Personal tools

CL:0002622

From FANTOM5_SSTAR

Jump to: navigation, search
Name:prostate stromal cell
Namespace:FANTOM
Definition:"A stromal cell of the prostate." [GOC:tfm]
Xrefs:
links:
BTO:0003972
Created by:tmeehan
Creation date:2011-03-14T02:11:10Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000499(stromal cell)
part_of:UBERON:0002367(prostate gland)



Children


derives from:FF:0000277 (human prostate stromal cell sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002622 (prostate stromal cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
6.24e-88FFCP PHASE2:Hg19::chr4:120437504..120437512,-#_524ff9a69c508bdca8ebf46218341d3dp@chr4:120437504..120437512, -
6.24e-88FFCP PHASE1:Hg19::chr4:120437504..120437512,-#_524ff9a69c508bdca8ebf46218341d3dp@chr4:120437504..120437512, -
7.51e-74FFCP PHASE2:Hg19::chr14:33088589..33088594,+#_642651903218edc2c54e35be0d8a23c5p@chr14:33088589..33088594, +
7.51e-74FFCP PHASE1:Hg19::chr14:33088589..33088594,+#_642651903218edc2c54e35be0d8a23c5p@chr14:33088589..33088594, +
1.71e-66FFCP PHASE2:Hg19::chr4:120546882..120546885,-#_a4401e2ce99e8e17dd55fec567032796p@chr4:120546882..120546885, -
1.71e-66FFCP PHASE1:Hg19::chr4:120546882..120546885,-#_a4401e2ce99e8e17dd55fec567032796p@chr4:120546882..120546885, -
1.05e-45FFCP PHASE1:Hg19::chr1:246147829..246147864,-#_9cf7e44ffe981d649ea4bc918bc95cc5p@chr1:246147829..246147864, -
1.05e-45FFCP PHASE2:Hg19::chr1:246147829..246147864,-#_9cf7e44ffe981d649ea4bc918bc95cc5p@chr1:246147829..246147864, -
1.49e-38FFCP PHASE2:Hg19::chr3:123518853..123518862,-#_ab83cbed65a5aee3ec8c0f6f8435ddc3p48@MYLK
1.49e-38FFCP PHASE1:Hg19::chr3:123518853..123518862,-#_ab83cbed65a5aee3ec8c0f6f8435ddc3p48@MYLK
1.8e-38FFCP PHASE2:Hg19::chr4:120549931..120549938,-#_ac4dcdb09243f8557851338bd0bc5cfap21@PDE5A
1.8e-38FFCP PHASE1:Hg19::chr4:120549931..120549938,-#_ac4dcdb09243f8557851338bd0bc5cfap21@PDE5A
1.11e-35FFCP PHASE2:Hg19::chr7:136759451..136759469,+#_8daa286727bef2eb00c4ca551f6a2ffep@chr7:136759451..136759469, +
1.11e-35FFCP PHASE1:Hg19::chr7:136759451..136759469,+#_8daa286727bef2eb00c4ca551f6a2ffe+, p@chr7:136759451..136759469
1.47e-30FFCP PHASE1:Hg19::chr12:52473502..52473510,+#_3da3629b8e19260555f73235acd7a8b3p2@ENST00000546390, p2@uc009zme.1
1.47e-30FFCP PHASE2:Hg19::chr12:52473502..52473510,+#_3da3629b8e19260555f73235acd7a8b3p2@ENST00000546390, p2@uc009zme.1
1.98e-30FFCP PHASE1:Hg19::chr4:177190139..177190150,-#_9e28fe3520da3a1bf0bc89fb7cf9a115p6@ASB5
1.98e-30FFCP PHASE2:Hg19::chr4:177190139..177190150,-#_9e28fe3520da3a1bf0bc89fb7cf9a115p6@ASB5
1.06e-27FFCP PHASE2:Hg19::chr2:238092965..238092980,-#_904cbff250721946258ab51dfb30abc4p@chr2:238092965..238092980, -
1.06e-27FFCP PHASE1:Hg19::chr2:238092965..238092980,-#_904cbff250721946258ab51dfb30abc4p@chr2:238092965..238092980, -
