Personal tools

CL:0000575

From FANTOM5_SSTAR

Jump to: navigation, search
Name:corneal epithelial cell
Namespace:FANTOM
Definition:"An epithelial cell of the cornea." [GOC:tfm]
Xrefs:
links:

BTO:0004298

FMA:70551
Synonyms: "epithelial cell of cornea" EXACT [FMA:70551]
Alt_id: CL:1000431


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000076(squamous epithelial cell),CL:0002159(general ecto-epithelial cell)
part_of:UBERON:0000964(cornea)



Children


derives from:FF:0000043 (human corneal epithelial cell sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000575 (corneal epithelial cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.75e-130FFCP PHASE2:Hg19::chr17:39023189..39023197,-#_90bf3da6dacad70b4e649f6de228d926p2@KRT12
1.75e-130FFCP PHASE1:Hg19::chr17:39023189..39023197,-#_90bf3da6dacad70b4e649f6de228d926p2@KRT12
5.22e-79FFCP PHASE2:Hg19::chr12:53189894..53189905,-#_31da7e1eab806ba23a95e8e030629695p1@KRT3
5.22e-79FFCP PHASE1:Hg19::chr12:53189894..53189905,-#_31da7e1eab806ba23a95e8e030629695p1@KRT3
1.45e-66FFCP PHASE1:Hg19::chr22:30144620..30144638,-#_a8aaac293212445649188996bd0c3a4ep7@ZMAT5
1.45e-66FFCP PHASE2:Hg19::chr22:30144620..30144638,-#_a8aaac293212445649188996bd0c3a4ep7@ZMAT5
5.53e-66FFCP PHASE1:Hg19::chr8:124206334..124206344,+#_c7800194a2512c4b482572d2d64cb984+, p@chr8:124206334..124206344
5.53e-66FFCP PHASE2:Hg19::chr8:124206334..124206344,+#_c7800194a2512c4b482572d2d64cb984+, p@chr8:124206334..124206344
3.58e-57FFCP PHASE1:Hg19::chr1:19403546..19403571,-#_5f749558dbc014688ebb267b910ea4dep@chr1:19403546..19403571, -
3.58e-57FFCP PHASE1:Hg19::chr7:1600419..1600429,-#_5f749558dbc014688ebb267b910ea4dep11@TMEM184A
3.58e-57FFCP PHASE2:Hg19::chr7:1600419..1600429,-#_5f749558dbc014688ebb267b910ea4dep11@TMEM184A
3.58e-57FFCP PHASE2:Hg19::chr1:19403546..19403571,-#_5f749558dbc014688ebb267b910ea4dep@chr1:19403546..19403571, -
1.13e-56FFCP PHASE2:Hg19::chr20:43743762..43743770,-#_e184b8476153f343bd1e73373b73c578p3@WFDC5
1.13e-56FFCP PHASE2:Hg19::chr12:48164790..48164808,-#_e184b8476153f343bd1e73373b73c578p16@RAPGEF3
1.13e-56FFCP PHASE1:Hg19::chr12:48164790..48164808,-#_e184b8476153f343bd1e73373b73c578p16@RAPGEF3
1.13e-56FFCP PHASE1:Hg19::chr20:43743762..43743770,-#_e184b8476153f343bd1e73373b73c578p3@WFDC5
1.46e-50FFCP PHASE2:Hg19::chr6:35048829..35048844,+#_c4946595904361e7fcc408ac06827621p@chr6:35048829..35048844, +
1.46e-50FFCP PHASE1:Hg19::chr6:35048829..35048844,+#_c4946595904361e7fcc408ac06827621p@chr6:35048829..35048844, +
2.42e-50FFCP PHASE1:Hg19::chr11:67463189..67463193,-#_be4cbc302928fefb9d03265a2bcf8436p@chr11:67463189..67463193, -
2.42e-50FFCP PHASE2:Hg19::chr11:67463189..67463193,-#_be4cbc302928fefb9d03265a2bcf8436p@chr11:67463189..67463193, -
2.74e-50FFCP PHASE2:Hg19::chr16:3014251..3014254,+#_bf5bdfbd37690b5844031ef976abee5cp3@KREMEN2
