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DOID:1909

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Name:melanoma
Namespace:FANTOM
Definition:"A cell type cancer that has_material_basis_in abnormally proliferating cells derived_from melanocytes which are found in skin, the bowel and the eye." [url:http://en.wikipedia.org/wiki/Melanoma]
Xrefs:
links:

MSH:D008545
NCI:C3224
SNOMEDCT_2010_1_31:154501005
SNOMEDCT_2010_1_31:189749008
SNOMEDCT_2010_1_31:2092003
SNOMEDCT_2010_1_31:269503007
SNOMEDCT_2010_1_31:269577007
SNOMEDCT_2010_1_31:372244006

UMLS_CUI:C0025202
Synonyms: "malignant melanoma" EXACT [NCI2004_11_17:C3224]
"malignant melanoma" EXACT [MTH:475]
"malignant melanoma" EXACT [SNOMEDCT_2005_07_31:269577007]
"malignant melanoma" EXACT [SNOMEDCT_2005_07_31:154501005]
"malignant melanoma (disorder)" EXACT [SNOMEDCT_2005_07_31:372244006]
"malignant melanoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:269503007]
"malignant melanoma, morphology (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:2092003]
"melanoma" EXACT [CSP2005:2020-2434]
"melanoma" EXACT [MTH:NOCODE]
"Naevocarcinoma" EXACT [SNOMEDCT_2005_07_31:189749008]

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:0050687(cell type cancer)



Children
NA


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1909 (melanoma), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
3.29e-195FFCP PHASE1:Hg19::chr2:85987891..85987897,+#_4991324b875f661973c7bba16db0bb96p22@ATOH8
3.29e-195FFCP PHASE1:Hg19::chr7:100806148..100806155,-#_4991324b875f661973c7bba16db0bb96p@chr7:100806148..100806155, -
3.29e-195FFCP PHASE1:Hg19::chr2:48274017..48274020,+#_4991324b875f661973c7bba16db0bb96p@chr2:48274017..48274020, +
3.29e-195FFCP PHASE2:Hg19::chr2:85987891..85987897,+#_4991324b875f661973c7bba16db0bb96p22@ATOH8
3.29e-195FFCP PHASE2:Hg19::chr7:100806148..100806155,-#_4991324b875f661973c7bba16db0bb96p@chr7:100806148..100806155, -
3.29e-195FFCP PHASE1:Hg19::chr7:100808620..100808648,-#_4991324b875f661973c7bba16db0bb96p4@VGF
3.29e-195FFCP PHASE2:Hg19::chr1:144866854..144866864,-#_4991324b875f661973c7bba16db0bb96p62@PDE4DIP
3.29e-195FFCP PHASE1:Hg19::chr1:144866854..144866864,-#_4991324b875f661973c7bba16db0bb96p62@PDE4DIP
3.29e-195FFCP PHASE2:Hg19::chr7:100808620..100808648,-#_4991324b875f661973c7bba16db0bb96p4@VGF
3.29e-195FFCP PHASE2:Hg19::chr1:144866866..144866877,-#_4991324b875f661973c7bba16db0bb96p61@PDE4DIP
3.29e-195FFCP PHASE1:Hg19::chr1:144866866..144866877,-#_4991324b875f661973c7bba16db0bb96p61@PDE4DIP
