Personal tools

CL:0000075

From FANTOM5_SSTAR

Jump to: navigation, search
Name:columnar/cuboidal epithelial cell
Namespace:FANTOM


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000066(epithelial cell),CL:0002371(somatic cell)



Children


is a:CL:0000067 (ciliated epithelial cell),CL:0000239 (brush border epithelial cell),CL:0000710 (neurecto-epithelial cell),CL:0002224 (lens epithelial cell)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000075 (columnar/cuboidal epithelial cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
6.52e-56FFCP PHASE2:Mm9::chr9:50547790..50547793,+#_8f8c679af7815cd04c707797ad5724c8p@chr9:50547790..50547793, +
6.52e-56FFCP PHASE1:Mm9::chr9:50547790..50547793,+#_8f8c679af7815cd04c707797ad5724c8p@chr9:50547790..50547793, +
1.01e-55FFCP PHASE2:Mm9::chr8:122335239..122335244,+#_7a80e3c37547fcf2ba714f55009e0ff4p@chr8:122335239..122335244, +
1.01e-55FFCP PHASE1:Mm9::chr8:122335239..122335244,+#_7a80e3c37547fcf2ba714f55009e0ff4p@chr8:122335239..122335244, +
1.21e-55FFCP PHASE1:Mm9::chr17:46693370..46693378,+#_76cc84082184e9f474bf9096b58142c9p@chr17:46693370..46693378, +
1.21e-55FFCP PHASE2:Mm9::chr17:46693370..46693378,+#_76cc84082184e9f474bf9096b58142c9p@chr17:46693370..46693378, +
1.12e-51FFCP PHASE1:Hg19::chrX:9707625..9707629,-#_2d7c69f018595c78cc2cf5f760d99484p6@GPR143
1.12e-51FFCP PHASE2:Hg19::chrX:9707625..9707629,-#_2d7c69f018595c78cc2cf5f760d99484p6@GPR143
2.72e-51FFCP PHASE2:Hg19::chr6:10412262..10412271,-#_d36936d5023eab0a1effa65b77a5059ep21@TFAP2A
2.72e-51FFCP PHASE1:Hg19::chr6:10412262..10412271,-#_d36936d5023eab0a1effa65b77a5059ep21@TFAP2A
3.82e-51FFCP PHASE1:Hg19::chr16:89986251..89986268,+#_0c267ee6752b6f64387d0a4716d7413dp@chr16:89986251..89986268, +
3.82e-51FFCP PHASE1:Hg19::chr9:12695585..12695593,+#_0c267ee6752b6f64387d0a4716d7413dp24@TYRP1
3.82e-51FFCP PHASE1:Hg19::chr19:3557867..3557877,-#_0c267ee6752b6f64387d0a4716d7413dp7@MFSD12
3.82e-51FFCP PHASE2:Hg19::chr9:12693291..12693298,+#_0c267ee6752b6f64387d0a4716d7413dp33@TYRP1
3.82e-51FFCP PHASE1:Hg19::chr1:1497497..1497523,-#_0c267ee6752b6f64387d0a4716d7413dp1@AK129493
3.82e-51FFCP PHASE1:Hg19::chr1:154401791..154401807,+#_0c267ee6752b6f64387d0a4716d7413dp11@IL6R
3.82e-51FFCP PHASE2:Hg19::chr1:1497497..1497523,-#_0c267ee6752b6f64387d0a4716d7413dp1@AK129493
3.82e-51FFCP PHASE1:Hg19::chr9:12708978..12708990,+#_0c267ee6752b6f64387d0a4716d7413dp@chr9:12708978..12708990, +
3.82e-51FFCP PHASE2:Hg19::chr9:12708978..12708990,+#_0c267ee6752b6f64387d0a4716d7413dp@chr9:12708978..12708990, +
3.82e-51FFCP PHASE2:Hg19::chr19:3557867..3557877,-#_0c267ee6752b6f64387d0a4716d7413dp7@MFSD12
3.82e-51FFCP PHASE1:Hg19::chr6:4610902..4610913,+#_0c267ee6752b6f64387d0a4716d7413dp1@ENST00000380106
3.82e-51FFCP PHASE1:Hg19::chr9:12708060..12708071,-#_0c267ee6752b6f64387d0a4716d7413dp@chr9:12708060..12708071, -
