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DOID:0060058

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Name:lymphoma
Namespace:FANTOM
Definition:"A hematologic cancer that affects lymphocytes that reside in the lymphatic system and in blood-forming organs." [url:http://en.wikipedia.org/wiki/Lymphoma, url:http://www.nlm.nih.gov/medlineplus/lymphoma.html]
Xrefs:
links:

MSH:D008223
NCI:C3208
SNOMEDCT_2010_1_31:118600007
SNOMEDCT_2010_1_31:188676008
SNOMEDCT_2010_1_31:188694002
SNOMEDCT_2010_1_31:188695001
SNOMEDCT_2010_1_31:188704004
SNOMEDCT_2010_1_31:189959002
SNOMEDCT_2010_1_31:189965002
SNOMEDCT_2010_1_31:21964009
SNOMEDCT_2010_1_31:269627002
SNOMEDCT_2010_1_31:414628006
UMLS_CUI:C0024299

UMLS_CUI:C0598798
Synonyms: "lymphoid cancer" EXACT []
Alt_id: DOID:1033
DOID:353

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:2531(hematologic cancer)



Children


is a:DOID:0050743 (mature T-cell and NK-cell neoplasm),DOID:0060060 (non-Hodgkin lymphoma),DOID:707 (B-cell lymphocytic neoplasm)


