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DOID:1115

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Name:sarcoma
Namespace:FANTOM
Definition:"A cell type cancer that has_material_basis_in abnormally proliferating cells derived_from embryonic mesoderm." [url:http://en.wikipedia.org/wiki/Sarcoma]
Xrefs:
links:

ICD9CM:171
ICD9CM:171.9
SNOMEDCT_2010_1_31:187985009
SNOMEDCT_2010_1_31:93765001

UMLS_CUI:C0153519
Synonyms: "connective and soft tissue neoplasm" EXACT []
"tumor of soft tissue and skeleton" EXACT [NCI2004_11_17:C3810]
Alt_id: DOID:3936

Ontology association

Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.



link to ontology dataset


data

Parents

is_a:DOID:0050687(cell type cancer)



Children


is a:DOID:4235 (spindle cell sarcoma)


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens) Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term
TOP 100 FANTOM5 Cage Peaks enriched with DOID:1115 (sarcoma), sorted by p-values
Analyst: Hideya Kawaji



link to source dataset
human : data

mouse : data

P-valueFFCPShort description
4.23e-25FFCP PHASE2:Hg19::chr7:155276800..155276807,+#_7f0062634174b963046c0a9ddc5c47e7p@chr7:155276800..155276807, +
4.23e-25FFCP PHASE1:Hg19::chr7:155276800..155276807,+#_7f0062634174b963046c0a9ddc5c47e7p@chr7:155276800..155276807, +
4.7e-23FFCP PHASE1:Hg19::chr4:147559302..147559313,+#_9a8973dc710f8b73393bc24bffb00012p@chr4:147559302..147559313, +
4.7e-23FFCP PHASE2:Hg19::chr4:147559302..147559313,+#_9a8973dc710f8b73393bc24bffb00012p@chr4:147559302..147559313, +
5.71e-21FFCP PHASE2:Hg19::chr10:54780374..54780384,+#_323589c7ee45bbf87e069d47572bc4fap@chr10:54780374..54780384, +
5.71e-21FFCP PHASE2:Hg19::chr6:113168012..113168027,-#_323589c7ee45bbf87e069d47572bc4fap@chr6:113168012..113168027, -
5.71e-21FFCP PHASE1:Hg19::chr8:114449616..114449629,-#_323589c7ee45bbf87e069d47572bc4fap3@CSMD3
5.71e-21FFCP PHASE1:Hg19::chr10:135140510..135140524,-#_323589c7ee45bbf87e069d47572bc4fap@chr10:135140510..135140524, -
5.71e-21FFCP PHASE2:Hg19::chr15:68124311..68124318,+#_323589c7ee45bbf87e069d47572bc4fap@chr15:68124311..68124318, +
5.71e-21FFCP PHASE2:Hg19::chr12:70351867..70351878,+#_323589c7ee45bbf87e069d47572bc4fap@chr12:70351867..70351878, +
5.71e-21FFCP PHASE2:Hg19::chr8:114449612..114449615,-#_323589c7ee45bbf87e069d47572bc4fap10@CSMD3
5.71e-21FFCP PHASE1:Hg19::chr2:156009264..156009270,-#_323589c7ee45bbf87e069d47572bc4fap@chr2:156009264..156009270, -
5.71e-21FFCP PHASE1:Hg19::chr15:68124311..68124318,+#_323589c7ee45bbf87e069d47572bc4fap@chr15:68124311..68124318, +
5.71e-21FFCP PHASE2:Hg19::chr2:156009264..156009270,-#_323589c7ee45bbf87e069d47572bc4fap@chr2:156009264..156009270, -
5.71e-21FFCP PHASE2:Hg19::chr8:114449616..114449629,-#_323589c7ee45bbf87e069d47572bc4fap3@CSMD3
5.71e-21FFCP PHASE2:Hg19::chr1:172145683..172145699,+#_323589c7ee45bbf87e069d47572bc4fap@chr1:172145683..172145699, +
5.71e-21FFCP PHASE1:Hg19::chr6:113168012..113168027,-#_323589c7ee45bbf87e069d47572bc4fap@chr6:113168012..113168027, -
