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CL:0002372

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Name:myotube
Namespace:FANTOM
Definition:"A myotube is a multinucleated cells that is formed when proliferating myoblasts exit the cell cycle, differentiate and fuse." [GOC:tfm, ISBN:0323052908]
Synonyms: "myotubule" EXACT []
"single cell sarcomere" EXACT []
"skeletal muscle fiber" EXACT []
Alt_id: CL:0000369
Created by:tmeehan
Creation date:2010-09-24T01:13:01Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000228(multinucleate cell),CL:0000737(striated muscle cell)
develops_from:CL:0000515(skeletal muscle myoblast)



Children


is a:FF:0000163 (myotubule derived from skeletal muscle cells)
derives from:FF:0104975 (human myotube cell sample),FF:0200006 (myoblast differentiation to myotubes, control sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002372 (myotube), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
9.37e-99FFCP PHASE2:Hg19::chr8:106331633..106331642,+#_241ad9f2367a791451b2079501d6c856p15@ZFPM2
9.37e-99FFCP PHASE1:Hg19::chr8:106331633..106331642,+#_241ad9f2367a791451b2079501d6c856p15@ZFPM2
2.55e-98FFCP PHASE1:Hg19::chr1:186166946..186166955,-#_1f124d5461040fb9dd217358fe14b0b2p@chr1:186166946..186166955, -
2.55e-98FFCP PHASE1:Hg19::chr9:21496498..21496503,-#_1f124d5461040fb9dd217358fe14b0b2p@chr9:21496498..21496503, -
2.55e-98FFCP PHASE2:Hg19::chr4:130278144..130278146,+#_1f124d5461040fb9dd217358fe14b0b2p@chr4:130278144..130278146, +
2.55e-98FFCP PHASE1:Hg19::chr13:43938419..43938424,-#_1f124d5461040fb9dd217358fe14b0b2p@chr13:43938419..43938424, -
2.55e-98FFCP PHASE1:Hg19::chr4:130278144..130278146,+#_1f124d5461040fb9dd217358fe14b0b2p@chr4:130278144..130278146, +
2.55e-98FFCP PHASE1:Hg19::chr12:54379011..54379016,+#_1f124d5461040fb9dd217358fe14b0b2p15@HOXC10
2.55e-98FFCP PHASE2:Hg19::chr9:21496498..21496503,-#_1f124d5461040fb9dd217358fe14b0b2-, p@chr9:21496498..21496503
2.55e-98FFCP PHASE2:Hg19::chr12:54379011..54379016,+#_1f124d5461040fb9dd217358fe14b0b2p15@HOXC10
2.55e-98FFCP PHASE1:Hg19::chr4:26143606..26143611,+#_1f124d5461040fb9dd217358fe14b0b2p@chr4:26143606..26143611, +
2.55e-98FFCP PHASE2:Hg19::chr1:186166946..186166955,-#_1f124d5461040fb9dd217358fe14b0b2p@chr1:186166946..186166955, -
2.55e-98FFCP PHASE2:Hg19::chr13:43938419..43938424,-#_1f124d5461040fb9dd217358fe14b0b2p@chr13:43938419..43938424, -
2.55e-98FFCP PHASE2:Hg19::chr4:26143606..26143611,+#_1f124d5461040fb9dd217358fe14b0b2p@chr4:26143606..26143611, +
1.23e-66FFCP PHASE2:Hg19::chr7:112635723..112635728,-#_bfe7d799f8f18e5fe2e25dc774082245p4@ENST00000451962
1.23e-66FFCP PHASE2:Hg19::chr2:224839996..224840004,-#_bfe7d799f8f18e5fe2e25dc774082245p46@SERPINE2
1.23e-66FFCP PHASE1:Hg19::chr7:112635723..112635728,-#_bfe7d799f8f18e5fe2e25dc774082245p4@ENST00000451962
1.23e-66FFCP PHASE1:Hg19::chr2:224839996..224840004,-#_bfe7d799f8f18e5fe2e25dc774082245p46@SERPINE2
