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DOID:4159

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Name:skin cancer
Namespace:FANTOM
Definition:"An organ system cancer located_in the skin that is the uncontrolled growth of abnormal skin cells." [url:http://www.ncbi.nlm.nih.gov/pubmedhealth/PMH0002414/]
Xrefs:
links:

MSH:D012878
NCI:C2920
SNOMEDCT_2010_1_31:188143008
SNOMEDCT_2010_1_31:190107001
SNOMEDCT_2010_1_31:363511009
SNOMEDCT_2010_1_31:372130007

UMLS_CUI:C0007114
Synonyms: "CA - skin cancer" EXACT [SNOMEDCT_2005_07_31:363511009]
"cancer of skin" RELATED []
"malignant neoplasm of skin" EXACT [MTH:NOCODE]
"malignant neoplasm of skin (disorder)" EXACT [SNOMEDCT_2005_07_31:372130007]
"malignant neoplasm of skin NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:188143008]
"malignant neoplasm of skin, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190107001]
"melanoma and Non-melanoma skin cancer" EXACT [NCI2004_11_17:C2920]
"skin cancer" EXACT [CSP2005:2020-0536]

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:0060122(integumentary system cancer)



Children


is a:DOID:3451 (skin carcinoma)


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:4159 (skin cancer), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr10:69686723..69686726,-#_c0c52e5ebb335896ee7f6bed5079758fp@chr10:69686723..69686726, -
1.55e-98FFCP PHASE1:Hg19::chr10:69686723..69686726,-#_c0c52e5ebb335896ee7f6bed5079758fp@chr10:69686723..69686726, -
4.52e-50FFCP PHASE2:Hg19::chr7:101448249..101448254,+#_929b5fb1f7f97697be90cf7fe8d2f1a7+, p@chr7:101448249..101448254
4.52e-50FFCP PHASE1:Hg19::chr8:123875147..123875159,+#_929b5fb1f7f97697be90cf7fe8d2f1a7p26@ZHX2
4.52e-50FFCP PHASE2:Hg19::chr1:153431372..153431378,-#_929b5fb1f7f97697be90cf7fe8d2f1a7p4@S100A7
4.52e-50FFCP PHASE1:Hg19::chr1:153431372..153431378,-#_929b5fb1f7f97697be90cf7fe8d2f1a7p4@S100A7
4.52e-50FFCP PHASE1:Hg19::chr7:101448249..101448254,+#_929b5fb1f7f97697be90cf7fe8d2f1a7p@chr7:101448249..101448254, +
4.52e-50FFCP PHASE2:Hg19::chr7:101448277..101448287,+#_929b5fb1f7f97697be90cf7fe8d2f1a7p@chr7:101448277..101448287, +
4.52e-50FFCP PHASE2:Hg19::chr7:101448101..101448113,+#_929b5fb1f7f97697be90cf7fe8d2f1a7p@chr7:101448101..101448113, +
4.52e-50FFCP PHASE1:Hg19::chr7:101448277..101448287,+#_929b5fb1f7f97697be90cf7fe8d2f1a7p@chr7:101448277..101448287, +
4.52e-50FFCP PHASE1:Hg19::chr18:22080172..22080183,+#_929b5fb1f7f97697be90cf7fe8d2f1a7p@chr18:22080172..22080183, +