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0060058 (lymphoma), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.85e-98FFCP PHASE2:Hg19::chr3:31918379..31918390,-#_c3dfdc1f584befab320fd49ba060b413p10@OSBPL10
2.85e-98FFCP PHASE1:Hg19::chr3:31918379..31918390,-#_c3dfdc1f584befab320fd49ba060b413p10@OSBPL10
5.79e-79FFCP PHASE1:Hg19::chr3:31918351..31918363,-#_a854d7d18abb07167ccd84fd625cadabp13@OSBPL10
5.79e-79FFCP PHASE2:Hg19::chr12:113496099..113496108,+#_a854d7d18abb07167ccd84fd625cadabp3@AB384763
5.79e-79FFCP PHASE1:Hg19::chr12:113496099..113496108,+#_a854d7d18abb07167ccd84fd625cadabp3@AB384763
5.79e-79FFCP PHASE2:Hg19::chr3:31918351..31918363,-#_a854d7d18abb07167ccd84fd625cadabp13@OSBPL10
1.49e-64FFCP PHASE2:Hg19::chr12:113495245..113495253,+#_6f65be9d3ab0a6ec31345b13d9cda5e7p5@DTX1
1.49e-64FFCP PHASE1:Hg19::chr12:113495245..113495253,+#_6f65be9d3ab0a6ec31345b13d9cda5e7p5@DTX1
1.84e-63FFCP PHASE2:Hg19::chr5:53467645..53467648,-#_c94d8575fe24bca7c6008dfe5bcdaf3cp@chr5:53467645..53467648, -
1.84e-63FFCP PHASE1:Hg19::chr5:53467645..53467648,-#_c94d8575fe24bca7c6008dfe5bcdaf3cp@chr5:53467645..53467648, -
2.16e-63FFCP PHASE2:Hg19::chr6:88630940..88630960,-#_9ca28450796fb77202d15185510928d5p@chr6:88630940..88630960, -
2.16e-63FFCP PHASE1:Hg19::chr6:88630940..88630960,-#_9ca28450796fb77202d15185510928d5p@chr6:88630940..88630960, -
2.53e-63FFCP PHASE1:Hg19::chr12:113495715..113495725,+#_c59dad41f10e75ed80254b6dcb68b412p8@DTX1
2.53e-63FFCP PHASE2:Hg19::chr12:113495715..113495725,+#_c59dad41f10e75ed80254b6dcb68b412p8@DTX1
2.97e-63FFCP PHASE1:Hg19::chr11:2407318..2407325,+#_aa1128bd46d0344af7b39f9f651692c6p24@CD81
2.97e-63FFCP PHASE2:Hg19::chr11:2407318..2407325,+#_aa1128bd46d0344af7b39f9f651692c6p24@CD81
4.97e-62FFCP PHASE1:Hg19::chr3:31918364..31918375,-#_eef01b37498092f2ec066dae2a19b595p9@OSBPL10
4.97e-62FFCP PHASE2:Hg19::chr3:31918364..31918375,-#_eef01b37498092f2ec066dae2a19b595p9@OSBPL10
6.4e-62FFCP PHASE1:Hg19::chr3:133185620..133185631,+#_ec19b3e7180188b235af668d66a96aa5p@chr3:133185620..133185631, +
6.4e-62FFCP PHASE2:Hg19::chr3:133185620..133185631,+#_ec19b3e7180188b235af668d66a96aa5p@chr3:133185620..133185631, +
1.2e-61FFCP PHASE2:Hg19::chr12:49555310..49555317,+#_1ed6bbf14525677d19ac47e14377e303p@chr12:49555310..49555317, +
1.2e-61FFCP PHASE1:Hg19::chr12:49555310..49555317,+#_1ed6bbf14525677d19ac47e14377e303p@chr12:49555310..49555317, +
1.1e-59FFCP PHASE1:Hg19::chr9:96030936..96030946,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr9:96030936..96030946, -
1.1e-59FFCP PHASE1:Hg19::chr20:42948601..42948615,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr20:42948601..42948615, -
1.1e-59FFCP PHASE1:Hg19::chr1:154838149..154838194,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr1:154838149..154838194, +
1.1e-59FFCP PHASE1:Hg19::chr16:11301814..11301825,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p2@AK127887
1.1e-59FFCP PHASE1:Hg19::chr22:22400945..22400954,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr22:22400945..22400954, -
1.1e-59FFCP PHASE2:Hg19::chr14:33449523..33449537,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr14:33449523..33449537, -
1.1e-59FFCP PHASE2:Hg19::chr1:154838149..154838194,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr1:154838149..154838194, +
1.1e-59FFCP PHASE1:Hg19::chr8:67526476..67526487,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p18@MYBL1
1.1e-59FFCP PHASE2:Hg19::chr3:182129942..182129947,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr3:182129942..182129947, -
1.1e-59FFCP PHASE2:Hg19::chr8:67526476..67526487,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p18@MYBL1
1.1e-59FFCP PHASE1:Hg19::chr12:25179157..25179161,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr12:25179157..25179161, +
1.1e-59FFCP PHASE2:Hg19::chr9:96029287..96029296,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p15@WNK2