3.82e-51FFCP PHASE2:Hg19::chr6:4610902..4610913,+#_0c267ee6752b6f64387d0a4716d7413dp1@ENST00000380106
3.82e-51FFCP PHASE2:Hg19::chr16:89986251..89986268,+#_0c267ee6752b6f64387d0a4716d7413dp@chr16:89986251..89986268, +
3.82e-51FFCP PHASE2:Hg19::chr9:12695585..12695593,+#_0c267ee6752b6f64387d0a4716d7413dp24@TYRP1
3.82e-51FFCP PHASE2:Hg19::chr1:154401791..154401807,+#_0c267ee6752b6f64387d0a4716d7413dp11@IL6R
3.82e-51FFCP PHASE1:Hg19::chr9:12693291..12693298,+#_0c267ee6752b6f64387d0a4716d7413dp33@TYRP1
3.82e-51FFCP PHASE2:Hg19::chr9:12709332..12709345,+#_0c267ee6752b6f64387d0a4716d7413dp@chr9:12709332..12709345, +
3.82e-51FFCP PHASE2:Hg19::chr9:12708060..12708071,-#_0c267ee6752b6f64387d0a4716d7413dp@chr9:12708060..12708071, -
3.82e-51FFCP PHASE2:Hg19::chr9:12702367..12702377,+#_0c267ee6752b6f64387d0a4716d7413dp@chr9:12702367..12702377, +
3.82e-51FFCP PHASE1:Hg19::chr9:12702367..12702377,+#_0c267ee6752b6f64387d0a4716d7413dp@chr9:12702367..12702377, +
3.82e-51FFCP PHASE1:Hg19::chr9:12709332..12709345,+#_0c267ee6752b6f64387d0a4716d7413dp@chr9:12709332..12709345, +
4.24e-50FFCP PHASE2:Mm9::chr4:141179191..141179200,+#_a04b3d0d80a140eb4949da586c3f5e6bp@chr4:141179191..141179200, +
4.24e-50FFCP PHASE1:Mm9::chr12:79850576..79850587,-#_a04b3d0d80a140eb4949da586c3f5e6bp@chr12:79850576..79850587, -
4.24e-50FFCP PHASE1:Mm9::chr4:141179191..141179200,+#_a04b3d0d80a140eb4949da586c3f5e6bp@chr4:141179191..141179200, +
4.24e-50FFCP PHASE2:Mm9::chr12:79850576..79850587,-#_a04b3d0d80a140eb4949da586c3f5e6bp@chr12:79850576..79850587, -
5.28e-50FFCP PHASE1:Mm9::chr15:84503292..84503296,+#_2bdb9f5c078362eb27edb1e19663b240p@chr15:84503292..84503296, +
5.28e-50FFCP PHASE2:Mm9::chr12:40668168..40668171,+#_2bdb9f5c078362eb27edb1e19663b240p@chr12:40668168..40668171, +
5.28e-50FFCP PHASE1:Mm9::chr12:40668168..40668171,+#_2bdb9f5c078362eb27edb1e19663b240p@chr12:40668168..40668171, +
5.28e-50FFCP PHASE2:Mm9::chr15:84503292..84503296,+#_2bdb9f5c078362eb27edb1e19663b240p@chr15:84503292..84503296, +
4.72e-48FFCP PHASE2:Hg19::chr17:505227..505267,-#_d64db4b72a36cbe060d316f6148a9147p@chr17:505227..505267, -
4.72e-48FFCP PHASE1:Hg19::chr17:505227..505267,-#_d64db4b72a36cbe060d316f6148a9147p@chr17:505227..505267, -
3.84e-45FFCP PHASE1:Mm9::chr2:33323607..33323635,+#_d8c580e714cdc6d3b894b2f2808cb725p@chr2:33323607..33323635, +
3.84e-45FFCP PHASE2:Mm9::chr2:33323607..33323635,+#_d8c580e714cdc6d3b894b2f2808cb725p@chr2:33323607..33323635, +
6.09e-45FFCP PHASE2:Mm9::chr8:107365938..107365944,+#_88c27d6827dcec7ed328f1ec3d2fca79p@chr8:107365938..107365944, +
6.09e-45FFCP PHASE1:Mm9::chr8:107365938..107365944,+#_88c27d6827dcec7ed328f1ec3d2fca79p@chr8:107365938..107365944, +
7.5e-45FFCP PHASE1:Mm9::chr3:104598813..104598825,+#_501b10c405c83992261294c197a64f2bp@chr3:104598813..104598825, +