7.93e-25FFCP PHASE1:Hg19::chr7:81319728..81319744,-#_445d3922b8e8290b43841f12936e39a2p@chr7:81319728..81319744, -
7.93e-25FFCP PHASE2:Hg19::chr7:81319728..81319744,-#_445d3922b8e8290b43841f12936e39a2p@chr7:81319728..81319744, -
4.97e-24FFCP PHASE1:Hg19::chr4:120549834..120549846,-#_5f6b88e37bd09ae6c19e78f320ec15fbp15@PDE5A
4.97e-24FFCP PHASE2:Hg19::chr4:120549834..120549846,-#_5f6b88e37bd09ae6c19e78f320ec15fbp15@PDE5A
2.46e-23FFCP PHASE2:Hg19::chr3:123518704..123518728,-#_1d66563ba29ddde72efdd9fe3cdacb34p28@MYLK
2.46e-23FFCP PHASE1:Hg19::chr3:123518704..123518728,-#_1d66563ba29ddde72efdd9fe3cdacb34p28@MYLK
3.27e-23FFCP PHASE2:Hg19::chr2:203560192..203560201,+#_33ca6228a574acb15a4dfc377fdc004ap11@FAM117B
3.27e-23FFCP PHASE1:Hg19::chr2:203560192..203560201,+#_33ca6228a574acb15a4dfc377fdc004ap11@FAM117B
4.09e-23FFCP PHASE1:Hg19::chr1:118363660..118363674,-#_b583b6852862645d04e7611b549c2de7p@chr1:118363660..118363674, -
4.09e-23FFCP PHASE2:Hg19::chr1:118363660..118363674,-#_b583b6852862645d04e7611b549c2de7p@chr1:118363660..118363674, -
5.63e-23FFCP PHASE2:Hg19::chr4:1165260..1165276,-#_b9f5a42233795c46ad1b2518047cfef0p17@SPON2
5.63e-23FFCP PHASE1:Hg19::chr4:1165260..1165276,-#_b9f5a42233795c46ad1b2518047cfef0p17@SPON2
8.19e-23FFCP PHASE2:Hg19::chr21:46767473..46767491,+#_88b69e0428a99eeec144d608f9f1aa8ep@chr21:46767473..46767491, +
8.19e-23FFCP PHASE1:Hg19::chr21:46767473..46767491,+#_88b69e0428a99eeec144d608f9f1aa8ep@chr21:46767473..46767491, +
1.72e-22FFCP PHASE1:Hg19::chr8:119945232..119945244,-#_8f5f6b40ee5d23d4329283e9332cdde1p8@TNFRSF11B
1.72e-22FFCP PHASE2:Hg19::chr8:119945232..119945244,-#_8f5f6b40ee5d23d4329283e9332cdde1p8@TNFRSF11B
8.23e-22FFCP PHASE2:Hg19::chr3:123518925..123518939,-#_bb6c6de7e482dc129a6eaa391d816e36p29@MYLK
8.23e-22FFCP PHASE1:Hg19::chr3:123518925..123518939,-#_bb6c6de7e482dc129a6eaa391d816e36p29@MYLK
2.41e-21FFCP PHASE1:Hg19::chr4:120548828..120548836,-#_55f2a522030ceadd76ad026e2cff1ed3p17@PDE5A
2.41e-21FFCP PHASE2:Hg19::chr4:120548828..120548836,-#_55f2a522030ceadd76ad026e2cff1ed3p17@PDE5A
5.43e-21FFCP PHASE2:Hg19::chr8:120079417..120079436,+#_fa52ed84ae8dc1d46f5986552486a064p2@COLEC10
5.43e-21FFCP PHASE1:Hg19::chr8:120079417..120079436,+#_fa52ed84ae8dc1d46f5986552486a064p2@COLEC10
8.16e-21FFCP PHASE2:Hg19::chr18:20275091..20275099,+#_36fdc0ef964a925b3b8617060392454dp@chr18:20275091..20275099, +
8.16e-21FFCP PHASE1:Hg19::chr18:20275091..20275099,+#_36fdc0ef964a925b3b8617060392454dp@chr18:20275091..20275099, +
3.12e-20FFCP PHASE1:Hg19::chr3:170150547..170150552,+#_ae0d1326dbe731c3a1f5af29413789cfp@chr3:170150547..170150552, +
3.12e-20FFCP PHASE2:Hg19::chr3:170150547..170150552,+#_ae0d1326dbe731c3a1f5af29413789cfp@chr3:170150547..170150552, +
