Personal tools

DOID:127

From FANTOM5_SSTAR

Jump to: navigation, search

Name:leiomyoma
Namespace:FANTOM
Definition:"A cell type benign neoplasm that is a benign tumor of smooth muscle cells." [url:http://en.wikipedia.org/wiki/Cancer, url:http://en.wikipedia.org/wiki/Leiomyoma]
Xrefs:
links:

MSH:D007889
NCI:C3157
SNOMEDCT_2010_1_31:189787000
SNOMEDCT_2010_1_31:189788005
SNOMEDCT_2010_1_31:189793008

UMLS_CUI:C0023267
Synonyms: "leiomyoma" EXACT [CSP2005:2011-3663]
"leiomyoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189788005]
"leiomyomatous neoplasm (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189787000]
"leiomyomatous neoplasm NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189793008]
"leiomyomatous tumor" EXACT [NCI2004_11_17:C3157]

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:0060084(cell type benign neoplasm)



Children
NA


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:127 (leiomyoma), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.41e-147FFCP PHASE2:Hg19::chr3:132975986..132975997,-#_d00878cb70a4a23c5131b6943b0765cfp1@uc003epl.2
5.41e-147FFCP PHASE1:Hg19::chr3:132975986..132975997,-#_d00878cb70a4a23c5131b6943b0765cfp1@uc003epl.2
8.98e-131FFCP PHASE2:Hg19::chr1:152842532..152842539,+#_d5f96552b89497180c25b346ebe93d92p@chr1:152842532..152842539, +
8.98e-131FFCP PHASE2:Hg19::chr1:152842546..152842554,+#_d5f96552b89497180c25b346ebe93d92p@chr1:152842546..152842554, +
8.98e-131FFCP PHASE1:Hg19::chr1:152842532..152842539,+#_d5f96552b89497180c25b346ebe93d92p@chr1:152842532..152842539, +
8.98e-131FFCP PHASE1:Hg19::chr1:152842546..152842554,+#_d5f96552b89497180c25b346ebe93d92p@chr1:152842546..152842554, +
2.33e-118FFCP PHASE1:Hg19::chr3:132976005..132976010,-#_9bf40fa349115f656b4bdc9ccc25d30ep2@ENST00000505721
2.33e-118FFCP PHASE2:Hg19::chr3:132976005..132976010,-#_9bf40fa349115f656b4bdc9ccc25d30ep2@ENST00000505721
3.48e-118FFCP PHASE1:Hg19::chr2:218192886..218192899,-#_ff735fb53a1d19feda3fd22181f355f4p@chr2:218192886..218192899, -
3.48e-118FFCP PHASE2:Hg19::chr2:218192886..218192899,-#_ff735fb53a1d19feda3fd22181f355f4p@chr2:218192886..218192899, -
5.41e-85FFCP PHASE2:Hg19::chr8:42037558..42037573,-#_7ecf57fa3698bf45966474d02c9482c9-, p@chr8:42037558..42037573
5.41e-85FFCP PHASE1:Hg19::chr8:42037558..42037573,-#_7ecf57fa3698bf45966474d02c9482c9p@chr8:42037558..42037573, -
1.28e-84FFCP PHASE2:Hg19::chr3:141150971..141150978,+#_487f031c75e9a7a312f7aeb33567e9cbp60@ZBTB38
1.28e-84FFCP PHASE1:Hg19::chr3:141150971..141150978,+#_487f031c75e9a7a312f7aeb33567e9cbp60@ZBTB38
2.39e-66FFCP PHASE1:Hg19::chr2:218192853..218192858,-#_ff3c2beaf55be562cd3e69b4377237b8p@chr2:218192853..218192858, -
2.39e-66FFCP PHASE2:Hg19::chr2:218192853..218192858,-#_ff3c2beaf55be562cd3e69b4377237b8p@chr2:218192853..218192858, -
4.68e-66FFCP PHASE1:Hg19::chr1:163045452..163045464,+#_1c13ad77663790a3a38253e55ad2be97p@chr1:163045452..163045464, +
