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CL:0002598

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Name:bronchial smooth muscle cell
Namespace:FANTOM
Xrefs:
links:
BTO:0004402
Created by:tmeehan
Creation date:2011-03-06T05:46:39Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000192(smooth muscle cell)
part_of:UBERON:0002185(bronchus)



Children


derives from:FF:0000179 (human bronchial smooth muscle cell sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002598 (bronchial smooth muscle cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.59e-34FFCP PHASE1:Hg19::chr16:72107139..72107149,+#_c30b27e8aed044ff98a8873d49e11bcdp@chr16:72107139..72107149, +
2.59e-34FFCP PHASE2:Hg19::chr16:72107139..72107149,+#_c30b27e8aed044ff98a8873d49e11bcdp@chr16:72107139..72107149, +
7.05e-34FFCP PHASE2:Hg19::chr17:76824975..76824978,-#_de64e7224258f062346d2552699aa86ep@chr17:76824975..76824978, -
7.05e-34FFCP PHASE1:Hg19::chr17:76824975..76824978,-#_de64e7224258f062346d2552699aa86ep@chr17:76824975..76824978, -
8.39e-34FFCP PHASE2:Hg19::chr17:59479934..59479943,+#_f77138cceb472ab7067a97f7c3b52350p@chr17:59479934..59479943, +
8.39e-34FFCP PHASE1:Hg19::chr17:59479934..59479943,+#_f77138cceb472ab7067a97f7c3b52350p@chr17:59479934..59479943, +
7.14e-26FFCP PHASE1:Hg19::chr6:134210772..134210782,+#_dc0db6bdf6e3d8f1126fdbc9295950c2p8@TCF21
7.14e-26FFCP PHASE2:Hg19::chr6:134210772..134210782,+#_dc0db6bdf6e3d8f1126fdbc9295950c2p8@TCF21
7.14e-26FFCP PHASE2:Hg19::chr17:59533618..59533656,+#_dc0db6bdf6e3d8f1126fdbc9295950c2p2@TBX4
7.14e-26FFCP PHASE1:Hg19::chr17:59533618..59533656,+#_dc0db6bdf6e3d8f1126fdbc9295950c2p2@TBX4
9.18e-26FFCP PHASE1:Hg19::chr2:191834349..191834358,-#_6eb3e94d09e66947388c258743505dd6p@chr2:191834349..191834358, -
9.18e-26FFCP PHASE2:Hg19::chr2:191834349..191834358,-#_6eb3e94d09e66947388c258743505dd6p@chr2:191834349..191834358, -
2.08e-21FFCP PHASE2:Hg19::chr17:46671154..46671167,-#_8788fcbc311caa4b719e751f4c2b92c1p4@HOXB5
2.08e-21FFCP PHASE1:Hg19::chr17:46671154..46671167,-#_8788fcbc311caa4b719e751f4c2b92c1p4@HOXB5
5.48e-18FFCP PHASE2:Hg19::chr7:143079562..143079573,+#_692e09de780cf9b725b928f837efcd92p39@ZYX
5.48e-18FFCP PHASE1:Hg19::chr7:143079562..143079573,+#_692e09de780cf9b725b928f837efcd92p39@ZYX
5.82e-18FFCP PHASE1:Hg19::chr12:114845834..114845848,-#_61bd635bcb707e468f5bbfd6078efe71p5@TBX5
5.82e-18FFCP PHASE2:Hg19::chr12:114845834..114845848,-#_61bd635bcb707e468f5bbfd6078efe71p5@TBX5
1.27e-17FFCP PHASE1:Hg19::chr15:33384561..33384569,-#_934857aadc4ffab3b77c504a6b7c37b7p@chr15:33384561..33384569, -
1.27e-17FFCP PHASE2:Hg19::chr15:33384561..33384569,-#_934857aadc4ffab3b77c504a6b7c37b7p@chr15:33384561..33384569, -
3.1e-17FFCP PHASE2:Hg19::chr15:33384583..33384602,-#_da2830665bea9107a9c5213714edc15f-, p@chr15:33384583..33384602
