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CL:0002304

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Name:non-pigmented ciliary epithelial cell
Namespace:FANTOM
Definition:"A multi-ciliated cell of the retina that lacks visual pigment and contributes to aqueous humor by secreting chloride ions. This cell type maintains gap junctions with pigmented epithelial cells." [GOC:tfm, PMID:15106942]
Xrefs:
links:
FMA:70607
Synonyms: "NPE" EXACT []
Created by:tmeehan
Creation date:2010-09-13T04:09:31Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000067(ciliated epithelial cell),CL:0000710(neurecto-epithelial cell),CL:0005012(multi-ciliated epithelial cell)
part_of:UBERON:0001778(ciliary epithelium)



Children


derives from:FF:0000040 (human ciliary epithelial cell sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002304 (non-pigmented ciliary epithelial cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
8.93e-147FFCP PHASE2:Hg19::chr12:97856211..97856221,+#_8184d99d61026a7744e8061a0588073cp@chr12:97856211..97856221, +
8.93e-147FFCP PHASE1:Hg19::chr12:97856211..97856221,+#_8184d99d61026a7744e8061a0588073cp@chr12:97856211..97856221, +
7.78e-118FFCP PHASE2:Hg19::chr13:36052762..36052767,-#_cd80e70ecbbe585f4ea23f352b853c0bp@chr13:36052762..36052767, -
7.78e-118FFCP PHASE1:Hg19::chr13:36052762..36052767,-#_cd80e70ecbbe585f4ea23f352b853c0bp@chr13:36052762..36052767, -
7.78e-118FFCP PHASE1:Hg19::chr8:41119800..41119811,-#_cd80e70ecbbe585f4ea23f352b853c0bp5@SFRP1
7.78e-118FFCP PHASE2:Hg19::chr8:41119800..41119811,-#_cd80e70ecbbe585f4ea23f352b853c0bp5@SFRP1
2.59e-117FFCP PHASE2:Hg19::chrX:106198807..106198826,-#_50033488cd35d3cb90b108e102acc412p@chrX:106198807..106198826, -
2.59e-117FFCP PHASE1:Hg19::chr16:58896129..58896134,-#_50033488cd35d3cb90b108e102acc412p@chr16:58896129..58896134, -
2.59e-117FFCP PHASE2:Hg19::chr16:58896129..58896134,-#_50033488cd35d3cb90b108e102acc412p@chr16:58896129..58896134, -
2.59e-117FFCP PHASE1:Hg19::chrX:106198807..106198826,-#_50033488cd35d3cb90b108e102acc412p@chrX:106198807..106198826, -
4.06e-99FFCP PHASE2:Hg19::chr14:61654180..61654191,+#_243e349779dccee30d736c6ef0249f9fp33@PRKCH
4.06e-99FFCP PHASE1:Hg19::chr14:61654180..61654191,+#_243e349779dccee30d736c6ef0249f9fp33@PRKCH
1.55e-98FFCP PHASE1:Hg19::chrX:106146585..106146594,-#_97b215a885eb09efd15b51a8d5446d09p2@RIPPLY1
1.55e-98FFCP PHASE2:Hg19::chrX:106146585..106146594,-#_97b215a885eb09efd15b51a8d5446d09p2@RIPPLY1
6.24e-88FFCP PHASE1:Hg19::chr2:210798666..210798677,+#_8aa09d076864b1e0f981b6bf59a2548ap@chr2:210798666..210798677, +
6.24e-88FFCP PHASE2:Hg19::chr2:210798666..210798677,+#_8aa09d076864b1e0f981b6bf59a2548ap@chr2:210798666..210798677, +
1.52e-87FFCP PHASE2:Hg19::chr13:36052713..36052724,-#_9ad53be5b2696622b3f51f48035547e4p@chr13:36052713..36052724, -
1.52e-87FFCP PHASE1:Hg19::chr13:36052713..36052724,-#_9ad53be5b2696622b3f51f48035547e4p@chr13:36052713..36052724, -
