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CL:0002595

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Name:smooth muscle cell of the subclavian artery
Namespace:FANTOM
Definition:"A smooth muscle cell of the subclavian artery." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-06T05:01:52Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000359(vascular associated smooth muscle cell)
part_of:UBERON:0001533(subclavian artery)



Children


is a:CL:0002593 (smooth muscle cell of the internal thoracic artery)
derives from:FF:0000175 (human smooth muscle cell of subclavian artery sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
  • 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
  • 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
  • 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
  • 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
  • 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)

Mouse (Mus musculus)

  • 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
  • 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
  • 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
  • 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
  • 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
  • 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002595 (smooth muscle cell of the subclavian artery), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.65e-59FFCP PHASE1:Hg19::chr19:18319115..18319122,+#_9750e2c3f2ff6c42150680876e8e32cep@chr19:18319115..18319122, +
1.65e-59FFCP PHASE2:Hg19::chr19:18319115..18319122,+#_9750e2c3f2ff6c42150680876e8e32cep@chr19:18319115..18319122, +
3.22e-57FFCP PHASE1:Hg19::chr9:3898831..3898843,-#_f62e85c2a7b91ed5e15e1598c0415e32p@chr9:3898831..3898843, -
3.22e-57FFCP PHASE2:Hg19::chr9:3898831..3898843,-#_f62e85c2a7b91ed5e15e1598c0415e32p@chr9:3898831..3898843, -
1.94e-51FFCP PHASE1:Hg19::chr13:67922393..67922399,-#_295efaa1b7d2308843b76267a06c4213p@chr13:67922393..67922399, -
1.94e-51FFCP PHASE2:Hg19::chr13:67922393..67922399,-#_295efaa1b7d2308843b76267a06c4213p@chr13:67922393..67922399, -
2.3e-51FFCP PHASE1:Hg19::chr8:4812273..4812274,-#_4c8efb0d58953af208ce0173f1968ad5p@chr8:4812273..4812274, -
2.3e-51FFCP PHASE2:Hg19::chr8:4812273..4812274,-#_4c8efb0d58953af208ce0173f1968ad5p@chr8:4812273..4812274, -
1.42e-40FFCP PHASE1:Hg19::chr11:102668160..102668174,+#_a1b66a70f8c814a5882964ede05f077dp@chr11:102668160..102668174, +
1.42e-40FFCP PHASE2:Hg19::chr11:102668160..102668174,+#_a1b66a70f8c814a5882964ede05f077dp@chr11:102668160..102668174, +
1.48e-40FFCP PHASE1:Hg19::chr21:29911657..29911665,+#_d3691e0068f6c38975e2711bdd8dff83p2@LINC00161
1.48e-40FFCP PHASE2:Hg19::chr21:29911657..29911665,+#_d3691e0068f6c38975e2711bdd8dff83p2@LINC00161
3.31e-40FFCP PHASE2:Hg19::chr6:50692227..50692236,+#_af04ac070d32747e3a52dd2fbc7ea984+, p@chr6:50692227..50692236
3.31e-40FFCP PHASE1:Hg19::chr9:3899086..3899097,-#_af04ac070d32747e3a52dd2fbc7ea984p@chr9:3899086..3899097, -
3.31e-40FFCP PHASE2:Hg19::chr9:3899086..3899097,-#_af04ac070d32747e3a52dd2fbc7ea984p@chr9:3899086..3899097, -
