Personal tools

CL:0000817

From FANTOM5_SSTAR

Jump to: navigation, search
Name:precursor B cell
Namespace:FANTOM
Definition:"A precursor B cell is a B cell with the phenotype CD10-positive." [GO_REF:0000031, GOC:rhs, GOC:tfm]
Xrefs:
links:
BTO:0001133
Synonyms: "pre-B cell" EXACT []


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000236(B cell)
disjoint_from:CL:0000826(pro-B cell)



Children


is a:CL:0000816 (immature B cell),CL:0000955 (pre-B-II cell)
disjoint from:CL:0000785 (mature B cell)
derives from:FF:0100603 (pre-B acute lymphoblastic leukemia cell line sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 10534-107G3 (acute lymphoblastic leukemia (B-ALL) cell line:NALM-6)

Mouse (Mus musculus)

  • 10534-107G3 (acute lymphoblastic leukemia (B-ALL) cell line:NALM-6)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000817 (precursor B cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
8.98e-131FFCP PHASE2:Hg19::chr7:47225965..47225970,-#_eae8735d254daa77b641f1a87ea39066p@chr7:47225965..47225970, -
8.98e-131FFCP PHASE1:Hg19::chr7:47225965..47225970,-#_eae8735d254daa77b641f1a87ea39066p@chr7:47225965..47225970, -
8.98e-131FFCP PHASE2:Hg19::chr2:54855884..54855893,+#_eae8735d254daa77b641f1a87ea39066p@chr2:54855884..54855893, +
8.98e-131FFCP PHASE1:Hg19::chr9:37327677..37327701,+#_eae8735d254daa77b641f1a87ea39066p9@ZCCHC7
8.98e-131FFCP PHASE1:Hg19::chr2:54855884..54855893,+#_eae8735d254daa77b641f1a87ea39066p@chr2:54855884..54855893, +
8.98e-131FFCP PHASE2:Hg19::chr9:37327677..37327701,+#_eae8735d254daa77b641f1a87ea39066p9@ZCCHC7
8.98e-131FFCP PHASE1:Hg19::chr9:37327716..37327725,+#_eae8735d254daa77b641f1a87ea39066p12@ZCCHC7
8.98e-131FFCP PHASE2:Hg19::chr7:47225953..47225964,-#_eae8735d254daa77b641f1a87ea39066-, p@chr7:47225953..47225964
8.98e-131FFCP PHASE1:Hg19::chr7:47225953..47225964,-#_eae8735d254daa77b641f1a87ea39066-, p@chr7:47225953..47225964
8.98e-131FFCP PHASE2:Hg19::chr9:37327716..37327725,+#_eae8735d254daa77b641f1a87ea39066p12@ZCCHC7
6.24e-88FFCP PHASE2:Hg19::chrX:42815602..42815616,-#_b964d6ec0e61ff343c425d2be638de9cp@chrX:42815602..42815616, -
6.24e-88FFCP PHASE1:Hg19::chrX:42815602..42815616,-#_b964d6ec0e61ff343c425d2be638de9cp@chrX:42815602..42815616, -
1.52e-87FFCP PHASE2:Hg19::chr4:144312629..144312638,+#_1191a5d88af5662268f8290275fc8e44p30@GAB1
1.52e-87FFCP PHASE1:Hg19::chr4:144312629..144312638,+#_1191a5d88af5662268f8290275fc8e44p30@GAB1
1.29e-74FFCP PHASE2:Hg19::chr20:52346373..52346376,-#_fa2402e8b88e04fd16200331125eb6d5-, p@chr20:52346373..52346376
1.29e-74FFCP PHASE1:Hg19::chr20:52346373..52346376,-#_fa2402e8b88e04fd16200331125eb6d5p@chr20:52346373..52346376, -
5.84e-74FFCP PHASE1:Hg19::chr20:45891250..45891274,-#_7324083e888d09b59917b2f4f2500114p32@ZMYND8
5.84e-74FFCP PHASE2:Hg19::chr20:45891250..45891274,-#_7324083e888d09b59917b2f4f2500114p32@ZMYND8
7.51e-74FFCP PHASE2:Hg19::chr12:49555310..49555317,+#_0b89b710d65656916caa1ee8810a1626p@chr12:49555310..49555317, +
7.51e-74FFCP PHASE1:Hg19::chr12:49555310..49555317,+#_0b89b710d65656916caa1ee8810a1626p@chr12:49555310..49555317, +
2.39e-66FFCP PHASE2:Hg19::chr4:3881462..3881469,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr4:3881462..3881469, -
2.39e-66FFCP PHASE2:Hg19::chr8:95412143..95412159,-#_30e281f8e698990a741f9f7b0d8cc8abp17@RAD54B
2.39e-66FFCP PHASE2:Hg19::chr6:164466325..164466331,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr6:164466325..164466331, +
2.39e-66FFCP PHASE2:Hg19::chr7:2109002..2109005,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr7:2109002..2109005, -
2.39e-66FFCP PHASE2:Hg19::chrY:14649728..14649734,+#_30e281f8e698990a741f9f7b0d8cc8abp5@SHROOM2P1
2.39e-66FFCP PHASE1:Hg19::chr12:4313331..4313334,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr12:4313331..4313334, +
2.39e-66FFCP PHASE1:Hg19::chr5:157336889..157336907,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr5:157336889..157336907, +
2.39e-66FFCP PHASE2:Hg19::chr1:17349613..17349631,-#_30e281f8e698990a741f9f7b0d8cc8abp8@SDHB
2.39e-66FFCP PHASE1:Hg19::chr6:166581583..166581586,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr6:166581583..166581586, +
2.39e-66FFCP PHASE1:Hg19::chr4:8046897..8046900,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr4:8046897..8046900, +
2.39e-66FFCP PHASE1:Hg19::chr1:17349654..17349690,-#_30e281f8e698990a741f9f7b0d8cc8abp6@SDHB