4.06e-85FFCP PHASE1:Hg19::chr11:27240276..27240289,-#_248f96cd241f117204312c5f6e9cc9ccp1@ENST00000526061
4.06e-85FFCP PHASE2:Hg19::chr11:27240276..27240289,-#_248f96cd241f117204312c5f6e9cc9ccp1@ENST00000526061
9.61e-85FFCP PHASE1:Hg19::chr10:91294399..91294401,-#_a39204efccbc72380ff4dbefd6d23951p@chr10:91294399..91294401, -
9.61e-85FFCP PHASE2:Hg19::chr10:91294399..91294401,-#_a39204efccbc72380ff4dbefd6d23951p@chr10:91294399..91294401, -
1.28e-84FFCP PHASE1:Hg19::chr8:53853672..53853682,-#_1e7e0a04362c2d39d7ca9aa3971881f7p1@BC033145
1.28e-84FFCP PHASE2:Hg19::chr8:53853672..53853682,-#_1e7e0a04362c2d39d7ca9aa3971881f7p1@BC033145
4.72e-75FFCP PHASE1:Hg19::chr2:45166478..45166502,-#_d66881573e3fc68191a1ac9dfd654e10p3@ENST00000437916
4.72e-75FFCP PHASE2:Hg19::chr2:45166478..45166502,-#_d66881573e3fc68191a1ac9dfd654e10p3@ENST00000437916
1.66e-74FFCP PHASE1:Hg19::chr8:94713146..94713159,+#_cd54d011bcaa386bcc71995a52b655dfp8@FAM92A1
1.66e-74FFCP PHASE2:Hg19::chr8:94713146..94713159,+#_cd54d011bcaa386bcc71995a52b655dfp8@FAM92A1
2.75e-74FFCP PHASE2:Hg19::chr4:183006122..183006131,-#_850b72408e42196574b92069b042c30dp3@ENST00000505537
2.75e-74FFCP PHASE1:Hg19::chr4:183006122..183006131,-#_850b72408e42196574b92069b042c30dp3@ENST00000505537
7.85e-67FFCP PHASE2:Hg19::chr3:110846331..110846333,+#_12112cac98dc75bdc14babc104ea2dd5p@chr3:110846331..110846333, +
7.85e-67FFCP PHASE1:Hg19::chr3:110846331..110846333,+#_12112cac98dc75bdc14babc104ea2dd5p@chr3:110846331..110846333, +
9.82e-67FFCP PHASE2:Hg19::chr2:237677787..237677800,+#_fca034072a5e6b17e04cc57a37701603p@chr2:237677787..237677800, +
9.82e-67FFCP PHASE1:Hg19::chr2:237677787..237677800,+#_fca034072a5e6b17e04cc57a37701603p@chr2:237677787..237677800, +
1.54e-66FFCP PHASE2:Hg19::chr11:89224826..89224839,-#_5856f47e99a8a17e2d9ea13afcc3cad5p14@NOX4
1.54e-66FFCP PHASE1:Hg19::chr11:89224826..89224839,-#_5856f47e99a8a17e2d9ea13afcc3cad5p14@NOX4
1.71e-66FFCP PHASE2:Hg19::chr1:218579326..218579337,+#_471b078a1c44c4c0ba305081421e8044p@chr1:218579326..218579337, +
1.71e-66FFCP PHASE1:Hg19::chr1:218579326..218579337,+#_471b078a1c44c4c0ba305081421e8044p@chr1:218579326..218579337, +
2.39e-66FFCP PHASE2:Hg19::chr19:30716539..30716546,+#_a7f0f53dbac0130af80f95418970ddbdp@chr19:30716539..30716546, +
2.39e-66FFCP PHASE2:Hg19::chr2:63196015..63196016,+#_a7f0f53dbac0130af80f95418970ddbdp@chr2:63196015..63196016, +
2.39e-66FFCP PHASE1:Hg19::chr2:63196015..63196016,+#_a7f0f53dbac0130af80f95418970ddbdp@chr2:63196015..63196016, +
2.39e-66FFCP PHASE1:Hg19::chr19:30716539..30716546,+#_a7f0f53dbac0130af80f95418970ddbdp@chr19:30716539..30716546, +
2.4e-66FFCP PHASE1:Hg19::chr7:115723897..115723915,-#_46d8e49f2ba811425e829a8382912c6e-, p@chr7:115723897..115723915
2.4e-66FFCP PHASE2:Hg19::chr7:115723897..115723915,-#_46d8e49f2ba811425e829a8382912c6ep@chr7:115723897..115723915, -
2.41e-66FFCP PHASE1:Hg19::chr3:139258648..139258667,+#_2626135cfc3973404057d936967656aap1@ENST00000381790
