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CL:0002553

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Name:lung fibroblast
Namespace:FANTOM
Definition:"A fibroblast that is part of lung." [GOC:tfm]
Xrefs:
links:
BTO:0000764
Created by:tmeehan
Creation date:2011-02-28T05:11:03Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000057(fibroblast),CL_0000057()
part_of:UBERON:0002048(lung)



Children


is a:FF:10730-110B1 (non-small cell lung cancer cell line:NCI-H1385)
derives from:FF:0000064 (human fibroblast of lung sample),FF:0100161 (lung fibroblast cell line sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002553 (lung fibroblast), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr4:93512357..93512364,+#_1f6119cd07eee58613b0c3b98b0b66f9p@chr4:93512357..93512364, +
5.42e-195FFCP PHASE1:Hg19::chr8:13988549..13988555,+#_1f6119cd07eee58613b0c3b98b0b66f9p@chr8:13988549..13988555, +
5.42e-195FFCP PHASE1:Hg19::chr18:63412128..63412151,+#_1f6119cd07eee58613b0c3b98b0b66f9p@chr18:63412128..63412151, +
5.42e-195FFCP PHASE2:Hg19::chr18:63412128..63412151,+#_1f6119cd07eee58613b0c3b98b0b66f9p@chr18:63412128..63412151, +
5.42e-195FFCP PHASE1:Hg19::chr18:63412228..63412270,+#_1f6119cd07eee58613b0c3b98b0b66f9p@chr18:63412228..63412270, +
5.42e-195FFCP PHASE1:Hg19::chr4:93512357..93512364,+#_1f6119cd07eee58613b0c3b98b0b66f9p@chr4:93512357..93512364, +
5.42e-195FFCP PHASE2:Hg19::chr18:63412228..63412270,+#_1f6119cd07eee58613b0c3b98b0b66f9p@chr18:63412228..63412270, +
5.42e-195FFCP PHASE2:Hg19::chr8:13988549..13988555,+#_1f6119cd07eee58613b0c3b98b0b66f9p@chr8:13988549..13988555, +
9.37e-99FFCP PHASE2:Hg19::chr6:28479346..28479352,+#_f1d55c7b75671969cd2bcbf3f2aa4fabp@chr6:28479346..28479352, +
9.37e-99FFCP PHASE2:Hg19::chr2:115918789..115918795,-#_f1d55c7b75671969cd2bcbf3f2aa4fabp3@ENST00000448663
9.37e-99FFCP PHASE2:Hg19::chr4:116434644..116434654,+#_f1d55c7b75671969cd2bcbf3f2aa4fabp@chr4:116434644..116434654, +
9.37e-99FFCP PHASE1:Hg19::chr4:116434644..116434654,+#_f1d55c7b75671969cd2bcbf3f2aa4fabp@chr4:116434644..116434654, +
9.37e-99FFCP PHASE2:Hg19::chr8:114449612..114449615,-#_f1d55c7b75671969cd2bcbf3f2aa4fabp10@CSMD3
9.37e-99FFCP PHASE1:Hg19::chr11:13809056..13809057,+#_f1d55c7b75671969cd2bcbf3f2aa4fabp@chr11:13809056..13809057, +
9.37e-99FFCP PHASE1:Hg19::chr6:28479346..28479352,+#_f1d55c7b75671969cd2bcbf3f2aa4fabp@chr6:28479346..28479352, +
9.37e-99FFCP PHASE1:Hg19::chr8:114449612..114449615,-#_f1d55c7b75671969cd2bcbf3f2aa4fabp10@CSMD3
9.37e-99FFCP PHASE1:Hg19::chr1:246382944..246382951,-#_f1d55c7b75671969cd2bcbf3f2aa4fabp@chr1:246382944..246382951, -
9.37e-99FFCP PHASE2:Hg19::chr11:13809056..13809057,+#_f1d55c7b75671969cd2bcbf3f2aa4fabp@chr11:13809056..13809057, +
9.37e-99FFCP PHASE2:Hg19::chr1:246382944..246382951,-#_f1d55c7b75671969cd2bcbf3f2aa4fabp@chr1:246382944..246382951, -
9.37e-99FFCP PHASE1:Hg19::chr2:115918789..115918795,-#_f1d55c7b75671969cd2bcbf3f2aa4fabp3@ENST00000448663