3.29e-195FFCP PHASE2:Hg19::chr2:48274017..48274020,+#_4991324b875f661973c7bba16db0bb96p@chr2:48274017..48274020, +
3.29e-195FFCP PHASE2:Hg19::chr6:165597276..165597281,-#_4991324b875f661973c7bba16db0bb96p@chr6:165597276..165597281, -
3.29e-195FFCP PHASE1:Hg19::chr2:85987839..85987846,+#_4991324b875f661973c7bba16db0bb96p20@ATOH8
3.29e-195FFCP PHASE1:Hg19::chr6:165597276..165597281,-#_4991324b875f661973c7bba16db0bb96p@chr6:165597276..165597281, -
3.29e-195FFCP PHASE2:Hg19::chr2:85987839..85987846,+#_4991324b875f661973c7bba16db0bb96p20@ATOH8
4.61e-131FFCP PHASE2:Hg19::chr7:100806481..100806491,-#_dba9d9bd8f30f1f235c1d6a3ef45a0f9p@chr7:100806481..100806491, -
4.61e-131FFCP PHASE1:Hg19::chr7:100807886..100807899,-#_dba9d9bd8f30f1f235c1d6a3ef45a0f9p@chr7:100807886..100807899, -
4.61e-131FFCP PHASE2:Hg19::chr7:100807886..100807899,-#_dba9d9bd8f30f1f235c1d6a3ef45a0f9p@chr7:100807886..100807899, -
4.61e-131FFCP PHASE1:Hg19::chr7:100808087..100808104,-#_dba9d9bd8f30f1f235c1d6a3ef45a0f9p@chr7:100808087..100808104, -
4.61e-131FFCP PHASE2:Hg19::chr7:100808087..100808104,-#_dba9d9bd8f30f1f235c1d6a3ef45a0f9p@chr7:100808087..100808104, -
4.61e-131FFCP PHASE1:Hg19::chr7:100807523..100807543,+#_dba9d9bd8f30f1f235c1d6a3ef45a0f9p@chr7:100807523..100807543, +
4.61e-131FFCP PHASE1:Hg19::chr7:100806481..100806491,-#_dba9d9bd8f30f1f235c1d6a3ef45a0f9p@chr7:100806481..100806491, -
4.61e-131FFCP PHASE2:Hg19::chr7:100807523..100807543,+#_dba9d9bd8f30f1f235c1d6a3ef45a0f9p@chr7:100807523..100807543, +
8.99e-131FFCP PHASE2:Hg19::chr6:96188999..96189001,-#_cd3ba000c6a887924e4170641ea51addp@chr6:96188999..96189001, -
8.99e-131FFCP PHASE1:Hg19::chr6:96188999..96189001,-#_cd3ba000c6a887924e4170641ea51addp@chr6:96188999..96189001, -
8.99e-131FFCP PHASE2:Hg19::chr19:35890402..35890413,+#_cd3ba000c6a887924e4170641ea51add+, p@chr19:35890402..35890413
8.99e-131FFCP PHASE1:Hg19::chr19:35890402..35890413,+#_cd3ba000c6a887924e4170641ea51addp@chr19:35890402..35890413, +
8.99e-131FFCP PHASE1:Hg19::chr7:100808304..100808313,-#_cd3ba000c6a887924e4170641ea51addp5@VGF
8.99e-131FFCP PHASE2:Hg19::chr7:100808304..100808313,-#_cd3ba000c6a887924e4170641ea51addp5@VGF
1.75e-130FFCP PHASE1:Hg19::chr12:9560067..9560068,-#_c3255f62397c19b67b57f261ef5ab14ap@chr12:9560067..9560068, -
1.75e-130FFCP PHASE2:Hg19::chr12:9560067..9560068,-#_c3255f62397c19b67b57f261ef5ab14ap@chr12:9560067..9560068, -
5.68e-99FFCP PHASE1:Hg19::chr12:100985946..100985951,+#_fe9e53ecff79bc7a9dfd9a3e8dcc2878p@chr12:100985946..100985951, +
