Personal tools

CL:0000239

From FANTOM5_SSTAR

Jump to: navigation, search
Name:brush border epithelial cell
Namespace:FANTOM


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000075(columnar/cuboidal epithelial cell)



Children


is a:CL:0000584 (enterocyte),CL:0002306 (epithelial cell of proximal tubule)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
  • 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
  • 11676-122H2 (Renal Proximal Tubular Epithelial Cell, donor3)
  • 11848-124I3 (CD326+ enterocyte, pool1)
  • 11849-124I4 (CD326+ enterocyte, pool2)
  • 11850-124I5 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11851-124I6 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2)
  • 11852-124I7 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11853-124I8 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2)

Mouse (Mus musculus)

  • 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
  • 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
  • 11676-122H2 (Renal Proximal Tubular Epithelial Cell, donor3)
  • 11848-124I3 (CD326+ enterocyte, pool1)
  • 11849-124I4 (CD326+ enterocyte, pool2)
  • 11850-124I5 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11851-124I6 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2)
  • 11852-124I7 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11853-124I8 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000239 (brush border epithelial cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
8.98e-131FFCP PHASE1:Hg19::chr5:167718782..167718785,+#_ca1c06ea27800bb72a8a96f68737014bp10@WWC1
8.98e-131FFCP PHASE2:Hg19::chr5:167718782..167718785,+#_ca1c06ea27800bb72a8a96f68737014bp10@WWC1
1.01e-74FFCP PHASE2:Hg19::chr3:149260147..149260154,-#_e3808e8a99a75c1eb9dff6c87f3c848cp39@WWTR1
1.01e-74FFCP PHASE1:Hg19::chr3:149260147..149260154,-#_e3808e8a99a75c1eb9dff6c87f3c848cp39@WWTR1
1.24e-73FFCP PHASE1:Hg19::chr17:46679250..46679298,+#_9e5b69c9b9d2097857d67c4d73fb58ccp1@ENST00000491264
1.24e-73FFCP PHASE2:Hg19::chr17:46679250..46679298,+#_9e5b69c9b9d2097857d67c4d73fb58ccp1@ENST00000491264
2.39e-66FFCP PHASE2:Hg19::chr8:6614884..6614885,+#_19181c50da662c1e01a2e8036c60d92dp@chr8:6614884..6614885, +
2.39e-66FFCP PHASE1:Hg19::chr8:6614884..6614885,+#_19181c50da662c1e01a2e8036c60d92dp@chr8:6614884..6614885, +
2.39e-66FFCP PHASE2:Hg19::chr3:123667850..123667851,+#_19181c50da662c1e01a2e8036c60d92dp@chr3:123667850..123667851, +
2.39e-66FFCP PHASE1:Hg19::chr16:61687533..61687551,-#_19181c50da662c1e01a2e8036c60d92dp@chr16:61687533..61687551, -
2.39e-66FFCP PHASE2:Hg19::chr16:61687533..61687551,-#_19181c50da662c1e01a2e8036c60d92dp@chr16:61687533..61687551, -
2.39e-66FFCP PHASE1:Hg19::chr16:62055187..62055188,+#_19181c50da662c1e01a2e8036c60d92dp@chr16:62055187..62055188, +
2.39e-66FFCP PHASE2:Hg19::chr16:62055187..62055188,+#_19181c50da662c1e01a2e8036c60d92dp@chr16:62055187..62055188, +
2.39e-66FFCP PHASE1:Hg19::chr3:123667850..123667851,+#_19181c50da662c1e01a2e8036c60d92dp@chr3:123667850..123667851, +
3.74e-65FFCP PHASE1:Mm9::chr9:50547790..50547793,+#_32974cd30403c7e75ab1d9959d2c4212p@chr9:50547790..50547793, +
3.74e-65FFCP PHASE2:Mm9::chr9:50547790..50547793,+#_32974cd30403c7e75ab1d9959d2c4212p@chr9:50547790..50547793, +