1.1e-59FFCP PHASE1:Hg19::chr14:33449523..33449537,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr14:33449523..33449537, -
1.1e-59FFCP PHASE2:Hg19::chr6:149188785..149188792,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr6:149188785..149188792, +
1.1e-59FFCP PHASE2:Hg19::chr12:25157568..25157581,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr12:25157568..25157581, +
1.1e-59FFCP PHASE2:Hg19::chr14:33449543..33449553,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr14:33449543..33449553, -
1.1e-59FFCP PHASE2:Hg19::chr16:11301790..11301804,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p1@AK127887
1.1e-59FFCP PHASE2:Hg19::chr20:42948601..42948615,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7-, p@chr20:42948601..42948615
1.1e-59FFCP PHASE2:Hg19::chr1:6614821..6614842,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p3@NOL9
1.1e-59FFCP PHASE1:Hg19::chr9:96029287..96029296,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p15@WNK2
1.1e-59FFCP PHASE1:Hg19::chr7:106732075..106732086,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p10@PRKAR2B
1.1e-59FFCP PHASE2:Hg19::chr9:96029313..96029322,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p9@WNK2
1.1e-59FFCP PHASE2:Hg19::chr6:150938045..150938069,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr6:150938045..150938069, +
1.1e-59FFCP PHASE1:Hg19::chr14:33449543..33449553,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr14:33449543..33449553, -
1.1e-59FFCP PHASE2:Hg19::chr12:25179157..25179161,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr12:25179157..25179161, +
1.1e-59FFCP PHASE2:Hg19::chr14:33449602..33449615,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr14:33449602..33449615, -
1.1e-59FFCP PHASE2:Hg19::chr16:11301814..11301825,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p2@AK127887
1.1e-59FFCP PHASE1:Hg19::chr9:96029313..96029322,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p9@WNK2
1.1e-59FFCP PHASE1:Hg19::chr3:182129942..182129947,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr3:182129942..182129947, -
1.1e-59FFCP PHASE2:Hg19::chr21:36430055..36430067,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr21:36430055..36430067, +
1.1e-59FFCP PHASE2:Hg19::chr16:17076780..17076785,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr16:17076780..17076785, +
1.1e-59FFCP PHASE2:Hg19::chr22:22400945..22400954,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr22:22400945..22400954, -
1.1e-59FFCP PHASE1:Hg19::chr3:187694197..187694208,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p3@ENST00000446091, p3@uc003frr.1
1.1e-59FFCP PHASE2:Hg19::chr9:96030923..96030932,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr9:96030923..96030932, -
1.1e-59FFCP PHASE1:Hg19::chr20:46040936..46040941,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p5@ENST00000437920
1.1e-59FFCP PHASE2:Hg19::chr7:106732075..106732086,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p10@PRKAR2B
1.1e-59FFCP PHASE1:Hg19::chr15:52043573..52043583,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p16@LYSMD2
1.1e-59FFCP PHASE1:Hg19::chr14:33449602..33449615,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr14:33449602..33449615, -
1.1e-59FFCP PHASE1:Hg19::chr12:2296630..2296642,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr12:2296630..2296642, +
1.1e-59FFCP PHASE1:Hg19::chr3:133185639..133185654,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr3:133185639..133185654, +
1.1e-59FFCP PHASE2:Hg19::chr3:133185639..133185654,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr3:133185639..133185654, +
1.1e-59FFCP PHASE1:Hg19::chr9:96030923..96030932,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr9:96030923..96030932, -
1.1e-59FFCP PHASE1:Hg19::chr16:11301790..11301804,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p1@AK127887