4.52e-50FFCP PHASE2:Hg19::chr8:123875147..123875159,+#_929b5fb1f7f97697be90cf7fe8d2f1a7p26@ZHX2
4.52e-50FFCP PHASE1:Hg19::chr7:101448101..101448113,+#_929b5fb1f7f97697be90cf7fe8d2f1a7p@chr7:101448101..101448113, +
4.52e-50FFCP PHASE2:Hg19::chr7:101448176..101448184,+#_929b5fb1f7f97697be90cf7fe8d2f1a7p@chr7:101448176..101448184, +
4.52e-50FFCP PHASE1:Hg19::chr7:101448176..101448184,+#_929b5fb1f7f97697be90cf7fe8d2f1a7p@chr7:101448176..101448184, +
4.52e-50FFCP PHASE2:Hg19::chr18:22080172..22080183,+#_929b5fb1f7f97697be90cf7fe8d2f1a7p@chr18:22080172..22080183, +
3.61e-34FFCP PHASE2:Hg19::chr20:49047228..49047236,-#_ab3d32f2ac17d53a9a6f8032b509827dp@chr20:49047228..49047236, -
3.61e-34FFCP PHASE2:Hg19::chr9:97563078..97563086,+#_ab3d32f2ac17d53a9a6f8032b509827dp@chr9:97563078..97563086, +
3.61e-34FFCP PHASE1:Hg19::chr20:49047228..49047236,-#_ab3d32f2ac17d53a9a6f8032b509827dp@chr20:49047228..49047236, -
3.61e-34FFCP PHASE1:Hg19::chr9:97563078..97563086,+#_ab3d32f2ac17d53a9a6f8032b509827dp@chr9:97563078..97563086, +
5.04e-34FFCP PHASE2:Hg19::chr17:19648916..19648937,-#_c4ee370f8058ebe1cedca2eb8b439d96p10@ALDH3A1
5.04e-34FFCP PHASE2:Hg19::chr18:61254400..61254410,+#_c4ee370f8058ebe1cedca2eb8b439d96p8@SERPINB13
5.04e-34FFCP PHASE1:Hg19::chr21:37376927..37376938,+#_c4ee370f8058ebe1cedca2eb8b439d96p@chr21:37376927..37376938, +
5.04e-34FFCP PHASE1:Hg19::chr18:61254400..61254410,+#_c4ee370f8058ebe1cedca2eb8b439d96p8@SERPINB13
5.04e-34FFCP PHASE2:Hg19::chr3:81671636..81671662,-#_c4ee370f8058ebe1cedca2eb8b439d96p@chr3:81671636..81671662, -
5.04e-34FFCP PHASE1:Hg19::chr3:81671636..81671662,-#_c4ee370f8058ebe1cedca2eb8b439d96p@chr3:81671636..81671662, -
5.04e-34FFCP PHASE1:Hg19::chr1:76127067..76127073,-#_c4ee370f8058ebe1cedca2eb8b439d96-, p@chr1:76127067..76127073
5.04e-34FFCP PHASE1:Hg19::chr17:19648916..19648937,-#_c4ee370f8058ebe1cedca2eb8b439d96p10@ALDH3A1
5.04e-34FFCP PHASE2:Hg19::chr1:76127067..76127073,-#_c4ee370f8058ebe1cedca2eb8b439d96p@chr1:76127067..76127073, -
5.04e-34FFCP PHASE2:Hg19::chr21:37376927..37376938,+#_c4ee370f8058ebe1cedca2eb8b439d96p@chr21:37376927..37376938, +
7.05e-34FFCP PHASE2:Hg19::chr3:177508111..177508119,-#_190aa90d85b4608c6b3bbd23bb948d40p@chr3:177508111..177508119, -
7.05e-34FFCP PHASE2:Hg19::chr1:10980427..10980431,-#_190aa90d85b4608c6b3bbd23bb948d40-, p@chr1:10980427..10980431
7.05e-34FFCP PHASE1:Hg19::chr19:51517875..51517889,-#_190aa90d85b4608c6b3bbd23bb948d40p3@AK026045
