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DOID:3620

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Name:central nervous system cancer
Namespace:FANTOM
Definition:"A nervous system cancer that is located_in the central nervous system." [url:http://en.wikipedia.org/wiki/Central_nervous_system]
Xrefs:
links:

MSH:D016543
NCI:C9293
SNOMEDCT_2010_1_31:126951006
SNOMEDCT_2010_1_31:190135002
SNOMEDCT_2010_1_31:372062007
SNOMEDCT_2010_1_31:93744007
UMLS_CUI:C0085136

UMLS_CUI:C0348374
Synonyms: "central nervous system cancer" EXACT []
"central nervous system tumor" EXACT []
"central nervous system tumors" EXACT [NCI2004_11_17:C9293]
"CNS neoplasm" EXACT [CSP2005:2012-5421]
"malignant neoplasm of central nervous system (disorder)" EXACT [SNOMEDCT_2005_07_31:372062007]
"malignant neoplasm of central nervous system NOS" EXACT [MTHICD9_2006:192.9]
"malignant neoplasm of central nervous system, NOS" EXACT [SNOMEDCT_2005_07_31:93744007]
"malignant neoplasm of central nervous system, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190135002]
"malignant tumor of CNS" EXACT [NCI2004_11_17:C4627]
"neoplasm of central nervous system (disorder)" EXACT [SNOMEDCT_2005_07_31:126951006]
Alt_id: DOID:0060093
DOID:1318

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:3093(nervous system cancer)



Children


is a:DOID:1319 (brain cancer),DOID:3565 (meningioma)


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3620 (central nervous system cancer), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr10:45295885..45295915,-#_65204098875bac0ffc0040b979d80a87p@chr10:45295885..45295915, -
5.42e-195FFCP PHASE2:Hg19::chr10:45295885..45295915,-#_65204098875bac0ffc0040b979d80a87p@chr10:45295885..45295915, -
9.37e-99FFCP PHASE2:Hg19::chr12:12094754..12094758,+#_37559503d33923695d0abf7bf2a7f412p@chr12:12094754..12094758, +
9.37e-99FFCP PHASE1:Hg19::chr12:12094754..12094758,+#_37559503d33923695d0abf7bf2a7f412p@chr12:12094754..12094758, +
1.23e-66FFCP PHASE1:Hg19::chr2:235107734..235107745,-#_862a5a5a572fb0256fc09a21a9ff1a51p@chr2:235107734..235107745, -
1.23e-66FFCP PHASE2:Hg19::chr2:235107734..235107745,-#_862a5a5a572fb0256fc09a21a9ff1a51-, p@chr2:235107734..235107745
2.39e-66FFCP PHASE1:Hg19::chr2:135170027..135170035,+#_418dd607d353e64b34e2a2c64340eedfp@chr2:135170027..135170035, +
2.39e-66FFCP PHASE2:Hg19::chr2:135170027..135170035,+#_418dd607d353e64b34e2a2c64340eedfp@chr2:135170027..135170035, +
4.66e-66FFCP PHASE2:Hg19::chr1:8251750..8251759,+#_51d642656fcff20b23cc1ea692582b02p@chr1:8251750..8251759, +