5.68e-99FFCP PHASE2:Hg19::chr6:165597253..165597261,-#_fe9e53ecff79bc7a9dfd9a3e8dcc2878p@chr6:165597253..165597261, -
5.68e-99FFCP PHASE1:Hg19::chr7:100806199..100806216,-#_fe9e53ecff79bc7a9dfd9a3e8dcc2878p@chr7:100806199..100806216, -
5.68e-99FFCP PHASE1:Hg19::chr6:165597253..165597261,-#_fe9e53ecff79bc7a9dfd9a3e8dcc2878p@chr6:165597253..165597261, -
5.68e-99FFCP PHASE2:Hg19::chr7:100806199..100806216,-#_fe9e53ecff79bc7a9dfd9a3e8dcc2878p@chr7:100806199..100806216, -
5.68e-99FFCP PHASE2:Hg19::chr12:100985946..100985951,+#_fe9e53ecff79bc7a9dfd9a3e8dcc2878p@chr12:100985946..100985951, +
9.38e-99FFCP PHASE2:Hg19::chr22:22890694..22890704,-#_f52e895fba0bb7c54c51a8591a7869e9p8@PRAME
9.38e-99FFCP PHASE2:Hg19::chr6:165597175..165597184,-#_f52e895fba0bb7c54c51a8591a7869e9p@chr6:165597175..165597184, -
9.38e-99FFCP PHASE1:Hg19::chr6:165597175..165597184,-#_f52e895fba0bb7c54c51a8591a7869e9p@chr6:165597175..165597184, -
9.38e-99FFCP PHASE1:Hg19::chr22:22890694..22890704,-#_f52e895fba0bb7c54c51a8591a7869e9p8@PRAME
1.55e-98FFCP PHASE1:Hg19::chr7:80116896..80116907,+#_e8baf15439d907e4aa5e89abca2e8206p@chr7:80116896..80116907, +
1.55e-98FFCP PHASE1:Hg19::chr1:144866839..144866843,-#_e8baf15439d907e4aa5e89abca2e8206p77@PDE4DIP
1.55e-98FFCP PHASE1:Hg19::chr10:7576104..7576107,+#_e8baf15439d907e4aa5e89abca2e8206p@chr10:7576104..7576107, +
1.55e-98FFCP PHASE2:Hg19::chr9:22216920..22216921,+#_e8baf15439d907e4aa5e89abca2e8206p@chr9:22216920..22216921, +
1.55e-98FFCP PHASE1:Hg19::chr9:22216863..22216869,-#_e8baf15439d907e4aa5e89abca2e8206p@chr9:22216863..22216869, -
1.55e-98FFCP PHASE2:Hg19::chr7:100805847..100805856,-#_e8baf15439d907e4aa5e89abca2e8206p@chr7:100805847..100805856, -
1.55e-98FFCP PHASE2:Hg19::chr7:29898603..29898606,+#_e8baf15439d907e4aa5e89abca2e8206p@chr7:29898603..29898606, +
1.55e-98FFCP PHASE1:Hg19::chr7:100807335..100807344,+#_e8baf15439d907e4aa5e89abca2e8206p@chr7:100807335..100807344, +
1.55e-98FFCP PHASE2:Hg19::chr1:144866845..144866850,-#_e8baf15439d907e4aa5e89abca2e8206p72@PDE4DIP
1.55e-98FFCP PHASE1:Hg19::chr7:104418730..104418735,-#_e8baf15439d907e4aa5e89abca2e8206p@chr7:104418730..104418735, -
1.55e-98FFCP PHASE2:Hg19::chr7:104418730..104418735,-#_e8baf15439d907e4aa5e89abca2e8206p@chr7:104418730..104418735, -
1.55e-98FFCP PHASE1:Hg19::chr1:144866845..144866850,-#_e8baf15439d907e4aa5e89abca2e8206p72@PDE4DIP
1.55e-98FFCP PHASE1:Hg19::chr9:22216920..22216921,+#_e8baf15439d907e4aa5e89abca2e8206p@chr9:22216920..22216921, +
1.55e-98FFCP PHASE1:Hg19::chr7:100806157..100806162,-#_e8baf15439d907e4aa5e89abca2e8206p@chr7:100806157..100806162, -