2.74e-50FFCP PHASE1:Hg19::chr16:3014251..3014254,+#_bf5bdfbd37690b5844031ef976abee5cp3@KREMEN2
4.52e-50FFCP PHASE1:Hg19::chr16:56368957..56368963,+#_a0addc0f62790f25eb004b4f8f94a4e7p@chr16:56368957..56368963, +
4.52e-50FFCP PHASE2:Hg19::chr16:56368957..56368963,+#_a0addc0f62790f25eb004b4f8f94a4e7p@chr16:56368957..56368963, +
2.98e-44FFCP PHASE1:Hg19::chr12:46897588..46897603,+#_c51c0365e5e72184f582fd10efbff34ep@chr12:46897588..46897603, +
2.98e-44FFCP PHASE2:Hg19::chr12:46897588..46897603,+#_c51c0365e5e72184f582fd10efbff34ep@chr12:46897588..46897603, +
3.72e-44FFCP PHASE1:Hg19::chr13:20934450..20934456,+#_b0dfda0464362ea238cd8926978f8d96p@chr13:20934450..20934456, +
3.72e-44FFCP PHASE2:Hg19::chr13:20934450..20934456,+#_b0dfda0464362ea238cd8926978f8d96p@chr13:20934450..20934456, +
4.65e-44FFCP PHASE2:Hg19::chr19:51538096..51538109,-#_1a21d043fb99f99fc1955bbd18a065c9p5@KLK12
4.65e-44FFCP PHASE1:Hg19::chr19:51538096..51538109,-#_1a21d043fb99f99fc1955bbd18a065c9p5@KLK12
7.33e-41FFCP PHASE1:Hg19::chr10:5529595..5529606,-#_6c6f1c6f9cbd39a7c634f429d2c7702ep@chr10:5529595..5529606, -
7.33e-41FFCP PHASE2:Hg19::chr10:5529595..5529606,-#_6c6f1c6f9cbd39a7c634f429d2c7702ep@chr10:5529595..5529606, -
3.68e-40FFCP PHASE1:Hg19::chr2:131669803..131669810,+#_88cc01231820acd1e92e600b8f445f33p@chr2:131669803..131669810, +
3.68e-40FFCP PHASE2:Hg19::chr2:131669803..131669810,+#_88cc01231820acd1e92e600b8f445f33p@chr2:131669803..131669810, +
4.49e-40FFCP PHASE1:Hg19::chr9:127212697..127212708,+#_37c8c52d93c2c95078562376ec0e9432p@chr9:127212697..127212708, +
4.49e-40FFCP PHASE2:Hg19::chr9:127212697..127212708,+#_37c8c52d93c2c95078562376ec0e9432p@chr9:127212697..127212708, +
6.7e-40FFCP PHASE1:Hg19::chr19:1905001..1905006,+#_777fe8956505c9560a7665b018e5c4e3p11@SCAMP4
6.7e-40FFCP PHASE2:Hg19::chr19:1905001..1905006,+#_777fe8956505c9560a7665b018e5c4e3p11@SCAMP4
9.99e-40FFCP PHASE2:Hg19::chr19:50709335..50709346,+#_d628a1a50c29e0e9b474687ba35e2369p@chr19:50709335..50709346, +
9.99e-40FFCP PHASE2:Hg19::chr15:72490099..72490109,-#_d628a1a50c29e0e9b474687ba35e2369p3@GRAMD2
9.99e-40FFCP PHASE1:Hg19::chr15:72490099..72490109,-#_d628a1a50c29e0e9b474687ba35e2369p3@GRAMD2
9.99e-40FFCP PHASE1:Hg19::chr19:50709335..50709346,+#_d628a1a50c29e0e9b474687ba35e2369p@chr19:50709335..50709346, +
1.18e-36FFCP PHASE2:Hg19::chr19:44306567..44306574,-#_3a12264dfc71f7aac476a4e020b02874p7@LYPD5
1.18e-36FFCP PHASE1:Hg19::chr19:44306567..44306574,-#_3a12264dfc71f7aac476a4e020b02874p7@LYPD5
2.04e-36FFCP PHASE1:Hg19::chr2:28853455..28853476,+#_7878fd37c9ab8a2e9ec12d673fc91e58p@chr2:28853455..28853476, +
2.04e-36FFCP PHASE2:Hg19::chr2:28853455..28853476,+#_7878fd37c9ab8a2e9ec12d673fc91e58p@chr2:28853455..28853476, +
2.45e-36FFCP PHASE1:Hg19::chr19:51538121..51538134,-#_e61e5dfe009f83eddc45b388a6d7dfd9p4@KLK12