3.1e-17FFCP PHASE1:Hg19::chr15:33384583..33384602,-#_da2830665bea9107a9c5213714edc15fp@chr15:33384583..33384602, -
7.31e-16FFCP PHASE2:Hg19::chr17:46670845..46670856,-#_c6c4986fa790b94098160235799b4868p8@AB464575
7.31e-16FFCP PHASE1:Hg19::chr17:46670845..46670856,-#_c6c4986fa790b94098160235799b4868p8@AB464575
1.33e-15FFCP PHASE2:Hg19::chr3:123518853..123518862,-#_9b6b7bf4b57bb356c36dd0db47772ac4p48@MYLK
1.33e-15FFCP PHASE1:Hg19::chr3:123518853..123518862,-#_9b6b7bf4b57bb356c36dd0db47772ac4p48@MYLK
2.05e-15FFCP PHASE1:Hg19::chr2:102511066..102511072,+#_b2fc6cefc002571722e0fa2133931ca4p@chr2:102511066..102511072, +
2.05e-15FFCP PHASE2:Hg19::chr2:102511066..102511072,+#_b2fc6cefc002571722e0fa2133931ca4p@chr2:102511066..102511072, +
2.74e-15FFCP PHASE2:Hg19::chr20:257430..257434,-#_491afed082978eb86647e6fa1778f085p@chr20:257430..257434, -
2.74e-15FFCP PHASE1:Hg19::chr20:257430..257434,-#_491afed082978eb86647e6fa1778f085p@chr20:257430..257434, -
9.74e-15FFCP PHASE1:Hg19::chr22:41957054..41957063,+#_d1145f609feafd56448a8eead87feb7ep4@CSDC2
9.74e-15FFCP PHASE2:Hg19::chr22:41957054..41957063,+#_d1145f609feafd56448a8eead87feb7ep4@CSDC2
1.04e-14FFCP PHASE1:Hg19::chr3:123518925..123518939,-#_c2ac64fc0cdf1fc51cf57af3ae926bfcp29@MYLK
1.04e-14FFCP PHASE2:Hg19::chr3:123518925..123518939,-#_c2ac64fc0cdf1fc51cf57af3ae926bfcp29@MYLK
7.3e-14FFCP PHASE2:Hg19::chr7:87835758..87835769,-#_95f9da18971dc5c7a291f675f4eea0a3p6@SRI
7.3e-14FFCP PHASE1:Hg19::chr7:87835758..87835769,-#_95f9da18971dc5c7a291f675f4eea0a3p6@SRI
9.4e-14FFCP PHASE2:Hg19::chr15:33384526..33384543,-#_0e19b6f8f41a3b4cfcdb9059afe7a5c8p@chr15:33384526..33384543, -
9.4e-14FFCP PHASE1:Hg19::chr15:33384526..33384543,-#_0e19b6f8f41a3b4cfcdb9059afe7a5c8p@chr15:33384526..33384543, -
1.37e-13FFCP PHASE2:Hg19::chr17:38324198..38324204,+#_24fd3e2307a1da90410283ced762e891p7@CASC3
1.37e-13FFCP PHASE1:Hg19::chr17:38324198..38324204,+#_24fd3e2307a1da90410283ced762e891p7@CASC3
1.55e-13FFCP PHASE2:Hg19::chr19:36245514..36245521,-#_8d4fcee79aa38b49d361f855f1c3be2bp6@CU679244
1.55e-13FFCP PHASE1:Hg19::chr19:36245514..36245521,-#_8d4fcee79aa38b49d361f855f1c3be2bp6@CU679244
2.12e-13FFCP PHASE2:Hg19::chr12:114845970..114846000,+#_5450ee8d99625df4394bae1e909482ecp1@LOC255480
2.12e-13FFCP PHASE1:Hg19::chr12:114845970..114846000,+#_5450ee8d99625df4394bae1e909482ecp1@LOC255480
3.9e-13FFCP PHASE1:Hg19::chr5:92923453..92923465,+#_b2f2de79bcdfc275cfe5e0813323fe2bp@chr5:92923453..92923465, +
3.9e-13FFCP PHASE2:Hg19::chr5:92923453..92923465,+#_b2f2de79bcdfc275cfe5e0813323fe2bp@chr5:92923453..92923465, +
4.89e-12FFCP PHASE2:Hg19::chr17:46670939..46670958,-#_618a6948d8785c803b75d31e831ab1e8p5@AB464575
4.89e-12FFCP PHASE1:Hg19::chr17:46670939..46670958,-#_618a6948d8785c803b75d31e831ab1e8p5@AB464575