1.1e-59FFCP PHASE2:Hg19::chr9:96030936..96030946,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr9:96030936..96030946, -
1.1e-59FFCP PHASE1:Hg19::chr6:150938045..150938069,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr6:150938045..150938069, +
1.1e-59FFCP PHASE2:Hg19::chr3:187694197..187694208,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p3@ENST00000446091, p3@uc003frr.1
1.1e-59FFCP PHASE1:Hg19::chr6:149188785..149188792,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr6:149188785..149188792, +
1.1e-59FFCP PHASE1:Hg19::chr16:17076780..17076785,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr16:17076780..17076785, +
1.1e-59FFCP PHASE1:Hg19::chr21:36430055..36430067,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr21:36430055..36430067, +
1.1e-59FFCP PHASE2:Hg19::chr15:52043573..52043583,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p16@LYSMD2
1.1e-59FFCP PHASE2:Hg19::chr20:46040936..46040941,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p5@ENST00000437920
1.1e-59FFCP PHASE2:Hg19::chr12:2296630..2296642,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p@chr12:2296630..2296642, +
1.1e-59FFCP PHASE1:Hg19::chr12:25157568..25157581,+#_05e2437bc8ee87d3cd1b8c77dfd3cbb7+, p@chr12:25157568..25157581
1.1e-59FFCP PHASE1:Hg19::chr1:6614821..6614842,-#_05e2437bc8ee87d3cd1b8c77dfd3cbb7p3@NOL9
1.24e-59FFCP PHASE2:Hg19::chr12:113496125..113496146,+#_62ab79716a3681af2e9b4cc1111d7a77p1@AB384763
1.24e-59FFCP PHASE1:Hg19::chr12:113496125..113496146,+#_62ab79716a3681af2e9b4cc1111d7a77p1@AB384763
1.16e-54FFCP PHASE2:Hg19::chr20:61640680..61640707,+#_5d0c05fa1a5990ebc7261d6f68b33e7dp3@LOC63930
1.16e-54FFCP PHASE1:Hg19::chr20:61640680..61640707,+#_5d0c05fa1a5990ebc7261d6f68b33e7dp3@LOC63930
1.84e-54FFCP PHASE2:Hg19::chr12:8765396..8765408,-#_83e025f2fb805d658936dd2b72c1b581p2@AICDA
1.84e-54FFCP PHASE1:Hg19::chr12:8765396..8765408,-#_83e025f2fb805d658936dd2b72c1b581p2@AICDA
4.61e-53FFCP PHASE1:Hg19::chr12:8765428..8765439,-#_624cc05852b5ff9f6731ba73a7c6a6e8p3@AICDA
4.61e-53FFCP PHASE2:Hg19::chr21:43283523..43283544,-#_624cc05852b5ff9f6731ba73a7c6a6e8p3@PRDM15
4.61e-53FFCP PHASE2:Hg19::chr12:8765428..8765439,-#_624cc05852b5ff9f6731ba73a7c6a6e8p3@AICDA
4.61e-53FFCP PHASE1:Hg19::chr21:43283523..43283544,-#_624cc05852b5ff9f6731ba73a7c6a6e8p3@PRDM15
5.27e-53FFCP PHASE2:Hg19::chr12:122462311..122462330,-#_270628e63a43b471b320298c62f419cep@chr12:122462311..122462330, -
5.27e-53FFCP PHASE1:Hg19::chr12:122462311..122462330,-#_270628e63a43b471b320298c62f419cep@chr12:122462311..122462330, -
6.89e-53FFCP PHASE2:Hg19::chr12:113495162..113495172,+#_3625a926f8d598e0c840834679c1fed1p11@DTX1
6.89e-53FFCP PHASE1:Hg19::chr12:113495162..113495172,+#_3625a926f8d598e0c840834679c1fed1p11@DTX1
1.77e-50FFCP PHASE1:Hg19::chr11:111224162..111224190,-#_69e5b058914399846da5adebd50d6aecp@chr11:111224162..111224190, -
1.77e-50FFCP PHASE2:Hg19::chr11:111224162..111224190,-#_69e5b058914399846da5adebd50d6aecp@chr11:111224162..111224190, -
1.57e-45FFCP PHASE2:Hg19::chr16:12640952..12640965,-#_05fd3420b9ba10622250c480c68fbc33p@chr16:12640952..12640965, -
1.57e-45FFCP PHASE1:Hg19::chr16:12640952..12640965,-#_05fd3420b9ba10622250c480c68fbc33p@chr16:12640952..12640965, -
1.88e-45FFCP PHASE2:Hg19::chr4:8230897..8230923,+#_1e8a4cb23062733bb1d97a39c063b2c1p7@SH3TC1
1.88e-45FFCP PHASE1:Hg19::chr4:8230897..8230923,+#_1e8a4cb23062733bb1d97a39c063b2c1p7@SH3TC1
2.22e-45FFCP PHASE1:Hg19::chr17:9962959..9962966,-#_8e0d2112c1e5a67aed0cbc56f802bcafp@chr17:9962959..9962966, -
2.22e-45FFCP PHASE1:Hg19::chr12:111115637..111115643,-#_8e0d2112c1e5a67aed0cbc56f802bcafp@chr12:111115637..111115643, -
2.22e-45FFCP PHASE2:Hg19::chr12:111115637..111115643,-#_8e0d2112c1e5a67aed0cbc56f802bcafp@chr12:111115637..111115643, -
2.22e-45FFCP PHASE2:Hg19::chr17:9962959..9962966,-#_8e0d2112c1e5a67aed0cbc56f802bcafp@chr17:9962959..9962966, -