7.5e-45FFCP PHASE2:Mm9::chr3:104598813..104598825,+#_501b10c405c83992261294c197a64f2bp@chr3:104598813..104598825, +
8.95e-45FFCP PHASE1:Hg19::chr19:3557918..3557927,-#_721f34ab6be1b86a8c97e27071bb302bp8@MFSD12
8.95e-45FFCP PHASE1:Hg19::chr1:1497528..1497559,-#_721f34ab6be1b86a8c97e27071bb302bp2@AK129493
8.95e-45FFCP PHASE2:Hg19::chr1:1497528..1497559,-#_721f34ab6be1b86a8c97e27071bb302bp2@AK129493
8.95e-45FFCP PHASE2:Hg19::chr19:3557918..3557927,-#_721f34ab6be1b86a8c97e27071bb302bp8@MFSD12
9.22e-45FFCP PHASE1:Mm9::chr8:125098705..125098710,+#_37e2b36a67757434b8da3505f9396483+, p@chr8:125098705..125098710
9.22e-45FFCP PHASE2:Mm9::chr8:125098705..125098710,+#_37e2b36a67757434b8da3505f9396483p@chr8:125098705..125098710, +
9.55e-45FFCP PHASE2:Hg19::chr5:159894810..159894819,+#_e3793db39f495f54f0e647731678590ep12@uc003lyl.3
9.55e-45FFCP PHASE2:Hg19::chr9:12693559..12693562,+#_e3793db39f495f54f0e647731678590ep22@TYRP1
9.55e-45FFCP PHASE1:Hg19::chr9:12708011..12708027,+#_e3793db39f495f54f0e647731678590ep27@TYRP1
9.55e-45FFCP PHASE2:Hg19::chr9:12704349..12704362,+#_e3793db39f495f54f0e647731678590ep@chr9:12704349..12704362, +
9.55e-45FFCP PHASE1:Hg19::chr5:159894810..159894819,+#_e3793db39f495f54f0e647731678590ep12@uc003lyl.3
9.55e-45FFCP PHASE2:Hg19::chr9:12708011..12708027,+#_e3793db39f495f54f0e647731678590ep27@TYRP1
9.55e-45FFCP PHASE1:Hg19::chr9:12693559..12693562,+#_e3793db39f495f54f0e647731678590ep22@TYRP1
9.55e-45FFCP PHASE1:Hg19::chr9:12701182..12701196,+#_e3793db39f495f54f0e647731678590ep19@TYRP1
9.55e-45FFCP PHASE1:Hg19::chr9:12704349..12704362,+#_e3793db39f495f54f0e647731678590ep@chr9:12704349..12704362, +
9.55e-45FFCP PHASE2:Hg19::chr9:12701182..12701196,+#_e3793db39f495f54f0e647731678590ep19@TYRP1
1.02e-44FFCP PHASE2:Hg19::chr9:12704539..12704547,+#_a92b06229cf426885a5e4d113dd78bc5p@chr9:12704539..12704547, +
1.02e-44FFCP PHASE2:Hg19::chr15:28344426..28344431,-#_a92b06229cf426885a5e4d113dd78bc5p2@OCA2
1.02e-44FFCP PHASE1:Hg19::chr15:28344426..28344431,-#_a92b06229cf426885a5e4d113dd78bc5p2@OCA2
1.02e-44FFCP PHASE1:Hg19::chr9:12704539..12704547,+#_a92b06229cf426885a5e4d113dd78bc5p@chr9:12704539..12704547, +
1.09e-44FFCP PHASE1:Hg19::chr9:12695674..12695681,+#_75eac8e08ac8cf8f93886882222fbc11p36@TYRP1
1.09e-44FFCP PHASE2:Hg19::chr9:12695674..12695681,+#_75eac8e08ac8cf8f93886882222fbc11p36@TYRP1
1.16e-44FFCP PHASE2:Hg19::chr12:56351078..56351092,-#_dbfb1f8ddee798d618fe652dcfeb4563p@chr12:56351078..56351092, -
1.16e-44FFCP PHASE1:Hg19::chr12:56351078..56351092,-#_dbfb1f8ddee798d618fe652dcfeb4563-, p@chr12:56351078..56351092
1.3e-44FFCP PHASE1:Mm9::chr5:135465906..135465912,+#_e11e6fdd81c65aceaabe0ae489acb4bap@chr5:135465906..135465912, +
