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CL:0002549

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Name:fibroblast of choroid plexus
Namespace:FANTOM
Definition:"A fibroblast that is part of the choroid plexus." [GOC:tfm]
Created by:tmeehan
Creation date:2011-02-28T05:01:39Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000057(fibroblast),CL:0002319(neural cell)
part_of:UBERON:0001886(choroid plexus)



Children


derives from:FF:0000060 (human fibroblast of choroid plexus sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002549 (fibroblast of choroid plexus), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
3.29e-195FFCP PHASE1:Hg19::chr1:201708474..201708479,+#_17efbaee1e6730ebd38f8e4074f71a0bp58@NAV1
3.29e-195FFCP PHASE1:Hg19::chr1:201708485..201708494,+#_17efbaee1e6730ebd38f8e4074f71a0bp55@NAV1
3.29e-195FFCP PHASE2:Hg19::chr1:201708474..201708479,+#_17efbaee1e6730ebd38f8e4074f71a0bp58@NAV1
3.29e-195FFCP PHASE2:Hg19::chr1:201708485..201708494,+#_17efbaee1e6730ebd38f8e4074f71a0bp55@NAV1
8.99e-131FFCP PHASE1:Hg19::chr8:24997361..24997368,-#_8eb2bba94b48a623360b0e3bc9b13c21p@chr8:24997361..24997368, -
8.99e-131FFCP PHASE2:Hg19::chr8:24997361..24997368,-#_8eb2bba94b48a623360b0e3bc9b13c21p@chr8:24997361..24997368, -
3.96e-66FFCP PHASE2:Hg19::chr17:75471711..75471726,+#_264969a3a95a35b9d937e93e50b2170bp73@SEPT9
3.96e-66FFCP PHASE1:Hg19::chr3:146517344..146517356,+#_264969a3a95a35b9d937e93e50b2170bp@chr3:146517344..146517356, +
3.96e-66FFCP PHASE2:Hg19::chr3:146517344..146517356,+#_264969a3a95a35b9d937e93e50b2170bp@chr3:146517344..146517356, +
3.96e-66FFCP PHASE1:Hg19::chr17:75471711..75471726,+#_264969a3a95a35b9d937e93e50b2170bp73@SEPT9
4.77e-57FFCP PHASE1:Hg19::chr12:15941738..15941768,+#_9b56d05c49a28cc5bd9e9ca39f366f32p@chr12:15941738..15941768, +
4.77e-57FFCP PHASE2:Hg19::chr12:15941738..15941768,+#_9b56d05c49a28cc5bd9e9ca39f366f32p@chr12:15941738..15941768, +
6.36e-57FFCP PHASE1:Hg19::chr5:149537789..149537803,-#_60504f26dd8f2144cbe8dadc5de5cfacp@chr5:149537789..149537803, -
6.36e-57FFCP PHASE2:Hg19::chr5:149537789..149537803,-#_60504f26dd8f2144cbe8dadc5de5cfacp@chr5:149537789..149537803, -
8.82e-51FFCP PHASE2:Hg19::chr14:76072096..76072107,+#_dfbbc4137800a9137038aa5a00a71381p7@FLVCR2
8.82e-51FFCP PHASE1:Hg19::chr14:76072096..76072107,+#_dfbbc4137800a9137038aa5a00a71381p7@FLVCR2
8.82e-51FFCP PHASE1:Hg19::chr10:105677427..105677438,-#_dfbbc4137800a9137038aa5a00a71381p7@OBFC1
8.82e-51FFCP PHASE2:Hg19::chr10:105677427..105677438,-#_dfbbc4137800a9137038aa5a00a71381p7@OBFC1
5.15e-50FFCP PHASE2:Hg19::chr16:65159735..65159744,-#_a96b58d1e255be6be53098a8de608bd3p@chr16:65159735..65159744, -
5.15e-50FFCP PHASE1:Hg19::chr16:65159735..65159744,-#_a96b58d1e255be6be53098a8de608bd3p@chr16:65159735..65159744, -
