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CL:0002536

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Name:amniotic epithelial cell
Namespace:FANTOM
Definition:"An epithelial cell that is part of the amnion." [GOC:tfm]
Created by:tmeehan
Creation date:2011-02-28T12:38:01Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000066(epithelial cell),CL:0000349(extraembryonic cell)
part_of:UBERON:0000305(amnion)



Children


derives from:FF:0000009 (human amniotic epithelial cell sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002536 (amniotic epithelial cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr1:209704633..209704641,+#_066c6329507c9b02a7fa29c4baa30956p@chr1:209704633..209704641, +
1.55e-98FFCP PHASE1:Hg19::chr1:209704633..209704641,+#_066c6329507c9b02a7fa29c4baa30956p@chr1:209704633..209704641, +
1.56e-79FFCP PHASE1:Hg19::chr1:209704648..209704656,+#_5b14b07f1f57f3e8ba1fff97c8aeefcap@chr1:209704648..209704656, +
1.56e-79FFCP PHASE2:Hg19::chr1:209704648..209704656,+#_5b14b07f1f57f3e8ba1fff97c8aeefcap@chr1:209704648..209704656, +
2.34e-79FFCP PHASE2:Hg19::chr1:209704573..209704587,+#_2c1fe1a394323c4373ff5791bc8a4058p@chr1:209704573..209704587, +
2.34e-79FFCP PHASE1:Hg19::chr1:209704573..209704587,+#_2c1fe1a394323c4373ff5791bc8a4058p@chr1:209704573..209704587, +
7.41e-67FFCP PHASE2:Hg19::chr1:209704612..209704625,+#_232755a05166b86418a430d82741a378+, p@chr1:209704612..209704625
7.41e-67FFCP PHASE1:Hg19::chr1:209704612..209704625,+#_232755a05166b86418a430d82741a378p@chr1:209704612..209704625, +
7.41e-67FFCP PHASE1:Hg19::chr2:161057428..161057450,-#_232755a05166b86418a430d82741a378p@chr2:161057428..161057450, -
7.41e-67FFCP PHASE2:Hg19::chr2:161057428..161057450,-#_232755a05166b86418a430d82741a378p@chr2:161057428..161057450, -
1.04e-66FFCP PHASE1:Hg19::chr3:55384353..55384357,+#_f17000615815df2c43829a18b9d3df17p@chr3:55384353..55384357, +
1.04e-66FFCP PHASE2:Hg19::chr3:55384353..55384357,+#_f17000615815df2c43829a18b9d3df17p@chr3:55384353..55384357, +
2.84e-66FFCP PHASE2:Hg19::chr5:89143573..89143607,-#_659202826281678384e47799a903b431p@chr5:89143573..89143607, -
2.84e-66FFCP PHASE1:Hg19::chr5:89143573..89143607,-#_659202826281678384e47799a903b431p@chr5:89143573..89143607, -
1.08e-65FFCP PHASE2:Hg19::chr19:1584972..1584977,-#_edc04fbf55195b5d2f965523afd97e62p5@M77818
1.08e-65FFCP PHASE1:Hg19::chr19:1584972..1584977,-#_edc04fbf55195b5d2f965523afd97e62p5@M77818
2.02e-57FFCP PHASE2:Hg19::chr5:170176045..170176055,-#_bdcb9523b1d4a008b98eaa654ce7d475p@chr5:170176045..170176055, -
2.02e-57FFCP PHASE1:Hg19::chr5:170176045..170176055,-#_bdcb9523b1d4a008b98eaa654ce7d475p@chr5:170176045..170176055, -
3.58e-57FFCP PHASE1:Hg19::chr2:237683020..237683029,+#_f4ff4dc7955060186c44401c3466c706p@chr2:237683020..237683029, +
3.58e-57FFCP PHASE2:Hg19::chr2:237683020..237683029,+#_f4ff4dc7955060186c44401c3466c706+, p@chr2:237683020..237683029