2.39e-66FFCP PHASE2:Hg19::chr5:52288160..52288176,+#_55831c27f6467d4f9f4af86633ae302dp@chr5:52288160..52288176, +
2.39e-66FFCP PHASE2:Hg19::chr18:67872642..67872645,-#_55831c27f6467d4f9f4af86633ae302dp@chr18:67872642..67872645, -
2.39e-66FFCP PHASE1:Hg19::chr5:52288160..52288176,+#_55831c27f6467d4f9f4af86633ae302dp@chr5:52288160..52288176, +
2.39e-66FFCP PHASE2:Hg19::chr13:99963626..99963628,-#_55831c27f6467d4f9f4af86633ae302dp@chr13:99963626..99963628, -
2.39e-66FFCP PHASE1:Hg19::chr4:188050642..188050645,+#_55831c27f6467d4f9f4af86633ae302dp@chr4:188050642..188050645, +
2.39e-66FFCP PHASE2:Hg19::chr4:188050642..188050645,+#_55831c27f6467d4f9f4af86633ae302dp@chr4:188050642..188050645, +
2.39e-66FFCP PHASE1:Hg19::chr18:67872642..67872645,-#_55831c27f6467d4f9f4af86633ae302dp@chr18:67872642..67872645, -
2.39e-66FFCP PHASE1:Hg19::chr13:99963626..99963628,-#_55831c27f6467d4f9f4af86633ae302dp@chr13:99963626..99963628, -
4.66e-66FFCP PHASE1:Hg19::chr16:2811988..2811995,+#_97282cd26f7683548bd4e01d285b5257p@chr16:2811988..2811995, +
4.66e-66FFCP PHASE2:Hg19::chr4:86954525..86954527,+#_97282cd26f7683548bd4e01d285b5257p@chr4:86954525..86954527, +
4.66e-66FFCP PHASE2:Hg19::chr16:2811988..2811995,+#_97282cd26f7683548bd4e01d285b5257p@chr16:2811988..2811995, +
4.66e-66FFCP PHASE1:Hg19::chr7:7222449..7222458,+#_97282cd26f7683548bd4e01d285b5257p10@C1GALT1
4.66e-66FFCP PHASE2:Hg19::chr7:7222449..7222458,+#_97282cd26f7683548bd4e01d285b5257p10@C1GALT1
4.66e-66FFCP PHASE2:Hg19::chr11:92616200..92616202,+#_97282cd26f7683548bd4e01d285b5257p4@FAT3
4.66e-66FFCP PHASE1:Hg19::chr11:92616200..92616202,+#_97282cd26f7683548bd4e01d285b5257p4@FAT3
4.66e-66FFCP PHASE1:Hg19::chr4:86954525..86954527,+#_97282cd26f7683548bd4e01d285b5257p@chr4:86954525..86954527, +
2.42e-50FFCP PHASE1:Hg19::chr18:19769123..19769149,+#_2c673edc7190e6a11e4b6a2df00bb4e1p@chr18:19769123..19769149, +
2.42e-50FFCP PHASE1:Hg19::chr2:30865226..30865229,+#_2c673edc7190e6a11e4b6a2df00bb4e1p17@LCLAT1
2.42e-50FFCP PHASE1:Hg19::chr1:78353898..78353908,+#_2c673edc7190e6a11e4b6a2df00bb4e1p24@NEXN
2.42e-50FFCP PHASE1:Hg19::chr7:91874538..91874551,-#_2c673edc7190e6a11e4b6a2df00bb4e1p13@KRIT1
2.42e-50FFCP PHASE2:Hg19::chr11:64774372..64774383,-#_2c673edc7190e6a11e4b6a2df00bb4e1p@chr11:64774372..64774383, -
2.42e-50FFCP PHASE2:Hg19::chr18:19769123..19769149,+#_2c673edc7190e6a11e4b6a2df00bb4e1p@chr18:19769123..19769149, +
2.42e-50FFCP PHASE2:Hg19::chr15:80352456..80352465,+#_2c673edc7190e6a11e4b6a2df00bb4e1p10@ZFAND6
2.42e-50FFCP PHASE1:Hg19::chr11:64774372..64774383,-#_2c673edc7190e6a11e4b6a2df00bb4e1p@chr11:64774372..64774383, -
2.42e-50FFCP PHASE2:Hg19::chr2:30865226..30865229,+#_2c673edc7190e6a11e4b6a2df00bb4e1p17@LCLAT1
2.42e-50FFCP PHASE1:Hg19::chr15:80352456..80352465,+#_2c673edc7190e6a11e4b6a2df00bb4e1p10@ZFAND6
2.42e-50FFCP PHASE2:Hg19::chr7:91874538..91874551,-#_2c673edc7190e6a11e4b6a2df00bb4e1p13@KRIT1
2.42e-50FFCP PHASE2:Hg19::chr1:78353898..78353908,+#_2c673edc7190e6a11e4b6a2df00bb4e1p24@NEXN
