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CL:0000954

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Name:small pre-B-II cell
Namespace:FANTOM
Definition:"A small pre-B-II cell is a pre-B-II cell that is Rag1-positive, Rag2-positive, pre-BCR-negative, and BCR-negative, is not proliferating, and carries a DNA rearrangement of one or more immunoglobulin light chain genes." [GO_REF:0000031, GOC:rhs, GOC:tfm, PMID:9785673]


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000955(pre-B-II cell)



Children


develops from:CL:0000816 (immature B cell)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000954 (small pre-B-II cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr17:76475275..76475285,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr17:76475275..76475285, -
1.55e-98FFCP PHASE2:Hg19::chr2:77746775..77746779,-#_997c583b23c812a0dc17c1a86a7fd21cp14@LRRTM4
1.55e-98FFCP PHASE1:Hg19::chr1:101853882..101853891,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr1:101853882..101853891, -
1.55e-98FFCP PHASE1:Hg19::chr21:20752389..20752420,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr21:20752389..20752420, -
1.55e-98FFCP PHASE2:Hg19::chr12:40991131..40991149,+#_997c583b23c812a0dc17c1a86a7fd21c+, p@chr12:40991131..40991149
1.55e-98FFCP PHASE2:Hg19::chr12:122458855..122458857,+#_997c583b23c812a0dc17c1a86a7fd21cp16@BCL7A
1.55e-98FFCP PHASE1:Hg19::chr12:117256221..117256231,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr12:117256221..117256231, +
1.55e-98FFCP PHASE1:Hg19::chr11:26124040..26124064,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr11:26124040..26124064, -
1.55e-98FFCP PHASE1:Hg19::chr2:77746703..77746711,-#_997c583b23c812a0dc17c1a86a7fd21cp9@LRRTM4
1.55e-98FFCP PHASE2:Hg19::chr5:114291872..114291873,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr5:114291872..114291873, +
1.55e-98FFCP PHASE1:Hg19::chr4:8046897..8046900,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr4:8046897..8046900, +
1.55e-98FFCP PHASE1:Hg19::chr12:122458855..122458857,+#_997c583b23c812a0dc17c1a86a7fd21cp16@BCL7A
1.55e-98FFCP PHASE1:Hg19::chr12:40991131..40991149,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr12:40991131..40991149, +
1.55e-98FFCP PHASE1:Hg19::chr14:106829914..106829921,-#_997c583b23c812a0dc17c1a86a7fd21cp1@HM996258, p1@HM996415, p1@HM996438
1.55e-98FFCP PHASE2:Hg19::chr17:76471163..76471166,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr17:76471163..76471166, +
1.55e-98FFCP PHASE2:Hg19::chr2:77581116..77581120,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr2:77581116..77581120, -
1.55e-98FFCP PHASE1:Hg19::chr21:20867728..20867731,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr21:20867728..20867731, -
1.55e-98FFCP PHASE1:Hg19::chr6:166581590..166581596,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr6:166581590..166581596, +
1.55e-98FFCP PHASE1:Hg19::chr3:168337915..168337930,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr3:168337915..168337930, -
1.55e-98FFCP PHASE2:Hg19::chr22:23234780..23234786,+#_997c583b23c812a0dc17c1a86a7fd21c+, p@chr22:23234780..23234786
1.55e-98FFCP PHASE2:Hg19::chr12:122462770..122462775,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr12:122462770..122462775, +
1.55e-98FFCP PHASE2:Hg19::chr21:20752389..20752420,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr21:20752389..20752420, -
1.55e-98FFCP PHASE1:Hg19::chr6:39962337..39962342,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr6:39962337..39962342, +
1.55e-98FFCP PHASE2:Hg19::chr12:8808206..8808209,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr12:8808206..8808209, -
1.55e-98FFCP PHASE1:Hg19::chr12:122462770..122462775,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr12:122462770..122462775, +
1.55e-98FFCP PHASE2:Hg19::chr5:88646759..88646764,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr5:88646759..88646764, +
1.55e-98FFCP PHASE2:Hg19::chr6:166581590..166581596,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr6:166581590..166581596, +
1.55e-98FFCP PHASE2:Hg19::chr1:101853882..101853891,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr1:101853882..101853891, -
1.55e-98FFCP PHASE2:Hg19::chr3:19436672..19436686,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr3:19436672..19436686, +
1.55e-98FFCP PHASE2:Hg19::chr12:117256221..117256231,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr12:117256221..117256231, +
