Personal tools

DOID:3151

From FANTOM5_SSTAR

Jump to: navigation, search

Name:skin squamous cell carcinoma
Namespace:FANTOM
Xrefs:
links:

NCI:C4819
SNOMEDCT_2010_1_31:254651007

UMLS_CUI:C0553723
Synonyms: "Epidermoid skin carcinoma" EXACT [NCI2004_11_17:C4819]
"squamous cell carcinoma of skin" RELATED []
"squamous cell carcinoma of skin (disorder)" EXACT [SNOMEDCT_2005_07_31:254651007]

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:3451(skin carcinoma)



Children


is a:DOID:3149 (keratoacanthoma)


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3151 (skin squamous cell carcinoma), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.55e-98FFCP PHASE1:Hg19::chr8:123875147..123875159,+#_eed4bab8adc94442c22b18b75a580625p26@ZHX2
2.55e-98FFCP PHASE1:Hg19::chr7:101448277..101448287,+#_eed4bab8adc94442c22b18b75a580625p@chr7:101448277..101448287, +
2.55e-98FFCP PHASE1:Hg19::chr7:101448101..101448113,+#_eed4bab8adc94442c22b18b75a580625p@chr7:101448101..101448113, +
2.55e-98FFCP PHASE2:Hg19::chr1:153431372..153431378,-#_eed4bab8adc94442c22b18b75a580625p4@S100A7
2.55e-98FFCP PHASE2:Hg19::chr7:101448249..101448254,+#_eed4bab8adc94442c22b18b75a580625+, p@chr7:101448249..101448254
2.55e-98FFCP PHASE1:Hg19::chr7:101448176..101448184,+#_eed4bab8adc94442c22b18b75a580625p@chr7:101448176..101448184, +
2.55e-98FFCP PHASE2:Hg19::chr7:101448277..101448287,+#_eed4bab8adc94442c22b18b75a580625p@chr7:101448277..101448287, +
2.55e-98FFCP PHASE1:Hg19::chr1:153431372..153431378,-#_eed4bab8adc94442c22b18b75a580625p4@S100A7
2.55e-98FFCP PHASE2:Hg19::chr7:101448101..101448113,+#_eed4bab8adc94442c22b18b75a580625p@chr7:101448101..101448113, +
2.55e-98FFCP PHASE2:Hg19::chr8:123875147..123875159,+#_eed4bab8adc94442c22b18b75a580625p26@ZHX2
2.55e-98FFCP PHASE2:Hg19::chr7:101448176..101448184,+#_eed4bab8adc94442c22b18b75a580625p@chr7:101448176..101448184, +
2.55e-98FFCP PHASE1:Hg19::chr7:101448249..101448254,+#_eed4bab8adc94442c22b18b75a580625p@chr7:101448249..101448254, +
1.23e-66FFCP PHASE1:Hg19::chr9:97563078..97563086,+#_ff83e814e0f0efeae7ae342d853e73e5p@chr9:97563078..97563086, +
1.23e-66FFCP PHASE1:Hg19::chr20:49047228..49047236,-#_ff83e814e0f0efeae7ae342d853e73e5p@chr20:49047228..49047236, -
1.23e-66FFCP PHASE2:Hg19::chr9:97563078..97563086,+#_ff83e814e0f0efeae7ae342d853e73e5p@chr9:97563078..97563086, +
1.23e-66FFCP PHASE2:Hg19::chr20:49047228..49047236,-#_ff83e814e0f0efeae7ae342d853e73e5p@chr20:49047228..49047236, -
2.39e-66FFCP PHASE1:Hg19::chr1:76127067..76127073,-#_47e91bdf5a7573ddf3999e3317157e11-, p@chr1:76127067..76127073
2.39e-66FFCP PHASE1:Hg19::chr18:61254400..61254410,+#_47e91bdf5a7573ddf3999e3317157e11p8@SERPINB13
2.39e-66FFCP PHASE2:Hg19::chr17:19648916..19648937,-#_47e91bdf5a7573ddf3999e3317157e11p10@ALDH3A1
2.39e-66FFCP PHASE1:Hg19::chr17:19648916..19648937,-#_47e91bdf5a7573ddf3999e3317157e11p10@ALDH3A1