3.58e-57FFCP PHASE1:Hg19::chr2:237683109..237683120,+#_f4ff4dc7955060186c44401c3466c706p@chr2:237683109..237683120, +
3.58e-57FFCP PHASE2:Hg19::chr2:237683109..237683120,+#_f4ff4dc7955060186c44401c3466c706p@chr2:237683109..237683120, +
4.77e-57FFCP PHASE2:Hg19::chr9:88126069..88126080,-#_2fd07104c77a4dd9a5f8ce4607577557-, p@chr9:88126069..88126080
4.77e-57FFCP PHASE1:Hg19::chr9:88126069..88126080,-#_2fd07104c77a4dd9a5f8ce4607577557p@chr9:88126069..88126080, -
6.36e-57FFCP PHASE1:Hg19::chr8:29452974..29452996,+#_81dd2bc5e11f842f462c65894afa1975+, p@chr8:29452974..29452996
6.36e-57FFCP PHASE2:Hg19::chr8:29452974..29452996,+#_81dd2bc5e11f842f462c65894afa1975p@chr8:29452974..29452996, +
8.47e-57FFCP PHASE2:Hg19::chr20:61288249..61288259,+#_3fb0c195c6b05980a399fd4878bf8ac7p12@SLCO4A1
8.47e-57FFCP PHASE2:Hg19::chrX:48374277..48374289,+#_3fb0c195c6b05980a399fd4878bf8ac7p@chrX:48374277..48374289, +
8.47e-57FFCP PHASE1:Hg19::chr14:104202639..104202646,-#_3fb0c195c6b05980a399fd4878bf8ac7p@chr14:104202639..104202646, -
8.47e-57FFCP PHASE1:Hg19::chr5:170239966..170239982,+#_3fb0c195c6b05980a399fd4878bf8ac7p@chr5:170239966..170239982, +
8.47e-57FFCP PHASE1:Hg19::chr20:61288249..61288259,+#_3fb0c195c6b05980a399fd4878bf8ac7p12@SLCO4A1
8.47e-57FFCP PHASE1:Hg19::chrX:48374277..48374289,+#_3fb0c195c6b05980a399fd4878bf8ac7p@chrX:48374277..48374289, +
8.47e-57FFCP PHASE2:Hg19::chr5:170239966..170239982,+#_3fb0c195c6b05980a399fd4878bf8ac7p@chr5:170239966..170239982, +
8.47e-57FFCP PHASE2:Hg19::chr14:104202639..104202646,-#_3fb0c195c6b05980a399fd4878bf8ac7-, p@chr14:104202639..104202646
1.13e-56FFCP PHASE1:Hg19::chr10:131344593..131344605,+#_741355b57dfbacd07edf7295c0f5005dp@chr10:131344593..131344605, +
1.13e-56FFCP PHASE2:Hg19::chr10:131344593..131344605,+#_741355b57dfbacd07edf7295c0f5005dp@chr10:131344593..131344605, +
8.82e-51FFCP PHASE2:Hg19::chr2:95983133..95983144,+#_c70ef0730ec46954e2f5e1ff273dbcacp@chr2:95983133..95983144, +
8.82e-51FFCP PHASE1:Hg19::chr2:95983133..95983144,+#_c70ef0730ec46954e2f5e1ff273dbcacp@chr2:95983133..95983144, +
2.42e-50FFCP PHASE1:Hg19::chr2:237683203..237683210,+#_2b1449cf9d62cdb046a61eb0a9ddcb63p@chr2:237683203..237683210, +
2.42e-50FFCP PHASE2:Hg19::chr2:237683203..237683210,+#_2b1449cf9d62cdb046a61eb0a9ddcb63+, p@chr2:237683203..237683210
2.74e-50FFCP PHASE2:Hg19::chr12:8802094..8802097,-#_c713ba9fb5613e4d534ddc59676044c0p@chr12:8802094..8802097, -
2.74e-50FFCP PHASE1:Hg19::chr12:8802094..8802097,-#_c713ba9fb5613e4d534ddc59676044c0p@chr12:8802094..8802097, -
4.0e-50FFCP PHASE1:Hg19::chr11:5626359..5626406,+#_456505379a7a29f6ba9d31375dfc9e81p8@TRIM6
4.0e-50FFCP PHASE2:Hg19::chr11:5626359..5626406,+#_456505379a7a29f6ba9d31375dfc9e81p8@TRIM6
5.15e-50FFCP PHASE1:Hg19::chr3:146323019..146323049,-#_543b761cb5504eac123d87f8fb6d5826p1@PLSCR5
5.15e-50FFCP PHASE1:Hg19::chr4:177592751..177592777,-#_543b761cb5504eac123d87f8fb6d5826-, p@chr4:177592751..177592777