5.71e-21FFCP PHASE1:Hg19::chr12:69678255..69678259,+#_323589c7ee45bbf87e069d47572bc4fap1@ENST00000548895
5.71e-21FFCP PHASE1:Hg19::chr10:54780374..54780384,+#_323589c7ee45bbf87e069d47572bc4fa+, p@chr10:54780374..54780384
5.71e-21FFCP PHASE1:Hg19::chr12:70351867..70351878,+#_323589c7ee45bbf87e069d47572bc4fap@chr12:70351867..70351878, +
5.71e-21FFCP PHASE2:Hg19::chr10:135140510..135140524,-#_323589c7ee45bbf87e069d47572bc4fap@chr10:135140510..135140524, -
5.71e-21FFCP PHASE2:Hg19::chr12:69678255..69678259,+#_323589c7ee45bbf87e069d47572bc4fap1@ENST00000548895
5.71e-21FFCP PHASE1:Hg19::chr1:172145683..172145699,+#_323589c7ee45bbf87e069d47572bc4fap@chr1:172145683..172145699, +
5.71e-21FFCP PHASE1:Hg19::chr8:114449612..114449615,-#_323589c7ee45bbf87e069d47572bc4fap10@CSMD3
6.86e-21FFCP PHASE1:Hg19::chr8:40200877..40200902,-#_297d2011428f7b53c4d44b73ae4263c6p1@ENST00000521030
6.86e-21FFCP PHASE2:Hg19::chr8:40200877..40200902,-#_297d2011428f7b53c4d44b73ae4263c6p1@ENST00000521030
1.34e-18FFCP PHASE2:Hg19::chr11:104125418..104125428,+#_6b84452a5614ff00e46c6c235c11f5d3p@chr11:104125418..104125428, +
1.34e-18FFCP PHASE1:Hg19::chr11:104125418..104125428,+#_6b84452a5614ff00e46c6c235c11f5d3p@chr11:104125418..104125428, +
6.33e-18FFCP PHASE2:Hg19::chr8:40200903..40200914,-#_1a0ab0fb46f1ead121d580af0fafadd7p2@ENST00000522486
6.33e-18FFCP PHASE1:Hg19::chr8:40200903..40200914,-#_1a0ab0fb46f1ead121d580af0fafadd7p2@ENST00000522486
8.11e-18FFCP PHASE2:Hg19::chr8:40200933..40200967,-#_429076b7cefe43f2bf97bf3b3c659837p1@ENST00000522486
8.11e-18FFCP PHASE1:Hg19::chr8:40200933..40200967,-#_429076b7cefe43f2bf97bf3b3c659837p1@ENST00000522486
3.14e-16FFCP PHASE1:Hg19::chr18:41513341..41513354,-#_5bd60cfcab447aea03320a222c2db284p@chr18:41513341..41513354, -
3.14e-16FFCP PHASE2:Hg19::chr18:41513341..41513354,-#_5bd60cfcab447aea03320a222c2db284p@chr18:41513341..41513354, -
6.02e-16FFCP PHASE1:Hg19::chr22:22901442..22901461,-#_c64e7cbf0ff8256c3e13ca473d7b7b5ap5@PRAME
6.02e-16FFCP PHASE2:Hg19::chr22:22901442..22901461,-#_c64e7cbf0ff8256c3e13ca473d7b7b5ap5@PRAME
1.23e-15FFCP PHASE2:Hg19::chr8:114449595..114449607,-#_6fc91ae22e69ca99a1822417d940dc30p6@CSMD3
1.23e-15FFCP PHASE1:Hg19::chr7:84644430..84644441,-#_6fc91ae22e69ca99a1822417d940dc30-, p@chr7:84644430..84644441
1.23e-15FFCP PHASE2:Hg19::chr7:84644430..84644441,-#_6fc91ae22e69ca99a1822417d940dc30p@chr7:84644430..84644441, -
1.23e-15FFCP PHASE1:Hg19::chr8:114449595..114449607,-#_6fc91ae22e69ca99a1822417d940dc30p6@CSMD3
1.29e-15FFCP PHASE1:Hg19::chr11:104125387..104125399,+#_ff7582cc8868b97bacff939b2ea6990bp@chr11:104125387..104125399, +
1.29e-15FFCP PHASE1:Hg19::chr11:104125404..104125415,+#_ff7582cc8868b97bacff939b2ea6990b+, p@chr11:104125404..104125415
1.29e-15FFCP PHASE2:Hg19::chr11:104125387..104125399,+#_ff7582cc8868b97bacff939b2ea6990bp@chr11:104125387..104125399, +
1.29e-15FFCP PHASE2:Hg19::chr11:104125404..104125415,+#_ff7582cc8868b97bacff939b2ea6990bp@chr11:104125404..104125415, +
1.66e-15FFCP PHASE1:Hg19::chr2:131058236..131058275,-#_2ef0932282d6274ce2713142badfd296p@chr2:131058236..131058275, -