4.68e-66FFCP PHASE2:Hg19::chr1:163045452..163045464,+#_1c13ad77663790a3a38253e55ad2be97+, p@chr1:163045452..163045464
2.43e-60FFCP PHASE1:Hg19::chr22:44708774..44708788,-#_295250bf53da3c337d817eb4c64b03aap3@KIAA1644
2.43e-60FFCP PHASE2:Hg19::chr22:44708774..44708788,-#_295250bf53da3c337d817eb4c64b03aap3@KIAA1644
4.17e-55FFCP PHASE2:Hg19::chr2:207406777..207406786,+#_d94b1a7d87d91e712323cd3c5f525124p9@ADAM23
4.17e-55FFCP PHASE1:Hg19::chr2:207406777..207406786,+#_d94b1a7d87d91e712323cd3c5f525124p9@ADAM23
1.41e-46FFCP PHASE1:Hg19::chr8:42040287..42040298,-#_b29eebabd6265515ddbaaea13ffbe358p10@PLAT
1.41e-46FFCP PHASE2:Hg19::chr8:42040287..42040298,-#_b29eebabd6265515ddbaaea13ffbe358p10@PLAT
9.77e-45FFCP PHASE2:Hg19::chr2:218193183..218193196,-#_58dc3c67aa521508cb1dff4c402b1893p@chr2:218193183..218193196, -
9.77e-45FFCP PHASE2:Hg19::chr7:12134329..12134354,-#_58dc3c67aa521508cb1dff4c402b1893p@chr7:12134329..12134354, -
9.77e-45FFCP PHASE1:Hg19::chr2:218193183..218193196,-#_58dc3c67aa521508cb1dff4c402b1893p@chr2:218193183..218193196, -
9.77e-45FFCP PHASE1:Hg19::chr7:12134329..12134354,-#_58dc3c67aa521508cb1dff4c402b1893p@chr7:12134329..12134354, -
6.94e-44FFCP PHASE2:Hg19::chr6:86200265..86200276,+#_bb26a66b8ecc3d78bd3c2741d64ea1aep@chr6:86200265..86200276, +
6.94e-44FFCP PHASE1:Hg19::chr6:86200265..86200276,+#_bb26a66b8ecc3d78bd3c2741d64ea1aep@chr6:86200265..86200276, +
1.23e-38FFCP PHASE1:Hg19::chrX:7077952..7077959,+#_de6772f1b9d061dba0d0c7245fa3a42cp18@STS
1.23e-38FFCP PHASE2:Hg19::chrX:7077952..7077959,+#_de6772f1b9d061dba0d0c7245fa3a42cp18@STS
1.85e-36FFCP PHASE1:Hg19::chr6:86204236..86204247,+#_0180ed1196b8db329fe57bea66c6751bp@chr6:86204236..86204247, +
1.85e-36FFCP PHASE2:Hg19::chr6:86204236..86204247,+#_0180ed1196b8db329fe57bea66c6751bp@chr6:86204236..86204247, +
2.98e-36FFCP PHASE1:Hg19::chr1:198203826..198203841,+#_72c8e672946ac84378062c62fe9c5680p@chr1:198203826..198203841, +
2.98e-36FFCP PHASE2:Hg19::chr1:198203826..198203841,+#_72c8e672946ac84378062c62fe9c5680p@chr1:198203826..198203841, +
4.66e-34FFCP PHASE1:Hg19::chr13:32313685..32313699,+#_5e55b149897cea224b09ae42961de925p2@RXFP2
4.66e-34FFCP PHASE2:Hg19::chr13:32313685..32313699,+#_5e55b149897cea224b09ae42961de925p2@RXFP2
5.96e-34FFCP PHASE1:Hg19::chr11:102712977..102712984,-#_e8387d86bceb276d6eca9b9e93b9f7f4p@chr11:102712977..102712984, -
5.96e-34FFCP PHASE2:Hg19::chr6:130763941..130763951,+#_e8387d86bceb276d6eca9b9e93b9f7f4p@chr6:130763941..130763951, +
5.96e-34FFCP PHASE1:Hg19::chr1:46379338..46379343,+#_e8387d86bceb276d6eca9b9e93b9f7f4p13@MAST2
5.96e-34FFCP PHASE1:Hg19::chr7:12134356..12134370,-#_e8387d86bceb276d6eca9b9e93b9f7f4-, p@chr7:12134356..12134370
5.96e-34FFCP PHASE2:Hg19::chr4:187518318..187518321,-#_e8387d86bceb276d6eca9b9e93b9f7f4p53@FAT1
5.96e-34FFCP PHASE2:Hg19::chr1:46379338..46379343,+#_e8387d86bceb276d6eca9b9e93b9f7f4p13@MAST2
5.96e-34FFCP PHASE1:Hg19::chr3:132975822..132975848,-#_e8387d86bceb276d6eca9b9e93b9f7f4p@chr3:132975822..132975848, -