3.31e-40FFCP PHASE1:Hg19::chr6:50692227..50692236,+#_af04ac070d32747e3a52dd2fbc7ea984p@chr6:50692227..50692236, +
4.35e-40FFCP PHASE1:Hg19::chrY:16915943..16915949,-#_bf7c191c9fd899655b04c9c556c8b86ap1@NLGN4Y-AS1
4.35e-40FFCP PHASE2:Hg19::chrY:16915943..16915949,-#_bf7c191c9fd899655b04c9c556c8b86ap1@NLGN4Y-AS1
2.29e-38FFCP PHASE2:Hg19::chr7:93516564..93516575,+#_e57e8bfd5a27ffe582d928c684b502f7p@chr7:93516564..93516575, +
2.29e-38FFCP PHASE1:Hg19::chr7:93516564..93516575,+#_e57e8bfd5a27ffe582d928c684b502f7p@chr7:93516564..93516575, +
2.0e-36FFCP PHASE2:Hg19::chr19:55877364..55877367,-#_a034f8dd14f3273239abaa7afcbae834p@chr19:55877364..55877367, -
2.0e-36FFCP PHASE1:Hg19::chr19:55877364..55877367,-#_a034f8dd14f3273239abaa7afcbae834p@chr19:55877364..55877367, -
2.07e-36FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_28d1461f269629fe2b1bd3488317db76+, p@chr6:53359400..53359406
2.07e-36FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_28d1461f269629fe2b1bd3488317db76p@chr6:53359400..53359406, +
2.55e-36FFCP PHASE2:Hg19::chr7:93519591..93519595,-#_5e660e0f90e996ede1c6d609bfa9fe5dp9@TFPI2
2.55e-36FFCP PHASE1:Hg19::chr7:93519591..93519595,-#_5e660e0f90e996ede1c6d609bfa9fe5dp9@TFPI2
7.75e-34FFCP PHASE1:Hg19::chr21:30000326..30000330,+#_351130c55d7b9c86eeccc20735662f26p@chr21:30000326..30000330, +
7.75e-34FFCP PHASE2:Hg19::chr21:30000326..30000330,+#_351130c55d7b9c86eeccc20735662f26p@chr21:30000326..30000330, +
6.67e-33FFCP PHASE2:Hg19::chr9:3898804..3898817,-#_f63597f0626490d18a0598f805a0716ep@chr9:3898804..3898817, -
6.67e-33FFCP PHASE1:Hg19::chr9:3898804..3898817,-#_f63597f0626490d18a0598f805a0716ep@chr9:3898804..3898817, -
9.62e-32FFCP PHASE2:Hg19::chr4:74702707..74702718,+#_eabd76d094a9802898cd37ce111975adp7@CXCL6
9.62e-32FFCP PHASE1:Hg19::chr4:74702707..74702718,+#_eabd76d094a9802898cd37ce111975adp7@CXCL6
2.86e-30FFCP PHASE2:Hg19::chr11:27723059..27723067,-#_6740f341cfc448753c51cdd8de690b63p11@BDNF
2.86e-30FFCP PHASE1:Hg19::chr11:27723059..27723067,-#_6740f341cfc448753c51cdd8de690b63p11@BDNF
6.35e-30FFCP PHASE1:Hg19::chr12:63025600..63025629,+#_9a12846e3ab8e2be9d48c8748de2d57ep@chr12:63025600..63025629, +
6.35e-30FFCP PHASE2:Hg19::chr12:63025600..63025629,+#_9a12846e3ab8e2be9d48c8748de2d57ep@chr12:63025600..63025629, +
1.14e-29FFCP PHASE1:Hg19::chr7:93515914..93515935,-#_0bd172573f2d45e4a1e66bf1fb8feb15p@chr7:93515914..93515935, -
1.14e-29FFCP PHASE2:Hg19::chr7:93515914..93515935,-#_0bd172573f2d45e4a1e66bf1fb8feb15p@chr7:93515914..93515935, -
3.44e-29FFCP PHASE1:Hg19::chr10:35930025..35930031,-#_e3b44668a6323aeaf7ad26c75eaa41b9p1@FZD8
3.44e-29FFCP PHASE2:Hg19::chr10:35930025..35930031,-#_e3b44668a6323aeaf7ad26c75eaa41b9p1@FZD8
5.33e-29FFCP PHASE1:Hg19::chrX:142113711..142113717,+#_dfaf394a6da737f8fba3b877a23a7dc4p1@SPANXN4
5.33e-29FFCP PHASE2:Hg19::chrX:142113711..142113717,+#_dfaf394a6da737f8fba3b877a23a7dc4p1@SPANXN4
1.16e-28FFCP PHASE2:Hg19::chr11:102662218..102662229,-#_22415daef6ca25fc5a564f6d44355f9ep@chr11:102662218..102662229, -
1.16e-28FFCP PHASE1:Hg19::chr11:102662218..102662229,-#_22415daef6ca25fc5a564f6d44355f9ep@chr11:102662218..102662229, -
