Personal tools

CL:0001029

From FANTOM5_SSTAR

Jump to: navigation, search
Name:common dendritic progenitor
Namespace:FANTOM
Definition:"Common dendritic precursor is a hematopoietic progenitor cell that is CD117-low, CD135-positive, CD115-positive and lacks plasma membrane parts for hematopoietic lineage markers." [GO_REF:0000031, GOC:amm, GOC:tfm, PMID:16551251, PMID:17922016, PMID:19286519]
Synonyms: "CDP" EXACT [PMID:21219184]
"common dendritic precursor" EXACT []
"pro-DCs" EXACT [PMID:21219184]
Comments:Surface markers are for mouse cells. Originally described in the dendritic cell ontology (DC_CL:0000041) CDP are reportedly CD2-negative, CD3-negative, CD4-negative, CD5-negative, CD8a-negative, CD11c-positive, CD14-negative, CD19-negative, CD20-negative, CD56-negative, B220-negative, Ly6g-negative, MHCII-positive, and Ter119-negative. (PMID: 19243617).


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data

Parents

is_a:CL:0000763(myeloid cell),CL:0001019(CD115-positive monocyte OR common dendritic progenitor)
develops_from:CL:0002009(macrophage dendritic cell progenitor)



Children


develops from:CL:0000840 (immature conventional dendritic cell)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0001029 (common dendritic progenitor), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
2.64e-136FFCP PHASE2:Hg19::chr1:159272441..159272452,+#_63b95b3cf1d84604e92b44aa499c84bfp5@FCER1A
2.64e-136FFCP PHASE1:Hg19::chr1:159272441..159272452,+#_63b95b3cf1d84604e92b44aa499c84bfp5@FCER1A
3.49e-136FFCP PHASE2:Hg19::chr1:159272420..159272431,+#_cd5b0b4ec4ebe1261012f563787d6bc8p3@FCER1A
3.49e-136FFCP PHASE1:Hg19::chr1:159272420..159272431,+#_cd5b0b4ec4ebe1261012f563787d6bc8p3@FCER1A
4.61e-136FFCP PHASE1:Hg19::chr2:61080954..61080964,+#_e03ccfa6f237bb10cff002d1751d1ad1p@chr2:61080954..61080964, +
4.61e-136FFCP PHASE2:Hg19::chr2:61080954..61080964,+#_e03ccfa6f237bb10cff002d1751d1ad1p@chr2:61080954..61080964, +
1.07e-130FFCP PHASE2:Hg19::chr4:16267477..16267486,-#_51e723bc34caba2e0282841357efaf78p@chr4:16267477..16267486, -
1.07e-130FFCP PHASE2:Hg19::chr17:6982145..6982156,-#_51e723bc34caba2e0282841357efaf78p1@CU691636
1.07e-130FFCP PHASE1:Hg19::chr4:16267477..16267486,-#_51e723bc34caba2e0282841357efaf78p@chr4:16267477..16267486, -
1.07e-130FFCP PHASE1:Hg19::chr17:6982145..6982156,-#_51e723bc34caba2e0282841357efaf78p1@CU691636
3.08e-117FFCP PHASE2:Hg19::chr1:158224278..158224289,+#_7c7bcb607b8395c070b13630126f66e0p9@CD1A
3.08e-117FFCP PHASE1:Hg19::chr1:158224278..158224289,+#_7c7bcb607b8395c070b13630126f66e0p9@CD1A
6.33e-117FFCP PHASE1:Hg19::chr9:124030015..124030022,+#_9e50cfbd40690851d4b9c46fc05a1a23p43@GSN
6.33e-117FFCP PHASE2:Hg19::chr9:124030015..124030022,+#_9e50cfbd40690851d4b9c46fc05a1a23p43@GSN
6.76e-105FFCP PHASE2:Hg19::chr17:6983503..6983512,-#_4bbd4b744b64eb26dafa677f217b460fp5@CLEC10A
6.76e-105FFCP PHASE1:Hg19::chr17:6983503..6983512,-#_4bbd4b744b64eb26dafa677f217b460fp5@CLEC10A
1.51e-104FFCP PHASE2:Hg19::chr12:121976278..121976285,-#_f8d3e7d9b51122fe6c13fd047e8645a2p@chr12:121976278..121976285, -