5.15e-50FFCP PHASE2:Hg19::chr4:177592751..177592777,-#_543b761cb5504eac123d87f8fb6d5826p@chr4:177592751..177592777, -
5.15e-50FFCP PHASE2:Hg19::chr3:146323019..146323049,-#_543b761cb5504eac123d87f8fb6d5826p1@PLSCR5
1.22e-44FFCP PHASE2:Hg19::chr19:36592910..36592917,+#_67bc33a05364f2f9c2856ccbd0ca46a3p@chr19:36592910..36592917, +
1.22e-44FFCP PHASE1:Hg19::chr3:123512689..123512717,-#_67bc33a05364f2f9c2856ccbd0ca46a3p36@MYLK
1.22e-44FFCP PHASE1:Hg19::chr2:25862154..25862172,-#_67bc33a05364f2f9c2856ccbd0ca46a3p14@DTNB
1.22e-44FFCP PHASE2:Hg19::chr2:25862154..25862172,-#_67bc33a05364f2f9c2856ccbd0ca46a3p14@DTNB
1.22e-44FFCP PHASE2:Hg19::chr3:123512689..123512717,-#_67bc33a05364f2f9c2856ccbd0ca46a3p36@MYLK
1.22e-44FFCP PHASE1:Hg19::chr19:36592910..36592917,+#_67bc33a05364f2f9c2856ccbd0ca46a3p@chr19:36592910..36592917, +
2.98e-44FFCP PHASE1:Hg19::chr2:237682972..237682977,+#_4ab3695feee7face5e4d3ac51ca2f172p@chr2:237682972..237682977, +
2.98e-44FFCP PHASE2:Hg19::chr2:237682972..237682977,+#_4ab3695feee7face5e4d3ac51ca2f172p@chr2:237682972..237682977, +
3.72e-44FFCP PHASE1:Hg19::chr2:191897854..191897865,-#_17f858212328a22ff89c70ad8a2b5ff1p@chr2:191897854..191897865, -
3.72e-44FFCP PHASE2:Hg19::chr2:191897854..191897865,-#_17f858212328a22ff89c70ad8a2b5ff1p@chr2:191897854..191897865, -
8.98e-41FFCP PHASE2:Hg19::chr1:147232729..147232730,-#_f547c02980519224a6e5334fb1451b3ep9@GJA5
8.98e-41FFCP PHASE1:Hg19::chr15:72490099..72490109,-#_f547c02980519224a6e5334fb1451b3ep3@GRAMD2
8.98e-41FFCP PHASE2:Hg19::chr15:72490099..72490109,-#_f547c02980519224a6e5334fb1451b3ep3@GRAMD2
8.98e-41FFCP PHASE1:Hg19::chr1:147232729..147232730,-#_f547c02980519224a6e5334fb1451b3ep9@GJA5
1.34e-40FFCP PHASE1:Hg19::chr19:36592959..36592975,+#_bd4d8edeea314a2a5d3a590758a9cc10p@chr19:36592959..36592975, +
1.34e-40FFCP PHASE2:Hg19::chr19:36592959..36592975,+#_bd4d8edeea314a2a5d3a590758a9cc10p@chr19:36592959..36592975, +
1.34e-40FFCP PHASE1:Hg19::chr2:237683038..237683048,+#_bd4d8edeea314a2a5d3a590758a9cc10p@chr2:237683038..237683048, +
1.34e-40FFCP PHASE2:Hg19::chr2:237683038..237683048,+#_bd4d8edeea314a2a5d3a590758a9cc10p@chr2:237683038..237683048, +
1.64e-40FFCP PHASE2:Hg19::chr17:38632125..38632156,-#_cf6afe7bbd2e6d3223e5e3ff012ff7b7p@chr17:38632125..38632156, -
1.64e-40FFCP PHASE1:Hg19::chr19:36592982..36592993,+#_cf6afe7bbd2e6d3223e5e3ff012ff7b7p@chr19:36592982..36592993, +
1.64e-40FFCP PHASE2:Hg19::chr19:36592982..36592993,+#_cf6afe7bbd2e6d3223e5e3ff012ff7b7p@chr19:36592982..36592993, +
1.64e-40FFCP PHASE1:Hg19::chr17:38632125..38632156,-#_cf6afe7bbd2e6d3223e5e3ff012ff7b7p@chr17:38632125..38632156, -
3.01e-40FFCP PHASE2:Hg19::chr18:6286777..6286797,+#_8df20f6d20e43de135437c69882e7d9d+, p@chr18:6286777..6286797
3.01e-40FFCP PHASE1:Hg19::chr18:6286777..6286797,+#_8df20f6d20e43de135437c69882e7d9dp@chr18:6286777..6286797, +
4.73e-37FFCP PHASE2:Hg19::chr16:81679150..81679182,+#_47973a2623425b908af566675d6a5fd9p17@CMIP
4.73e-37FFCP PHASE1:Hg19::chr16:81679150..81679182,+#_47973a2623425b908af566675d6a5fd9p17@CMIP