4.66e-66FFCP PHASE1:Hg19::chr1:8251750..8251759,+#_51d642656fcff20b23cc1ea692582b02p@chr1:8251750..8251759, +
1.46e-50FFCP PHASE1:Hg19::chr12:31158902..31158914,-#_510eade7e545c6f7a607f9d25754bab7p2@ENST00000544329
1.46e-50FFCP PHASE2:Hg19::chr12:31158902..31158914,-#_510eade7e545c6f7a607f9d25754bab7p2@ENST00000544329
1.46e-50FFCP PHASE2:Hg19::chr2:113668763..113668773,+#_510eade7e545c6f7a607f9d25754bab7p@chr2:113668763..113668773, +
1.46e-50FFCP PHASE1:Hg19::chr2:113668763..113668773,+#_510eade7e545c6f7a607f9d25754bab7p@chr2:113668763..113668773, +
1.46e-50FFCP PHASE2:Hg19::chr5:174151841..174151852,+#_510eade7e545c6f7a607f9d25754bab7p7@MSX2
1.46e-50FFCP PHASE1:Hg19::chr5:174151841..174151852,+#_510eade7e545c6f7a607f9d25754bab7p7@MSX2
2.42e-50FFCP PHASE1:Hg19::chr12:52698999..52699008,+#_0ac265f72436437862538dcb1574eb65p@chr12:52698999..52699008, +
2.42e-50FFCP PHASE2:Hg19::chr12:52698999..52699008,+#_0ac265f72436437862538dcb1574eb65p@chr12:52698999..52699008, +
6.62e-41FFCP PHASE1:Hg19::chr7:142563227..142563251,+#_501d5e9806149855bdcc616bf977b23bp@chr7:142563227..142563251, +
6.62e-41FFCP PHASE2:Hg19::chr7:142563227..142563251,+#_501d5e9806149855bdcc616bf977b23bp@chr7:142563227..142563251, +
9.91e-41FFCP PHASE1:Hg19::chr16:86612112..86612123,+#_2dd57dcb9cde0b48c81d8b6489141c80p5@FOXL1
9.91e-41FFCP PHASE2:Hg19::chr16:86612112..86612123,+#_2dd57dcb9cde0b48c81d8b6489141c80p5@FOXL1
1.48e-40FFCP PHASE1:Hg19::chr12:52679917..52679933,-#_5fc7338504f317518313971c755b990ap@chr12:52679917..52679933, -
1.48e-40FFCP PHASE2:Hg19::chr12:52679917..52679933,-#_5fc7338504f317518313971c755b990ap@chr12:52679917..52679933, -
2.21e-40FFCP PHASE1:Hg19::chr19:41447981..41448001,+#_df3c498ad70cb269b2356a8521a4f05fp@chr19:41447981..41448001, +
2.21e-40FFCP PHASE1:Hg19::chr17:22069559..22069568,-#_df3c498ad70cb269b2356a8521a4f05fp@chr17:22069559..22069568, -
2.21e-40FFCP PHASE2:Hg19::chr17:22069559..22069568,-#_df3c498ad70cb269b2356a8521a4f05fp@chr17:22069559..22069568, -
2.21e-40FFCP PHASE2:Hg19::chr19:41447981..41448001,+#_df3c498ad70cb269b2356a8521a4f05fp@chr19:41447981..41448001, +
2.58e-34FFCP PHASE1:Hg19::chr15:69339407..69339410,+#_9e4b416be53468bbad968d256353e61cp3@NOX5
2.58e-34FFCP PHASE2:Hg19::chr15:69339407..69339410,+#_9e4b416be53468bbad968d256353e61cp3@NOX5
3.61e-34FFCP PHASE2:Hg19::chr16:83033869..83033872,+#_23a0422a2d41127ccaa8639edd22a6d6p@chr16:83033869..83033872, +
3.61e-34FFCP PHASE1:Hg19::chr16:83033869..83033872,+#_23a0422a2d41127ccaa8639edd22a6d6p@chr16:83033869..83033872, +