6.49e-12FFCP PHASE2:Hg19::chr12:114845810..114845824,-#_103d8ca428ebae617fd5f7d46230b3a3p1@TBX5
6.49e-12FFCP PHASE1:Hg19::chr12:114845810..114845824,-#_103d8ca428ebae617fd5f7d46230b3a3p1@TBX5
6.89e-12FFCP PHASE1:Hg19::chr3:123518900..123518913,-#_8c6fd28ddf1a60231d5e8b21327f4891p18@MYLK
6.89e-12FFCP PHASE2:Hg19::chr3:123518900..123518913,-#_8c6fd28ddf1a60231d5e8b21327f4891p18@MYLK
1.38e-11FFCP PHASE1:Hg19::chr16:67313160..67313175,-#_41e0b69325a56ab133f0042c02ea3a46p@chr16:67313160..67313175, -
1.38e-11FFCP PHASE2:Hg19::chr16:67313160..67313175,-#_41e0b69325a56ab133f0042c02ea3a46p@chr16:67313160..67313175, -
1.42e-11FFCP PHASE1:Hg19::chr17:46627597..46627646,+#_685745156d6e21097ff92c4e08479297p@chr17:46627597..46627646, +
1.42e-11FFCP PHASE2:Hg19::chr17:46627597..46627646,+#_685745156d6e21097ff92c4e08479297p@chr17:46627597..46627646, +
1.81e-11FFCP PHASE1:Hg19::chr3:123519062..123519090,-#_959c437e54486fbb71e80a2e1ee480a1p14@MYLK
1.81e-11FFCP PHASE2:Hg19::chr3:123519062..123519090,-#_959c437e54486fbb71e80a2e1ee480a1p14@MYLK
2.02e-11FFCP PHASE1:Hg19::chr17:59479775..59479790,+#_9ae09460059fffd47583bb4be6e6cde9p@chr17:59479775..59479790, +
2.02e-11FFCP PHASE2:Hg19::chr17:59479775..59479790,+#_9ae09460059fffd47583bb4be6e6cde9p@chr17:59479775..59479790, +
2.23e-11FFCP PHASE2:Hg19::chr6:56013664..56013696,-#_707fc5dcfa9f8c5a551e044bdc06537bp@chr6:56013664..56013696, -
2.23e-11FFCP PHASE1:Hg19::chr6:56013664..56013696,-#_707fc5dcfa9f8c5a551e044bdc06537bp@chr6:56013664..56013696, -
3.46e-11FFCP PHASE1:Hg19::chr3:45067642..45067645,+#_62842d21637905fa1da919a762f6de41p7@CLEC3B
3.46e-11FFCP PHASE2:Hg19::chr3:45067642..45067645,+#_62842d21637905fa1da919a762f6de41p7@CLEC3B
3.7e-11FFCP PHASE2:Hg19::chr6:90378042..90378060,-#_5b446bf724e7ea88e9a07d9a98df57fap@chr6:90378042..90378060, -
3.7e-11FFCP PHASE1:Hg19::chr6:90378042..90378060,-#_5b446bf724e7ea88e9a07d9a98df57fap@chr6:90378042..90378060, -
4.09e-11FFCP PHASE1:Hg19::chr6:90378015..90378029,-#_c26d2c1fb6c9b300c7ca6b12a2ae94dfp@chr6:90378015..90378029, -
4.09e-11FFCP PHASE2:Hg19::chr6:90378015..90378029,-#_c26d2c1fb6c9b300c7ca6b12a2ae94dfp@chr6:90378015..90378029, -
4.52e-11FFCP PHASE2:Hg19::chr17:59474831..59474844,+#_13b233d3940227333128a8c612ad097dp@chr17:59474831..59474844, +
4.52e-11FFCP PHASE1:Hg19::chr17:59474831..59474844,+#_13b233d3940227333128a8c612ad097dp@chr17:59474831..59474844, +
1.59e-10FFCP PHASE1:Hg19::chr3:123518799..123518836,-#_e7fe299f65e7be8f3a09ff95f4d7e2d4p16@MYLK
1.59e-10FFCP PHASE2:Hg19::chr3:123518799..123518836,-#_e7fe299f65e7be8f3a09ff95f4d7e2d4p16@MYLK
1.76e-10FFCP PHASE2:Hg19::chr17:59529743..59529798,+#_c29db4dcc10b61deafcaab512966fd0dp1@TBX4
1.76e-10FFCP PHASE1:Hg19::chr17:59529743..59529798,+#_c29db4dcc10b61deafcaab512966fd0dp1@TBX4