2.45e-36FFCP PHASE2:Hg19::chr19:51538121..51538134,-#_e61e5dfe009f83eddc45b388a6d7dfd9p4@KLK12
2.45e-36FFCP PHASE1:Hg19::chr20:42816206..42816211,-#_e61e5dfe009f83eddc45b388a6d7dfd9p8@JPH2
2.45e-36FFCP PHASE2:Hg19::chr20:42816206..42816211,-#_e61e5dfe009f83eddc45b388a6d7dfd9p8@JPH2
5.04e-34FFCP PHASE2:Hg19::chr3:124535316..124535340,+#_d007bdcb0307f034c0d0fce01314a135p@chr3:124535316..124535340, +
5.04e-34FFCP PHASE1:Hg19::chr5:59064162..59064173,-#_d007bdcb0307f034c0d0fce01314a135p72@PDE4D
5.04e-34FFCP PHASE2:Hg19::chr5:59064162..59064173,-#_d007bdcb0307f034c0d0fce01314a135p72@PDE4D
5.04e-34FFCP PHASE1:Hg19::chr3:124535316..124535340,+#_d007bdcb0307f034c0d0fce01314a135p@chr3:124535316..124535340, +
1.64e-33FFCP PHASE1:Hg19::chr11:119039069..119039081,+#_716f9126541edb5b2d67db3a45476441p9@NLRX1
1.64e-33FFCP PHASE2:Hg19::chr11:119039069..119039081,+#_716f9126541edb5b2d67db3a45476441p9@NLRX1
1.0e-31FFCP PHASE2:Hg19::chr12:48164812..48164829,-#_4049485dd66893b4a1ea85789d43dadep14@RAPGEF3
1.0e-31FFCP PHASE1:Hg19::chr12:48164812..48164829,-#_4049485dd66893b4a1ea85789d43dadep14@RAPGEF3
1.6e-31FFCP PHASE2:Hg19::chr2:131669791..131669801,+#_aad76f026133be270bfff9a7729ac214p@chr2:131669791..131669801, +
1.6e-31FFCP PHASE1:Hg19::chr2:131669791..131669801,+#_aad76f026133be270bfff9a7729ac214p@chr2:131669791..131669801, +
2.54e-31FFCP PHASE2:Hg19::chr17:39742822..39742850,+#_d214b896389af88a9ddd11193369b63ep@chr17:39742822..39742850, +
2.54e-31FFCP PHASE1:Hg19::chr17:39742822..39742850,+#_d214b896389af88a9ddd11193369b63ep@chr17:39742822..39742850, +
2.97e-31FFCP PHASE2:Hg19::chr1:3591362..3591369,-#_41a2e9d80109e6fd7057e1d79f95c38cp@chr1:3591362..3591369, -
2.97e-31FFCP PHASE1:Hg19::chr1:3591362..3591369,-#_41a2e9d80109e6fd7057e1d79f95c38cp@chr1:3591362..3591369, -
4.71e-31FFCP PHASE1:Hg19::chr21:38631055..38631068,-#_321e7c6308a108aa3519fb898ea8f2a7p@chr21:38631055..38631068, -
4.71e-31FFCP PHASE2:Hg19::chr21:38631055..38631068,-#_321e7c6308a108aa3519fb898ea8f2a7p@chr21:38631055..38631068, -
5.5e-31FFCP PHASE1:Hg19::chr12:57328113..57328161,-#_c33f9b12986239862fd0bd98acc3983cp2@SDR9C7
5.5e-31FFCP PHASE2:Hg19::chr12:57328113..57328161,-#_c33f9b12986239862fd0bd98acc3983cp2@SDR9C7
7.48e-31FFCP PHASE2:Hg19::chr17:26833250..26833262,+#_dfa83f0d095e4494b3b24b339f7c25b5p2@FOXN1
7.48e-31FFCP PHASE1:Hg19::chr17:26833250..26833262,+#_dfa83f0d095e4494b3b24b339f7c25b5p2@FOXN1
4.49e-30FFCP PHASE2:Hg19::chr1:26498321..26498327,-#_6ef71982b06e3132f19e71c4ca7a321fp1@ENST00000448923
4.49e-30FFCP PHASE1:Hg19::chr1:26498321..26498327,-#_6ef71982b06e3132f19e71c4ca7a321fp1@ENST00000448923
6.02e-30FFCP PHASE2:Hg19::chr17:39743195..39743199,-#_563c590a7bdc0c3a94fdc92c273e9222p8@KRT14
6.02e-30FFCP PHASE1:Hg19::chr17:39743195..39743199,-#_563c590a7bdc0c3a94fdc92c273e9222p8@KRT14