1.66e-15FFCP PHASE2:Hg19::chr2:131058236..131058275,-#_2ef0932282d6274ce2713142badfd296p@chr2:131058236..131058275, -
2.41e-14FFCP PHASE2:Hg19::chr1:190678255..190678261,-#_153b576b74d0d4a5813a44c4cd9622aa-, p@chr1:190678255..190678261
2.41e-14FFCP PHASE1:Hg19::chr10:29115553..29115564,-#_153b576b74d0d4a5813a44c4cd9622aap@chr10:29115553..29115564, -
2.41e-14FFCP PHASE2:Hg19::chr10:29115473..29115484,-#_153b576b74d0d4a5813a44c4cd9622aap@chr10:29115473..29115484, -
2.41e-14FFCP PHASE1:Hg19::chr1:190678255..190678261,-#_153b576b74d0d4a5813a44c4cd9622aap@chr1:190678255..190678261, -
2.41e-14FFCP PHASE2:Hg19::chr1:172134783..172134793,+#_153b576b74d0d4a5813a44c4cd9622aap@chr1:172134783..172134793, +
2.41e-14FFCP PHASE1:Hg19::chr4:134455464..134455466,-#_153b576b74d0d4a5813a44c4cd9622aap@chr4:134455464..134455466, -
2.41e-14FFCP PHASE2:Hg19::chr10:29115553..29115564,-#_153b576b74d0d4a5813a44c4cd9622aap@chr10:29115553..29115564, -
2.41e-14FFCP PHASE2:Hg19::chr15:68124344..68124357,+#_153b576b74d0d4a5813a44c4cd9622aap@chr15:68124344..68124357, +
2.41e-14FFCP PHASE2:Hg19::chr4:134455464..134455466,-#_153b576b74d0d4a5813a44c4cd9622aap@chr4:134455464..134455466, -
2.41e-14FFCP PHASE1:Hg19::chr1:172134783..172134793,+#_153b576b74d0d4a5813a44c4cd9622aap@chr1:172134783..172134793, +
2.41e-14FFCP PHASE1:Hg19::chr15:68124344..68124357,+#_153b576b74d0d4a5813a44c4cd9622aap@chr15:68124344..68124357, +
2.41e-14FFCP PHASE2:Hg19::chr15:68124362..68124376,+#_153b576b74d0d4a5813a44c4cd9622aap@chr15:68124362..68124376, +
2.41e-14FFCP PHASE1:Hg19::chr10:29115473..29115484,-#_153b576b74d0d4a5813a44c4cd9622aap@chr10:29115473..29115484, -
2.41e-14FFCP PHASE1:Hg19::chr15:68124362..68124376,+#_153b576b74d0d4a5813a44c4cd9622aap@chr15:68124362..68124376, +
2.58e-14FFCP PHASE2:Hg19::chr18:22254259..22254267,+#_08350276db57b627469af61a9773aea2p@chr18:22254259..22254267, +
2.58e-14FFCP PHASE1:Hg19::chr1:172147726..172147731,+#_08350276db57b627469af61a9773aea2p@chr1:172147726..172147731, +
2.58e-14FFCP PHASE1:Hg19::chr22:49819110..49819121,-#_08350276db57b627469af61a9773aea2p5@C22orf34
2.58e-14FFCP PHASE2:Hg19::chr22:49819110..49819121,-#_08350276db57b627469af61a9773aea2p5@C22orf34
2.58e-14FFCP PHASE1:Hg19::chr12:68696657..68696661,-#_08350276db57b627469af61a9773aea2p4@MDM1
2.58e-14FFCP PHASE2:Hg19::chr1:172147726..172147731,+#_08350276db57b627469af61a9773aea2p@chr1:172147726..172147731, +
2.58e-14FFCP PHASE2:Hg19::chr12:68696657..68696661,-#_08350276db57b627469af61a9773aea2p4@MDM1
2.58e-14FFCP PHASE1:Hg19::chr18:22254259..22254267,+#_08350276db57b627469af61a9773aea2p@chr18:22254259..22254267, +
2.76e-14FFCP PHASE2:Hg19::chr14:32963254..32963261,+#_dbe4b87ac1be6c3ddece0f36215695bap19@AKAP6
2.76e-14FFCP PHASE1:Hg19::chr14:32963254..32963261,+#_dbe4b87ac1be6c3ddece0f36215695bap19@AKAP6
2.76e-14FFCP PHASE2:Hg19::chr19:48876418..48876427,+#_dbe4b87ac1be6c3ddece0f36215695bap@chr19:48876418..48876427, +
2.76e-14FFCP PHASE1:Hg19::chr18:22253484..22253496,+#_dbe4b87ac1be6c3ddece0f36215695bap@chr18:22253484..22253496, +