3.99e-50FFCP PHASE2:Hg19::chr11:117152220..117152232,+#_0d129808a327bf2d0cb52f5803dc3355p11@RNF214
3.99e-50FFCP PHASE1:Hg19::chr3:114061988..114061990,-#_0d129808a327bf2d0cb52f5803dc3355p@chr3:114061988..114061990, -
3.99e-50FFCP PHASE1:Hg19::chr13:26312285..26312294,+#_0d129808a327bf2d0cb52f5803dc3355p@chr13:26312285..26312294, +
3.99e-50FFCP PHASE1:Hg19::chr11:117152220..117152232,+#_0d129808a327bf2d0cb52f5803dc3355p11@RNF214
3.99e-50FFCP PHASE1:Hg19::chrX:69722913..69722915,+#_0d129808a327bf2d0cb52f5803dc3355p@chrX:69722913..69722915, +
3.99e-50FFCP PHASE1:Hg19::chr12:89919893..89919905,-#_0d129808a327bf2d0cb52f5803dc3355p6@POC1B-GALNT4
3.99e-50FFCP PHASE1:Hg19::chr5:131892954..131892969,+#_0d129808a327bf2d0cb52f5803dc3355p9@RAD50
3.99e-50FFCP PHASE2:Hg19::chr7:7595050..7595057,-#_0d129808a327bf2d0cb52f5803dc3355p@chr7:7595050..7595057, -
3.99e-50FFCP PHASE1:Hg19::chr8:107561486..107561489,+#_0d129808a327bf2d0cb52f5803dc3355p@chr8:107561486..107561489, +
3.99e-50FFCP PHASE2:Hg19::chrX:69722913..69722915,+#_0d129808a327bf2d0cb52f5803dc3355p@chrX:69722913..69722915, +
3.99e-50FFCP PHASE2:Hg19::chr4:110434870..110434880,+#_0d129808a327bf2d0cb52f5803dc3355p@chr4:110434870..110434880, +
3.99e-50FFCP PHASE2:Hg19::chr4:6592942..6592947,-#_0d129808a327bf2d0cb52f5803dc3355p@chr4:6592942..6592947, -
3.99e-50FFCP PHASE1:Hg19::chr4:6592942..6592947,-#_0d129808a327bf2d0cb52f5803dc3355p@chr4:6592942..6592947, -
3.99e-50FFCP PHASE2:Hg19::chr5:131892954..131892969,+#_0d129808a327bf2d0cb52f5803dc3355p9@RAD50
3.99e-50FFCP PHASE2:Hg19::chr3:114061988..114061990,-#_0d129808a327bf2d0cb52f5803dc3355p@chr3:114061988..114061990, -
3.99e-50FFCP PHASE1:Hg19::chr7:7595050..7595057,-#_0d129808a327bf2d0cb52f5803dc3355p@chr7:7595050..7595057, -
3.99e-50FFCP PHASE2:Hg19::chr9:114720368..114720377,-#_0d129808a327bf2d0cb52f5803dc3355p@chr9:114720368..114720377, -
3.99e-50FFCP PHASE1:Hg19::chr4:110434870..110434880,+#_0d129808a327bf2d0cb52f5803dc3355p@chr4:110434870..110434880, +
3.99e-50FFCP PHASE2:Hg19::chr13:26312285..26312294,+#_0d129808a327bf2d0cb52f5803dc3355+, p@chr13:26312285..26312294
3.99e-50FFCP PHASE2:Hg19::chr12:89919893..89919905,-#_0d129808a327bf2d0cb52f5803dc3355p6@POC1B-GALNT4
3.99e-50FFCP PHASE1:Hg19::chr18:55922965..55922972,+#_0d129808a327bf2d0cb52f5803dc3355p@chr18:55922965..55922972, +
3.99e-50FFCP PHASE1:Hg19::chr9:114720368..114720377,-#_0d129808a327bf2d0cb52f5803dc3355p@chr9:114720368..114720377, -
3.99e-50FFCP PHASE2:Hg19::chr18:55922965..55922972,+#_0d129808a327bf2d0cb52f5803dc3355+, p@chr18:55922965..55922972
3.99e-50FFCP PHASE2:Hg19::chr8:107561486..107561489,+#_0d129808a327bf2d0cb52f5803dc3355p@chr8:107561486..107561489, +
6.58e-50FFCP PHASE1:Hg19::chr15:35796430..35796456,-#_68e9ae2bccfcdc06fa01b0c80e604ea3p@chr15:35796430..35796456, -
6.58e-50FFCP PHASE2:Hg19::chr11:123362263..123362276,+#_68e9ae2bccfcdc06fa01b0c80e604ea3p@chr11:123362263..123362276, +
6.58e-50FFCP PHASE2:Hg19::chr15:35796430..35796456,-#_68e9ae2bccfcdc06fa01b0c80e604ea3p@chr15:35796430..35796456, -
