Personal tools

CL:0002360

From FANTOM5_SSTAR

Jump to: navigation, search
Name:AGM hematopoietic stem cell
Namespace:FANTOM
Definition:"A hematopoietic stem cell from the aorta-gonad-mesonephros region of the developing embryo. First seen at E10.5 in mouse embryos. May give rise to fetal liver HSC." [GOC:tfm, ISBN:978-1-60327-346-6]
Created by:tmeehan
Creation date:2010-09-22T10:31:49Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0002352(gestational hematopoietic stem cell)



Children


is a:FF:11949-126B5 (hematopoietic stem cell, aorta-gonad-mesonephros (AGM) region derived, embryo E10.5)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11949-126B5 (hematopoietic stem cell, aorta-gonad-mesonephros (AGM) region derived, embryo E10.5)

Mouse (Mus musculus)

  • 11949-126B5 (hematopoietic stem cell, aorta-gonad-mesonephros (AGM) region derived, embryo E10.5)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002360 (AGM hematopoietic stem cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


No analysis results for this cluster