2.39e-66FFCP PHASE1:Hg19::chr16:19778948..19778952,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr16:19778948..19778952, -
2.39e-66FFCP PHASE2:Hg19::chr10:1610285..1610290,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr10:1610285..1610290, +
2.39e-66FFCP PHASE2:Hg19::chr4:176353908..176353917,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr4:176353908..176353917, -
2.39e-66FFCP PHASE2:Hg19::chr22:48976727..48976745,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr22:48976727..48976745, +
2.39e-66FFCP PHASE1:Hg19::chr17:76471163..76471166,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr17:76471163..76471166, +
2.39e-66FFCP PHASE1:Hg19::chr10:56410468..56410499,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr10:56410468..56410499, -
2.39e-66FFCP PHASE1:Hg19::chr3:168337915..168337930,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr3:168337915..168337930, -
2.39e-66FFCP PHASE1:Hg19::chr12:122462770..122462775,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr12:122462770..122462775, +
2.39e-66FFCP PHASE2:Hg19::chrX:154028053..154028060,-#_30e281f8e698990a741f9f7b0d8cc8abp21@MPP1
2.39e-66FFCP PHASE2:Hg19::chr5:114291872..114291873,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr5:114291872..114291873, +
2.39e-66FFCP PHASE1:Hg19::chr5:114291872..114291873,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr5:114291872..114291873, +
2.39e-66FFCP PHASE1:Hg19::chr4:146411403..146411429,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr4:146411403..146411429, +
2.39e-66FFCP PHASE1:Hg19::chrX:154028053..154028060,-#_30e281f8e698990a741f9f7b0d8cc8abp21@MPP1
2.39e-66FFCP PHASE1:Hg19::chr21:20747453..20747465,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr21:20747453..20747465, -
2.39e-66FFCP PHASE2:Hg19::chr9:97261442..97261444,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr9:97261442..97261444, +
2.39e-66FFCP PHASE2:Hg19::chr5:59829780..59829788,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr5:59829780..59829788, +
2.39e-66FFCP PHASE2:Hg19::chr21:20752389..20752420,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr21:20752389..20752420, -
2.39e-66FFCP PHASE2:Hg19::chr2:77746703..77746711,-#_30e281f8e698990a741f9f7b0d8cc8abp9@LRRTM4
2.39e-66FFCP PHASE1:Hg19::chr2:77746703..77746711,-#_30e281f8e698990a741f9f7b0d8cc8abp9@LRRTM4
2.39e-66FFCP PHASE2:Hg19::chr22:23214117..23214120,+#_30e281f8e698990a741f9f7b0d8cc8abp3@AM184012, p3@AM184013, p3@AM184014, p3@AM184015
2.39e-66FFCP PHASE2:Hg19::chr1:205827116..205827123,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr1:205827116..205827123, +
2.39e-66FFCP PHASE2:Hg19::chr3:168236611..168236612,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr3:168236611..168236612, -
2.39e-66FFCP PHASE2:Hg19::chr14:106829914..106829921,-#_30e281f8e698990a741f9f7b0d8cc8abp1@HM996258, p1@HM996415, p1@HM996438
2.39e-66FFCP PHASE2:Hg19::chr6:39962295..39962305,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr6:39962295..39962305, +
2.39e-66FFCP PHASE2:Hg19::chr6:164466345..164466352,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr6:164466345..164466352, +
2.39e-66FFCP PHASE1:Hg19::chr15:66464730..66464736,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr15:66464730..66464736, -
2.39e-66FFCP PHASE2:Hg19::chr12:122462770..122462775,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr12:122462770..122462775, +
2.39e-66FFCP PHASE2:Hg19::chr1:17349654..17349690,-#_30e281f8e698990a741f9f7b0d8cc8abp6@SDHB
2.39e-66FFCP PHASE1:Hg19::chr6:166581590..166581596,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr6:166581590..166581596, +
2.39e-66FFCP PHASE1:Hg19::chr11:26122006..26122011,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr11:26122006..26122011, -
2.39e-66FFCP PHASE2:Hg19::chr12:4313331..4313334,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr12:4313331..4313334, +
2.39e-66FFCP PHASE1:Hg19::chr4:8046990..8046993,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr4:8046990..8046993, -
2.39e-66FFCP PHASE1:Hg19::chr22:23234780..23234786,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr22:23234780..23234786, +
2.39e-66FFCP PHASE2:Hg19::chr10:1610305..1610313,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr10:1610305..1610313, +