1.55e-98FFCP PHASE2:Hg19::chr16:34442315..34442323,+#_e8baf15439d907e4aa5e89abca2e8206p@chr16:34442315..34442323, +
1.55e-98FFCP PHASE2:Hg19::chr7:80116896..80116907,+#_e8baf15439d907e4aa5e89abca2e8206p@chr7:80116896..80116907, +
1.55e-98FFCP PHASE2:Hg19::chr7:100807335..100807344,+#_e8baf15439d907e4aa5e89abca2e8206p@chr7:100807335..100807344, +
1.55e-98FFCP PHASE1:Hg19::chr13:95165454..95165463,-#_e8baf15439d907e4aa5e89abca2e8206p@chr13:95165454..95165463, -
1.55e-98FFCP PHASE2:Hg19::chr10:7576104..7576107,+#_e8baf15439d907e4aa5e89abca2e8206p@chr10:7576104..7576107, +
1.55e-98FFCP PHASE2:Hg19::chr1:144866760..144866765,-#_e8baf15439d907e4aa5e89abca2e8206p78@PDE4DIP
1.55e-98FFCP PHASE2:Hg19::chr7:100806157..100806162,-#_e8baf15439d907e4aa5e89abca2e8206p@chr7:100806157..100806162, -
1.55e-98FFCP PHASE1:Hg19::chr9:14869264..14869271,-#_e8baf15439d907e4aa5e89abca2e8206p27@FREM1
1.55e-98FFCP PHASE2:Hg19::chr9:22407849..22407853,+#_e8baf15439d907e4aa5e89abca2e8206p@chr9:22407849..22407853, +
1.55e-98FFCP PHASE1:Hg19::chr1:144866760..144866765,-#_e8baf15439d907e4aa5e89abca2e8206p78@PDE4DIP
1.55e-98FFCP PHASE1:Hg19::chr2:234882762..234882776,+#_e8baf15439d907e4aa5e89abca2e8206p@chr2:234882762..234882776, +
1.55e-98FFCP PHASE1:Hg19::chr8:105044082..105044088,-#_e8baf15439d907e4aa5e89abca2e8206p@chr8:105044082..105044088, -
1.55e-98FFCP PHASE1:Hg19::chr7:104422480..104422488,-#_e8baf15439d907e4aa5e89abca2e8206p@chr7:104422480..104422488, -
1.55e-98FFCP PHASE2:Hg19::chr2:234882762..234882776,+#_e8baf15439d907e4aa5e89abca2e8206p@chr2:234882762..234882776, +
1.55e-98FFCP PHASE1:Hg19::chr14:36536439..36536442,-#_e8baf15439d907e4aa5e89abca2e8206p3@ENST00000546376
1.55e-98FFCP PHASE1:Hg19::chr7:100805828..100805836,-#_e8baf15439d907e4aa5e89abca2e8206p@chr7:100805828..100805836, -
1.55e-98FFCP PHASE2:Hg19::chr7:104422480..104422488,-#_e8baf15439d907e4aa5e89abca2e8206p@chr7:104422480..104422488, -
1.55e-98FFCP PHASE2:Hg19::chr13:95165454..95165463,-#_e8baf15439d907e4aa5e89abca2e8206-, p@chr13:95165454..95165463
1.55e-98FFCP PHASE2:Hg19::chr19:19638023..19638028,+#_e8baf15439d907e4aa5e89abca2e8206p@chr19:19638023..19638028, +
1.55e-98FFCP PHASE2:Hg19::chr6:134871317..134871322,+#_e8baf15439d907e4aa5e89abca2e8206p@chr6:134871317..134871322, +
1.55e-98FFCP PHASE2:Hg19::chr1:144866830..144866835,-#_e8baf15439d907e4aa5e89abca2e8206p74@PDE4DIP
1.55e-98FFCP PHASE2:Hg19::chr8:105044082..105044088,-#_e8baf15439d907e4aa5e89abca2e8206p@chr8:105044082..105044088, -