6.58e-50FFCP PHASE1:Hg19::chr11:123362263..123362276,+#_68e9ae2bccfcdc06fa01b0c80e604ea3p@chr11:123362263..123362276, +
6.58e-50FFCP PHASE2:Hg19::chr12:112451000..112451011,-#_68e9ae2bccfcdc06fa01b0c80e604ea3p7@TMEM116
6.58e-50FFCP PHASE1:Hg19::chr7:63560612..63560634,+#_68e9ae2bccfcdc06fa01b0c80e604ea3p1@GUSBP6
6.58e-50FFCP PHASE2:Hg19::chr7:63560612..63560634,+#_68e9ae2bccfcdc06fa01b0c80e604ea3p1@GUSBP6
6.58e-50FFCP PHASE1:Hg19::chr21:46420365..46420376,+#_68e9ae2bccfcdc06fa01b0c80e604ea3p@chr21:46420365..46420376, +
6.58e-50FFCP PHASE1:Hg19::chr12:112451000..112451011,-#_68e9ae2bccfcdc06fa01b0c80e604ea3p7@TMEM116
6.58e-50FFCP PHASE2:Hg19::chr21:46420365..46420376,+#_68e9ae2bccfcdc06fa01b0c80e604ea3p@chr21:46420365..46420376, +
9.91e-41FFCP PHASE2:Hg19::chr21:35340759..35340770,-#_2277549a7cf9d2d178064a7534972223p@chr21:35340759..35340770, -
9.91e-41FFCP PHASE2:Hg19::chr12:31882130..31882150,-#_2277549a7cf9d2d178064a7534972223p4@AMN1
9.91e-41FFCP PHASE1:Hg19::chr12:31882130..31882150,-#_2277549a7cf9d2d178064a7534972223p4@AMN1
9.91e-41FFCP PHASE2:Hg19::chr3:51345332..51345335,+#_2277549a7cf9d2d178064a7534972223p@chr3:51345332..51345335, +
9.91e-41FFCP PHASE1:Hg19::chr3:51345332..51345335,+#_2277549a7cf9d2d178064a7534972223p@chr3:51345332..51345335, +
9.91e-41FFCP PHASE1:Hg19::chr21:35340759..35340770,-#_2277549a7cf9d2d178064a7534972223p@chr21:35340759..35340770, -
1.48e-40FFCP PHASE2:Hg19::chr15:41786087..41786090,+#_e0fe45c565c5d04139547e1c0ed69e38p8@ITPKA
1.48e-40FFCP PHASE1:Hg19::chr4:187526365..187526370,-#_e0fe45c565c5d04139547e1c0ed69e38p@chr4:187526365..187526370, -
1.48e-40FFCP PHASE2:Hg19::chr4:187526365..187526370,-#_e0fe45c565c5d04139547e1c0ed69e38-, p@chr4:187526365..187526370
1.48e-40FFCP PHASE2:Hg19::chr7:92213359..92213360,-#_e0fe45c565c5d04139547e1c0ed69e38p@chr7:92213359..92213360, -
1.48e-40FFCP PHASE1:Hg19::chr19:50529329..50529340,+#_e0fe45c565c5d04139547e1c0ed69e38p6@ZNF473
1.48e-40FFCP PHASE1:Hg19::chr4:28866276..28866280,+#_e0fe45c565c5d04139547e1c0ed69e38p@chr4:28866276..28866280, +
1.48e-40FFCP PHASE2:Hg19::chr11:35110037..35110046,+#_e0fe45c565c5d04139547e1c0ed69e38p@chr11:35110037..35110046, +
1.48e-40FFCP PHASE2:Hg19::chr4:28866276..28866280,+#_e0fe45c565c5d04139547e1c0ed69e38p@chr4:28866276..28866280, +
1.48e-40FFCP PHASE1:Hg19::chr11:35110037..35110046,+#_e0fe45c565c5d04139547e1c0ed69e38p@chr11:35110037..35110046, +
1.48e-40FFCP PHASE1:Hg19::chr7:92213359..92213360,-#_e0fe45c565c5d04139547e1c0ed69e38p@chr7:92213359..92213360, -
1.48e-40FFCP PHASE2:Hg19::chr19:50529329..50529340,+#_e0fe45c565c5d04139547e1c0ed69e38p6@ZNF473
1.48e-40FFCP PHASE1:Hg19::chr15:41786087..41786090,+#_e0fe45c565c5d04139547e1c0ed69e38p8@ITPKA
1.48e-40FFCP PHASE2:Hg19::chr3:173650372..173650378,-#_e0fe45c565c5d04139547e1c0ed69e38-, p@chr3:173650372..173650378
1.48e-40FFCP PHASE1:Hg19::chr3:173650372..173650378,-#_e0fe45c565c5d04139547e1c0ed69e38p@chr3:173650372..173650378, -