific anatomical structure intersection_of: UBERON:0000061 ! anatomical structure intersection_of: part_of UBERON:0003101 ! male organism relationship: part_of UBERON:0003101 ! male organism [Term] id: UBERON:0014404 name: female anatomical structure namespace: FANTOM is_a: UBERON:0014402 ! sex-specific anatomical structure intersection_of: UBERON:0000061 ! anatomical structure intersection_of: part_of UBERON:0003100 ! female organism relationship: part_of UBERON:0003100 ! female organism [Term] id: UBERON:2005260 name: fenestrated capillary namespace: FANTOM is_a: UBERON:0001982 ! capillary is_a: UBERON:0004638 ! blood vessel endothelium [Term] id: UO:0000000 name: unit namespace: FANTOM is_a: IAO:0000030 ! information entity [Term] id: UO:0000031 name: minute namespace: FANTOM is_a: UO:0000149 ! derived time unit [Term] id: UO:0000032 name: hour namespace: FANTOM is_a: UO:0000149 ! derived time unit [Term] id: UO:0000033 name: day namespace: FANTOM is_a: UO:0000149 ! derived time unit [Term] id: UO:0000046 name: derived unit namespace: FANTOM is_a: UO:0000000 ! unit [Term] id: UO:0000149 name: derived time unit namespace: FANTOM is_a: UO:0000046 ! derived unit [Term] id: snap:MaterialEntity name: material_entity namespace: FANTOM [Term] id: snap:Object name: object namespace: FANTOM is_a: snap:MaterialEntity ! material_entity [Typedef] id: derives_from name: derives_from namespace: FANTOM xref: RO:0001000 transitive_over: part_of ! part_of [Typedef] id: develops_from name: develops_from namespace: FANTOM xref: RO:0002202 is_transitive: true transitive_over: part_of ! part_of [Typedef] id: immediate_transformation_of name: immediate_transformation_of namespace: FANTOM xref: http://semanticscience.org/resource/SIO_000658 xref: SIO:000658 [Typedef] id: is_model_for name: is_model_for namespace: FANTOM xref: http://www.ebi.ac.uk/cellline/is_model_for [Typedef] id: part_of name: part_of namespace: FANTOM xref: BFO:0000050 xref: OBO_REL:part_of xref: part_of is_transitive: true