1.89e-10FFCP PHASE2:Hg19::chr7:128499262..128499273,+#_4a44782d449e1a008d0a83cd700ca4f6+, p@chr7:128499262..128499273
1.89e-10FFCP PHASE1:Hg19::chr12:10856713..10856723,-#_4a44782d449e1a008d0a83cd700ca4f6p23@CSDA
1.89e-10FFCP PHASE1:Hg19::chr7:128499262..128499273,+#_4a44782d449e1a008d0a83cd700ca4f6p@chr7:128499262..128499273, +
1.89e-10FFCP PHASE2:Hg19::chr12:10856713..10856723,-#_4a44782d449e1a008d0a83cd700ca4f6p23@CSDA
2.32e-10FFCP PHASE1:Hg19::chr21:47648451..47648462,-#_181f2992652067745ae76bcac8ae2053p3@LSS
2.32e-10FFCP PHASE2:Hg19::chr21:47648451..47648462,-#_181f2992652067745ae76bcac8ae2053p3@LSS
2.49e-10FFCP PHASE1:Hg19::chr11:114121964..114121973,+#_f65813ab080a7c8e839218ac570d5f91p@chr11:114121964..114121973, +
2.49e-10FFCP PHASE2:Hg19::chr11:114121964..114121973,+#_f65813ab080a7c8e839218ac570d5f91p@chr11:114121964..114121973, +
2.72e-10FFCP PHASE2:Hg19::chr2:47452905..47452914,+#_aa2f36d5bf51940de85a884601ec3b44p1@ENST00000444361
2.72e-10FFCP PHASE1:Hg19::chr2:47452905..47452914,+#_aa2f36d5bf51940de85a884601ec3b44p1@ENST00000444361
3.58e-10FFCP PHASE2:Hg19::chr4:1160761..1160774,-#_9279f2b1054a4b8afb9c75f810eb315ep@chr4:1160761..1160774, -
3.58e-10FFCP PHASE1:Hg19::chr4:1160761..1160774,-#_9279f2b1054a4b8afb9c75f810eb315ep@chr4:1160761..1160774, -
3.91e-10FFCP PHASE2:Hg19::chr17:46675344..46675355,-#_4e4ccc6a13d39cc1ff0951cc8dc8d430p9@HOXB6
3.91e-10FFCP PHASE1:Hg19::chr17:46675344..46675355,-#_4e4ccc6a13d39cc1ff0951cc8dc8d430p9@HOXB6
4.17e-10FFCP PHASE1:Hg19::chr15:74218799..74218816,-#_d3fdf38b16a87b6f54baa9fe517fbacbp@chr15:74218799..74218816, -
4.17e-10FFCP PHASE2:Hg19::chr15:74218799..74218816,-#_d3fdf38b16a87b6f54baa9fe517fbacb-, p@chr15:74218799..74218816
9.82e-10FFCP PHASE2:Hg19::chr11:307929..307961,+#_6a91d09f15f287472d8c5f90470877b3p4@IFITM2
9.82e-10FFCP PHASE1:Hg19::chr11:307929..307961,+#_6a91d09f15f287472d8c5f90470877b3p4@IFITM2
1.02e-9FFCP PHASE2:Hg19::chr17:46630377..46630385,+#_cba8b711b84cda94f3441038417622fdp@chr17:46630377..46630385, +
1.02e-9FFCP PHASE1:Hg19::chr17:46630377..46630385,+#_cba8b711b84cda94f3441038417622fdp@chr17:46630377..46630385, +
1.33e-9FFCP PHASE2:Hg19::chr12:7187819..7187830,-#_8a631c98d577f956e588dfdeb4f7a985p@chr12:7187819..7187830, -
1.33e-9FFCP PHASE1:Hg19::chr12:7187819..7187830,-#_8a631c98d577f956e588dfdeb4f7a985p@chr12:7187819..7187830, -
1.44e-9FFCP PHASE2:Hg19::chr5:149425247..149425250,+#_ab2ca92cbfbd14bc247d91b5f85683a5p@chr5:149425247..149425250, +
1.44e-9FFCP PHASE1:Hg19::chr5:149425247..149425250,+#_ab2ca92cbfbd14bc247d91b5f85683a5p@chr5:149425247..149425250, +
1.46e-9FFCP PHASE2:Hg19::chr17:46671504..46671541,-#_3f62023cab122f0a3a3cc6ac690d0d43p2@HOXB5
1.46e-9FFCP PHASE1:Hg19::chr17:46671504..46671541,-#_3f62023cab122f0a3a3cc6ac690d0d43p2@HOXB5