1.51e-104FFCP PHASE1:Hg19::chr12:121976278..121976285,-#_f8d3e7d9b51122fe6c13fd047e8645a2p@chr12:121976278..121976285, -
6.22e-103FFCP PHASE2:Hg19::chr1:158224235..158224244,+#_e2263a727c2d005bf6bbdb74201811b6p10@CD1A
6.22e-103FFCP PHASE1:Hg19::chr1:158224235..158224244,+#_e2263a727c2d005bf6bbdb74201811b6p10@CD1A
9.47e-103FFCP PHASE1:Hg19::chr17:6983479..6983490,-#_2f42bb69bd0143506002d7e9cb2ed2c8p4@CLEC10A
9.47e-103FFCP PHASE2:Hg19::chr17:6983479..6983490,-#_2f42bb69bd0143506002d7e9cb2ed2c8p4@CLEC10A
4.11e-102FFCP PHASE1:Hg19::chr15:101535004..101535045,+#_72b61155d7d09c6c9411aab44bf0ad2ap@chr15:101535004..101535045, +
4.11e-102FFCP PHASE2:Hg19::chr15:101535004..101535045,+#_72b61155d7d09c6c9411aab44bf0ad2ap@chr15:101535004..101535045, +
1.83e-98FFCP PHASE1:Hg19::chr6:42145678..42145695,+#_3c785f50463d66eaf342c3585be24860p@chr6:42145678..42145695, +
1.83e-98FFCP PHASE1:Hg19::chr10:127738495..127738498,-#_3c785f50463d66eaf342c3585be24860p@chr10:127738495..127738498, -
1.83e-98FFCP PHASE2:Hg19::chr11:1870362..1870366,-#_3c785f50463d66eaf342c3585be24860p@chr11:1870362..1870366, -
1.83e-98FFCP PHASE2:Hg19::chr17:26961255..26961266,-#_3c785f50463d66eaf342c3585be24860p@chr17:26961255..26961266, -
1.83e-98FFCP PHASE2:Hg19::chr4:78105380..78105389,+#_3c785f50463d66eaf342c3585be24860p@chr4:78105380..78105389, +
1.83e-98FFCP PHASE1:Hg19::chr16:5070595..5070602,-#_3c785f50463d66eaf342c3585be24860p@chr16:5070595..5070602, -
1.83e-98FFCP PHASE1:Hg19::chr9:131235697..131235702,+#_3c785f50463d66eaf342c3585be24860p@chr9:131235697..131235702, +
1.83e-98FFCP PHASE2:Hg19::chr10:127738495..127738498,-#_3c785f50463d66eaf342c3585be24860p@chr10:127738495..127738498, -
1.83e-98FFCP PHASE2:Hg19::chr10:119014661..119014665,+#_3c785f50463d66eaf342c3585be24860p@chr10:119014661..119014665, +
1.83e-98FFCP PHASE1:Hg19::chr17:46058452..46058468,+#_3c785f50463d66eaf342c3585be24860p@chr17:46058452..46058468, +
1.83e-98FFCP PHASE1:Hg19::chr17:26961255..26961266,-#_3c785f50463d66eaf342c3585be24860p@chr17:26961255..26961266, -
1.83e-98FFCP PHASE1:Hg19::chr17:8171916..8171922,+#_3c785f50463d66eaf342c3585be24860p4@PFAS
1.83e-98FFCP PHASE1:Hg19::chr11:7544941..7544949,+#_3c785f50463d66eaf342c3585be24860p@chr11:7544941..7544949, +
1.83e-98FFCP PHASE1:Hg19::chr15:45454976..45454985,+#_3c785f50463d66eaf342c3585be24860p@chr15:45454976..45454985, +
1.83e-98FFCP PHASE1:Hg19::chr19:17843005..17843009,+#_3c785f50463d66eaf342c3585be24860p@chr19:17843005..17843009, +
1.83e-98FFCP PHASE1:Hg19::chr6:32156759..32156767,+#_3c785f50463d66eaf342c3585be24860p@chr6:32156759..32156767, +
1.83e-98FFCP PHASE1:Hg19::chr5:86707848..86707855,-#_3c785f50463d66eaf342c3585be24860p@chr5:86707848..86707855, -
1.83e-98FFCP PHASE1:Hg19::chr17:6982162..6982170,-#_3c785f50463d66eaf342c3585be24860p2@CU691636
1.83e-98FFCP PHASE1:Hg19::chr6:42145703..42145716,+#_3c785f50463d66eaf342c3585be24860p@chr6:42145703..42145716, +
1.83e-98FFCP PHASE2:Hg19::chr11:1870376..1870388,-#_3c785f50463d66eaf342c3585be24860p@chr11:1870376..1870388, -
1.83e-98FFCP PHASE1:Hg19::chr4:91005462..91005483,+#_3c785f50463d66eaf342c3585be24860p@chr4:91005462..91005483, +