6.21e-65FFCP PHASE2:Mm9::chr8:122335239..122335244,+#_5f66efdae9240b7a9dd6aab3fb34b551p@chr8:122335239..122335244, +
6.21e-65FFCP PHASE1:Mm9::chr8:122335239..122335244,+#_5f66efdae9240b7a9dd6aab3fb34b551p@chr8:122335239..122335244, +
1.22e-59FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_7830bd5d187be990925d7a0994abed94p4@MEGF11
1.22e-59FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_7830bd5d187be990925d7a0994abed94p4@MEGF11
2.15e-58FFCP PHASE1:Mm9::chr4:141179191..141179200,+#_536bf4c6196c2b487226278a45330f7ap@chr4:141179191..141179200, +
2.15e-58FFCP PHASE2:Mm9::chr12:79850576..79850587,-#_536bf4c6196c2b487226278a45330f7ap@chr12:79850576..79850587, -
2.15e-58FFCP PHASE1:Mm9::chr12:79850576..79850587,-#_536bf4c6196c2b487226278a45330f7ap@chr12:79850576..79850587, -
2.15e-58FFCP PHASE2:Mm9::chr4:141179191..141179200,+#_536bf4c6196c2b487226278a45330f7ap@chr4:141179191..141179200, +
3.91e-58FFCP PHASE1:Mm9::chr12:40668168..40668171,+#_c041230dc0ea753ed754cf62d7729784p@chr12:40668168..40668171, +
3.91e-58FFCP PHASE1:Mm9::chr15:84503292..84503296,+#_c041230dc0ea753ed754cf62d7729784p@chr15:84503292..84503296, +
3.91e-58FFCP PHASE2:Mm9::chr15:84503292..84503296,+#_c041230dc0ea753ed754cf62d7729784p@chr15:84503292..84503296, +
3.91e-58FFCP PHASE2:Mm9::chr12:40668168..40668171,+#_c041230dc0ea753ed754cf62d7729784p@chr12:40668168..40668171, +
3.75e-53FFCP PHASE1:Hg19::chr9:114828174..114828179,+#_1873d4f9e2f6d43112d4cba5d22b76fcp@chr9:114828174..114828179, +
3.75e-53FFCP PHASE2:Hg19::chr9:114828174..114828179,+#_1873d4f9e2f6d43112d4cba5d22b76fcp@chr9:114828174..114828179, +
1.25e-52FFCP PHASE2:Mm9::chr2:33323607..33323635,+#_882df67f46feeb320654654fbc55433ep@chr2:33323607..33323635, +
1.25e-52FFCP PHASE1:Mm9::chr2:33323607..33323635,+#_882df67f46feeb320654654fbc55433ep@chr2:33323607..33323635, +
2.53e-52FFCP PHASE1:Mm9::chr8:107365938..107365944,+#_ea8f49988284e1d58ef9288e1a644f22p@chr8:107365938..107365944, +
2.53e-52FFCP PHASE2:Mm9::chr8:107365938..107365944,+#_ea8f49988284e1d58ef9288e1a644f22p@chr8:107365938..107365944, +
3.23e-52FFCP PHASE1:Mm9::chr3:104598813..104598825,+#_1bf32908795dfedffbc36fd4b1d36a1cp@chr3:104598813..104598825, +
3.23e-52FFCP PHASE2:Mm9::chr3:104598813..104598825,+#_1bf32908795dfedffbc36fd4b1d36a1cp@chr3:104598813..104598825, +
4.11e-52FFCP PHASE2:Mm9::chr8:125098705..125098710,+#_220971e1268557c926a08d6de89c8df5p@chr8:125098705..125098710, +
4.11e-52FFCP PHASE1:Mm9::chr8:125098705..125098710,+#_220971e1268557c926a08d6de89c8df5+, p@chr8:125098705..125098710
5.18e-52FFCP PHASE1:Mm9::chr5:135465906..135465912,+#_2352a518f93d1439287f7d95c520d053p@chr5:135465906..135465912, +
5.18e-52FFCP PHASE2:Mm9::chr5:135465906..135465912,+#_2352a518f93d1439287f7d95c520d053p@chr5:135465906..135465912, +
2.22e-51FFCP PHASE1:Mm9::chr9:84127758..84127761,+#_8905485fafd225ac10329b6f3240bdc3p@chr9:84127758..84127761, +
2.22e-51FFCP PHASE2:Mm9::chr9:84127758..84127761,+#_8905485fafd225ac10329b6f3240bdc3p@chr9:84127758..84127761, +
8.37e-49FFCP PHASE2:Mm9::chr5:64219055..64219063,-#_c3baaa163dbfdd57ddd26cf46ea86eaep@chr5:64219055..64219063, -
8.37e-49FFCP PHASE1:Mm9::chr5:64219055..64219063,-#_c3baaa163dbfdd57ddd26cf46ea86eaep@chr5:64219055..64219063, -