1.55e-98FFCP PHASE1:Hg19::chr21:20752617..20752622,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr21:20752617..20752622, -
1.55e-98FFCP PHASE2:Hg19::chr4:8046897..8046900,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr4:8046897..8046900, +
1.55e-98FFCP PHASE2:Hg19::chr21:20867728..20867731,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr21:20867728..20867731, -
1.55e-98FFCP PHASE1:Hg19::chr3:19436672..19436686,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr3:19436672..19436686, +
1.55e-98FFCP PHASE2:Hg19::chr1:17349613..17349631,-#_997c583b23c812a0dc17c1a86a7fd21cp8@SDHB
1.55e-98FFCP PHASE1:Hg19::chr3:6686484..6686491,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr3:6686484..6686491, +
1.55e-98FFCP PHASE1:Hg19::chr6:164466325..164466331,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr6:164466325..164466331, +
1.55e-98FFCP PHASE1:Hg19::chr2:77746775..77746779,-#_997c583b23c812a0dc17c1a86a7fd21cp14@LRRTM4
1.55e-98FFCP PHASE1:Hg19::chr1:17349613..17349631,-#_997c583b23c812a0dc17c1a86a7fd21cp8@SDHB
1.55e-98FFCP PHASE1:Hg19::chr4:8046990..8046993,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr4:8046990..8046993, -
1.55e-98FFCP PHASE2:Hg19::chr10:56410468..56410499,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr10:56410468..56410499, -
1.55e-98FFCP PHASE2:Hg19::chr6:164466325..164466331,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr6:164466325..164466331, +
1.55e-98FFCP PHASE1:Hg19::chr4:3881462..3881469,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr4:3881462..3881469, -
1.55e-98FFCP PHASE1:Hg19::chr15:66464730..66464736,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr15:66464730..66464736, -
1.55e-98FFCP PHASE2:Hg19::chr6:39962295..39962305,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr6:39962295..39962305, +
1.55e-98FFCP PHASE1:Hg19::chr5:114291872..114291873,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr5:114291872..114291873, +
1.55e-98FFCP PHASE1:Hg19::chr3:158747347..158747353,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr3:158747347..158747353, +
1.55e-98FFCP PHASE2:Hg19::chr12:40953942..40953946,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr12:40953942..40953946, +
1.55e-98FFCP PHASE2:Hg19::chr21:20752617..20752622,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr21:20752617..20752622, -
1.55e-98FFCP PHASE1:Hg19::chr2:77581116..77581120,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr2:77581116..77581120, -
1.55e-98FFCP PHASE1:Hg19::chr12:40953942..40953946,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr12:40953942..40953946, +
1.55e-98FFCP PHASE2:Hg19::chr3:178947187..178947192,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr3:178947187..178947192, +
1.55e-98FFCP PHASE2:Hg19::chr4:8046990..8046993,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr4:8046990..8046993, -
1.55e-98FFCP PHASE1:Hg19::chr22:23234780..23234786,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr22:23234780..23234786, +
1.55e-98FFCP PHASE2:Hg19::chr1:17349654..17349690,-#_997c583b23c812a0dc17c1a86a7fd21cp6@SDHB
1.55e-98FFCP PHASE1:Hg19::chr6:164466345..164466352,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr6:164466345..164466352, +
1.55e-98FFCP PHASE2:Hg19::chr3:168236611..168236612,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr3:168236611..168236612, -
1.55e-98FFCP PHASE1:Hg19::chr1:17349654..17349690,-#_997c583b23c812a0dc17c1a86a7fd21cp6@SDHB
1.55e-98FFCP PHASE1:Hg19::chr12:8808206..8808209,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr12:8808206..8808209, -
1.55e-98FFCP PHASE2:Hg19::chr3:6686484..6686491,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr3:6686484..6686491, +
1.55e-98FFCP PHASE2:Hg19::chr6:164466345..164466352,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr6:164466345..164466352, +
1.55e-98FFCP PHASE2:Hg19::chr4:176353908..176353917,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr4:176353908..176353917, -
1.55e-98FFCP PHASE2:Hg19::chr6:39962337..39962342,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr6:39962337..39962342, +
1.55e-98FFCP PHASE2:Hg19::chr11:26122006..26122011,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr11:26122006..26122011, -
1.55e-98FFCP PHASE1:Hg19::chr6:166581265..166581274,-#_997c583b23c812a0dc17c1a86a7fd21cp5@T