1.83e-98FFCP PHASE1:Hg19::chr1:153744224..153744233,+#_3c785f50463d66eaf342c3585be24860p@chr1:153744224..153744233, +
1.83e-98FFCP PHASE2:Hg19::chr17:26970937..26970956,-#_3c785f50463d66eaf342c3585be24860p2@KIAA0100
1.83e-98FFCP PHASE1:Hg19::chr11:1870362..1870366,-#_3c785f50463d66eaf342c3585be24860p@chr11:1870362..1870366, -
1.83e-98FFCP PHASE1:Hg19::chr4:169633317..169633344,+#_3c785f50463d66eaf342c3585be24860p43@PALLD
1.83e-98FFCP PHASE2:Hg19::chr8:20258288..20258300,+#_3c785f50463d66eaf342c3585be24860p@chr8:20258288..20258300, +
1.83e-98FFCP PHASE2:Hg19::chr17:46058452..46058468,+#_3c785f50463d66eaf342c3585be24860p@chr17:46058452..46058468, +
1.83e-98FFCP PHASE2:Hg19::chr12:1725865..1725884,+#_3c785f50463d66eaf342c3585be24860p7@WNT5B
1.83e-98FFCP PHASE2:Hg19::chr17:8171916..8171922,+#_3c785f50463d66eaf342c3585be24860p4@PFAS
1.83e-98FFCP PHASE1:Hg19::chr17:26970937..26970956,-#_3c785f50463d66eaf342c3585be24860p2@KIAA0100
1.83e-98FFCP PHASE1:Hg19::chr8:97906247..97906259,+#_3c785f50463d66eaf342c3585be24860p@chr8:97906247..97906259, +
1.83e-98FFCP PHASE2:Hg19::chr20:15229663..15229673,+#_3c785f50463d66eaf342c3585be24860+, p@chr20:15229663..15229673
1.83e-98FFCP PHASE2:Hg19::chr5:86707848..86707855,-#_3c785f50463d66eaf342c3585be24860p@chr5:86707848..86707855, -
1.83e-98FFCP PHASE1:Hg19::chr1:224398082..224398104,-#_3c785f50463d66eaf342c3585be24860p2@ENST00000453760
1.83e-98FFCP PHASE1:Hg19::chr12:1725865..1725884,+#_3c785f50463d66eaf342c3585be24860p7@WNT5B
1.83e-98FFCP PHASE2:Hg19::chr6:42145678..42145695,+#_3c785f50463d66eaf342c3585be24860p@chr6:42145678..42145695, +
1.83e-98FFCP PHASE2:Hg19::chr5:52909608..52909635,+#_3c785f50463d66eaf342c3585be24860p@chr5:52909608..52909635, +
1.83e-98FFCP PHASE1:Hg19::chr16:57399108..57399115,+#_3c785f50463d66eaf342c3585be24860p@chr16:57399108..57399115, +
1.83e-98FFCP PHASE2:Hg19::chr16:5070595..5070602,-#_3c785f50463d66eaf342c3585be24860p@chr16:5070595..5070602, -
1.83e-98FFCP PHASE2:Hg19::chr4:91005462..91005483,+#_3c785f50463d66eaf342c3585be24860p@chr4:91005462..91005483, +
1.83e-98FFCP PHASE1:Hg19::chr10:127738525..127738534,-#_3c785f50463d66eaf342c3585be24860p@chr10:127738525..127738534, -
1.83e-98FFCP PHASE2:Hg19::chr16:57399108..57399115,+#_3c785f50463d66eaf342c3585be24860p@chr16:57399108..57399115, +
1.83e-98FFCP PHASE2:Hg19::chr17:26970962..26970974,-#_3c785f50463d66eaf342c3585be24860p5@KIAA0100
1.83e-98FFCP PHASE2:Hg19::chr15:45454976..45454985,+#_3c785f50463d66eaf342c3585be24860p@chr15:45454976..45454985, +
1.83e-98FFCP PHASE1:Hg19::chr10:46048740..46048751,-#_3c785f50463d66eaf342c3585be24860p@chr10:46048740..46048751, -
1.83e-98FFCP PHASE1:Hg19::chr17:46058415..46058422,+#_3c785f50463d66eaf342c3585be24860p@chr17:46058415..46058422, +
1.83e-98FFCP PHASE1:Hg19::chr11:1870376..1870388,-#_3c785f50463d66eaf342c3585be24860p@chr11:1870376..1870388, -
1.83e-98FFCP PHASE2:Hg19::chr19:10246051..10246052,+#_3c785f50463d66eaf342c3585be24860p@chr19:10246051..10246052, +
1.83e-98FFCP PHASE1:Hg19::chr5:52909608..52909635,+#_3c785f50463d66eaf342c3585be24860p@chr5:52909608..52909635, +