1.22e-44FFCP PHASE2:Hg19::chr5:158523468..158523481,-#_5f18db5ccdb18cdd0d16e4e3cc8b786dp20@EBF1
1.22e-44FFCP PHASE1:Hg19::chr5:158523468..158523481,-#_5f18db5ccdb18cdd0d16e4e3cc8b786dp20@EBF1
1.53e-44FFCP PHASE2:Hg19::chr11:60680190..60680212,+#_88964c7b4b7186242c7ca42b1e025511p@chr11:60680190..60680212, +
1.53e-44FFCP PHASE1:Hg19::chr11:60680190..60680212,+#_88964c7b4b7186242c7ca42b1e025511p@chr11:60680190..60680212, +
5.99e-41FFCP PHASE1:Hg19::chr9:132390755..132390781,+#_4f4c9f72aaeaa169bea392b9eb5f1e38p7@METTL11A
5.99e-41FFCP PHASE2:Hg19::chr9:132390755..132390781,+#_4f4c9f72aaeaa169bea392b9eb5f1e38p7@METTL11A
8.98e-41FFCP PHASE1:Hg19::chr1:19778678..19778689,-#_94a003d3cd30fd6674e7120be9851575p@chr1:19778678..19778689, -
8.98e-41FFCP PHASE2:Hg19::chr1:19778678..19778689,-#_94a003d3cd30fd6674e7120be9851575-, p@chr1:19778678..19778689
1.34e-40FFCP PHASE2:Hg19::chr4:111397216..111397250,+#_77bc6814b90ccc8e8dccd42b2ea386abp8@ENPEP
1.34e-40FFCP PHASE1:Hg19::chr4:111397216..111397250,+#_77bc6814b90ccc8e8dccd42b2ea386abp8@ENPEP
9.84e-37FFCP PHASE2:Hg19::chr11:44331735..44331747,-#_8c5e88632f61ac04407e86e3c6e3bab4p3@ALX4
9.84e-37FFCP PHASE1:Hg19::chr11:44331735..44331747,-#_8c5e88632f61ac04407e86e3c6e3bab4p3@ALX4
1.18e-36FFCP PHASE2:Hg19::chr1:236203048..236203055,-#_9ef24b682ff86d46de966f6fd9384645p@chr1:236203048..236203055, -
1.18e-36FFCP PHASE1:Hg19::chr1:236203048..236203055,-#_9ef24b682ff86d46de966f6fd9384645p@chr1:236203048..236203055, -
1.42e-36FFCP PHASE2:Hg19::chr6:72970377..72970387,+#_a4631b3d7a36849b87f2878e209a7f0cp20@RIMS1
1.42e-36FFCP PHASE1:Hg19::chr6:72970377..72970387,+#_a4631b3d7a36849b87f2878e209a7f0cp20@RIMS1
1.7e-36FFCP PHASE1:Hg19::chr14:87636652..87636657,-#_8a8323ce671094ec231db8d5787bf597p@chr14:87636652..87636657, -
1.7e-36FFCP PHASE2:Hg19::chr14:87636652..87636657,-#_8a8323ce671094ec231db8d5787bf597p@chr14:87636652..87636657, -
2.04e-36FFCP PHASE2:Hg19::chr14:61654271..61654282,+#_68cbc75eb7ba90f379cd25a1c9b8aa20p30@PRKCH
2.04e-36FFCP PHASE1:Hg19::chr14:61654271..61654282,+#_68cbc75eb7ba90f379cd25a1c9b8aa20p30@PRKCH
1.11e-34FFCP PHASE2:Hg19::chr12:108732917..108732935,-#_38926426e8184158f1a4fb5561a26fdbp5@CMKLR1
1.11e-34FFCP PHASE1:Hg19::chr12:108732917..108732935,-#_38926426e8184158f1a4fb5561a26fdbp5@CMKLR1
5.04e-34FFCP PHASE2:Hg19::chr9:130830760..130830783,+#_25427ab105d9a97203346ed7cea19682p11@SLC25A25
5.04e-34FFCP PHASE1:Hg19::chr9:130830760..130830783,+#_25427ab105d9a97203346ed7cea19682p11@SLC25A25
7.05e-34FFCP PHASE1:Hg19::chr6:36906253..36906260,-#_bb6cd3274cb81a5e8dbca8696852d815p@chr6:36906253..36906260, -
7.05e-34FFCP PHASE1:Hg19::chr2:231988425..231988433,-#_bb6cd3274cb81a5e8dbca8696852d815p11@HTR2B
7.05e-34FFCP PHASE1:Hg19::chr8:128902610..128902630,+#_bb6cd3274cb81a5e8dbca8696852d815p17@PVT1
7.05e-34FFCP PHASE2:Hg19::chr8:128902610..128902630,+#_bb6cd3274cb81a5e8dbca8696852d815p17@PVT1