2.11e-28FFCP PHASE1:Hg19::chr4:54931877..54931892,-#_66de3796f4d60f25d4067f878969a78fp@chr4:54931877..54931892, -
2.11e-28FFCP PHASE2:Hg19::chr4:54931877..54931892,-#_66de3796f4d60f25d4067f878969a78fp@chr4:54931877..54931892, -
4.13e-28FFCP PHASE1:Hg19::chr9:33797932..33797960,-#_05ecb8d5af8ba581a00976e79c72caecp@chr9:33797932..33797960, -
4.13e-28FFCP PHASE2:Hg19::chr9:33797932..33797960,-#_05ecb8d5af8ba581a00976e79c72caecp@chr9:33797932..33797960, -
5.46e-28FFCP PHASE2:Hg19::chr19:52076425..52076440,+#_a30e47d1088d0e2fd1634469080bd83ep2@ZNF175
5.46e-28FFCP PHASE1:Hg19::chr19:52076425..52076440,+#_a30e47d1088d0e2fd1634469080bd83ep2@ZNF175
5.51e-28FFCP PHASE2:Hg19::chr17:32583293..32583323,-#_f324cef18d77da6e5fba21309f642a2fp@chr17:32583293..32583323, -
5.51e-28FFCP PHASE1:Hg19::chr17:32583293..32583323,-#_f324cef18d77da6e5fba21309f642a2fp@chr17:32583293..32583323, -
8.03e-28FFCP PHASE1:Hg19::chr5:150157860..150157883,+#_6e23273ac0817b8d8fe92f504c77ad1bp4@C5orf62
8.03e-28FFCP PHASE2:Hg19::chr5:150157860..150157883,+#_6e23273ac0817b8d8fe92f504c77ad1bp4@C5orf62
1.46e-27FFCP PHASE1:Hg19::chr3:172351514..172351536,-#_59283fbcac21bba53895d1bd44543ceep@chr3:172351514..172351536, -
1.46e-27FFCP PHASE2:Hg19::chr3:172351514..172351536,-#_59283fbcac21bba53895d1bd44543ceep@chr3:172351514..172351536, -
1.66e-27FFCP PHASE1:Hg19::chr2:113587914..113587925,+#_31b9471d58e0167ffc78360453368a9fp@chr2:113587914..113587925, +
1.66e-27FFCP PHASE2:Hg19::chr2:113587914..113587925,+#_31b9471d58e0167ffc78360453368a9fp@chr2:113587914..113587925, +
2.38e-27FFCP PHASE1:Hg19::chr4:169022528..169022531,+#_abfa887e2cbeacf0a4ff418071b77d43p@chr4:169022528..169022531, +
2.38e-27FFCP PHASE2:Hg19::chr4:169022528..169022531,+#_abfa887e2cbeacf0a4ff418071b77d43p@chr4:169022528..169022531, +
2.72e-27FFCP PHASE1:Hg19::chr18:68919827..68919832,+#_3322f46e3cc3efd312b99f020a36fc2d+, p@chr18:68919827..68919832
2.72e-27FFCP PHASE2:Hg19::chr18:68919827..68919832,+#_3322f46e3cc3efd312b99f020a36fc2dp@chr18:68919827..68919832, +
2.72e-27FFCP PHASE1:Hg19::chr10:77056181..77056190,+#_3322f46e3cc3efd312b99f020a36fc2dp2@ZNF503-AS1
2.72e-27FFCP PHASE2:Hg19::chr10:77056181..77056190,+#_3322f46e3cc3efd312b99f020a36fc2dp2@ZNF503-AS1
4.63e-27FFCP PHASE2:Hg19::chr3:157206111..157206139,-#_6f67c520710579df9c0b0de270a43925p@chr3:157206111..157206139, -
4.63e-27FFCP PHASE1:Hg19::chr3:157206111..157206139,-#_6f67c520710579df9c0b0de270a43925p@chr3:157206111..157206139, -
4.63e-27FFCP PHASE2:Hg19::chr3:151514337..151514348,+#_6f67c520710579df9c0b0de270a43925p@chr3:151514337..151514348, +
4.63e-27FFCP PHASE1:Hg19::chr3:151514337..151514348,+#_6f67c520710579df9c0b0de270a43925p@chr3:151514337..151514348, +
6.82e-27FFCP PHASE1:Hg19::chr5:54281153..54281165,-#_85b05c16e5939683de9d1bb2cfa6d43ap1@AB590689
6.82e-27FFCP PHASE2:Hg19::chr5:54281153..54281165,-#_85b05c16e5939683de9d1bb2cfa6d43ap1@AB590689
7.86e-27FFCP PHASE2:Hg19::chr4:74902919..74902931,-#_f71d19a2418624eb80947a0f58ca3b5ap@chr4:74902919..74902931, -
