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CL:0002028

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Name:basophil mast progenitor cell
Namespace:FANTOM
Definition:"A cell type that can give rise to basophil and mast cells. This cell is CD34-positive, CD117-positive, CD125-positive, FceRIa-negative, and T1/ST2-negative, and expresses Gata-1, Gata-2, C/EBPa" [GOC:ak, GOC:dsd, GOC:tfm, PMCID:PMC1312421]
Synonyms: "BMCP" EXACT []
Comments:There may be an intermediate cell type. These cells also CD13-positive, CD16-positive, CD32-positive, and integrin beta 7-positive. Transcription factors: GATA1-positive, MCP-1-positive, mitf-positive, PU.1-positive, and CEBP/a-low.
Created by:tmeehan
Creation date:2010-04-27T12:46:33Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000763(myeloid cell),CL:0002191(granulocytopoietic cell)
develops_from:CL:0000557(granulocyte monocyte progenitor cell)



Children


develops from:CL:0000831 (mast cell progenitor)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002028 (basophil mast progenitor cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.45e-195FFCP PHASE1:Hg19::chrX:100617644..100617655,-#_895f8e0d07b1954159d17dab9cd9cff9p5@BTK
2.45e-195FFCP PHASE2:Hg19::chr19:52033117..52033128,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr19:52033117..52033128, -
2.45e-195FFCP PHASE2:Hg19::chr11:59855794..59855805,+#_895f8e0d07b1954159d17dab9cd9cff9p5@MS4A2
2.45e-195FFCP PHASE1:Hg19::chr19:52034316..52034326,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr19:52034316..52034326, -
2.45e-195FFCP PHASE2:Hg19::chr4:95261065..95261071,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr4:95261065..95261071, +
2.45e-195FFCP PHASE2:Hg19::chr14:25464405..25464415,-#_895f8e0d07b1954159d17dab9cd9cff9-, p@chr14:25464405..25464415
2.45e-195FFCP PHASE1:Hg19::chr16:1280084..1280116,-#_895f8e0d07b1954159d17dab9cd9cff9p2@TPSB2
2.45e-195FFCP PHASE1:Hg19::chr6:16547983..16547995,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr6:16547983..16547995, -
2.45e-195FFCP PHASE1:Hg19::chr1:20513747..20513758,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr1:20513747..20513758, -
2.45e-195FFCP PHASE2:Hg19::chr1:247737511..247737525,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr1:247737511..247737525, +
2.45e-195FFCP PHASE1:Hg19::chr11:59857223..59857242,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr11:59857223..59857242, +
2.45e-195FFCP PHASE1:Hg19::chr3:148583254..148583275,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr3:148583254..148583275, +
2.45e-195FFCP PHASE2:Hg19::chr6:57326117..57326124,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr6:57326117..57326124, +
2.45e-195FFCP PHASE1:Hg19::chr4:175501777..175501788,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr4:175501777..175501788, -
2.45e-195FFCP PHASE1:Hg19::chr6:57326117..57326124,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr6:57326117..57326124, +
2.45e-195FFCP PHASE1:Hg19::chr11:123985831..123985858,+#_895f8e0d07b1954159d17dab9cd9cff9p2@VWA5A
2.45e-195FFCP PHASE2:Hg19::chr7:106372896..106372907,-#_895f8e0d07b1954159d17dab9cd9cff9p3@ENST00000490856
2.45e-195FFCP PHASE2:Hg19::chr2:160085182..160085196,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr2:160085182..160085196, +
2.45e-195FFCP PHASE2:Hg19::chr11:59857223..59857242,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr11:59857223..59857242, +
2.45e-195FFCP PHASE2:Hg19::chr6:16547983..16547995,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr6:16547983..16547995, -
2.45e-195FFCP PHASE2:Hg19::chr3:14425446..14425450,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr3:14425446..14425450, +
2.45e-195FFCP PHASE1:Hg19::chr3:148601435..148601446,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr3:148601435..148601446, +
2.45e-195FFCP PHASE1:Hg19::chr10:131653288..131653294,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr10:131653288..131653294, -
2.45e-195FFCP PHASE1:Hg19::chr11:47175922..47175952,+#_895f8e0d07b1954159d17dab9cd9cff9p3@C11orf49
2.45e-195FFCP PHASE2:Hg19::chr8:81214082..81214083,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr8:81214082..81214083, +
2.45e-195FFCP PHASE1:Hg19::chr19:7923338..7923341,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr19:7923338..7923341, -
2.45e-195FFCP PHASE1:Hg19::chr1:194021388..194021407,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr1:194021388..194021407, +
2.45e-195FFCP PHASE2:Hg19::chr11:123985831..123985858,+#_895f8e0d07b1954159d17dab9cd9cff9p2@VWA5A