7.05e-34FFCP PHASE1:Hg19::chr2:178179611..178179619,-#_190aa90d85b4608c6b3bbd23bb948d40p4@ENST00000443132
7.05e-34FFCP PHASE2:Hg19::chr17:48072063..48072074,-#_190aa90d85b4608c6b3bbd23bb948d40p5@DLX3
7.05e-34FFCP PHASE1:Hg19::chr17:48072063..48072074,-#_190aa90d85b4608c6b3bbd23bb948d40p5@DLX3
7.05e-34FFCP PHASE1:Hg19::chr13:28542963..28542973,-#_190aa90d85b4608c6b3bbd23bb948d40p1@CU677005
7.05e-34FFCP PHASE1:Hg19::chr3:193809263..193809278,+#_190aa90d85b4608c6b3bbd23bb948d40p1@ENST00000457815
7.05e-34FFCP PHASE2:Hg19::chr19:51517875..51517889,-#_190aa90d85b4608c6b3bbd23bb948d40p3@AK026045
7.05e-34FFCP PHASE1:Hg19::chr1:18085798..18085805,+#_190aa90d85b4608c6b3bbd23bb948d40p@chr1:18085798..18085805, +
7.05e-34FFCP PHASE2:Hg19::chr11:101454246..101454255,-#_190aa90d85b4608c6b3bbd23bb948d40p11@TRPC6
7.05e-34FFCP PHASE2:Hg19::chr13:28542963..28542973,-#_190aa90d85b4608c6b3bbd23bb948d40p1@CU677005
7.05e-34FFCP PHASE1:Hg19::chr11:101454246..101454255,-#_190aa90d85b4608c6b3bbd23bb948d40p11@TRPC6
7.05e-34FFCP PHASE1:Hg19::chr3:177508111..177508119,-#_190aa90d85b4608c6b3bbd23bb948d40p@chr3:177508111..177508119, -
7.05e-34FFCP PHASE1:Hg19::chr1:10980427..10980431,-#_190aa90d85b4608c6b3bbd23bb948d40p@chr1:10980427..10980431, -
7.05e-34FFCP PHASE2:Hg19::chr1:18085798..18085805,+#_190aa90d85b4608c6b3bbd23bb948d40p@chr1:18085798..18085805, +
7.05e-34FFCP PHASE2:Hg19::chr3:193809263..193809278,+#_190aa90d85b4608c6b3bbd23bb948d40p1@ENST00000457815
7.05e-34FFCP PHASE2:Hg19::chr2:178179611..178179619,-#_190aa90d85b4608c6b3bbd23bb948d40p4@ENST00000443132
4.32e-26FFCP PHASE2:Hg19::chr16:55600644..55600645,+#_142c976f3c6c0d873a9f3c1151e1abafp2@CAPNS2
4.32e-26FFCP PHASE1:Hg19::chr5:1884077..1884085,+#_142c976f3c6c0d873a9f3c1151e1abafp1@ENST00000506335
4.32e-26FFCP PHASE1:Hg19::chr16:55600644..55600645,+#_142c976f3c6c0d873a9f3c1151e1abafp2@CAPNS2
4.32e-26FFCP PHASE2:Hg19::chr1:151826151..151826159,-#_142c976f3c6c0d873a9f3c1151e1abafp3@THEM5
4.32e-26FFCP PHASE1:Hg19::chr4:73248974..73249005,+#_142c976f3c6c0d873a9f3c1151e1abafp@chr4:73248974..73249005, +
4.32e-26FFCP PHASE2:Hg19::chr5:1884077..1884085,+#_142c976f3c6c0d873a9f3c1151e1abafp1@ENST00000506335
4.32e-26FFCP PHASE2:Hg19::chr4:73248974..73249005,+#_142c976f3c6c0d873a9f3c1151e1abafp@chr4:73248974..73249005, +
4.32e-26FFCP PHASE1:Hg19::chr1:151826151..151826159,-#_142c976f3c6c0d873a9f3c1151e1abafp3@THEM5