5.05e-34FFCP PHASE2:Hg19::chr2:113562551..113562554,-#_81fb8d09a72196733ed42c31325b9034p@chr2:113562551..113562554, -
5.05e-34FFCP PHASE1:Hg19::chr2:113562551..113562554,-#_81fb8d09a72196733ed42c31325b9034p@chr2:113562551..113562554, -
7.06e-34FFCP PHASE2:Hg19::chr7:3284005..3284016,-#_d4ecf675d5d39e0853fe1398bf08b7b6p@chr7:3284005..3284016, -
7.06e-34FFCP PHASE2:Hg19::chr18:60262589..60262593,+#_d4ecf675d5d39e0853fe1398bf08b7b6p@chr18:60262589..60262593, +
7.06e-34FFCP PHASE1:Hg19::chr20:50245629..50245639,-#_d4ecf675d5d39e0853fe1398bf08b7b6p@chr20:50245629..50245639, -
7.06e-34FFCP PHASE1:Hg19::chr7:3284005..3284016,-#_d4ecf675d5d39e0853fe1398bf08b7b6p@chr7:3284005..3284016, -
7.06e-34FFCP PHASE1:Hg19::chr18:60262589..60262593,+#_d4ecf675d5d39e0853fe1398bf08b7b6p@chr18:60262589..60262593, +
7.06e-34FFCP PHASE1:Hg19::chr17:30059110..30059117,+#_d4ecf675d5d39e0853fe1398bf08b7b6p@chr17:30059110..30059117, +
7.06e-34FFCP PHASE2:Hg19::chr20:50245629..50245639,-#_d4ecf675d5d39e0853fe1398bf08b7b6p@chr20:50245629..50245639, -
7.06e-34FFCP PHASE2:Hg19::chr17:30059110..30059117,+#_d4ecf675d5d39e0853fe1398bf08b7b6p@chr17:30059110..30059117, +
9.85e-34FFCP PHASE1:Hg19::chr9:127635073..127635077,+#_f3e221728f6fbfa7c7fbe74176218c88p7@ARPC5L
9.85e-34FFCP PHASE2:Hg19::chr9:127635073..127635077,+#_f3e221728f6fbfa7c7fbe74176218c88p7@ARPC5L
7.48e-30FFCP PHASE1:Hg19::chr22:33265699..33265702,+#_b204f6d796ec8d8de7e3ad58f65c06f4p@chr22:33265699..33265702, +
7.48e-30FFCP PHASE2:Hg19::chr22:33265699..33265702,+#_b204f6d796ec8d8de7e3ad58f65c06f4p@chr22:33265699..33265702, +
9.99e-30FFCP PHASE2:Hg19::chr16:83371254..83371258,+#_424b1a1ad7346315772c7209367a2c2dp@chr16:83371254..83371258, +
9.99e-30FFCP PHASE1:Hg19::chr16:83371254..83371258,+#_424b1a1ad7346315772c7209367a2c2dp@chr16:83371254..83371258, +
2.37e-29FFCP PHASE2:Hg19::chr5:1882184..1882203,-#_b3837e0c908f305deaeab629cc46b746p4@IRX4
2.37e-29FFCP PHASE1:Hg19::chr5:1882184..1882203,-#_b3837e0c908f305deaeab629cc46b746p4@IRX4
3.16e-29FFCP PHASE1:Hg19::chr19:28936188..28936202,+#_0c1bff60fe0ad9dc3741eb1f735b526ep@chr19:28936188..28936202, +
3.16e-29FFCP PHASE2:Hg19::chr19:28936188..28936202,+#_0c1bff60fe0ad9dc3741eb1f735b526ep@chr19:28936188..28936202, +
4.2e-29FFCP PHASE2:Hg19::chr21:43771226..43771242,-#_bc8a612ff08196937d968d312b22ed22p3@TFF2
4.2e-29FFCP PHASE1:Hg19::chr21:43771226..43771242,-#_bc8a612ff08196937d968d312b22ed22p3@TFF2
2.16e-26FFCP PHASE2:Hg19::chr6:31304866..31304870,-#_03a30d272c3b6339c0751b5858374f57p@chr6:31304866..31304870, -