2.55e-98FFCP PHASE1:Hg19::chr8:114449616..114449629,-#_d6ea3cce7706220617c0ae8f951cc8c4p3@CSMD3
2.55e-98FFCP PHASE2:Hg19::chr6:18208412..18208420,+#_d6ea3cce7706220617c0ae8f951cc8c4p@chr6:18208412..18208420, +
2.55e-98FFCP PHASE1:Hg19::chr13:110782380..110782393,-#_d6ea3cce7706220617c0ae8f951cc8c4p@chr13:110782380..110782393, -
2.55e-98FFCP PHASE1:Hg19::chrX:118161803..118161808,-#_d6ea3cce7706220617c0ae8f951cc8c4p@chrX:118161803..118161808, -
2.55e-98FFCP PHASE1:Hg19::chr10:22657489..22657502,+#_d6ea3cce7706220617c0ae8f951cc8c4p@chr10:22657489..22657502, +
2.55e-98FFCP PHASE2:Hg19::chr13:110782380..110782393,-#_d6ea3cce7706220617c0ae8f951cc8c4p@chr13:110782380..110782393, -
2.55e-98FFCP PHASE1:Hg19::chr6:18208412..18208420,+#_d6ea3cce7706220617c0ae8f951cc8c4p@chr6:18208412..18208420, +
2.55e-98FFCP PHASE1:Hg19::chr7:157944243..157944249,-#_d6ea3cce7706220617c0ae8f951cc8c4p@chr7:157944243..157944249, -
2.55e-98FFCP PHASE1:Hg19::chr7:25354153..25354185,+#_d6ea3cce7706220617c0ae8f951cc8c4p@chr7:25354153..25354185, +
2.55e-98FFCP PHASE1:Hg19::chr10:22657523..22657534,+#_d6ea3cce7706220617c0ae8f951cc8c4p@chr10:22657523..22657534, +
2.55e-98FFCP PHASE2:Hg19::chr10:22657489..22657502,+#_d6ea3cce7706220617c0ae8f951cc8c4p@chr10:22657489..22657502, +
2.55e-98FFCP PHASE2:Hg19::chrX:118161803..118161808,-#_d6ea3cce7706220617c0ae8f951cc8c4p@chrX:118161803..118161808, -
2.55e-98FFCP PHASE2:Hg19::chr8:114449616..114449629,-#_d6ea3cce7706220617c0ae8f951cc8c4p3@CSMD3
2.55e-98FFCP PHASE2:Hg19::chr10:22657523..22657534,+#_d6ea3cce7706220617c0ae8f951cc8c4p@chr10:22657523..22657534, +
2.55e-98FFCP PHASE2:Hg19::chr7:157944243..157944249,-#_d6ea3cce7706220617c0ae8f951cc8c4p@chr7:157944243..157944249, -
2.55e-98FFCP PHASE2:Hg19::chr7:25354153..25354185,+#_d6ea3cce7706220617c0ae8f951cc8c4p@chr7:25354153..25354185, +
1.23e-66FFCP PHASE2:Hg19::chr11:69518108..69518118,-#_4859e9cc68bb844d16be3516852e2527p@chr11:69518108..69518118, -
1.23e-66FFCP PHASE2:Hg19::chr5:77683792..77683799,+#_4859e9cc68bb844d16be3516852e2527p@chr5:77683792..77683799, +
1.23e-66FFCP PHASE2:Hg19::chr7:1968190..1968198,-#_4859e9cc68bb844d16be3516852e2527-, p@chr7:1968190..1968198
1.23e-66FFCP PHASE1:Hg19::chr11:69518332..69518343,-#_4859e9cc68bb844d16be3516852e2527p@chr11:69518332..69518343, -
1.23e-66FFCP PHASE2:Hg19::chr1:239571457..239571466,+#_4859e9cc68bb844d16be3516852e2527p18@CHRM3
1.23e-66FFCP PHASE2:Hg19::chr11:69518332..69518343,-#_4859e9cc68bb844d16be3516852e2527p@chr11:69518332..69518343, -
1.23e-66FFCP PHASE2:Hg19::chr12:57638896..57638928,-#_4859e9cc68bb844d16be3516852e2527p@chr12:57638896..57638928, -
1.23e-66FFCP PHASE1:Hg19::chr12:57638896..57638928,-#_4859e9cc68bb844d16be3516852e2527p@chr12:57638896..57638928, -
1.23e-66FFCP PHASE1:Hg19::chr1:168356398..168356401,+#_4859e9cc68bb844d16be3516852e2527p@chr1:168356398..168356401, +
1.23e-66FFCP PHASE1:Hg19::chr7:1968190..1968198,-#_4859e9cc68bb844d16be3516852e2527-, p@chr7:1968190..1968198
1.23e-66FFCP PHASE2:Hg19::chr17:26715557..26715559,+#_4859e9cc68bb844d16be3516852e2527p@chr17:26715557..26715559, +