5.56e-26FFCP PHASE1:Hg19::chr8:120233966..120233975,+#_ef8ed1bfde28b412b75d1e71803637dcp@chr8:120233966..120233975, +
5.56e-26FFCP PHASE1:Hg19::chr17:77774350..77774360,+#_ef8ed1bfde28b412b75d1e71803637dcp@chr17:77774350..77774360, +
5.56e-26FFCP PHASE2:Hg19::chr1:86921028..86921032,+#_ef8ed1bfde28b412b75d1e71803637dcp@chr1:86921028..86921032, +
5.56e-26FFCP PHASE2:Hg19::chr3:50367252..50367278,-#_ef8ed1bfde28b412b75d1e71803637dcp@chr3:50367252..50367278, -
5.56e-26FFCP PHASE1:Hg19::chr3:50367252..50367278,-#_ef8ed1bfde28b412b75d1e71803637dc-, p@chr3:50367252..50367278
5.56e-26FFCP PHASE2:Hg19::chr16:66906996..66906997,-#_ef8ed1bfde28b412b75d1e71803637dcp@chr16:66906996..66906997, -
5.56e-26FFCP PHASE2:Hg19::chr8:123875131..123875140,+#_ef8ed1bfde28b412b75d1e71803637dcp25@ZHX2
5.56e-26FFCP PHASE1:Hg19::chr12:130647145..130647153,+#_ef8ed1bfde28b412b75d1e71803637dcp3@FZD10
5.56e-26FFCP PHASE1:Hg19::chr16:66906996..66906997,-#_ef8ed1bfde28b412b75d1e71803637dcp@chr16:66906996..66906997, -
5.56e-26FFCP PHASE2:Hg19::chr8:120233966..120233975,+#_ef8ed1bfde28b412b75d1e71803637dc+, p@chr8:120233966..120233975
5.56e-26FFCP PHASE1:Hg19::chr6:152792772..152792787,-#_ef8ed1bfde28b412b75d1e71803637dcp@chr6:152792772..152792787, -
5.56e-26FFCP PHASE2:Hg19::chr12:130647145..130647153,+#_ef8ed1bfde28b412b75d1e71803637dcp3@FZD10
5.56e-26FFCP PHASE1:Hg19::chr1:86921028..86921032,+#_ef8ed1bfde28b412b75d1e71803637dcp@chr1:86921028..86921032, +
5.56e-26FFCP PHASE2:Hg19::chr7:101448204..101448229,+#_ef8ed1bfde28b412b75d1e71803637dcp@chr7:101448204..101448229, +
5.56e-26FFCP PHASE1:Hg19::chr8:123875131..123875140,+#_ef8ed1bfde28b412b75d1e71803637dcp25@ZHX2
5.56e-26FFCP PHASE2:Hg19::chr17:77774350..77774360,+#_ef8ed1bfde28b412b75d1e71803637dcp@chr17:77774350..77774360, +
5.56e-26FFCP PHASE2:Hg19::chr6:152792772..152792787,-#_ef8ed1bfde28b412b75d1e71803637dcp@chr6:152792772..152792787, -
5.56e-26FFCP PHASE1:Hg19::chr7:101448204..101448229,+#_ef8ed1bfde28b412b75d1e71803637dcp@chr7:101448204..101448229, +
7.14e-26FFCP PHASE2:Hg19::chr2:234526341..234526346,+#_6e2858db9e367b309f23bb3e7167514dp1@UGT1A8
7.14e-26FFCP PHASE1:Hg19::chr2:234526341..234526346,+#_6e2858db9e367b309f23bb3e7167514dp1@UGT1A8
9.18e-26FFCP PHASE1:Hg19::chr14:65406349..65406358,+#_4b01a0628f6f445894e8e097dbee7da4p@chr14:65406349..65406358, +
9.18e-26FFCP PHASE1:Hg19::chr4:152117165..152117168,+#_4b01a0628f6f445894e8e097dbee7da4p@chr4:152117165..152117168, +
