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CL:0002040

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Name:immature NK T cell stage II
Namespace:FANTOM
Definition:"A CD24-low, CD44-negative, NK1.1-negative NK T cell." [GOC:tfm, http://www.immgen.org/index_content.html, PMID:17589542]
Synonyms: "NKT.44-NK1.1-.Th" EXACT []
Comments:NKT.44-NK1.1-.Th was assigned as an exact synonym based on sorting strategy displayed at immgene.org.
Created by:tmeehan
Creation date:2009-10-29T04:13:43Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000914(immature NK T cell)
develops_from:CL:0002039(immature NK T cell stage I)



Children


develops from:CL:0002041 (immature NK T cell stage III)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002040 (immature NK T cell stage II), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr4:111448516..111448521,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:111448516..111448521, +
5.42e-195FFCP PHASE2:Hg19::chr6:128263833..128263838,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr6:128263833..128263838, -
5.42e-195FFCP PHASE2:Hg19::chr14:22962827..22962830,+#_3fff15c3e6e566144fd12ae9c1f25e6cp3@uc001weo.2
5.42e-195FFCP PHASE1:Hg19::chr4:176123823..176123829,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:176123823..176123829, +
5.42e-195FFCP PHASE1:Hg19::chr15:92006659..92006679,+#_3fff15c3e6e566144fd12ae9c1f25e6cp2@uc002bqw.2
5.42e-195FFCP PHASE1:Hg19::chr4:134707449..134707458,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:134707449..134707458, -
5.42e-195FFCP PHASE2:Hg19::chr4:105805755..105805761,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:105805755..105805761, +
5.42e-195FFCP PHASE1:Hg19::chrX:133321044..133321049,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chrX:133321044..133321049, +
5.42e-195FFCP PHASE1:Hg19::chr4:133657651..133657654,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:133657651..133657654, -
5.42e-195FFCP PHASE2:Hg19::chr16:67022368..67022374,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr16:67022368..67022374, -
5.42e-195FFCP PHASE2:Hg19::chr4:175842470..175842486,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:175842470..175842486, -
5.42e-195FFCP PHASE2:Hg19::chr4:134707474..134707504,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:134707474..134707504, -
5.42e-195FFCP PHASE1:Hg19::chr17:14101134..14101143,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr17:14101134..14101143, +
5.42e-195FFCP PHASE1:Hg19::chr2:146687090..146687095,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr2:146687090..146687095, +
5.42e-195FFCP PHASE2:Hg19::chr9:72117884..72117889,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr9:72117884..72117889, -
5.42e-195FFCP PHASE1:Hg19::chr4:175842511..175842520,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:175842511..175842520, -
5.42e-195FFCP PHASE1:Hg19::chr9:4544914..4544917,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr9:4544914..4544917, -
5.42e-195FFCP PHASE2:Hg19::chr5:24272119..24272147,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr5:24272119..24272147, -
5.42e-195FFCP PHASE2:Hg19::chr2:146687090..146687095,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr2:146687090..146687095, +
5.42e-195FFCP PHASE2:Hg19::chr15:91989101..91989105,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr15:91989101..91989105, +
5.42e-195FFCP PHASE2:Hg19::chr4:176123823..176123829,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:176123823..176123829, +
5.42e-195FFCP PHASE1:Hg19::chr16:67022368..67022374,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr16:67022368..67022374, -
5.42e-195FFCP PHASE1:Hg19::chr9:87797549..87797564,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr9:87797549..87797564, +
5.42e-195FFCP PHASE1:Hg19::chr7:19479837..19479844,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr7:19479837..19479844, +
5.42e-195FFCP PHASE1:Hg19::chr21:43982135..43982142,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr21:43982135..43982142, +
5.42e-195FFCP PHASE1:Hg19::chr21:39490932..39490937,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr21:39490932..39490937, +
5.42e-195FFCP PHASE1:Hg19::chr15:92006720..92006726,+#_3fff15c3e6e566144fd12ae9c1f25e6cp1@uc002bqw.2
5.42e-195FFCP PHASE1:Hg19::chr4:134707474..134707504,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:134707474..134707504, -
5.42e-195FFCP PHASE2:Hg19::chr4:128884938..128884941,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:128884938..128884941, -