2.57e-48FFCP PHASE1:Mm9::chr15:82182200..82182204,+#_7238df03641018dbf57a433b2ca0ebb9p@chr15:82182200..82182204, +
2.57e-48FFCP PHASE2:Mm9::chr15:82182200..82182204,+#_7238df03641018dbf57a433b2ca0ebb9p@chr15:82182200..82182204, +
4.49e-48FFCP PHASE1:Mm9::chr9:46051244..46051255,+#_08b8b94530b1556693f8411d76dbac6dp@chr9:46051244..46051255, +
4.49e-48FFCP PHASE2:Mm9::chr9:46051244..46051255,+#_08b8b94530b1556693f8411d76dbac6dp@chr9:46051244..46051255, +
5.4e-48FFCP PHASE1:Mm9::chr1:156931282..156931291,-#_702f9c3e3e0e3a2ffde7dc717920e020p@chr1:156931282..156931291, -
5.4e-48FFCP PHASE2:Mm9::chr1:156931282..156931291,-#_702f9c3e3e0e3a2ffde7dc717920e020p@chr1:156931282..156931291, -
6.51e-48FFCP PHASE2:Mm9::chr17:57201412..57201418,-#_09b76f7f3bdb6637943b54a17835781bp@chr17:57201412..57201418, -
6.51e-48FFCP PHASE1:Mm9::chr17:57201412..57201418,-#_09b76f7f3bdb6637943b54a17835781bp@chr17:57201412..57201418, -
1.37e-47FFCP PHASE2:Mm9::chr17:46693370..46693378,+#_2331b45c74500296a1d81d679a25af00p@chr17:46693370..46693378, +
1.37e-47FFCP PHASE1:Mm9::chr17:46693370..46693378,+#_2331b45c74500296a1d81d679a25af00p@chr17:46693370..46693378, +
6.34e-47FFCP PHASE1:Mm9::chr2:24234641..24234644,+#_0af16157491b795d03f689bf9d655971p@chr2:24234641..24234644, +
6.34e-47FFCP PHASE1:Mm9::chr4:142835790..142835793,-#_0af16157491b795d03f689bf9d655971p@chr4:142835790..142835793, -
6.34e-47FFCP PHASE1:Mm9::chr14:26286217..26286232,+#_0af16157491b795d03f689bf9d655971p@chr14:26286217..26286232, +
6.34e-47FFCP PHASE2:Mm9::chr1:13659869..13659873,-#_0af16157491b795d03f689bf9d655971p@chr1:13659869..13659873, -
6.34e-47FFCP PHASE1:Mm9::chr6:137486449..137486455,+#_0af16157491b795d03f689bf9d655971p@chr6:137486449..137486455, +
6.34e-47FFCP PHASE1:Mm9::chr2:76337146..76337155,+#_0af16157491b795d03f689bf9d655971p5@Osbpl6
6.34e-47FFCP PHASE2:Mm9::chr4:142835790..142835793,-#_0af16157491b795d03f689bf9d655971p@chr4:142835790..142835793, -
6.34e-47FFCP PHASE2:Mm9::chr2:76337146..76337155,+#_0af16157491b795d03f689bf9d655971p5@Osbpl6
6.34e-47FFCP PHASE1:Mm9::chr1:13659869..13659873,-#_0af16157491b795d03f689bf9d655971p@chr1:13659869..13659873, -
6.34e-47FFCP PHASE2:Mm9::chr2:24234641..24234644,+#_0af16157491b795d03f689bf9d655971p@chr2:24234641..24234644, +
6.34e-47FFCP PHASE2:Mm9::chr14:26286217..26286232,+#_0af16157491b795d03f689bf9d655971p@chr14:26286217..26286232, +
6.34e-47FFCP PHASE2:Mm9::chr6:137486449..137486455,+#_0af16157491b795d03f689bf9d655971p@chr6:137486449..137486455, +
1.09e-46FFCP PHASE1:Mm9::chr5:136252496..136252506,+#_c360fdb43f24c266ee38ecd61e869433p@chr5:136252496..136252506, +
1.09e-46FFCP PHASE2:Mm9::chr5:136252496..136252506,+#_c360fdb43f24c266ee38ecd61e869433p@chr5:136252496..136252506, +
1.65e-46FFCP PHASE2:Hg19::chr7:140227349..140227360,-#_4409221cb37b8e87a4e48f0f4b6177cep@chr7:140227349..140227360, -
1.65e-46FFCP PHASE1:Hg19::chr7:140227349..140227360,-#_4409221cb37b8e87a4e48f0f4b6177cep@chr7:140227349..140227360, -
6.32e-46FFCP PHASE2:Mm9::chr2:31008686..31008692,-#_2fdb86b8751b86e63464835c87a6716bp@chr2:31008686..31008692, -
6.32e-46FFCP PHASE1:Mm9::chr2:31008686..31008692,-#_2fdb86b8751b86e63464835c87a6716bp@chr2:31008686..31008692, -