6.99e-29FFCP PHASE1:Hg19::chr19:35609361..35609378,+#_282bc2df1b20c968022f9525db48febdp@chr19:35609361..35609378, +
6.99e-29FFCP PHASE2:Hg19::chr19:35609361..35609378,+#_282bc2df1b20c968022f9525db48febdp@chr19:35609361..35609378, +
9.3e-29FFCP PHASE1:Hg19::chr10:88729123..88729131,-#_55201d3f1e2321c89f6f4e3a4feb1928p2@ENST00000418273
9.3e-29FFCP PHASE2:Hg19::chr10:88729123..88729131,-#_55201d3f1e2321c89f6f4e3a4feb1928p2@ENST00000418273
1.43e-28FFCP PHASE1:Hg19::chr5:147582412..147582423,+#_07d2a01f519f9d09411ede7182bfa0eep9@SPINK6
1.43e-28FFCP PHASE2:Hg19::chr5:147582412..147582423,+#_07d2a01f519f9d09411ede7182bfa0eep9@SPINK6
5.41e-28FFCP PHASE2:Hg19::chr7:2019948..2019961,-#_fb044fd7bddd3e48cd0927ef5ce7e128p@chr7:2019948..2019961, -
5.41e-28FFCP PHASE1:Hg19::chr7:2019948..2019961,-#_fb044fd7bddd3e48cd0927ef5ce7e128p@chr7:2019948..2019961, -
6.2e-28FFCP PHASE1:Hg19::chr1:209601525..209601530,+#_a9512845d98bd5d6b1e91989fe0d739ep@chr1:209601525..209601530, +
6.2e-28FFCP PHASE2:Hg19::chr1:209601525..209601530,+#_a9512845d98bd5d6b1e91989fe0d739ep@chr1:209601525..209601530, +
9.31e-28FFCP PHASE2:Hg19::chr12:52887237..52887248,-#_4c9d3691156c4377e524aea78edb6f91p12@KRT6A
9.31e-28FFCP PHASE1:Hg19::chr12:52887237..52887248,-#_4c9d3691156c4377e524aea78edb6f91p12@KRT6A
1.07e-27FFCP PHASE1:Hg19::chr7:157086249..157086269,-#_d7548db929426f965635135cf115f70bp@chr7:157086249..157086269, -
1.07e-27FFCP PHASE2:Hg19::chr7:157086249..157086269,-#_d7548db929426f965635135cf115f70bp@chr7:157086249..157086269, -
2.39e-27FFCP PHASE1:Hg19::chr5:167182003..167182007,-#_fdc8224e2685916204d43d974cd051d0p@chr5:167182003..167182007, -
2.39e-27FFCP PHASE2:Hg19::chr5:167182003..167182007,-#_fdc8224e2685916204d43d974cd051d0p@chr5:167182003..167182007, -
2.16e-26FFCP PHASE1:Hg19::chr19:18870833..18870850,+#_9f550958cb2dfc496d26e3d8c4b7d874p@chr19:18870833..18870850, +
2.16e-26FFCP PHASE2:Hg19::chr19:18870833..18870850,+#_9f550958cb2dfc496d26e3d8c4b7d874p@chr19:18870833..18870850, +
4.32e-26FFCP PHASE2:Hg19::chr1:153321274..153321283,-#_82f14e5de791a76ba67fc9629336f815p2@PGLYRP4
4.32e-26FFCP PHASE1:Hg19::chr1:153321274..153321283,-#_82f14e5de791a76ba67fc9629336f815p2@PGLYRP4
8.7e-26FFCP PHASE1:Hg19::chr4:160356236..160356245,+#_1cc6901845d0b888b4b3eb6206aee730p@chr4:160356236..160356245, +
8.7e-26FFCP PHASE1:Hg19::chr1:153004879..153004890,+#_1cc6901845d0b888b4b3eb6206aee730p4@SPRR1B
8.7e-26FFCP PHASE2:Hg19::chr4:160356236..160356245,+#_1cc6901845d0b888b4b3eb6206aee730p@chr4:160356236..160356245, +
8.7e-26FFCP PHASE2:Hg19::chr1:153004879..153004890,+#_1cc6901845d0b888b4b3eb6206aee730p4@SPRR1B
9.87e-26FFCP PHASE1:Hg19::chr17:48611940..48611947,+#_415ab76c3452b41a9fd5525d3686570cp5@EPN3
9.87e-26FFCP PHASE2:Hg19::chr17:48611940..48611947,+#_415ab76c3452b41a9fd5525d3686570cp5@EPN3