6.5e-20FFCP PHASE1:Hg19::chr12:89842992..89843005,-#_034dcc0fe8371cff74e0ff91ac17da32p@chr12:89842992..89843005, -
6.5e-20FFCP PHASE2:Hg19::chr12:89842992..89843005,-#_034dcc0fe8371cff74e0ff91ac17da32p@chr12:89842992..89843005, -
7.16e-20FFCP PHASE1:Hg19::chr14:52066745..52066774,-#_b94e8396f522e6d1ea5b5beafb94987fp2@ENST00000556617
7.16e-20FFCP PHASE2:Hg19::chr14:52066745..52066774,-#_b94e8396f522e6d1ea5b5beafb94987fp2@ENST00000556617
8.96e-20FFCP PHASE1:Hg19::chr9:101832450..101832468,+#_f2109dafe3ba8e2e15021b06d61ed454p@chr9:101832450..101832468, +
8.96e-20FFCP PHASE2:Hg19::chr9:101832450..101832468,+#_f2109dafe3ba8e2e15021b06d61ed454p@chr9:101832450..101832468, +
5.54e-19FFCP PHASE1:Hg19::chr14:54418733..54418774,-#_f8544b8b13646f515b65b048a69da2b2p7@BMP4
5.54e-19FFCP PHASE2:Hg19::chr14:54418733..54418774,-#_f8544b8b13646f515b65b048a69da2b2p7@BMP4
6.63e-19FFCP PHASE2:Hg19::chr2:114300263..114300269,-#_8d43b76a95ce45d45ca76b526b47098fp1@ENST00000416758
6.63e-19FFCP PHASE1:Hg19::chr2:114300263..114300269,-#_8d43b76a95ce45d45ca76b526b47098fp1@ENST00000416758
1.04e-18FFCP PHASE1:Hg19::chr3:158390171..158390180,-#_e232701eeab504681392eff4bd8607bfp3@LXN
1.04e-18FFCP PHASE2:Hg19::chr1:21025019..21025038,-#_e232701eeab504681392eff4bd8607bfp8@KIF17
1.04e-18FFCP PHASE1:Hg19::chr1:21025019..21025038,-#_e232701eeab504681392eff4bd8607bfp8@KIF17
1.04e-18FFCP PHASE2:Hg19::chr3:158390171..158390180,-#_e232701eeab504681392eff4bd8607bfp3@LXN
1.36e-18FFCP PHASE1:Hg19::chr16:86547373..86547391,+#_8450b10fb1476d3cb0f6e46a109addacp@chr16:86547373..86547391, +
1.36e-18FFCP PHASE2:Hg19::chr16:86547373..86547391,+#_8450b10fb1476d3cb0f6e46a109addacp@chr16:86547373..86547391, +
8.0e-18FFCP PHASE2:Hg19::chr6:134210772..134210782,+#_5d2d14b2573dadc1945cc33ec59752e9p8@TCF21
8.0e-18FFCP PHASE1:Hg19::chr6:134210772..134210782,+#_5d2d14b2573dadc1945cc33ec59752e9p8@TCF21
1.08e-17FFCP PHASE1:Hg19::chr16:86229916..86229943,+#_d10922f7a147c1fa477b07a4f07b1577p@chr16:86229916..86229943, +
1.08e-17FFCP PHASE2:Hg19::chr16:86229916..86229943,+#_d10922f7a147c1fa477b07a4f07b1577p@chr16:86229916..86229943, +
1.6e-17FFCP PHASE1:Hg19::chr9:101706279..101706284,+#_cc0669b93e9be0db6ddb085794f12f90p13@COL15A1
1.6e-17FFCP PHASE2:Hg19::chr9:101706279..101706284,+#_cc0669b93e9be0db6ddb085794f12f90p13@COL15A1
1.7e-17FFCP PHASE1:Hg19::chr6:64517213..64517228,+#_de7829c5c24c1dac9329ed509d843008p@chr6:64517213..64517228, +
1.7e-17FFCP PHASE2:Hg19::chr6:64517213..64517228,+#_de7829c5c24c1dac9329ed509d843008p@chr6:64517213..64517228, +
1.79e-17FFCP PHASE1:Hg19::chr4:1165106..1165131,-#_fdd09674d1b429e8fff9a41336665590p15@SPON2
1.79e-17FFCP PHASE2:Hg19::chr4:1165106..1165131,-#_fdd09674d1b429e8fff9a41336665590p15@SPON2
3.03e-17FFCP PHASE1:Hg19::chr8:120079478..120079499,+#_324d4333e3bc8365b737a4ee4451c45cp1@COLEC10