1.3e-44FFCP PHASE2:Mm9::chr5:135465906..135465912,+#_e11e6fdd81c65aceaabe0ae489acb4bap@chr5:135465906..135465912, +
3.91e-44FFCP PHASE1:Mm9::chr9:84127758..84127761,+#_7505d516810ea7a2056f920f22705f8dp@chr9:84127758..84127761, +
3.91e-44FFCP PHASE2:Mm9::chr9:84127758..84127761,+#_7505d516810ea7a2056f920f22705f8dp@chr9:84127758..84127761, +
4.38e-44FFCP PHASE1:Hg19::chr1:1497446..1497455,-#_970822262a9e0fdb2cb7f8613093b7cep4@AK129493
4.38e-44FFCP PHASE2:Hg19::chr19:3557800..3557811,-#_970822262a9e0fdb2cb7f8613093b7cep9@MFSD12
4.38e-44FFCP PHASE2:Hg19::chr22:20878094..20878105,+#_970822262a9e0fdb2cb7f8613093b7cep41@MED15
4.38e-44FFCP PHASE2:Hg19::chr15:28360857..28360860,-#_970822262a9e0fdb2cb7f8613093b7cep@chr15:28360857..28360860, -
4.38e-44FFCP PHASE2:Hg19::chr1:1497446..1497455,-#_970822262a9e0fdb2cb7f8613093b7cep4@AK129493
4.38e-44FFCP PHASE1:Hg19::chr15:28360857..28360860,-#_970822262a9e0fdb2cb7f8613093b7cep@chr15:28360857..28360860, -
4.38e-44FFCP PHASE2:Hg19::chr17:77923816..77923828,-#_970822262a9e0fdb2cb7f8613093b7cep@chr17:77923816..77923828, -
4.38e-44FFCP PHASE2:Hg19::chr15:42694665..42694671,+#_970822262a9e0fdb2cb7f8613093b7cep16@CAPN3
4.38e-44FFCP PHASE2:Hg19::chr17:77925869..77925876,-#_970822262a9e0fdb2cb7f8613093b7cep@chr17:77925869..77925876, -
4.38e-44FFCP PHASE1:Hg19::chr11:48066945..48066951,+#_970822262a9e0fdb2cb7f8613093b7cep@chr11:48066945..48066951, +
4.38e-44FFCP PHASE1:Hg19::chr3:69951861..69951868,+#_970822262a9e0fdb2cb7f8613093b7cep@chr3:69951861..69951868, +
4.38e-44FFCP PHASE1:Hg19::chr9:12701691..12701717,+#_970822262a9e0fdb2cb7f8613093b7cep34@TYRP1
4.38e-44FFCP PHASE2:Hg19::chr11:48066945..48066951,+#_970822262a9e0fdb2cb7f8613093b7cep@chr11:48066945..48066951, +
4.38e-44FFCP PHASE1:Hg19::chr6:4610888..4610895,+#_970822262a9e0fdb2cb7f8613093b7cep2@ENST00000380106
4.38e-44FFCP PHASE2:Hg19::chr6:4610888..4610895,+#_970822262a9e0fdb2cb7f8613093b7cep2@ENST00000380106
4.38e-44FFCP PHASE2:Hg19::chr9:12704666..12704671,+#_970822262a9e0fdb2cb7f8613093b7cep@chr9:12704666..12704671, +
4.38e-44FFCP PHASE1:Hg19::chr11:2920857..2920864,+#_970822262a9e0fdb2cb7f8613093b7cep13@SLC22A18
4.38e-44FFCP PHASE2:Hg19::chr9:12701691..12701717,+#_970822262a9e0fdb2cb7f8613093b7cep34@TYRP1
4.38e-44FFCP PHASE1:Hg19::chr2:128400821..128400830,-#_970822262a9e0fdb2cb7f8613093b7cep39@LIMS2
4.38e-44FFCP PHASE1:Hg19::chr17:77925869..77925876,-#_970822262a9e0fdb2cb7f8613093b7cep@chr17:77925869..77925876, -
4.38e-44FFCP PHASE2:Hg19::chr11:2920857..2920864,+#_970822262a9e0fdb2cb7f8613093b7cep13@SLC22A18
4.38e-44FFCP PHASE1:Hg19::chr15:42694665..42694671,+#_970822262a9e0fdb2cb7f8613093b7cep16@CAPN3
4.38e-44FFCP PHASE2:Hg19::chr3:69951861..69951868,+#_970822262a9e0fdb2cb7f8613093b7cep@chr3:69951861..69951868, +
4.38e-44FFCP PHASE2:Hg19::chr2:128400821..128400830,-#_970822262a9e0fdb2cb7f8613093b7cep39@LIMS2