9.18e-26FFCP PHASE2:Hg19::chr3:136885144..136885147,+#_4b01a0628f6f445894e8e097dbee7da4p@chr3:136885144..136885147, +
9.18e-26FFCP PHASE1:Hg19::chr5:14437967..14437970,+#_4b01a0628f6f445894e8e097dbee7da4p@chr5:14437967..14437970, +
9.18e-26FFCP PHASE2:Hg19::chr10:127591699..127591713,-#_4b01a0628f6f445894e8e097dbee7da4p@chr10:127591699..127591713, -
9.18e-26FFCP PHASE1:Hg19::chr1:118570948..118570964,-#_4b01a0628f6f445894e8e097dbee7da4p@chr1:118570948..118570964, -
9.18e-26FFCP PHASE1:Hg19::chr10:54259346..54259353,+#_4b01a0628f6f445894e8e097dbee7da4p@chr10:54259346..54259353, +
9.18e-26FFCP PHASE2:Hg19::chr10:92754303..92754313,+#_4b01a0628f6f445894e8e097dbee7da4p2@ENST00000412362
9.18e-26FFCP PHASE1:Hg19::chr10:127591699..127591713,-#_4b01a0628f6f445894e8e097dbee7da4-, p@chr10:127591699..127591713
9.18e-26FFCP PHASE1:Hg19::chr10:92754303..92754313,+#_4b01a0628f6f445894e8e097dbee7da4p2@ENST00000412362
9.18e-26FFCP PHASE2:Hg19::chr10:54259346..54259353,+#_4b01a0628f6f445894e8e097dbee7da4p@chr10:54259346..54259353, +
9.18e-26FFCP PHASE2:Hg19::chr5:14437967..14437970,+#_4b01a0628f6f445894e8e097dbee7da4p@chr5:14437967..14437970, +
9.18e-26FFCP PHASE2:Hg19::chr1:118570948..118570964,-#_4b01a0628f6f445894e8e097dbee7da4p@chr1:118570948..118570964, -
9.18e-26FFCP PHASE2:Hg19::chr1:153430422..153430443,-#_4b01a0628f6f445894e8e097dbee7da4p3@S100A7
9.18e-26FFCP PHASE1:Hg19::chr3:136885144..136885147,+#_4b01a0628f6f445894e8e097dbee7da4p@chr3:136885144..136885147, +
9.18e-26FFCP PHASE2:Hg19::chr14:65406349..65406358,+#_4b01a0628f6f445894e8e097dbee7da4p@chr14:65406349..65406358, +
9.18e-26FFCP PHASE1:Hg19::chr1:153430422..153430443,-#_4b01a0628f6f445894e8e097dbee7da4p3@S100A7
9.18e-26FFCP PHASE2:Hg19::chr4:152117165..152117168,+#_4b01a0628f6f445894e8e097dbee7da4p@chr4:152117165..152117168, +
3.11e-21FFCP PHASE1:Hg19::chr6:132455433..132455444,+#_1bf8a7ea60ca2e8d5c63083e7ccc8b12p4@ENST00000443303
3.11e-21FFCP PHASE2:Hg19::chr10:5567644..5567657,+#_1bf8a7ea60ca2e8d5c63083e7ccc8b12p@chr10:5567644..5567657, +
3.11e-21FFCP PHASE2:Hg19::chr5:11385573..11385583,-#_1bf8a7ea60ca2e8d5c63083e7ccc8b12p47@CTNND2
3.11e-21FFCP PHASE2:Hg19::chr4:75180763..75180777,+#_1bf8a7ea60ca2e8d5c63083e7ccc8b12p@chr4:75180763..75180777, +
3.11e-21FFCP PHASE2:Hg19::chr1:152572708..152572714,+#_1bf8a7ea60ca2e8d5c63083e7ccc8b12p1@LCE3C
3.11e-21FFCP PHASE1:Hg19::chr1:152572708..152572714,+#_1bf8a7ea60ca2e8d5c63083e7ccc8b12p1@LCE3C