5.96e-34FFCP PHASE1:Hg19::chr6:130763941..130763951,+#_e8387d86bceb276d6eca9b9e93b9f7f4p@chr6:130763941..130763951, +
5.96e-34FFCP PHASE2:Hg19::chr11:102712977..102712984,-#_e8387d86bceb276d6eca9b9e93b9f7f4p@chr11:102712977..102712984, -
5.96e-34FFCP PHASE2:Hg19::chr3:132975822..132975848,-#_e8387d86bceb276d6eca9b9e93b9f7f4p@chr3:132975822..132975848, -
5.96e-34FFCP PHASE1:Hg19::chr3:132975886..132975894,-#_e8387d86bceb276d6eca9b9e93b9f7f4p1@ENST00000504993
5.96e-34FFCP PHASE2:Hg19::chr3:132975886..132975894,-#_e8387d86bceb276d6eca9b9e93b9f7f4p1@ENST00000504993
5.96e-34FFCP PHASE2:Hg19::chr7:12134356..12134370,-#_e8387d86bceb276d6eca9b9e93b9f7f4p@chr7:12134356..12134370, -
5.96e-34FFCP PHASE1:Hg19::chr4:187518318..187518321,-#_e8387d86bceb276d6eca9b9e93b9f7f4p53@FAT1
9.1e-34FFCP PHASE2:Hg19::chr13:32313658..32313668,+#_8f487ae0828d2248f4966c3b68e5147cp3@RXFP2
9.1e-34FFCP PHASE1:Hg19::chr13:32313658..32313668,+#_8f487ae0828d2248f4966c3b68e5147cp3@RXFP2
8.26e-33FFCP PHASE2:Hg19::chr21:30000326..30000330,+#_9d7b7c6454c09eb44c747bbfbb3ede6fp@chr21:30000326..30000330, +
8.26e-33FFCP PHASE1:Hg19::chr21:30000326..30000330,+#_9d7b7c6454c09eb44c747bbfbb3ede6fp@chr21:30000326..30000330, +
2.41e-32FFCP PHASE1:Hg19::chr6:130761678..130761702,+#_0f8a8b9f093a7f57ad964df0cef34d47p1@AB385516
2.41e-32FFCP PHASE2:Hg19::chr6:130761678..130761702,+#_0f8a8b9f093a7f57ad964df0cef34d47p1@AB385516
1.3e-31FFCP PHASE2:Hg19::chr8:42042654..42042665,-#_0d84b6cb6d4274cec3599224c863d90fp9@PLAT
1.3e-31FFCP PHASE1:Hg19::chr8:42042654..42042665,-#_0d84b6cb6d4274cec3599224c863d90fp9@PLAT
7.37e-31FFCP PHASE1:Hg19::chr2:220326139..220326158,+#_2b7426639d9e6fd5a7d4011f399ec981p10@SPEG
7.37e-31FFCP PHASE2:Hg19::chr2:220326139..220326158,+#_2b7426639d9e6fd5a7d4011f399ec981p10@SPEG
1.0e-30FFCP PHASE1:Hg19::chr7:27219651..27219660,-#_1a1a919887906d488d0224ad569c528cp4@ENST00000470747
1.0e-30FFCP PHASE2:Hg19::chr7:27219651..27219660,-#_1a1a919887906d488d0224ad569c528cp4@ENST00000470747
1.71e-30FFCP PHASE1:Hg19::chr8:42033253..42033264,-#_a1b176c2183f5eec272f4e88a822885ep@chr8:42033253..42033264, -
1.71e-30FFCP PHASE2:Hg19::chr8:42033253..42033264,-#_a1b176c2183f5eec272f4e88a822885ep@chr8:42033253..42033264, -
1.98e-30FFCP PHASE2:Hg19::chr3:141151044..141151053,+#_13e146b5e23075dc2706f908b50c64b7p51@ZBTB38
1.98e-30FFCP PHASE1:Hg19::chr3:141151044..141151053,+#_13e146b5e23075dc2706f908b50c64b7p51@ZBTB38
3.59e-30FFCP PHASE1:Hg19::chr10:90974443..90974454,-#_158552840c619129259e1517cb118a1fp@chr10:90974443..90974454, -
3.59e-30FFCP PHASE2:Hg19::chr10:90974443..90974454,-#_158552840c619129259e1517cb118a1fp@chr10:90974443..90974454, -
8.26e-30FFCP PHASE2:Hg19::chr7:84349931..84349955,-#_84f1f98ac5843e6287279d3f616ef071p@chr7:84349931..84349955, -
8.26e-30FFCP PHASE1:Hg19::chr7:84349931..84349955,-#_84f1f98ac5843e6287279d3f616ef071p@chr7:84349931..84349955, -