2.41e-66FFCP PHASE2:Hg19::chr3:139258648..139258667,+#_2626135cfc3973404057d936967656aap1@ENST00000381790
3.35e-66FFCP PHASE2:Hg19::chr15:79501729..79501736,+#_28b8d26f5e6b1a9f3044eb351db414ffp1@MIR184
3.35e-66FFCP PHASE1:Hg19::chr15:79501729..79501736,+#_28b8d26f5e6b1a9f3044eb351db414ffp1@MIR184
4.68e-66FFCP PHASE2:Hg19::chr3:50191610..50191612,-#_c2adc09eb898ba704c976b2d0dc4639dp@chr3:50191610..50191612, -
4.68e-66FFCP PHASE1:Hg19::chr3:50191610..50191612,-#_c2adc09eb898ba704c976b2d0dc4639dp@chr3:50191610..50191612, -
6.53e-66FFCP PHASE2:Hg19::chr1:12416343..12416350,+#_8dd3c90200b5fc5886cfca8e03a258c1+, p@chr1:12416343..12416350
6.53e-66FFCP PHASE2:Hg19::chrX:106142727..106142730,-#_8dd3c90200b5fc5886cfca8e03a258c1p@chrX:106142727..106142730, -
6.53e-66FFCP PHASE1:Hg19::chr1:12416343..12416350,+#_8dd3c90200b5fc5886cfca8e03a258c1p@chr1:12416343..12416350, +
6.53e-66FFCP PHASE1:Hg19::chrX:106142727..106142730,-#_8dd3c90200b5fc5886cfca8e03a258c1p@chrX:106142727..106142730, -
2.43e-60FFCP PHASE2:Hg19::chr5:31235359..31235362,+#_8ead782320e4fc69206a8c5a62735710p@chr5:31235359..31235362, +
2.43e-60FFCP PHASE1:Hg19::chr5:31235359..31235362,+#_8ead782320e4fc69206a8c5a62735710p@chr5:31235359..31235362, +
8.17e-60FFCP PHASE1:Hg19::chr3:150690508..150690520,-#_f4fd2f13d649d2cf0dd6ec22a6ba5337p1@CLRN1
8.17e-60FFCP PHASE2:Hg19::chr3:150690508..150690520,-#_f4fd2f13d649d2cf0dd6ec22a6ba5337p1@CLRN1
2.73e-59FFCP PHASE2:Hg19::chr8:124692287..124692298,+#_8027d81a78da4865c3ac955a73b4f34cp@chr8:124692287..124692298, +
2.73e-59FFCP PHASE1:Hg19::chr8:124692287..124692298,+#_8027d81a78da4865c3ac955a73b4f34cp@chr8:124692287..124692298, +
2.4e-55FFCP PHASE1:Hg19::chr14:61654271..61654282,+#_2ea0909ef635cd847b35da47fc5b3018p30@PRKCH
2.4e-55FFCP PHASE2:Hg19::chr3:110888243..110888248,+#_2ea0909ef635cd847b35da47fc5b3018p@chr3:110888243..110888248, +
2.4e-55FFCP PHASE2:Hg19::chr14:61654271..61654282,+#_2ea0909ef635cd847b35da47fc5b3018p30@PRKCH
2.4e-55FFCP PHASE1:Hg19::chr3:110888243..110888248,+#_2ea0909ef635cd847b35da47fc5b3018p@chr3:110888243..110888248, +
7.24e-55FFCP PHASE2:Hg19::chr14:60975914..60975925,+#_9b3512d60cb401e4b95530e43f39d578p5@SIX6
7.24e-55FFCP PHASE1:Hg19::chr14:60975914..60975925,+#_9b3512d60cb401e4b95530e43f39d578p5@SIX6
1.25e-54FFCP PHASE2:Hg19::chr14:60981789..60981803,+#_9bb1b8697cd7266203da454f0ac64b28p1@ENST00000557618
1.25e-54FFCP PHASE1:Hg19::chr14:60981789..60981803,+#_9bb1b8697cd7266203da454f0ac64b28p1@ENST00000557618
3.76e-54FFCP PHASE1:Hg19::chr2:45168617..45168631,-#_0fa22a387ebb096e4b3d614d40300ad4p1@ENST00000456467
3.76e-54FFCP PHASE2:Hg19::chr2:45168617..45168631,-#_0fa22a387ebb096e4b3d614d40300ad4p1@ENST00000456467
1.68e-53FFCP PHASE2:Hg19::chr7:115723925..115723935,-#_358ce03060be933824d406fb2dd153afp@chr7:115723925..115723935, -
1.68e-53FFCP PHASE1:Hg19::chr7:115723925..115723935,-#_358ce03060be933824d406fb2dd153afp@chr7:115723925..115723935, -