1.23e-66FFCP PHASE1:Hg19::chr17:26715557..26715559,+#_4859e9cc68bb844d16be3516852e2527p@chr17:26715557..26715559, +
1.23e-66FFCP PHASE1:Hg19::chr5:77683792..77683799,+#_4859e9cc68bb844d16be3516852e2527p@chr5:77683792..77683799, +
1.23e-66FFCP PHASE2:Hg19::chr1:168356398..168356401,+#_4859e9cc68bb844d16be3516852e2527p@chr1:168356398..168356401, +
1.23e-66FFCP PHASE2:Hg19::chr10:5407085..5407093,+#_4859e9cc68bb844d16be3516852e2527p5@UCN3
1.23e-66FFCP PHASE1:Hg19::chr1:239571457..239571466,+#_4859e9cc68bb844d16be3516852e2527p18@CHRM3
1.23e-66FFCP PHASE2:Hg19::chr19:51412411..51412426,-#_4859e9cc68bb844d16be3516852e2527p4@KLK4
1.23e-66FFCP PHASE1:Hg19::chr19:51412411..51412426,-#_4859e9cc68bb844d16be3516852e2527p4@KLK4
1.23e-66FFCP PHASE1:Hg19::chr18:63418785..63418796,+#_4859e9cc68bb844d16be3516852e2527p@chr18:63418785..63418796, +
1.23e-66FFCP PHASE1:Hg19::chr11:69518108..69518118,-#_4859e9cc68bb844d16be3516852e2527p@chr11:69518108..69518118, -
1.23e-66FFCP PHASE2:Hg19::chr18:63418785..63418796,+#_4859e9cc68bb844d16be3516852e2527p@chr18:63418785..63418796, +
1.23e-66FFCP PHASE1:Hg19::chr10:5407085..5407093,+#_4859e9cc68bb844d16be3516852e2527p5@UCN3
2.39e-66FFCP PHASE2:Hg19::chr18:71843159..71843180,+#_2f490eb73e496dcd6493351a092292b4p@chr18:71843159..71843180, +
2.39e-66FFCP PHASE1:Hg19::chr10:5060201..5060211,-#_2f490eb73e496dcd6493351a092292b4p5@AKR1C2
2.39e-66FFCP PHASE2:Hg19::chr7:15071427..15071430,-#_2f490eb73e496dcd6493351a092292b4-, p@chr7:15071427..15071430
2.39e-66FFCP PHASE1:Hg19::chr12:127385138..127385144,-#_2f490eb73e496dcd6493351a092292b4p@chr12:127385138..127385144, -
2.39e-66FFCP PHASE2:Hg19::chr7:1968200..1968208,-#_2f490eb73e496dcd6493351a092292b4p@chr7:1968200..1968208, -
2.39e-66FFCP PHASE2:Hg19::chr18:72611750..72611755,+#_2f490eb73e496dcd6493351a092292b4p@chr18:72611750..72611755, +
2.39e-66FFCP PHASE2:Hg19::chr4:116209677..116209718,+#_2f490eb73e496dcd6493351a092292b4p@chr4:116209677..116209718, +
2.39e-66FFCP PHASE1:Hg19::chr4:116209677..116209718,+#_2f490eb73e496dcd6493351a092292b4p@chr4:116209677..116209718, +
2.39e-66FFCP PHASE2:Hg19::chr6:18208425..18208436,+#_2f490eb73e496dcd6493351a092292b4p@chr6:18208425..18208436, +
2.39e-66FFCP PHASE2:Hg19::chr7:100810466..100810470,+#_2f490eb73e496dcd6493351a092292b4p@chr7:100810466..100810470, +
2.39e-66FFCP PHASE2:Hg19::chr22:49769903..49769910,+#_2f490eb73e496dcd6493351a092292b4p@chr22:49769903..49769910, +
2.39e-66FFCP PHASE1:Hg19::chr7:100810466..100810470,+#_2f490eb73e496dcd6493351a092292b4p@chr7:100810466..100810470, +
2.39e-66FFCP PHASE2:Hg19::chr4:3344434..3344441,+#_2f490eb73e496dcd6493351a092292b4p@chr4:3344434..3344441, +
2.39e-66FFCP PHASE1:Hg19::chr18:71843121..71843138,+#_2f490eb73e496dcd6493351a092292b4p@chr18:71843121..71843138, +
2.39e-66FFCP PHASE2:Hg19::chr12:127385138..127385144,-#_2f490eb73e496dcd6493351a092292b4p@chr12:127385138..127385144, -
2.39e-66FFCP PHASE1:Hg19::chr7:1968200..1968208,-#_2f490eb73e496dcd6493351a092292b4p@chr7:1968200..1968208, -