5.42e-195FFCP PHASE2:Hg19::chr2:141989111..141989114,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr2:141989111..141989114, -
5.42e-195FFCP PHASE2:Hg19::chr3:152204326..152204345,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr3:152204326..152204345, +
5.42e-195FFCP PHASE2:Hg19::chr4:175842511..175842520,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:175842511..175842520, -
5.42e-195FFCP PHASE2:Hg19::chr9:87797549..87797564,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr9:87797549..87797564, +
5.42e-195FFCP PHASE1:Hg19::chr4:105805755..105805761,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:105805755..105805761, +
5.42e-195FFCP PHASE2:Hg19::chr21:43982135..43982142,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr21:43982135..43982142, +
5.42e-195FFCP PHASE1:Hg19::chr14:22962827..22962830,+#_3fff15c3e6e566144fd12ae9c1f25e6cp3@uc001weo.2
5.42e-195FFCP PHASE1:Hg19::chr17:14103251..14103258,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr17:14103251..14103258, +
5.42e-195FFCP PHASE1:Hg19::chr2:146998057..146998070,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr2:146998057..146998070, -
5.42e-195FFCP PHASE1:Hg19::chr4:175842537..175842553,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:175842537..175842553, -
5.42e-195FFCP PHASE1:Hg19::chr1:200990231..200990238,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr1:200990231..200990238, -
5.42e-195FFCP PHASE2:Hg19::chr9:4544914..4544917,-#_3fff15c3e6e566144fd12ae9c1f25e6c-, p@chr9:4544914..4544917
5.42e-195FFCP PHASE2:Hg19::chr15:91989133..91989141,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr15:91989133..91989141, +
5.42e-195FFCP PHASE1:Hg19::chr22:46041912..46041915,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr22:46041912..46041915, +
5.42e-195FFCP PHASE1:Hg19::chr8:114877856..114877881,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr8:114877856..114877881, -
5.42e-195FFCP PHASE2:Hg19::chr2:202521027..202521058,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr2:202521027..202521058, -
5.42e-195FFCP PHASE2:Hg19::chr3:192598433..192598481,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr3:192598433..192598481, -
5.42e-195FFCP PHASE1:Hg19::chr3:152204326..152204345,+#_3fff15c3e6e566144fd12ae9c1f25e6c+, p@chr3:152204326..152204345
5.42e-195FFCP PHASE1:Hg19::chr8:75251775..75251785,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr8:75251775..75251785, +
5.42e-195FFCP PHASE2:Hg19::chr10:11846830..11846860,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr10:11846830..11846860, -
5.42e-195FFCP PHASE2:Hg19::chr21:39490932..39490937,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr21:39490932..39490937, +
5.42e-195FFCP PHASE2:Hg19::chr4:133657589..133657598,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:133657589..133657598, -
5.42e-195FFCP PHASE1:Hg19::chr2:202521027..202521058,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr2:202521027..202521058, -
5.42e-195FFCP PHASE1:Hg19::chr15:69972162..69972169,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr15:69972162..69972169, +
5.42e-195FFCP PHASE1:Hg19::chr7:38287827..38287832,-#_3fff15c3e6e566144fd12ae9c1f25e6c-, p@chr7:38287827..38287832
5.42e-195FFCP PHASE2:Hg19::chr16:67022522..67022529,+#_3fff15c3e6e566144fd12ae9c1f25e6cp12@CES4A
5.42e-195FFCP PHASE1:Hg19::chr10:11846830..11846860,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr10:11846830..11846860, -
5.42e-195FFCP PHASE2:Hg19::chr1:237900222..237900230,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr1:237900222..237900230, +
5.42e-195FFCP PHASE2:Hg19::chr17:14101134..14101143,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr17:14101134..14101143, +
5.42e-195FFCP PHASE2:Hg19::chr4:175842537..175842553,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:175842537..175842553, -
5.42e-195FFCP PHASE1:Hg19::chr1:237900222..237900230,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr1:237900222..237900230, +
5.42e-195FFCP PHASE2:Hg19::chr2:162762231..162762234,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr2:162762231..162762234, +
5.42e-195FFCP PHASE1:Hg19::chr13:49078833..49078841,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr13:49078833..49078841, -
5.42e-195FFCP PHASE2:Hg19::chr22:46041912..46041915,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr22:46041912..46041915, +
5.42e-195FFCP PHASE1:Hg19::chr4:175858389..175858405,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:175858389..175858405, -