2.39e-66FFCP PHASE2:Hg19::chr18:61254400..61254410,+#_47e91bdf5a7573ddf3999e3317157e11p8@SERPINB13
2.39e-66FFCP PHASE2:Hg19::chr1:76127067..76127073,-#_47e91bdf5a7573ddf3999e3317157e11p@chr1:76127067..76127073, -
4.66e-66FFCP PHASE2:Hg19::chr3:193809263..193809278,+#_fb48c7b5f19f3793d83500c3eba4cec2p1@ENST00000457815
4.66e-66FFCP PHASE2:Hg19::chr19:51517875..51517889,-#_fb48c7b5f19f3793d83500c3eba4cec2p3@AK026045
4.66e-66FFCP PHASE1:Hg19::chr19:51517875..51517889,-#_fb48c7b5f19f3793d83500c3eba4cec2p3@AK026045
4.66e-66FFCP PHASE2:Hg19::chr1:18085798..18085805,+#_fb48c7b5f19f3793d83500c3eba4cec2p@chr1:18085798..18085805, +
4.66e-66FFCP PHASE1:Hg19::chr2:178179611..178179619,-#_fb48c7b5f19f3793d83500c3eba4cec2p4@ENST00000443132
4.66e-66FFCP PHASE2:Hg19::chr2:178179611..178179619,-#_fb48c7b5f19f3793d83500c3eba4cec2p4@ENST00000443132
4.66e-66FFCP PHASE1:Hg19::chr1:18085798..18085805,+#_fb48c7b5f19f3793d83500c3eba4cec2p@chr1:18085798..18085805, +
4.66e-66FFCP PHASE2:Hg19::chr13:28542963..28542973,-#_fb48c7b5f19f3793d83500c3eba4cec2p1@CU677005
4.66e-66FFCP PHASE1:Hg19::chr13:28542963..28542973,-#_fb48c7b5f19f3793d83500c3eba4cec2p1@CU677005
4.66e-66FFCP PHASE1:Hg19::chr17:48072063..48072074,-#_fb48c7b5f19f3793d83500c3eba4cec2p5@DLX3
4.66e-66FFCP PHASE2:Hg19::chr17:48072063..48072074,-#_fb48c7b5f19f3793d83500c3eba4cec2p5@DLX3
4.66e-66FFCP PHASE2:Hg19::chr1:10980427..10980431,-#_fb48c7b5f19f3793d83500c3eba4cec2-, p@chr1:10980427..10980431
4.66e-66FFCP PHASE1:Hg19::chr3:193809263..193809278,+#_fb48c7b5f19f3793d83500c3eba4cec2p1@ENST00000457815
4.66e-66FFCP PHASE1:Hg19::chr1:10980427..10980431,-#_fb48c7b5f19f3793d83500c3eba4cec2p@chr1:10980427..10980431, -
1.46e-50FFCP PHASE1:Hg19::chr1:151826151..151826159,-#_76df07ba9ba62c06c173710979a927d5p3@THEM5
1.46e-50FFCP PHASE2:Hg19::chr16:55600644..55600645,+#_76df07ba9ba62c06c173710979a927d5p2@CAPNS2
1.46e-50FFCP PHASE1:Hg19::chr16:55600644..55600645,+#_76df07ba9ba62c06c173710979a927d5p2@CAPNS2
1.46e-50FFCP PHASE2:Hg19::chr5:1884077..1884085,+#_76df07ba9ba62c06c173710979a927d5p1@ENST00000506335
1.46e-50FFCP PHASE2:Hg19::chr1:151826151..151826159,-#_76df07ba9ba62c06c173710979a927d5p3@THEM5
1.46e-50FFCP PHASE1:Hg19::chr5:1884077..1884085,+#_76df07ba9ba62c06c173710979a927d5p1@ENST00000506335
2.42e-50FFCP PHASE2:Hg19::chr7:101448204..101448229,+#_55f309b065798029ba47f34971d64345p@chr7:101448204..101448229, +
2.42e-50FFCP PHASE1:Hg19::chr1:86921028..86921032,+#_55f309b065798029ba47f34971d64345p@chr1:86921028..86921032, +
2.42e-50FFCP PHASE1:Hg19::chr17:77774350..77774360,+#_55f309b065798029ba47f34971d64345p@chr17:77774350..77774360, +
2.42e-50FFCP PHASE1:Hg19::chr8:120233966..120233975,+#_55f309b065798029ba47f34971d64345p@chr8:120233966..120233975, +
2.42e-50FFCP PHASE2:Hg19::chr8:123875131..123875140,+#_55f309b065798029ba47f34971d64345p25@ZHX2
2.42e-50FFCP PHASE2:Hg19::chr17:77774350..77774360,+#_55f309b065798029ba47f34971d64345p@chr17:77774350..77774360, +