2.39e-66FFCP PHASE2:Hg19::chr1:223895346..223895353,-#_2f490eb73e496dcd6493351a092292b4p@chr1:223895346..223895353, -
2.39e-66FFCP PHASE1:Hg19::chr6:18208425..18208436,+#_2f490eb73e496dcd6493351a092292b4p@chr6:18208425..18208436, +
2.39e-66FFCP PHASE1:Hg19::chr4:3344434..3344441,+#_2f490eb73e496dcd6493351a092292b4p@chr4:3344434..3344441, +
2.39e-66FFCP PHASE2:Hg19::chr10:5060201..5060211,-#_2f490eb73e496dcd6493351a092292b4p5@AKR1C2
2.39e-66FFCP PHASE1:Hg19::chr18:71843159..71843180,+#_2f490eb73e496dcd6493351a092292b4p@chr18:71843159..71843180, +
2.39e-66FFCP PHASE1:Hg19::chr22:49769903..49769910,+#_2f490eb73e496dcd6493351a092292b4p@chr22:49769903..49769910, +
2.39e-66FFCP PHASE1:Hg19::chr1:223895346..223895353,-#_2f490eb73e496dcd6493351a092292b4p@chr1:223895346..223895353, -
2.39e-66FFCP PHASE2:Hg19::chr18:71843121..71843138,+#_2f490eb73e496dcd6493351a092292b4p@chr18:71843121..71843138, +
2.39e-66FFCP PHASE1:Hg19::chr18:72611750..72611755,+#_2f490eb73e496dcd6493351a092292b4p@chr18:72611750..72611755, +
2.39e-66FFCP PHASE1:Hg19::chr7:15071427..15071430,-#_2f490eb73e496dcd6493351a092292b4p@chr7:15071427..15071430, -
4.66e-66FFCP PHASE1:Hg19::chr4:3310694..3310716,-#_b103f3e8ef1301664003b9bcf82b06f8p@chr4:3310694..3310716, -
4.66e-66FFCP PHASE1:Hg19::chr2:108602414..108602423,+#_b103f3e8ef1301664003b9bcf82b06f8p@chr2:108602414..108602423, +
4.66e-66FFCP PHASE1:Hg19::chr2:108746272..108746286,+#_b103f3e8ef1301664003b9bcf82b06f8p@chr2:108746272..108746286, +
4.66e-66FFCP PHASE1:Hg19::chrX:118621021..118621027,-#_b103f3e8ef1301664003b9bcf82b06f8p@chrX:118621021..118621027, -
4.66e-66FFCP PHASE1:Hg19::chr22:49819110..49819121,-#_b103f3e8ef1301664003b9bcf82b06f8p5@C22orf34
4.66e-66FFCP PHASE2:Hg19::chr2:108602414..108602423,+#_b103f3e8ef1301664003b9bcf82b06f8p@chr2:108602414..108602423, +
4.66e-66FFCP PHASE2:Hg19::chr2:108746272..108746286,+#_b103f3e8ef1301664003b9bcf82b06f8p@chr2:108746272..108746286, +
4.66e-66FFCP PHASE1:Hg19::chr7:44574294..44574303,-#_b103f3e8ef1301664003b9bcf82b06f8p@chr7:44574294..44574303, -
4.66e-66FFCP PHASE2:Hg19::chr9:33719660..33719671,-#_b103f3e8ef1301664003b9bcf82b06f8p@chr9:33719660..33719671, -
4.66e-66FFCP PHASE2:Hg19::chr12:53686428..53686432,+#_b103f3e8ef1301664003b9bcf82b06f8p@chr12:53686428..53686432, +
4.66e-66FFCP PHASE1:Hg19::chr12:53686428..53686432,+#_b103f3e8ef1301664003b9bcf82b06f8p@chr12:53686428..53686432, +
4.66e-66FFCP PHASE2:Hg19::chr7:44574294..44574303,-#_b103f3e8ef1301664003b9bcf82b06f8p@chr7:44574294..44574303, -
4.66e-66FFCP PHASE2:Hg19::chr13:79169067..79169071,-#_b103f3e8ef1301664003b9bcf82b06f8p@chr13:79169067..79169071, -
4.66e-66FFCP PHASE2:Hg19::chr22:49819110..49819121,-#_b103f3e8ef1301664003b9bcf82b06f8p5@C22orf34
4.66e-66FFCP PHASE2:Hg19::chrX:118621021..118621027,-#_b103f3e8ef1301664003b9bcf82b06f8p@chrX:118621021..118621027, -
4.66e-66FFCP PHASE1:Hg19::chr9:33719660..33719671,-#_b103f3e8ef1301664003b9bcf82b06f8p@chr9:33719660..33719671, -