7.05e-34FFCP PHASE2:Hg19::chr15:95869480..95869493,+#_bb6cd3274cb81a5e8dbca8696852d815p@chr15:95869480..95869493, +
7.05e-34FFCP PHASE2:Hg19::chr6:36906253..36906260,-#_bb6cd3274cb81a5e8dbca8696852d815p@chr6:36906253..36906260, -
7.05e-34FFCP PHASE1:Hg19::chr15:95869480..95869493,+#_bb6cd3274cb81a5e8dbca8696852d815p@chr15:95869480..95869493, +
7.05e-34FFCP PHASE2:Hg19::chr2:231988425..231988433,-#_bb6cd3274cb81a5e8dbca8696852d815p11@HTR2B
1.37e-31FFCP PHASE2:Hg19::chr2:223536233..223536234,+#_2eaa7cfc22cef8fb60a39a297218cfb8p3@MOGAT1
1.37e-31FFCP PHASE1:Hg19::chr2:223536233..223536234,+#_2eaa7cfc22cef8fb60a39a297218cfb8p3@MOGAT1
4.71e-31FFCP PHASE2:Hg19::chr5:134260455..134260471,-#_13dbed3a41fa5c07b2db8f8f2b264411-, p@chr5:134260455..134260471
4.71e-31FFCP PHASE2:Hg19::chr3:147127961..147127972,+#_13dbed3a41fa5c07b2db8f8f2b264411p3@AB464362
4.71e-31FFCP PHASE1:Hg19::chr5:134260455..134260471,-#_13dbed3a41fa5c07b2db8f8f2b264411p@chr5:134260455..134260471, -
4.71e-31FFCP PHASE1:Hg19::chr3:147127961..147127972,+#_13dbed3a41fa5c07b2db8f8f2b264411p3@AB464362
6.96e-30FFCP PHASE2:Hg19::chr16:65159902..65159909,-#_909fd6bcfcf6ac170e5474f274bfb30dp@chr16:65159902..65159909, -
6.96e-30FFCP PHASE1:Hg19::chr16:65159902..65159909,-#_909fd6bcfcf6ac170e5474f274bfb30dp@chr16:65159902..65159909, -
1.08e-29FFCP PHASE1:Hg19::chr5:149537807..149537827,-#_65b8f63959f0998309c709327ce6e18bp@chr5:149537807..149537827, -
1.08e-29FFCP PHASE2:Hg19::chr5:149537807..149537827,-#_65b8f63959f0998309c709327ce6e18bp@chr5:149537807..149537827, -
9.09e-27FFCP PHASE2:Hg19::chr3:147124547..147124563,-#_008607af4a8f211801d9f7a3579352a1p6@ZIC4
9.09e-27FFCP PHASE1:Hg19::chr3:147124547..147124563,-#_008607af4a8f211801d9f7a3579352a1p6@ZIC4
1.67e-26FFCP PHASE2:Hg19::chr2:238066183..238066194,-#_cfd74cef7dfcb9e986d3964086b32383p@chr2:238066183..238066194, -
1.67e-26FFCP PHASE1:Hg19::chr2:238066183..238066194,-#_cfd74cef7dfcb9e986d3964086b32383p@chr2:238066183..238066194, -
4.08e-26FFCP PHASE1:Hg19::chr5:40910094..40910097,+#_13995dbc570647ab53d266457c4540d0p@chr5:40910094..40910097, +
4.08e-26FFCP PHASE2:Hg19::chr5:40910094..40910097,+#_13995dbc570647ab53d266457c4540d0p@chr5:40910094..40910097, +
5.56e-26FFCP PHASE2:Hg19::chr11:61634768..61634777,+#_890b8e37ac5525d8706dd3108e489c36p@chr11:61634768..61634777, +
5.56e-26FFCP PHASE1:Hg19::chr11:61634768..61634777,+#_890b8e37ac5525d8706dd3108e489c36p@chr11:61634768..61634777, +
7.14e-26FFCP PHASE2:Hg19::chr8:58658778..58658788,+#_30b5345358b85ef14dd30f9e2b8c77ffp2@ENST00000518934, p2@uc003xti.1
7.14e-26FFCP PHASE1:Hg19::chr8:58658778..58658788,+#_30b5345358b85ef14dd30f9e2b8c77ffp2@ENST00000518934, p2@uc003xti.1
9.18e-26FFCP PHASE1:Hg19::chr6:129504885..129504896,-#_e52a57810cb08898e884071ebb898e31p@chr6:129504885..129504896, -