1.8e-29FFCP PHASE1:Hg19::chr9:106854088..106854104,-#_b965d825d6ebc60744fe4cdcfd654589p@chr9:106854088..106854104, -
1.8e-29FFCP PHASE2:Hg19::chr9:106854088..106854104,-#_b965d825d6ebc60744fe4cdcfd654589p@chr9:106854088..106854104, -
6.14e-29FFCP PHASE2:Hg19::chr3:98518094..98518105,-#_c265bef2adda44f001946aa79832a573p39@DCBLD2
6.14e-29FFCP PHASE1:Hg19::chr3:98518094..98518105,-#_c265bef2adda44f001946aa79832a573p39@DCBLD2
6.28e-29FFCP PHASE1:Hg19::chr10:90988088..90988122,-#_b67e4e39a465c1282d8a2a78e200f8a8p@chr10:90988088..90988122, -
6.28e-29FFCP PHASE2:Hg19::chr10:90988088..90988122,-#_b67e4e39a465c1282d8a2a78e200f8a8p@chr10:90988088..90988122, -
6.84e-28FFCP PHASE1:Hg19::chr1:219615990..219616001,-#_a494aeff54e576f17ef0f977c280888bp1@ENST00000420762
6.84e-28FFCP PHASE2:Hg19::chr1:219615990..219616001,-#_a494aeff54e576f17ef0f977c280888bp1@ENST00000420762
8.12e-28FFCP PHASE2:Hg19::chr4:6279204..6279216,+#_a8bcc4843b3b6b3588be4dc750ce8a94p6@WFS1
8.12e-28FFCP PHASE1:Hg19::chr4:6279204..6279216,+#_a8bcc4843b3b6b3588be4dc750ce8a94p6@WFS1
9.35e-28FFCP PHASE1:Hg19::chr8:42045498..42045512,-#_f8b8e07cdc4a098de0db0e7596a58cfdp6@PLAT
9.35e-28FFCP PHASE2:Hg19::chr8:42045498..42045512,-#_f8b8e07cdc4a098de0db0e7596a58cfdp6@PLAT
1.06e-27FFCP PHASE1:Hg19::chr3:151871166..151871172,+#_8a70f18409f0a69a8e4de4efcab7d12cp@chr3:151871166..151871172, +
1.06e-27FFCP PHASE1:Hg19::chr6:17281802..17281817,+#_8a70f18409f0a69a8e4de4efcab7d12cp13@RBM24
1.06e-27FFCP PHASE2:Hg19::chr6:17281802..17281817,+#_8a70f18409f0a69a8e4de4efcab7d12cp13@RBM24
1.06e-27FFCP PHASE2:Hg19::chr3:151871166..151871172,+#_8a70f18409f0a69a8e4de4efcab7d12cp@chr3:151871166..151871172, +
1.82e-27FFCP PHASE1:Hg19::chr3:69811826..69811835,+#_d794d01d55ae88b6194aadc7e7056324p16@MITF
1.82e-27FFCP PHASE2:Hg19::chr3:69811826..69811835,+#_d794d01d55ae88b6194aadc7e7056324p16@MITF
2.72e-27FFCP PHASE1:Hg19::chr7:129962463..129962477,+#_b55a8e1aadd03cd1efe67312237d044b+, p@chr7:129962463..129962477
2.72e-27FFCP PHASE2:Hg19::chr7:129962463..129962477,+#_b55a8e1aadd03cd1efe67312237d044bp@chr7:129962463..129962477, +
2.98e-27FFCP PHASE1:Hg19::chr1:163042618..163042628,+#_452ee6838b990b7c594b832e489a9c59p@chr1:163042618..163042628, +
2.98e-27FFCP PHASE2:Hg19::chr1:163042618..163042628,+#_452ee6838b990b7c594b832e489a9c59p@chr1:163042618..163042628, +
3.26e-27FFCP PHASE2:Hg19::chr12:75875762..75875778,+#_8a8932fb87db48ce32aefda63bf48efdp@chr12:75875762..75875778, +
3.26e-27FFCP PHASE1:Hg19::chr12:75875762..75875778,+#_8a8932fb87db48ce32aefda63bf48efdp@chr12:75875762..75875778, +
4.65e-27FFCP PHASE2:Hg19::chr14:76447469..76447487,-#_37c48be25c82c030c87cc9417bbe555fp12@TGFB3
4.65e-27FFCP PHASE1:Hg19::chr14:76447469..76447487,-#_37c48be25c82c030c87cc9417bbe555fp12@TGFB3
5.31e-27FFCP PHASE1:Hg19::chr10:90975757..90975768,-#_b74356c295ce6d6cf5acb1e78b34e80ep@chr10:90975757..90975768, -
5.31e-27FFCP PHASE2:Hg19::chr10:90975757..90975768,-#_b74356c295ce6d6cf5acb1e78b34e80ep@chr10:90975757..90975768, -