5.42e-195FFCP PHASE2:Hg19::chr8:16739475..16739490,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr8:16739475..16739490, -
5.42e-195FFCP PHASE1:Hg19::chr8:67519931..67519935,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr8:67519931..67519935, -
5.42e-195FFCP PHASE2:Hg19::chr7:38287827..38287832,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr7:38287827..38287832, -
5.42e-195FFCP PHASE2:Hg19::chr8:51970952..51970959,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr8:51970952..51970959, +
5.42e-195FFCP PHASE1:Hg19::chr8:50081052..50081075,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr8:50081052..50081075, -
5.42e-195FFCP PHASE1:Hg19::chr15:91989101..91989105,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr15:91989101..91989105, +
5.42e-195FFCP PHASE1:Hg19::chr1:189141918..189141929,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr1:189141918..189141929, +
5.42e-195FFCP PHASE2:Hg19::chr2:146998057..146998070,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr2:146998057..146998070, -
5.42e-195FFCP PHASE2:Hg19::chr15:92006659..92006679,+#_3fff15c3e6e566144fd12ae9c1f25e6cp2@uc002bqw.2
5.42e-195FFCP PHASE1:Hg19::chr6:128263833..128263838,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr6:128263833..128263838, -
5.42e-195FFCP PHASE1:Hg19::chr4:128884938..128884941,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:128884938..128884941, -
5.42e-195FFCP PHASE1:Hg19::chr16:67022522..67022529,+#_3fff15c3e6e566144fd12ae9c1f25e6cp12@CES4A
5.42e-195FFCP PHASE2:Hg19::chr13:49078833..49078841,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr13:49078833..49078841, -
5.42e-195FFCP PHASE2:Hg19::chr8:75251775..75251785,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr8:75251775..75251785, +
5.42e-195FFCP PHASE1:Hg19::chr21:47278815..47278834,+#_3fff15c3e6e566144fd12ae9c1f25e6cp6@PCBP3
5.42e-195FFCP PHASE2:Hg19::chr4:134707420..134707442,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:134707420..134707442, -
5.42e-195FFCP PHASE1:Hg19::chr9:72117884..72117889,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr9:72117884..72117889, -
5.42e-195FFCP PHASE2:Hg19::chr7:117926347..117926353,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr7:117926347..117926353, -
5.42e-195FFCP PHASE2:Hg19::chr4:133657651..133657654,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:133657651..133657654, -
5.42e-195FFCP PHASE2:Hg19::chr8:50081052..50081075,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr8:50081052..50081075, -
5.42e-195FFCP PHASE2:Hg19::chr4:111448516..111448521,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:111448516..111448521, +
5.42e-195FFCP PHASE2:Hg19::chr9:116857558..116857566,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr9:116857558..116857566, -
5.42e-195FFCP PHASE1:Hg19::chr3:192598433..192598481,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr3:192598433..192598481, -
5.42e-195FFCP PHASE1:Hg19::chr7:117926347..117926353,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr7:117926347..117926353, -
5.42e-195FFCP PHASE2:Hg19::chr17:14103251..14103258,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr17:14103251..14103258, +
5.42e-195FFCP PHASE2:Hg19::chr4:175858389..175858405,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr4:175858389..175858405, -
5.42e-195FFCP PHASE2:Hg19::chr15:69972162..69972169,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr15:69972162..69972169, +
5.42e-195FFCP PHASE2:Hg19::chr21:47278815..47278834,+#_3fff15c3e6e566144fd12ae9c1f25e6cp6@PCBP3
5.42e-195FFCP PHASE2:Hg19::chr7:19479837..19479844,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr7:19479837..19479844, +
5.42e-195FFCP PHASE2:Hg19::chr8:67519931..67519935,-#_3fff15c3e6e566144fd12ae9c1f25e6c-, p@chr8:67519931..67519935
5.42e-195FFCP PHASE2:Hg19::chr1:200990231..200990238,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr1:200990231..200990238, -
5.42e-195FFCP PHASE2:Hg19::chr4:2428062..2428080,+#_3fff15c3e6e566144fd12ae9c1f25e6cp1@uc003gfa.1
5.42e-195FFCP PHASE1:Hg19::chr8:51970952..51970959,+#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr8:51970952..51970959, +
5.42e-195FFCP PHASE1:Hg19::chr4:2428062..2428080,+#_3fff15c3e6e566144fd12ae9c1f25e6cp1@uc003gfa.1
5.42e-195FFCP PHASE1:Hg19::chr8:16739475..16739490,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr8:16739475..16739490, -
5.42e-195FFCP PHASE1:Hg19::chr9:116857558..116857566,-#_3fff15c3e6e566144fd12ae9c1f25e6cp@chr9:116857558..116857566, -