2.39e-66FFCP PHASE2:Hg19::chr21:20867728..20867731,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr21:20867728..20867731, -
2.39e-66FFCP PHASE2:Hg19::chr10:56410468..56410499,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr10:56410468..56410499, -
2.39e-66FFCP PHASE1:Hg19::chr11:130424330..130424335,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr11:130424330..130424335, +
2.39e-66FFCP PHASE1:Hg19::chrX:42727038..42727047,-#_30e281f8e698990a741f9f7b0d8cc8ab-, p@chrX:42727038..42727047
2.39e-66FFCP PHASE1:Hg19::chr1:101853882..101853891,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr1:101853882..101853891, -
2.39e-66FFCP PHASE2:Hg19::chr6:166581265..166581274,-#_30e281f8e698990a741f9f7b0d8cc8abp5@T
2.39e-66FFCP PHASE2:Hg19::chr4:176358284..176358287,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr4:176358284..176358287, -
2.39e-66FFCP PHASE1:Hg19::chr5:88646759..88646764,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr5:88646759..88646764, +
2.39e-66FFCP PHASE2:Hg19::chr17:76471146..76471155,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr17:76471146..76471155, +
2.39e-66FFCP PHASE2:Hg19::chr15:66464730..66464736,-#_30e281f8e698990a741f9f7b0d8cc8ab-, p@chr15:66464730..66464736
2.39e-66FFCP PHASE1:Hg19::chr5:157816902..157816905,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr5:157816902..157816905, -
2.39e-66FFCP PHASE1:Hg19::chr12:40991131..40991149,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr12:40991131..40991149, +
2.39e-66FFCP PHASE1:Hg19::chr21:20752389..20752420,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr21:20752389..20752420, -
2.39e-66FFCP PHASE2:Hg19::chr20:58045621..58045634,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr20:58045621..58045634, +
2.39e-66FFCP PHASE1:Hg19::chr22:23213535..23213539,+#_30e281f8e698990a741f9f7b0d8cc8abp4@IGLV4-3
2.39e-66FFCP PHASE1:Hg19::chr3:6686484..6686491,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr3:6686484..6686491, +
2.39e-66FFCP PHASE2:Hg19::chr21:20752617..20752622,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr21:20752617..20752622, -
2.39e-66FFCP PHASE2:Hg19::chr2:77746775..77746779,-#_30e281f8e698990a741f9f7b0d8cc8abp14@LRRTM4
2.39e-66FFCP PHASE1:Hg19::chrY:14649728..14649734,+#_30e281f8e698990a741f9f7b0d8cc8abp5@SHROOM2P1
2.39e-66FFCP PHASE2:Hg19::chr13:114062339..114062349,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr13:114062339..114062349, -
2.39e-66FFCP PHASE2:Hg19::chr5:88646759..88646764,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr5:88646759..88646764, +
2.39e-66FFCP PHASE1:Hg19::chr6:164466325..164466331,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr6:164466325..164466331, +
2.39e-66FFCP PHASE1:Hg19::chr2:77746775..77746779,-#_30e281f8e698990a741f9f7b0d8cc8abp14@LRRTM4
2.39e-66FFCP PHASE2:Hg19::chr3:168337915..168337930,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr3:168337915..168337930, -
2.39e-66FFCP PHASE2:Hg19::chr17:76475275..76475285,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr17:76475275..76475285, -
2.39e-66FFCP PHASE2:Hg19::chr6:39962337..39962342,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr6:39962337..39962342, +
2.39e-66FFCP PHASE2:Hg19::chr2:18730657..18730670,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr2:18730657..18730670, +
2.39e-66FFCP PHASE2:Hg19::chr6:164466441..164466449,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr6:164466441..164466449, +
2.39e-66FFCP PHASE2:Hg19::chr15:53828219..53828224,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr15:53828219..53828224, -
2.39e-66FFCP PHASE1:Hg19::chr14:53594794..53594799,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr14:53594794..53594799, +
2.39e-66FFCP PHASE1:Hg19::chr14:106829914..106829921,-#_30e281f8e698990a741f9f7b0d8cc8abp1@HM996258, p1@HM996415, p1@HM996438
2.39e-66FFCP PHASE2:Hg19::chr3:79363599..79363606,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr3:79363599..79363606, +
2.39e-66FFCP PHASE1:Hg19::chr21:20867728..20867731,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr21:20867728..20867731, -
2.39e-66FFCP PHASE1:Hg19::chr11:26124040..26124064,-#_30e281f8e698990a741f9f7b0d8cc8abp@chr11:26124040..26124064, -
2.39e-66FFCP PHASE1:Hg19::chr3:19436672..19436686,+#_30e281f8e698990a741f9f7b0d8cc8abp@chr3:19436672..19436686, +