1.83e-98FFCP PHASE2:Hg19::chr10:127738525..127738534,-#_3c785f50463d66eaf342c3585be24860p@chr10:127738525..127738534, -
1.83e-98FFCP PHASE2:Hg19::chr8:20258347..20258360,+#_3c785f50463d66eaf342c3585be24860p@chr8:20258347..20258360, +
1.83e-98FFCP PHASE2:Hg19::chr6:154521063..154521071,-#_3c785f50463d66eaf342c3585be24860p@chr6:154521063..154521071, -
1.83e-98FFCP PHASE2:Hg19::chr12:8278143..8278154,+#_3c785f50463d66eaf342c3585be24860p@chr12:8278143..8278154, +
1.83e-98FFCP PHASE1:Hg19::chr4:78105380..78105389,+#_3c785f50463d66eaf342c3585be24860p@chr4:78105380..78105389, +
1.83e-98FFCP PHASE2:Hg19::chr4:169633317..169633344,+#_3c785f50463d66eaf342c3585be24860p43@PALLD
1.83e-98FFCP PHASE1:Hg19::chr17:26970962..26970974,-#_3c785f50463d66eaf342c3585be24860p5@KIAA0100
1.83e-98FFCP PHASE2:Hg19::chr2:218933972..218933980,+#_3c785f50463d66eaf342c3585be24860p1@RUFY4
1.83e-98FFCP PHASE1:Hg19::chr10:119014647..119014658,+#_3c785f50463d66eaf342c3585be24860p@chr10:119014647..119014658, +
1.83e-98FFCP PHASE2:Hg19::chr14:91019196..91019216,-#_3c785f50463d66eaf342c3585be24860-, p@chr14:91019196..91019216
1.83e-98FFCP PHASE1:Hg19::chr19:10246051..10246052,+#_3c785f50463d66eaf342c3585be24860p@chr19:10246051..10246052, +
1.83e-98FFCP PHASE2:Hg19::chr17:6982162..6982170,-#_3c785f50463d66eaf342c3585be24860p2@CU691636
1.83e-98FFCP PHASE2:Hg19::chr6:42145703..42145716,+#_3c785f50463d66eaf342c3585be24860p@chr6:42145703..42145716, +
1.83e-98FFCP PHASE1:Hg19::chr2:218933972..218933980,+#_3c785f50463d66eaf342c3585be24860p1@RUFY4
1.83e-98FFCP PHASE2:Hg19::chr17:67125354..67125365,-#_3c785f50463d66eaf342c3585be24860p@chr17:67125354..67125365, -
1.83e-98FFCP PHASE2:Hg19::chr8:17777952..17777982,-#_3c785f50463d66eaf342c3585be24860-, p@chr8:17777952..17777982
1.83e-98FFCP PHASE1:Hg19::chr10:127738551..127738554,-#_3c785f50463d66eaf342c3585be24860p@chr10:127738551..127738554, -
1.83e-98FFCP PHASE2:Hg19::chr17:46058415..46058422,+#_3c785f50463d66eaf342c3585be24860p@chr17:46058415..46058422, +
1.83e-98FFCP PHASE1:Hg19::chr8:20258288..20258300,+#_3c785f50463d66eaf342c3585be24860p@chr8:20258288..20258300, +
1.83e-98FFCP PHASE1:Hg19::chr17:46058427..46058445,+#_3c785f50463d66eaf342c3585be24860p@chr17:46058427..46058445, +
1.83e-98FFCP PHASE2:Hg19::chr11:7544914..7544928,+#_3c785f50463d66eaf342c3585be24860p@chr11:7544914..7544928, +
1.83e-98FFCP PHASE2:Hg19::chr14:55590616..55590617,+#_3c785f50463d66eaf342c3585be24860p33@LGALS3
1.83e-98FFCP PHASE2:Hg19::chr10:127738551..127738554,-#_3c785f50463d66eaf342c3585be24860p@chr10:127738551..127738554, -
1.83e-98FFCP PHASE1:Hg19::chr6:154521063..154521071,-#_3c785f50463d66eaf342c3585be24860p@chr6:154521063..154521071, -
1.83e-98FFCP PHASE2:Hg19::chr9:131235669..131235680,+#_3c785f50463d66eaf342c3585be24860+, p@chr9:131235669..131235680
1.83e-98FFCP PHASE2:Hg19::chr10:46048740..46048751,-#_3c785f50463d66eaf342c3585be24860p@chr10:46048740..46048751, -
1.83e-98FFCP PHASE2:Hg19::chr1:224398082..224398104,-#_3c785f50463d66eaf342c3585be24860p2@ENST00000453760

Retrieved from "http://f5-webapp2.gsc.riken.jp/5/sstar/index.php?title=CL:0001029&oldid=3275393"