2.45e-195FFCP PHASE1:Hg19::chr9:116457979..116457994,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr9:116457979..116457994, +
2.45e-195FFCP PHASE1:Hg19::chr2:160085237..160085246,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr2:160085237..160085246, +
2.45e-195FFCP PHASE1:Hg19::chr11:123988337..123988344,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr11:123988337..123988344, +
2.45e-195FFCP PHASE1:Hg19::chr6:23456883..23456894,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr6:23456883..23456894, +
2.45e-195FFCP PHASE1:Hg19::chr19:56673770..56673786,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr19:56673770..56673786, -
2.45e-195FFCP PHASE2:Hg19::chr5:108071789..108071807,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr5:108071789..108071807, +
2.45e-195FFCP PHASE1:Hg19::chr19:51961061..51961069,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr19:51961061..51961069, -
2.45e-195FFCP PHASE1:Hg19::chr14:25464405..25464415,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr14:25464405..25464415, -
2.45e-195FFCP PHASE1:Hg19::chr13:109328158..109328167,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr13:109328158..109328167, +
2.45e-195FFCP PHASE2:Hg19::chr4:55523948..55523989,+#_895f8e0d07b1954159d17dab9cd9cff9p3@KIT
2.45e-195FFCP PHASE2:Hg19::chr9:75770556..75770567,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr9:75770556..75770567, +
2.45e-195FFCP PHASE1:Hg19::chr15:69612281..69612294,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr15:69612281..69612294, -
2.45e-195FFCP PHASE2:Hg19::chr9:116457979..116457994,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr9:116457979..116457994, +
2.45e-195FFCP PHASE2:Hg19::chr2:102922332..102922360,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr2:102922332..102922360, +
2.45e-195FFCP PHASE2:Hg19::chr11:47175922..47175952,+#_895f8e0d07b1954159d17dab9cd9cff9p3@C11orf49
2.45e-195FFCP PHASE2:Hg19::chr19:7923338..7923341,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr19:7923338..7923341, -
2.45e-195FFCP PHASE2:Hg19::chr6:16388683..16388699,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr6:16388683..16388699, -
2.45e-195FFCP PHASE1:Hg19::chr7:138317555..138317567,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr7:138317555..138317567, -
2.45e-195FFCP PHASE2:Hg19::chr19:56673816..56673830,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr19:56673816..56673830, -
2.45e-195FFCP PHASE2:Hg19::chr4:80665456..80665463,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr4:80665456..80665463, -
2.45e-195FFCP PHASE2:Hg19::chr11:123988337..123988344,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr11:123988337..123988344, +
2.45e-195FFCP PHASE1:Hg19::chr6:16388683..16388699,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr6:16388683..16388699, -
2.45e-195FFCP PHASE2:Hg19::chr15:50556017..50556029,-#_895f8e0d07b1954159d17dab9cd9cff9p3@HDC
2.45e-195FFCP PHASE1:Hg19::chr5:108071574..108071598,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr5:108071574..108071598, -
2.45e-195FFCP PHASE1:Hg19::chr7:106372896..106372907,-#_895f8e0d07b1954159d17dab9cd9cff9p3@ENST00000490856
2.45e-195FFCP PHASE2:Hg19::chr7:106372908..106372919,-#_895f8e0d07b1954159d17dab9cd9cff9p2@ENST00000490856
2.45e-195FFCP PHASE2:Hg19::chr1:203732858..203732876,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr1:203732858..203732876, -
2.45e-195FFCP PHASE1:Hg19::chr19:52033117..52033128,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr19:52033117..52033128, -
2.45e-195FFCP PHASE1:Hg19::chr9:75770556..75770567,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr9:75770556..75770567, +
2.45e-195FFCP PHASE1:Hg19::chr4:55523948..55523989,+#_895f8e0d07b1954159d17dab9cd9cff9p3@KIT
2.45e-195FFCP PHASE1:Hg19::chr15:42221779..42221787,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr15:42221779..42221787, +
2.45e-195FFCP PHASE1:Hg19::chr15:50556017..50556029,-#_895f8e0d07b1954159d17dab9cd9cff9p3@HDC
2.45e-195FFCP PHASE1:Hg19::chr1:203732858..203732876,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr1:203732858..203732876, -
2.45e-195FFCP PHASE2:Hg19::chr4:175501777..175501788,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr4:175501777..175501788, -
2.45e-195FFCP PHASE2:Hg19::chr1:194021388..194021407,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr1:194021388..194021407, +
2.45e-195FFCP PHASE2:Hg19::chrX:29959742..29959751,+#_895f8e0d07b1954159d17dab9cd9cff9p@chrX:29959742..29959751, +