6.32e-46FFCP PHASE1:Mm9::chr19:11893526..11893532,+#_2fdb86b8751b86e63464835c87a6716bp@chr19:11893526..11893532, +
6.32e-46FFCP PHASE2:Mm9::chr19:11893526..11893532,+#_2fdb86b8751b86e63464835c87a6716bp@chr19:11893526..11893532, +
7.81e-46FFCP PHASE2:Mm9::chr10:79561288..79561291,-#_c23235d53ede203fb583b1588a848766p@chr10:79561288..79561291, -
7.81e-46FFCP PHASE1:Mm9::chr10:79561288..79561291,-#_c23235d53ede203fb583b1588a848766p@chr10:79561288..79561291, -
1.47e-45FFCP PHASE1:Mm9::chr3:35620179..35620188,+#_8cc1f50eb94e91fc5c8e488a57a5ab95p@chr3:35620179..35620188, +
1.47e-45FFCP PHASE2:Mm9::chr3:35620179..35620188,+#_8cc1f50eb94e91fc5c8e488a57a5ab95p@chr3:35620179..35620188, +
7.81e-45FFCP PHASE1:Hg19::chr6:30890373..30890381,+#_e0b7d2e36956e174f6b2fe8c01b2f3bcp9@VARS2
7.81e-45FFCP PHASE2:Hg19::chr6:30890373..30890381,+#_e0b7d2e36956e174f6b2fe8c01b2f3bcp9@VARS2
1.2e-44FFCP PHASE2:Mm9::chr15:103135874..103135880,+#_3f41308b5a0997514dda8a7a44109a07p@chr15:103135874..103135880, +
1.2e-44FFCP PHASE1:Mm9::chr15:103135874..103135880,+#_3f41308b5a0997514dda8a7a44109a07p@chr15:103135874..103135880, +
1.2e-44FFCP PHASE2:Mm9::chr18:66636209..66636215,-#_3f41308b5a0997514dda8a7a44109a07p@chr18:66636209..66636215, -
1.2e-44FFCP PHASE1:Mm9::chr18:66636209..66636215,-#_3f41308b5a0997514dda8a7a44109a07p@chr18:66636209..66636215, -
1.42e-44FFCP PHASE2:Mm9::chr16:78268076..78268083,-#_3d0fa1bfb34b5c286ee09427763e03e8p@chr16:78268076..78268083, -
1.42e-44FFCP PHASE2:Mm9::chr10:80565428..80565433,+#_3d0fa1bfb34b5c286ee09427763e03e8p@chr10:80565428..80565433, +
1.42e-44FFCP PHASE1:Mm9::chr10:80565428..80565433,+#_3d0fa1bfb34b5c286ee09427763e03e8p@chr10:80565428..80565433, +
1.42e-44FFCP PHASE1:Mm9::chr16:78268076..78268083,-#_3d0fa1bfb34b5c286ee09427763e03e8p@chr16:78268076..78268083, -
5.38e-44FFCP PHASE2:Mm9::chr1:132748706..132748715,+#_4df3da5fbc8b6c04370b60e7df8ac6ccp@chr1:132748706..132748715, +
5.38e-44FFCP PHASE1:Mm9::chr1:132748706..132748715,+#_4df3da5fbc8b6c04370b60e7df8ac6ccp@chr1:132748706..132748715, +
5.58e-44FFCP PHASE1:Mm9::chr2:143738263..143738267,+#_13133b67a856c95cb4502bce7457e9a3+, p@chr2:143738263..143738267
5.58e-44FFCP PHASE2:Mm9::chr2:143738263..143738267,+#_13133b67a856c95cb4502bce7457e9a3p@chr2:143738263..143738267, +
7.05e-43FFCP PHASE2:Mm9::chr3:122215917..122215967,-#_c8fee78098d841c5cb58b0234fab8aefp@chr3:122215917..122215967, -
7.05e-43FFCP PHASE1:Mm9::chr3:122215917..122215967,-#_c8fee78098d841c5cb58b0234fab8aefp@chr3:122215917..122215967, -
2.1e-41FFCP PHASE2:Mm9::chr12:111682896..111682907,+#_5ce7c5036a15734c4df65ec83854673ep@chr12:111682896..111682907, +
2.1e-41FFCP PHASE1:Mm9::chr12:111682896..111682907,+#_5ce7c5036a15734c4df65ec83854673ep@chr12:111682896..111682907, +
2.46e-41FFCP PHASE1:Mm9::chr16:32380022..32380027,+#_f4f6472deb801695f2add4e794710ee9p@chr16:32380022..32380027, +
2.46e-41FFCP PHASE2:Mm9::chr16:32380022..32380027,+#_f4f6472deb801695f2add4e794710ee9p@chr16:32380022..32380027, +
2.88e-41FFCP PHASE1:Mm9::chr7:96869911..96869915,+#_926ff8564e2e28069620fc4e254fecc6p@chr7:96869911..96869915, +
2.88e-41FFCP PHASE2:Mm9::chr7:96869911..96869915,+#_926ff8564e2e28069620fc4e254fecc6p@chr7:96869911..96869915, +