9.18e-26FFCP PHASE2:Hg19::chr6:129504885..129504896,-#_e52a57810cb08898e884071ebb898e31p@chr6:129504885..129504896, -
1.44e-25FFCP PHASE1:Hg19::chr3:147127358..147127369,+#_396cff8488ba43f04553127a0681c184p16@ZIC1
1.44e-25FFCP PHASE1:Hg19::chr12:279773..279812,+#_396cff8488ba43f04553127a0681c184+, p@chr12:279773..279812
1.44e-25FFCP PHASE2:Hg19::chr3:147127358..147127369,+#_396cff8488ba43f04553127a0681c184p16@ZIC1
1.44e-25FFCP PHASE2:Hg19::chr12:279773..279812,+#_396cff8488ba43f04553127a0681c184p@chr12:279773..279812, +
2.37e-25FFCP PHASE2:Hg19::chr3:147112699..147112713,-#_e9502dcef9587e3266c27ba9d5d38416p@chr3:147112699..147112713, -
2.37e-25FFCP PHASE1:Hg19::chr3:147112699..147112713,-#_e9502dcef9587e3266c27ba9d5d38416p@chr3:147112699..147112713, -
1.15e-24FFCP PHASE1:Hg19::chr1:47903765..47903783,+#_d2a4012b276ed7d5378059ff230105f8p5@FOXD2
1.15e-24FFCP PHASE2:Hg19::chr1:47903765..47903783,+#_d2a4012b276ed7d5378059ff230105f8p5@FOXD2
1.45e-24FFCP PHASE1:Hg19::chr9:16138889..16138902,-#_ac5d9f76a843e04f70822420aafbca98p@chr9:16138889..16138902, -
1.45e-24FFCP PHASE2:Hg19::chr9:16138889..16138902,-#_ac5d9f76a843e04f70822420aafbca98p@chr9:16138889..16138902, -
2.97e-24FFCP PHASE1:Hg19::chr2:192128035..192128057,+#_60aa778a5e66ee0c420b6448b3be8a7ep6@MYO1B
2.97e-24FFCP PHASE2:Hg19::chr2:192128035..192128057,+#_60aa778a5e66ee0c420b6448b3be8a7ep6@MYO1B
3.34e-24FFCP PHASE1:Hg19::chr3:147088197..147088208,-#_3a89c0085ab6814a7b6effed69729b10p@chr3:147088197..147088208, -
3.34e-24FFCP PHASE2:Hg19::chr3:147088197..147088208,-#_3a89c0085ab6814a7b6effed69729b10p@chr3:147088197..147088208, -
5.35e-24FFCP PHASE1:Hg19::chr17:1013251..1013277,-#_54981a26d06eb00da9e962421897f5aep@chr17:1013251..1013277, -
5.35e-24FFCP PHASE2:Hg19::chr17:1013251..1013277,-#_54981a26d06eb00da9e962421897f5aep@chr17:1013251..1013277, -
1.01e-23FFCP PHASE2:Hg19::chr11:60640905..60640919,+#_9f087921ce93e22b24a424ef1a5e6243p@chr11:60640905..60640919, +
1.01e-23FFCP PHASE1:Hg19::chr11:60640905..60640919,+#_9f087921ce93e22b24a424ef1a5e6243p@chr11:60640905..60640919, +
1.42e-23FFCP PHASE1:Hg19::chr17:75446774..75446783,+#_248e55bbcdb9e1f9c3c7e05d075eda31p49@SEPT9
1.42e-23FFCP PHASE2:Hg19::chr17:75446774..75446783,+#_248e55bbcdb9e1f9c3c7e05d075eda31p49@SEPT9
3.49e-23FFCP PHASE2:Hg19::chr11:8832119..8832124,-#_facd3a9bb733486247f1a35c9dd58198p30@ST5
3.49e-23FFCP PHASE1:Hg19::chr11:8832119..8832124,-#_facd3a9bb733486247f1a35c9dd58198p30@ST5
6.84e-23FFCP PHASE2:Hg19::chr6:55739244..55739256,-#_74cdc73adb9fe6503409526a6150cbacp2@AB527577, p2@CU693346
6.84e-23FFCP PHASE1:Hg19::chr6:55739244..55739256,-#_74cdc73adb9fe6503409526a6150cbacp2@AB527577, p2@CU693346
2.06e-22FFCP PHASE2:Hg19::chr11:60610073..60610090,+#_a01dfa4400a636188737e6482f4d2245p6@CCDC86
2.06e-22FFCP PHASE1:Hg19::chr11:60610073..60610090,+#_a01dfa4400a636188737e6482f4d2245p6@CCDC86