1.55e-98FFCP PHASE2:Hg19::chr9:14869264..14869271,-#_e8baf15439d907e4aa5e89abca2e8206p27@FREM1
1.55e-98FFCP PHASE1:Hg19::chr9:105414888..105414895,-#_e8baf15439d907e4aa5e89abca2e8206p@chr9:105414888..105414895, -
1.55e-98FFCP PHASE2:Hg19::chr14:36536439..36536442,-#_e8baf15439d907e4aa5e89abca2e8206p3@ENST00000546376
1.55e-98FFCP PHASE1:Hg19::chr9:22407849..22407853,+#_e8baf15439d907e4aa5e89abca2e8206p@chr9:22407849..22407853, +
1.55e-98FFCP PHASE1:Hg19::chr1:144866830..144866835,-#_e8baf15439d907e4aa5e89abca2e8206p74@PDE4DIP
1.55e-98FFCP PHASE2:Hg19::chr9:22216863..22216869,-#_e8baf15439d907e4aa5e89abca2e8206p@chr9:22216863..22216869, -
1.55e-98FFCP PHASE1:Hg19::chr7:104427340..104427345,-#_e8baf15439d907e4aa5e89abca2e8206p@chr7:104427340..104427345, -
1.55e-98FFCP PHASE2:Hg19::chr7:100805828..100805836,-#_e8baf15439d907e4aa5e89abca2e8206p@chr7:100805828..100805836, -
1.55e-98FFCP PHASE1:Hg19::chr7:100805847..100805856,-#_e8baf15439d907e4aa5e89abca2e8206p@chr7:100805847..100805856, -
1.55e-98FFCP PHASE2:Hg19::chr7:104427340..104427345,-#_e8baf15439d907e4aa5e89abca2e8206-, p@chr7:104427340..104427345
1.55e-98FFCP PHASE2:Hg19::chr9:105414888..105414895,-#_e8baf15439d907e4aa5e89abca2e8206p@chr9:105414888..105414895, -
1.55e-98FFCP PHASE1:Hg19::chr16:34442315..34442323,+#_e8baf15439d907e4aa5e89abca2e8206p@chr16:34442315..34442323, +
1.55e-98FFCP PHASE1:Hg19::chr7:29898603..29898606,+#_e8baf15439d907e4aa5e89abca2e8206p@chr7:29898603..29898606, +
1.55e-98FFCP PHASE2:Hg19::chr1:144866839..144866843,-#_e8baf15439d907e4aa5e89abca2e8206p77@PDE4DIP
1.55e-98FFCP PHASE1:Hg19::chr19:19638023..19638028,+#_e8baf15439d907e4aa5e89abca2e8206p@chr19:19638023..19638028, +
1.55e-98FFCP PHASE1:Hg19::chr6:134871317..134871322,+#_e8baf15439d907e4aa5e89abca2e8206p@chr6:134871317..134871322, +
1.05e-79FFCP PHASE1:Hg19::chr2:12455600..12455618,+#_2304ee776eef98108bc6352a5ab48d32p@chr2:12455600..12455618, +
1.05e-79FFCP PHASE2:Hg19::chr6:165597234..165597249,-#_2304ee776eef98108bc6352a5ab48d32p@chr6:165597234..165597249, -
1.05e-79FFCP PHASE2:Hg19::chr2:12455600..12455618,+#_2304ee776eef98108bc6352a5ab48d32p@chr2:12455600..12455618, +
1.05e-79FFCP PHASE1:Hg19::chr7:100807359..100807373,-#_2304ee776eef98108bc6352a5ab48d32p@chr7:100807359..100807373, -
1.05e-79FFCP PHASE1:Hg19::chr6:165597234..165597249,-#_2304ee776eef98108bc6352a5ab48d32p@chr6:165597234..165597249, -
1.05e-79FFCP PHASE2:Hg19::chr19:35890435..35890446,+#_2304ee776eef98108bc6352a5ab48d32p@chr19:35890435..35890446, +