1.55e-98FFCP PHASE2:Hg19::chr15:66464730..66464736,-#_997c583b23c812a0dc17c1a86a7fd21c-, p@chr15:66464730..66464736
1.55e-98FFCP PHASE1:Hg19::chr9:138904824..138904829,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr9:138904824..138904829, +
1.55e-98FFCP PHASE2:Hg19::chrX:89012355..89012363,+#_997c583b23c812a0dc17c1a86a7fd21cp@chrX:89012355..89012363, +
1.55e-98FFCP PHASE1:Hg19::chr4:176353908..176353917,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr4:176353908..176353917, -
1.55e-98FFCP PHASE2:Hg19::chr14:106829914..106829921,-#_997c583b23c812a0dc17c1a86a7fd21cp1@HM996258, p1@HM996415, p1@HM996438
1.55e-98FFCP PHASE2:Hg19::chr6:166581265..166581274,-#_997c583b23c812a0dc17c1a86a7fd21cp5@T
1.55e-98FFCP PHASE1:Hg19::chrX:89012355..89012363,+#_997c583b23c812a0dc17c1a86a7fd21cp@chrX:89012355..89012363, +
1.55e-98FFCP PHASE2:Hg19::chr12:4313331..4313334,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr12:4313331..4313334, +
1.55e-98FFCP PHASE1:Hg19::chr17:76471146..76471155,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr17:76471146..76471155, +
1.55e-98FFCP PHASE2:Hg19::chr7:86415255..86415288,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr7:86415255..86415288, +
1.55e-98FFCP PHASE1:Hg19::chr6:164466441..164466449,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr6:164466441..164466449, +
1.55e-98FFCP PHASE2:Hg19::chr3:79363599..79363606,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr3:79363599..79363606, +
1.55e-98FFCP PHASE2:Hg19::chr3:168337915..168337930,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr3:168337915..168337930, -
1.55e-98FFCP PHASE1:Hg19::chrX:42727038..42727047,-#_997c583b23c812a0dc17c1a86a7fd21c-, p@chrX:42727038..42727047
1.55e-98FFCP PHASE2:Hg19::chr3:158747347..158747353,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr3:158747347..158747353, +
1.55e-98FFCP PHASE1:Hg19::chr3:178947187..178947192,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr3:178947187..178947192, +
1.55e-98FFCP PHASE1:Hg19::chr12:4313331..4313334,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr12:4313331..4313334, +
1.55e-98FFCP PHASE1:Hg19::chr5:88646759..88646764,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr5:88646759..88646764, +
1.55e-98FFCP PHASE2:Hg19::chr6:164466441..164466449,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr6:164466441..164466449, +
1.55e-98FFCP PHASE2:Hg19::chr2:77746703..77746711,-#_997c583b23c812a0dc17c1a86a7fd21cp9@LRRTM4
1.55e-98FFCP PHASE1:Hg19::chr10:56410468..56410499,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr10:56410468..56410499, -
1.55e-98FFCP PHASE2:Hg19::chr4:176358284..176358287,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr4:176358284..176358287, -
1.55e-98FFCP PHASE1:Hg19::chr17:76475275..76475285,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr17:76475275..76475285, -
1.55e-98FFCP PHASE1:Hg19::chr3:79363599..79363606,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr3:79363599..79363606, +
1.55e-98FFCP PHASE2:Hg19::chr11:26124040..26124064,-#_997c583b23c812a0dc17c1a86a7fd21c-, p@chr11:26124040..26124064
1.55e-98FFCP PHASE1:Hg19::chr14:53594794..53594799,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr14:53594794..53594799, +
1.55e-98FFCP PHASE1:Hg19::chr21:20747453..20747465,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr21:20747453..20747465, -
1.55e-98FFCP PHASE1:Hg19::chr4:176358284..176358287,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr4:176358284..176358287, -
1.55e-98FFCP PHASE1:Hg19::chr7:86415255..86415288,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr7:86415255..86415288, +
1.55e-98FFCP PHASE1:Hg19::chr11:26122006..26122011,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr11:26122006..26122011, -
1.55e-98FFCP PHASE2:Hg19::chr14:53594794..53594799,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr14:53594794..53594799, +
1.55e-98FFCP PHASE2:Hg19::chr8:128270027..128270033,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr8:128270027..128270033, -
1.55e-98FFCP PHASE2:Hg19::chr17:76471146..76471155,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr17:76471146..76471155, +
1.55e-98FFCP PHASE2:Hg19::chr4:3881462..3881469,-#_997c583b23c812a0dc17c1a86a7fd21cp@chr4:3881462..3881469, -
1.55e-98FFCP PHASE1:Hg19::chr6:166581583..166581586,+#_997c583b23c812a0dc17c1a86a7fd21cp@chr6:166581583..166581586, +


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