3.03e-17FFCP PHASE2:Hg19::chr8:120079478..120079499,+#_324d4333e3bc8365b737a4ee4451c45cp1@COLEC10
3.48e-17FFCP PHASE2:Hg19::chr3:123518900..123518913,-#_3c619fa4ce5faea50b041a4161de7dcbp18@MYLK
3.48e-17FFCP PHASE1:Hg19::chr3:123518900..123518913,-#_3c619fa4ce5faea50b041a4161de7dcbp18@MYLK
5.22e-17FFCP PHASE2:Hg19::chr10:28033614..28033628,-#_c0c4aa06305088d455bc8f6bb078f387p@chr10:28033614..28033628, -
5.22e-17FFCP PHASE1:Hg19::chr10:28033614..28033628,-#_c0c4aa06305088d455bc8f6bb078f387p@chr10:28033614..28033628, -
1.23e-16FFCP PHASE2:Hg19::chr3:123458560..123458569,-#_e7706e2c116b076605e7e89c10afe401p@chr3:123458560..123458569, -
1.23e-16FFCP PHASE1:Hg19::chr3:123458560..123458569,-#_e7706e2c116b076605e7e89c10afe401p@chr3:123458560..123458569, -
1.97e-16FFCP PHASE2:Hg19::chr3:123519062..123519090,-#_9acfe27e135bacab650e5b70cb90d7b4p14@MYLK
1.97e-16FFCP PHASE1:Hg19::chr3:123519062..123519090,-#_9acfe27e135bacab650e5b70cb90d7b4p14@MYLK
2.26e-16FFCP PHASE1:Hg19::chr1:21766691..21766715,+#_a29e7ef1c8506af26f1e933dce24a0cep3@NBPF3
2.26e-16FFCP PHASE2:Hg19::chr1:21766691..21766715,+#_a29e7ef1c8506af26f1e933dce24a0cep3@NBPF3
2.82e-16FFCP PHASE1:Hg19::chr16:86256667..86256687,-#_2dc479150bd42ce8cfd09dede3516d76p@chr16:86256667..86256687, -
2.82e-16FFCP PHASE2:Hg19::chr16:86256667..86256687,-#_2dc479150bd42ce8cfd09dede3516d76p@chr16:86256667..86256687, -
3.98e-16FFCP PHASE1:Hg19::chr4:1164305..1164316,-#_f72073ffe8b7a8682d607ef298f9285cp@chr4:1164305..1164316, -
3.98e-16FFCP PHASE2:Hg19::chr4:1164305..1164316,-#_f72073ffe8b7a8682d607ef298f9285cp@chr4:1164305..1164316, -
4.02e-16FFCP PHASE1:Hg19::chr4:1165755..1165774,-#_f986ea15bbd99bda362fa72991f7ab64p12@SPON2
4.02e-16FFCP PHASE2:Hg19::chr4:1165755..1165774,-#_f986ea15bbd99bda362fa72991f7ab64p12@SPON2
5.17e-16FFCP PHASE1:Hg19::chr2:28524175..28524215,+#_9ff41d1993a9bdd20d2a0615aa6dfbafp@chr2:28524175..28524215, +
5.17e-16FFCP PHASE2:Hg19::chr2:28524175..28524215,+#_9ff41d1993a9bdd20d2a0615aa6dfbafp@chr2:28524175..28524215, +
6.63e-16FFCP PHASE1:Hg19::chr16:86542381..86542392,-#_97afa61d3f89ad6de04e635137212c6bp1@ENST00000499071
6.63e-16FFCP PHASE2:Hg19::chr16:86542381..86542392,-#_97afa61d3f89ad6de04e635137212c6bp1@ENST00000499071
1.22e-15FFCP PHASE1:Hg19::chr7:136553573..136553582,+#_552226e6a136a889cf992b9bd665dd47p6@CHRM2
1.22e-15FFCP PHASE2:Hg19::chr7:136553573..136553582,+#_552226e6a136a889cf992b9bd665dd47p6@CHRM2
2.63e-15FFCP PHASE2:Hg19::chr7:79082186..79082203,+#_c5cb828e67d0d03e7c930f9adeff5505p8@MAGI2-AS3
2.63e-15FFCP PHASE1:Hg19::chr7:79082186..79082203,+#_c5cb828e67d0d03e7c930f9adeff5505p8@MAGI2-AS3
3.11e-15FFCP PHASE1:Hg19::chr3:123518799..123518836,-#_9d3aafd1913506bc1ed62eeb508c6a8dp16@MYLK
3.11e-15FFCP PHASE2:Hg19::chr3:123518799..123518836,-#_9d3aafd1913506bc1ed62eeb508c6a8dp16@MYLK