2.87e-53FFCP PHASE1:Hg19::chr4:169623845..169623853,+#_5c1eeba354b1e4377fea2a214f5611dap@chr4:169623845..169623853, +
2.87e-53FFCP PHASE1:Hg19::chr11:31671561..31671580,+#_5c1eeba354b1e4377fea2a214f5611dap@chr11:31671561..31671580, +
2.87e-53FFCP PHASE1:Hg19::chr2:35680607..35680613,-#_5c1eeba354b1e4377fea2a214f5611dap@chr2:35680607..35680613, -
2.87e-53FFCP PHASE2:Hg19::chr11:31671561..31671580,+#_5c1eeba354b1e4377fea2a214f5611dap@chr11:31671561..31671580, +
2.87e-53FFCP PHASE2:Hg19::chr4:169623845..169623853,+#_5c1eeba354b1e4377fea2a214f5611dap@chr4:169623845..169623853, +
2.87e-53FFCP PHASE2:Hg19::chr2:35680607..35680613,-#_5c1eeba354b1e4377fea2a214f5611dap@chr2:35680607..35680613, -
6.39e-53FFCP PHASE1:Hg19::chr7:131803806..131803815,+#_1a21e1623f31f741843f3a1924010c29p@chr7:131803806..131803815, +
6.39e-53FFCP PHASE2:Hg19::chr7:131803806..131803815,+#_1a21e1623f31f741843f3a1924010c29p@chr7:131803806..131803815, +
1.14e-50FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_b75d258c8a4f90f1561d9763d81edd9ap7@PTPRU
1.14e-50FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_b75d258c8a4f90f1561d9763d81edd9ap7@PTPRU
1.89e-50FFCP PHASE1:Hg19::chr13:94028319..94028321,+#_9d91a5f64eeb99a7be870be6507df9acp@chr13:94028319..94028321, +
1.89e-50FFCP PHASE2:Hg19::chr13:94028319..94028321,+#_9d91a5f64eeb99a7be870be6507df9acp@chr13:94028319..94028321, +
4.05e-47FFCP PHASE2:Hg19::chr2:66670833..66670853,+#_886392a5d4cbd5bbff58b1557968872bp@chr2:66670833..66670853, +
4.05e-47FFCP PHASE1:Hg19::chr10:103990396..103990405,+#_886392a5d4cbd5bbff58b1557968872bp@chr10:103990396..103990405, +
4.05e-47FFCP PHASE1:Hg19::chr11:2973356..2973367,-#_886392a5d4cbd5bbff58b1557968872bp11@NAP1L4
4.05e-47FFCP PHASE2:Hg19::chr11:2973356..2973367,-#_886392a5d4cbd5bbff58b1557968872bp11@NAP1L4
4.05e-47FFCP PHASE2:Hg19::chr10:103990396..103990405,+#_886392a5d4cbd5bbff58b1557968872bp@chr10:103990396..103990405, +
4.05e-47FFCP PHASE1:Hg19::chr2:66670833..66670853,+#_886392a5d4cbd5bbff58b1557968872bp@chr2:66670833..66670853, +
8.84e-47FFCP PHASE2:Hg19::chr14:60975644..60975673,+#_c35b13b56332fe925ac9cea617d57907p3@SIX6
8.84e-47FFCP PHASE1:Hg19::chrX:106146562..106146577,-#_c35b13b56332fe925ac9cea617d57907p1@RIPPLY1
8.84e-47FFCP PHASE2:Hg19::chrX:106146562..106146577,-#_c35b13b56332fe925ac9cea617d57907p1@RIPPLY1
8.84e-47FFCP PHASE1:Hg19::chr14:60975644..60975673,+#_c35b13b56332fe925ac9cea617d57907p3@SIX6
1.21e-46FFCP PHASE1:Hg19::chr14:60975871..60975880,+#_9539ed97f622ada28278cdff8ee2cb5ep4@SIX6
1.21e-46FFCP PHASE1:Hg19::chr1:203463245..203463294,+#_9539ed97f622ada28278cdff8ee2cb5ep1@OPTC
1.21e-46FFCP PHASE2:Hg19::chr14:60975871..60975880,+#_9539ed97f622ada28278cdff8ee2cb5ep4@SIX6
1.21e-46FFCP PHASE2:Hg19::chr1:203463245..203463294,+#_9539ed97f622ada28278cdff8ee2cb5ep1@OPTC
4.17e-46FFCP PHASE2:Hg19::chr13:36050976..36050990,+#_afeb2fe8dd60bf09f87c2f530b357712p8@NBEA
4.17e-46FFCP PHASE1:Hg19::chr13:36050976..36050990,+#_afeb2fe8dd60bf09f87c2f530b357712p8@NBEA