7.86e-27FFCP PHASE1:Hg19::chr4:74902919..74902931,-#_f71d19a2418624eb80947a0f58ca3b5ap@chr4:74902919..74902931, -
9.32e-27FFCP PHASE2:Hg19::chr7:93519528..93519538,-#_fce4153389c2a4d01183a0ffbc0d5b53p7@TFPI2
9.32e-27FFCP PHASE1:Hg19::chr7:93519528..93519538,-#_fce4153389c2a4d01183a0ffbc0d5b53p7@TFPI2
1.7e-26FFCP PHASE1:Hg19::chr11:102668185..102668198,-#_c98ec5a7b5e61f0558f75c38161de903p12@MMP1
1.7e-26FFCP PHASE2:Hg19::chr11:102668185..102668198,-#_c98ec5a7b5e61f0558f75c38161de903p12@MMP1
3.65e-26FFCP PHASE1:Hg19::chr7:93519576..93519598,+#_5ec89969c55add601c9139cefcdeabe4p@chr7:93519576..93519598, +
3.65e-26FFCP PHASE2:Hg19::chr7:93519576..93519598,+#_5ec89969c55add601c9139cefcdeabe4p@chr7:93519576..93519598, +
4.43e-26FFCP PHASE2:Hg19::chr1:12010434..12010450,+#_66b4086cadc5adac01e3becd86a0caf1p@chr1:12010434..12010450, +
4.43e-26FFCP PHASE1:Hg19::chr1:12010434..12010450,+#_66b4086cadc5adac01e3becd86a0caf1p@chr1:12010434..12010450, +
4.97e-26FFCP PHASE1:Hg19::chr8:42042635..42042650,-#_84a706138b589bbed5635cba5d6f2660p4@PLAT
4.97e-26FFCP PHASE2:Hg19::chr8:42042635..42042650,-#_84a706138b589bbed5635cba5d6f2660p4@PLAT
8.4e-26FFCP PHASE2:Hg19::chr7:93515840..93515856,-#_fb8c6ba6d41813f36e376174d0ca4a60p@chr7:93515840..93515856, -
8.4e-26FFCP PHASE1:Hg19::chr7:93515840..93515856,-#_fb8c6ba6d41813f36e376174d0ca4a60p@chr7:93515840..93515856, -
2.89e-25FFCP PHASE2:Hg19::chr9:6257179..6257191,+#_dc0024d664057cc3982b7976dd521010p@chr9:6257179..6257191, +
2.89e-25FFCP PHASE1:Hg19::chr9:6257179..6257191,+#_dc0024d664057cc3982b7976dd521010p@chr9:6257179..6257191, +
3.95e-25FFCP PHASE1:Hg19::chr8:42044977..42044996,-#_cc3c741e1acbb174de74d07b61dcfa32p@chr8:42044977..42044996, -
3.95e-25FFCP PHASE2:Hg19::chr8:42044977..42044996,-#_cc3c741e1acbb174de74d07b61dcfa32p@chr8:42044977..42044996, -
4.18e-25FFCP PHASE1:Hg19::chr21:28216589..28216607,-#_48695fa96ccbb3155279c2b6a0e09d64p2@ADAMTS1
4.18e-25FFCP PHASE2:Hg19::chr21:28216589..28216607,-#_48695fa96ccbb3155279c2b6a0e09d64p2@ADAMTS1
1.2e-24FFCP PHASE1:Hg19::chr3:112081052..112081065,-#_c750c1ebb88d918f99b08a32f19358f4p@chr3:112081052..112081065, -
1.2e-24FFCP PHASE2:Hg19::chr3:112081052..112081065,-#_c750c1ebb88d918f99b08a32f19358f4p@chr3:112081052..112081065, -
2.08e-24FFCP PHASE1:Hg19::chr3:67141193..67141198,+#_7503719273af841a4c730bba72ff47b6p@chr3:67141193..67141198, +
2.08e-24FFCP PHASE2:Hg19::chr3:67141193..67141198,+#_7503719273af841a4c730bba72ff47b6p@chr3:67141193..67141198, +
4.08e-24FFCP PHASE1:Hg19::chr8:122653115..122653124,-#_ce75a09d48a99e391e10766b5d30688dp7@HAS2
4.08e-24FFCP PHASE2:Hg19::chr8:122653115..122653124,-#_ce75a09d48a99e391e10766b5d30688dp7@HAS2
4.76e-24FFCP PHASE1:Hg19::chr9:6256728..6256739,+#_ab4fcadb54edc92bf0106eb589c912b7p@chr9:6256728..6256739, +
4.76e-24FFCP PHASE2:Hg19::chr9:6256728..6256739,+#_ab4fcadb54edc92bf0106eb589c912b7p@chr9:6256728..6256739, +
6.41e-24FFCP PHASE2:Hg19::chr2:224839877..224839882,+#_fdc05fa4fe628d6cebf5877c56f56a37p@chr2:224839877..224839882, +
6.41e-24FFCP PHASE1:Hg19::chr2:224839877..224839882,+#_fdc05fa4fe628d6cebf5877c56f56a37p@chr2:224839877..224839882, +