2.16e-26FFCP PHASE1:Hg19::chr6:31304866..31304870,-#_03a30d272c3b6339c0751b5858374f57p@chr6:31304866..31304870, -
2.78e-26FFCP PHASE2:Hg19::chr20:49983328..49983340,+#_56f9da47528965e6c3e258f449af4061p@chr20:49983328..49983340, +
2.78e-26FFCP PHASE1:Hg19::chr20:49983328..49983340,+#_56f9da47528965e6c3e258f449af4061p@chr20:49983328..49983340, +
3.58e-26FFCP PHASE1:Hg19::chr11:121910956..121910960,-#_26be36b65c4b98e1e2255974d23deaffp@chr11:121910956..121910960, -
3.58e-26FFCP PHASE2:Hg19::chr11:121910956..121910960,-#_26be36b65c4b98e1e2255974d23deaffp@chr11:121910956..121910960, -
4.61e-26FFCP PHASE2:Hg19::chr9:21468453..21468457,-#_102ab3dae640fb4dade169c048aba35cp@chr9:21468453..21468457, -
4.61e-26FFCP PHASE1:Hg19::chr9:21468453..21468457,-#_102ab3dae640fb4dade169c048aba35cp@chr9:21468453..21468457, -
5.93e-26FFCP PHASE1:Hg19::chr1:91328490..91328494,-#_62618f0ab9fade36e54b2ae8b622ec98p@chr1:91328490..91328494, -
5.93e-26FFCP PHASE2:Hg19::chr1:91328490..91328494,-#_62618f0ab9fade36e54b2ae8b622ec98p@chr1:91328490..91328494, -
9.79e-26FFCP PHASE1:Hg19::chr11:10066159..10066186,-#_9d82803f24f4c37c9d438b7705113de2p3@SBF2
9.79e-26FFCP PHASE2:Hg19::chr6:31815396..31815402,+#_9d82803f24f4c37c9d438b7705113de2p@chr6:31815396..31815402, +
9.79e-26FFCP PHASE1:Hg19::chr6:31815396..31815402,+#_9d82803f24f4c37c9d438b7705113de2p@chr6:31815396..31815402, +
9.79e-26FFCP PHASE2:Hg19::chr11:10066159..10066186,-#_9d82803f24f4c37c9d438b7705113de2p3@SBF2
1.26e-25FFCP PHASE2:Hg19::chr2:135170403..135170416,+#_f4d6cac48ee70dafbc8df8599499744fp@chr2:135170403..135170416, +
1.26e-25FFCP PHASE1:Hg19::chr2:135170403..135170416,+#_f4d6cac48ee70dafbc8df8599499744fp@chr2:135170403..135170416, +
1.07e-23FFCP PHASE1:Hg19::chr7:142558870..142558879,-#_3cfbfc4f4941da23b78b281483b588f5p@chr7:142558870..142558879, -
1.07e-23FFCP PHASE2:Hg19::chr7:142558870..142558879,-#_3cfbfc4f4941da23b78b281483b588f5-, p@chr7:142558870..142558879
1.07e-23FFCP PHASE2:Hg19::chr14:65823553..65823594,+#_3cfbfc4f4941da23b78b281483b588f5p@chr14:65823553..65823594, +
1.07e-23FFCP PHASE1:Hg19::chr14:65823553..65823594,+#_3cfbfc4f4941da23b78b281483b588f5p@chr14:65823553..65823594, +
1.34e-23FFCP PHASE2:Hg19::chr14:102704175..102704202,-#_8346664c0a00e0d9a9c53e48029a00acp@chr14:102704175..102704202, -
1.34e-23FFCP PHASE1:Hg19::chr14:102704175..102704202,-#_8346664c0a00e0d9a9c53e48029a00acp@chr14:102704175..102704202, -
2.62e-23FFCP PHASE2:Hg19::chr11:1213314..1213323,+#_e7177bdad8cbf931740d582c7dfa94ebp7@uc001lsz.2