2.42e-50FFCP PHASE1:Hg19::chr12:130647145..130647153,+#_55f309b065798029ba47f34971d64345p3@FZD10
2.42e-50FFCP PHASE1:Hg19::chr7:101448204..101448229,+#_55f309b065798029ba47f34971d64345p@chr7:101448204..101448229, +
2.42e-50FFCP PHASE2:Hg19::chr8:120233966..120233975,+#_55f309b065798029ba47f34971d64345+, p@chr8:120233966..120233975
2.42e-50FFCP PHASE1:Hg19::chr8:123875131..123875140,+#_55f309b065798029ba47f34971d64345p25@ZHX2
2.42e-50FFCP PHASE2:Hg19::chr1:86921028..86921032,+#_55f309b065798029ba47f34971d64345p@chr1:86921028..86921032, +
2.42e-50FFCP PHASE2:Hg19::chr12:130647145..130647153,+#_55f309b065798029ba47f34971d64345p3@FZD10
3.99e-50FFCP PHASE1:Hg19::chr2:234526341..234526346,+#_336347651b7da94fe272a6411fa2289bp1@UGT1A8
3.99e-50FFCP PHASE2:Hg19::chr2:234526341..234526346,+#_336347651b7da94fe272a6411fa2289bp1@UGT1A8
6.58e-50FFCP PHASE1:Hg19::chr3:136885144..136885147,+#_61a740a3e726bcdd8453bfdd2b4c5400p@chr3:136885144..136885147, +
6.58e-50FFCP PHASE2:Hg19::chr1:153430422..153430443,-#_61a740a3e726bcdd8453bfdd2b4c5400p3@S100A7
6.58e-50FFCP PHASE2:Hg19::chr14:65406349..65406358,+#_61a740a3e726bcdd8453bfdd2b4c5400p@chr14:65406349..65406358, +
6.58e-50FFCP PHASE1:Hg19::chr10:54259346..54259353,+#_61a740a3e726bcdd8453bfdd2b4c5400p@chr10:54259346..54259353, +
6.58e-50FFCP PHASE1:Hg19::chr1:153430422..153430443,-#_61a740a3e726bcdd8453bfdd2b4c5400p3@S100A7
6.58e-50FFCP PHASE1:Hg19::chr4:152117165..152117168,+#_61a740a3e726bcdd8453bfdd2b4c5400p@chr4:152117165..152117168, +
6.58e-50FFCP PHASE1:Hg19::chr1:118570948..118570964,-#_61a740a3e726bcdd8453bfdd2b4c5400p@chr1:118570948..118570964, -
6.58e-50FFCP PHASE2:Hg19::chr4:152117165..152117168,+#_61a740a3e726bcdd8453bfdd2b4c5400p@chr4:152117165..152117168, +
6.58e-50FFCP PHASE2:Hg19::chr10:127591699..127591713,-#_61a740a3e726bcdd8453bfdd2b4c5400p@chr10:127591699..127591713, -
6.58e-50FFCP PHASE2:Hg19::chr10:54259346..54259353,+#_61a740a3e726bcdd8453bfdd2b4c5400p@chr10:54259346..54259353, +
6.58e-50FFCP PHASE1:Hg19::chr14:65406349..65406358,+#_61a740a3e726bcdd8453bfdd2b4c5400p@chr14:65406349..65406358, +
6.58e-50FFCP PHASE1:Hg19::chr10:127591699..127591713,-#_61a740a3e726bcdd8453bfdd2b4c5400-, p@chr10:127591699..127591713
6.58e-50FFCP PHASE2:Hg19::chr1:118570948..118570964,-#_61a740a3e726bcdd8453bfdd2b4c5400p@chr1:118570948..118570964, -
6.58e-50FFCP PHASE2:Hg19::chr3:136885144..136885147,+#_61a740a3e726bcdd8453bfdd2b4c5400p@chr3:136885144..136885147, +
6.62e-41FFCP PHASE1:Hg19::chr17:39674844..39674854,+#_4c45d5400f3b2f0a52acfc5091fb2a0cp@chr17:39674844..39674854, +
6.62e-41FFCP PHASE1:Hg19::chr1:152572708..152572714,+#_4c45d5400f3b2f0a52acfc5091fb2a0cp1@LCE3C
6.62e-41FFCP PHASE2:Hg19::chr10:5567644..5567657,+#_4c45d5400f3b2f0a52acfc5091fb2a0cp@chr10:5567644..5567657, +
6.62e-41FFCP PHASE2:Hg19::chr17:39674844..39674854,+#_4c45d5400f3b2f0a52acfc5091fb2a0c+, p@chr17:39674844..39674854