2.45e-195FFCP PHASE2:Hg19::chr2:202655190..202655199,+#_895f8e0d07b1954159d17dab9cd9cff9p14@CDK15
2.45e-195FFCP PHASE1:Hg19::chr14:24042158..24042170,-#_895f8e0d07b1954159d17dab9cd9cff9p18@JPH4
2.45e-195FFCP PHASE2:Hg19::chr1:20513747..20513758,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr1:20513747..20513758, -
2.45e-195FFCP PHASE2:Hg19::chr14:24042158..24042170,-#_895f8e0d07b1954159d17dab9cd9cff9p18@JPH4
2.45e-195FFCP PHASE2:Hg19::chr14:24974148..24974156,+#_895f8e0d07b1954159d17dab9cd9cff9+, p@chr14:24974148..24974156
2.45e-195FFCP PHASE2:Hg19::chr16:1280084..1280116,-#_895f8e0d07b1954159d17dab9cd9cff9p2@TPSB2
2.45e-195FFCP PHASE1:Hg19::chr7:106372908..106372919,-#_895f8e0d07b1954159d17dab9cd9cff9p2@ENST00000490856
2.45e-195FFCP PHASE1:Hg19::chr2:160085182..160085196,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr2:160085182..160085196, +
2.45e-195FFCP PHASE1:Hg19::chr3:14425446..14425450,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr3:14425446..14425450, +
2.45e-195FFCP PHASE2:Hg19::chr1:204074045..204074052,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr1:204074045..204074052, +
2.45e-195FFCP PHASE1:Hg19::chr2:12466225..12466247,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr2:12466225..12466247, +
2.45e-195FFCP PHASE2:Hg19::chr13:109328158..109328167,+#_895f8e0d07b1954159d17dab9cd9cff9+, p@chr13:109328158..109328167
2.45e-195FFCP PHASE1:Hg19::chr11:123986842..123986855,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr11:123986842..123986855, +
2.45e-195FFCP PHASE2:Hg19::chr14:54899928..54899942,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr14:54899928..54899942, -
2.45e-195FFCP PHASE2:Hg19::chr15:42221779..42221787,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr15:42221779..42221787, +
2.45e-195FFCP PHASE1:Hg19::chr1:204074045..204074052,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr1:204074045..204074052, +
2.45e-195FFCP PHASE1:Hg19::chr2:102922332..102922360,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr2:102922332..102922360, +
2.45e-195FFCP PHASE1:Hg19::chr19:56673816..56673830,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr19:56673816..56673830, -
2.45e-195FFCP PHASE2:Hg19::chr11:123986842..123986855,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr11:123986842..123986855, +
2.45e-195FFCP PHASE2:Hg19::chr10:131653288..131653294,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr10:131653288..131653294, -
2.45e-195FFCP PHASE1:Hg19::chr4:79698211..79698260,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr4:79698211..79698260, +
2.45e-195FFCP PHASE1:Hg19::chrX:29959742..29959751,+#_895f8e0d07b1954159d17dab9cd9cff9p@chrX:29959742..29959751, +
2.45e-195FFCP PHASE2:Hg19::chr19:52034316..52034326,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr19:52034316..52034326, -
2.45e-195FFCP PHASE2:Hg19::chr4:55406116..55406147,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr4:55406116..55406147, +
2.45e-195FFCP PHASE2:Hg19::chr2:12466225..12466247,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr2:12466225..12466247, +
2.45e-195FFCP PHASE1:Hg19::chr4:95261065..95261071,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr4:95261065..95261071, +
2.45e-195FFCP PHASE2:Hg19::chr6:16388717..16388738,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr6:16388717..16388738, -
2.45e-195FFCP PHASE2:Hg19::chrX:29959760..29959772,+#_895f8e0d07b1954159d17dab9cd9cff9p@chrX:29959760..29959772, +
2.45e-195FFCP PHASE1:Hg19::chr6:16388717..16388738,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr6:16388717..16388738, -
2.45e-195FFCP PHASE1:Hg19::chr2:202655190..202655199,+#_895f8e0d07b1954159d17dab9cd9cff9p14@CDK15
2.45e-195FFCP PHASE1:Hg19::chr5:108071789..108071807,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr5:108071789..108071807, +
2.45e-195FFCP PHASE2:Hg19::chr2:160085237..160085246,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr2:160085237..160085246, +
2.45e-195FFCP PHASE2:Hg19::chr3:148583254..148583275,+#_895f8e0d07b1954159d17dab9cd9cff9p@chr3:148583254..148583275, +
2.45e-195FFCP PHASE2:Hg19::chr5:108071574..108071598,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr5:108071574..108071598, -
2.45e-195FFCP PHASE2:Hg19::chr19:56673770..56673786,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr19:56673770..56673786, -
2.45e-195FFCP PHASE1:Hg19::chr14:54899928..54899942,-#_895f8e0d07b1954159d17dab9cd9cff9p@chr14:54899928..54899942, -