5.69e-37FFCP PHASE1:Hg19::chr2:28853455..28853476,+#_cd7c0a895cf9def9e902093af2564aa1p@chr2:28853455..28853476, +
5.69e-37FFCP PHASE2:Hg19::chr2:28853455..28853476,+#_cd7c0a895cf9def9e902093af2564aa1p@chr2:28853455..28853476, +
1.18e-36FFCP PHASE1:Hg19::chr6:12161831..12161855,+#_19857938300699242eace3c01a4c78bfp@chr6:12161831..12161855, +
1.18e-36FFCP PHASE2:Hg19::chr6:12161831..12161855,+#_19857938300699242eace3c01a4c78bfp@chr6:12161831..12161855, +
1.42e-36FFCP PHASE1:Hg19::chr2:75796837..75796849,-#_f5223f8cf79dd2f2e793304b95c6277ep6@FAM176A
1.42e-36FFCP PHASE1:Hg19::chr20:61287795..61287809,+#_f5223f8cf79dd2f2e793304b95c6277ep4@SLCO4A1
1.42e-36FFCP PHASE1:Hg19::chr2:62257232..62257274,+#_f5223f8cf79dd2f2e793304b95c6277ep@chr2:62257232..62257274, +
1.42e-36FFCP PHASE2:Hg19::chr2:75796837..75796849,-#_f5223f8cf79dd2f2e793304b95c6277ep6@FAM176A
1.42e-36FFCP PHASE2:Hg19::chr20:61287795..61287809,+#_f5223f8cf79dd2f2e793304b95c6277ep4@SLCO4A1
1.42e-36FFCP PHASE2:Hg19::chr2:62257232..62257274,+#_f5223f8cf79dd2f2e793304b95c6277ep@chr2:62257232..62257274, +
2.18e-34FFCP PHASE1:Hg19::chr2:237683156..237683171,+#_850526cb2172774dd8ab722526c65802p@chr2:237683156..237683171, +
2.18e-34FFCP PHASE2:Hg19::chr2:237683156..237683171,+#_850526cb2172774dd8ab722526c65802p@chr2:237683156..237683171, +
5.04e-34FFCP PHASE1:Hg19::chr5:170210042..170210086,-#_75fc1c951a91a3d1879fe7925d4136a5p@chr5:170210042..170210086, -
5.04e-34FFCP PHASE2:Hg19::chr5:170210042..170210086,-#_75fc1c951a91a3d1879fe7925d4136a5p@chr5:170210042..170210086, -
5.07e-34FFCP PHASE1:Hg19::chr5:153855212..153855222,-#_99d63b39d781b0b8fd0760ef0cc5e1a6p@chr5:153855212..153855222, -
5.07e-34FFCP PHASE2:Hg19::chr5:153855212..153855222,-#_99d63b39d781b0b8fd0760ef0cc5e1a6p@chr5:153855212..153855222, -
6.0e-34FFCP PHASE1:Hg19::chr2:43266741..43266748,-#_8262b961901ee30a9d8ec7657493b8ddp2@ENST00000449766
6.0e-34FFCP PHASE2:Hg19::chr2:43266741..43266748,-#_8262b961901ee30a9d8ec7657493b8ddp2@ENST00000449766
7.05e-34FFCP PHASE1:Hg19::chr14:61952109..61952155,+#_bd561f2bf9e80ab9125edb44eae7e4afp@chr14:61952109..61952155, +
7.05e-34FFCP PHASE2:Hg19::chr11:107729876..107729881,-#_bd561f2bf9e80ab9125edb44eae7e4afp10@SLC35F2
7.05e-34FFCP PHASE2:Hg19::chr14:61952109..61952155,+#_bd561f2bf9e80ab9125edb44eae7e4afp@chr14:61952109..61952155, +
7.05e-34FFCP PHASE1:Hg19::chr11:107729876..107729881,-#_bd561f2bf9e80ab9125edb44eae7e4afp10@SLC35F2
1.39e-33FFCP PHASE1:Hg19::chr5:153858071..153858085,+#_a0697d7738d2c91f1da616997615dd1a+, p@chr5:153858071..153858085
1.39e-33FFCP PHASE2:Hg19::chr5:153858071..153858085,+#_a0697d7738d2c91f1da616997615dd1ap@chr5:153858071..153858085, +
1.93e-33FFCP PHASE1:Hg19::chr13:114542805..114542816,-#_e42cb4fd49a99917d0e1fa5ea6e09c02p@chr13:114542805..114542816, -
1.93e-33FFCP PHASE2:Hg19::chr13:114542805..114542816,-#_e42cb4fd49a99917d0e1fa5ea6e09c02p@chr13:114542805..114542816, -