6.62e-41FFCP PHASE2:Hg19::chr1:152572708..152572714,+#_4c45d5400f3b2f0a52acfc5091fb2a0cp1@LCE3C
6.62e-41FFCP PHASE1:Hg19::chr10:5567644..5567657,+#_4c45d5400f3b2f0a52acfc5091fb2a0cp@chr10:5567644..5567657, +
9.91e-41FFCP PHASE2:Hg19::chr5:67829374..67829382,-#_0cc3988b604c0192fa73b1e9df2dd94ap1@ENST00000515199
9.91e-41FFCP PHASE1:Hg19::chr17:39675950..39675974,-#_0cc3988b604c0192fa73b1e9df2dd94ap@chr17:39675950..39675974, -
9.91e-41FFCP PHASE1:Hg19::chr8:123875175..123875188,+#_0cc3988b604c0192fa73b1e9df2dd94ap22@ZHX2
9.91e-41FFCP PHASE2:Hg19::chr3:141678730..141678768,-#_0cc3988b604c0192fa73b1e9df2dd94ap@chr3:141678730..141678768, -
9.91e-41FFCP PHASE1:Hg19::chr3:141678730..141678768,-#_0cc3988b604c0192fa73b1e9df2dd94ap@chr3:141678730..141678768, -
9.91e-41FFCP PHASE2:Hg19::chr8:123875175..123875188,+#_0cc3988b604c0192fa73b1e9df2dd94ap22@ZHX2
9.91e-41FFCP PHASE1:Hg19::chr5:67829374..67829382,-#_0cc3988b604c0192fa73b1e9df2dd94ap1@ENST00000515199
9.91e-41FFCP PHASE2:Hg19::chr17:39675950..39675974,-#_0cc3988b604c0192fa73b1e9df2dd94ap@chr17:39675950..39675974, -
1.48e-40FFCP PHASE1:Hg19::chr17:39767356..39767365,+#_1536b1a9e635e0e5482e3b4ac13911f0p@chr17:39767356..39767365, +
1.48e-40FFCP PHASE1:Hg19::chr10:4951559..4951578,+#_1536b1a9e635e0e5482e3b4ac13911f0p@chr10:4951559..4951578, +
1.48e-40FFCP PHASE2:Hg19::chr17:39767356..39767365,+#_1536b1a9e635e0e5482e3b4ac13911f0p@chr17:39767356..39767365, +
1.48e-40FFCP PHASE2:Hg19::chr10:4951559..4951578,+#_1536b1a9e635e0e5482e3b4ac13911f0p@chr10:4951559..4951578, +
2.21e-40FFCP PHASE2:Hg19::chr21:23573043..23573054,+#_ee1830dbb42022889b253a46d046f1e1p@chr21:23573043..23573054, +
2.21e-40FFCP PHASE1:Hg19::chr22:48134043..48134048,+#_ee1830dbb42022889b253a46d046f1e1p@chr22:48134043..48134048, +
2.21e-40FFCP PHASE1:Hg19::chr21:23573043..23573054,+#_ee1830dbb42022889b253a46d046f1e1p@chr21:23573043..23573054, +
2.21e-40FFCP PHASE2:Hg19::chr22:48134043..48134048,+#_ee1830dbb42022889b253a46d046f1e1p@chr22:48134043..48134048, +
3.3e-40FFCP PHASE2:Hg19::chr17:7990883..7990893,-#_d5ba81f0b5ddf6775429ee8f60160938p5@ALOX12B
3.3e-40FFCP PHASE2:Hg19::chr5:16492681..16492683,+#_d5ba81f0b5ddf6775429ee8f60160938p@chr5:16492681..16492683, +
3.3e-40FFCP PHASE1:Hg19::chr4:15937680..15937694,+#_d5ba81f0b5ddf6775429ee8f60160938p@chr4:15937680..15937694, +
3.3e-40FFCP PHASE1:Hg19::chr8:120128977..120128984,-#_d5ba81f0b5ddf6775429ee8f60160938p@chr8:120128977..120128984, -
3.3e-40FFCP PHASE1:Hg19::chr5:16492681..16492683,+#_d5ba81f0b5ddf6775429ee8f60160938p@chr5:16492681..16492683, +
3.3e-40FFCP PHASE2:Hg19::chr8:120128977..120128984,-#_d5ba81f0b5ddf6775429ee8f60160938p@chr8:120128977..120128984, -
3.3e-40FFCP PHASE1:Hg19::chr17:7990883..7990893,-#_d5ba81f0b5ddf6775429ee8f60160938p5@ALOX12B
3.3e-40FFCP PHASE2:Hg19::chr10:127591732..127591739,-#_d5ba81f0b5ddf6775429ee8f60160938p@chr10:127591732..127591739, -