2.62e-23FFCP PHASE1:Hg19::chr11:1213314..1213323,+#_e7177bdad8cbf931740d582c7dfa94ebp7@uc001lsz.2
4.1e-23FFCP PHASE1:Hg19::chr14:102704788..102704801,-#_2a2202f0fef3161932cd44fedecffda2p10@MOK
4.1e-23FFCP PHASE1:Hg19::chr15:101445820..101445832,-#_2a2202f0fef3161932cd44fedecffda2p@chr15:101445820..101445832, -
4.1e-23FFCP PHASE1:Hg19::chr1:33608427..33608437,-#_2a2202f0fef3161932cd44fedecffda2p2@uc001bxa.1
4.1e-23FFCP PHASE2:Hg19::chr14:102704788..102704801,-#_2a2202f0fef3161932cd44fedecffda2p10@MOK
4.1e-23FFCP PHASE2:Hg19::chr1:33608427..33608437,-#_2a2202f0fef3161932cd44fedecffda2p2@uc001bxa.1
4.1e-23FFCP PHASE2:Hg19::chr15:101445820..101445832,-#_2a2202f0fef3161932cd44fedecffda2p@chr15:101445820..101445832, -
6.4e-23FFCP PHASE1:Hg19::chr11:119461966..119461970,+#_16db8ca752b3806807deffb92f4bfc0dp@chr11:119461966..119461970, +
6.4e-23FFCP PHASE2:Hg19::chr11:119461966..119461970,+#_16db8ca752b3806807deffb92f4bfc0dp@chr11:119461966..119461970, +
1.53e-21FFCP PHASE2:Hg19::chr12:52681676..52681679,-#_1d626dc7a0784f02285f046ee4dd19c4p6@KRT81
1.53e-21FFCP PHASE2:Hg19::chr2:126569768..126569794,+#_1d626dc7a0784f02285f046ee4dd19c4p@chr2:126569768..126569794, +
1.53e-21FFCP PHASE1:Hg19::chr12:52680234..52680245,-#_1d626dc7a0784f02285f046ee4dd19c4p@chr12:52680234..52680245, -
1.53e-21FFCP PHASE2:Hg19::chr1:20407255..20407264,+#_1d626dc7a0784f02285f046ee4dd19c4p@chr1:20407255..20407264, +
1.53e-21FFCP PHASE1:Hg19::chr12:52681676..52681679,-#_1d626dc7a0784f02285f046ee4dd19c4p6@KRT81
1.53e-21FFCP PHASE1:Hg19::chr1:20407255..20407264,+#_1d626dc7a0784f02285f046ee4dd19c4p@chr1:20407255..20407264, +
1.53e-21FFCP PHASE1:Hg19::chr2:126569768..126569794,+#_1d626dc7a0784f02285f046ee4dd19c4p@chr2:126569768..126569794, +
1.53e-21FFCP PHASE2:Hg19::chr12:52680234..52680245,-#_1d626dc7a0784f02285f046ee4dd19c4p@chr12:52680234..52680245, -
1.88e-21FFCP PHASE2:Hg19::chr3:111631881..111631893,+#_06f393da01312d3935739d434295b68bp@chr3:111631881..111631893, +
1.88e-21FFCP PHASE1:Hg19::chr3:111631881..111631893,+#_06f393da01312d3935739d434295b68bp@chr3:111631881..111631893, +
2.3e-21FFCP PHASE1:Hg19::chr11:329487..329504,-#_2db832abee4e6a61b93410f67acc4fbfp@chr11:329487..329504, -
2.3e-21FFCP PHASE2:Hg19::chr22:28329197..28329214,-#_2db832abee4e6a61b93410f67acc4fbfp@chr22:28329197..28329214, -
2.3e-21FFCP PHASE1:Hg19::chr22:28329197..28329214,-#_2db832abee4e6a61b93410f67acc4fbfp@chr22:28329197..28329214, -
2.3e-21FFCP PHASE2:Hg19::chr11:329487..329504,-#_2db832abee4e6a61b93410f67acc4fbfp@chr11:329487..329504, -