2.76e-14FFCP PHASE1:Hg19::chr19:48876418..48876427,+#_dbe4b87ac1be6c3ddece0f36215695bap@chr19:48876418..48876427, +
2.76e-14FFCP PHASE2:Hg19::chr7:15639445..15639451,-#_dbe4b87ac1be6c3ddece0f36215695bap@chr7:15639445..15639451, -
2.76e-14FFCP PHASE1:Hg19::chr18:44814866..44814869,+#_dbe4b87ac1be6c3ddece0f36215695bap@chr18:44814866..44814869, +
2.76e-14FFCP PHASE2:Hg19::chr18:22253484..22253496,+#_dbe4b87ac1be6c3ddece0f36215695bap@chr18:22253484..22253496, +
2.76e-14FFCP PHASE2:Hg19::chr15:68114974..68114985,+#_dbe4b87ac1be6c3ddece0f36215695bap@chr15:68114974..68114985, +
2.76e-14FFCP PHASE2:Hg19::chr1:188791330..188791337,-#_dbe4b87ac1be6c3ddece0f36215695bap@chr1:188791330..188791337, -
2.76e-14FFCP PHASE2:Hg19::chr18:44814866..44814869,+#_dbe4b87ac1be6c3ddece0f36215695bap@chr18:44814866..44814869, +
2.76e-14FFCP PHASE1:Hg19::chr7:15639445..15639451,-#_dbe4b87ac1be6c3ddece0f36215695bap@chr7:15639445..15639451, -
2.76e-14FFCP PHASE1:Hg19::chr15:68114974..68114985,+#_dbe4b87ac1be6c3ddece0f36215695bap@chr15:68114974..68114985, +
2.76e-14FFCP PHASE1:Hg19::chr1:188791330..188791337,-#_dbe4b87ac1be6c3ddece0f36215695bap@chr1:188791330..188791337, -
7.64e-14FFCP PHASE1:Hg19::chr13:64652914..64652935,+#_1df11749aa60773ba1241177fe6deadfp@chr13:64652914..64652935, +
7.64e-14FFCP PHASE2:Hg19::chr21:19858196..19858204,-#_1df11749aa60773ba1241177fe6deadfp2@TMPRSS15
7.64e-14FFCP PHASE1:Hg19::chr21:19858196..19858204,-#_1df11749aa60773ba1241177fe6deadfp2@TMPRSS15
7.64e-14FFCP PHASE2:Hg19::chr13:64652914..64652935,+#_1df11749aa60773ba1241177fe6deadfp@chr13:64652914..64652935, +
1.66e-13FFCP PHASE1:Hg19::chr1:197886665..197886732,+#_d75a307280e4b064dc58230cfde72816p3@LHX9
1.66e-13FFCP PHASE2:Hg19::chr1:197886665..197886732,+#_d75a307280e4b064dc58230cfde72816p3@LHX9
1.69e-13FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_661b75457e8e92745a20dd6d8e2e7804p10@ITGA8
1.69e-13FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_661b75457e8e92745a20dd6d8e2e7804p10@ITGA8
1.84e-13FFCP PHASE2:Hg19::chr1:10434688..10434703,+#_a5459df4bbee19c92b6bba65fad30393p@chr1:10434688..10434703, +
1.84e-13FFCP PHASE1:Hg19::chr1:10434688..10434703,+#_a5459df4bbee19c92b6bba65fad30393p@chr1:10434688..10434703, +
1.92e-13FFCP PHASE1:Hg19::chr7:84139434..84139439,+#_75b46acb1807d99c51e7956a06272c3cp@chr7:84139434..84139439, +
1.92e-13FFCP PHASE2:Hg19::chr7:84139434..84139439,+#_75b46acb1807d99c51e7956a06272c3cp@chr7:84139434..84139439, +
1.92e-13FFCP PHASE1:Hg19::chr5:135378786..135378804,+#_75b46acb1807d99c51e7956a06272c3cp@chr5:135378786..135378804, +
1.92e-13FFCP PHASE2:Hg19::chr5:135378786..135378804,+#_75b46acb1807d99c51e7956a06272c3cp@chr5:135378786..135378804, +
1.36e-12FFCP PHASE1:Hg19::chr15:68115921..68115938,+#_9ec92dfa046adb1a7322af1ddeddaaf0p2@SKOR1
1.36e-12FFCP PHASE2:Hg19::chr15:68115921..68115938,+#_9ec92dfa046adb1a7322af1ddeddaaf0p2@SKOR1
1.49e-12FFCP PHASE1:Hg19::chrX:151307006..151307013,-#_ec5f991793093567917d789df67a8ef9p2@MAGEA10
1.49e-12FFCP PHASE2:Hg19::chrX:151307006..151307013,-#_ec5f991793093567917d789df67a8ef9p2@MAGEA10