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DOID:5861

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Name:myxoid chondrosarcoma
Namespace:FANTOM
Xrefs:
links:

NCI:C4303
SNOMEDCT_2010_1_31:189881008
SNOMEDCT_2010_1_31:75622000

UMLS_CUI:C0334551
Synonyms: " Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189881008]
"Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:75622000]

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:3371(chondrosarcoma)



Children


is a:DOID:6496 (extraskeletal myxoid chondrosarcoma)


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

  • 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)

Mouse (Mus musculus)

  • 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5861 (myxoid chondrosarcoma), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr5:128083931..128083952,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr5:128083931..128083952, +
5.42e-195FFCP PHASE1:Hg19::chr3:127441545..127441550,-#_6ef67aad4781bdf0faef4ef7a3601b2fp58@MGLL
5.42e-195FFCP PHASE2:Hg19::chr14:88322648..88322655,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr14:88322648..88322655, -
5.42e-195FFCP PHASE2:Hg19::chr18:74535969..74535980,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr18:74535969..74535980, -
5.42e-195FFCP PHASE2:Hg19::chr15:96181421..96181428,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr15:96181421..96181428, -
5.42e-195FFCP PHASE2:Hg19::chr1:145473297..145473306,+#_6ef67aad4781bdf0faef4ef7a3601b2fp7@AB464458
5.42e-195FFCP PHASE1:Hg19::chr10:63700076..63700086,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr10:63700076..63700086, +
5.42e-195FFCP PHASE2:Hg19::chr3:2141982..2141990,+#_6ef67aad4781bdf0faef4ef7a3601b2fp16@CNTN4
5.42e-195FFCP PHASE2:Hg19::chr12:71031372..71031377,-#_6ef67aad4781bdf0faef4ef7a3601b2fp25@PTPRB
5.42e-195FFCP PHASE1:Hg19::chr12:80818234..80818245,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:80818234..80818245, +
5.42e-195FFCP PHASE1:Hg19::chr6:142987388..142987398,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:142987388..142987398, -
5.42e-195FFCP PHASE1:Hg19::chr8:107074457..107074458,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr8:107074457..107074458, +
5.42e-195FFCP PHASE2:Hg19::chr3:2141759..2141771,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141759..2141771, -
5.42e-195FFCP PHASE1:Hg19::chr12:71031325..71031332,-#_6ef67aad4781bdf0faef4ef7a3601b2fp19@PTPRB
5.42e-195FFCP PHASE1:Hg19::chr3:2141993..2142006,+#_6ef67aad4781bdf0faef4ef7a3601b2fp6@CNTN4
5.42e-195FFCP PHASE2:Hg19::chrX:135338397..135338402,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chrX:135338397..135338402, -
5.42e-195FFCP PHASE1:Hg19::chr14:88322648..88322655,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr14:88322648..88322655, -
5.42e-195FFCP PHASE1:Hg19::chr3:157230582..157230593,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:157230582..157230593, +
5.42e-195FFCP PHASE2:Hg19::chr3:2140207..2140208,+#_6ef67aad4781bdf0faef4ef7a3601b2fp34@CNTN4
5.42e-195FFCP PHASE2:Hg19::chr6:96913362..96913393,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:96913362..96913393, -
5.42e-195FFCP PHASE1:Hg19::chr5:33361438..33361453,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr5:33361438..33361453, -
5.42e-195FFCP PHASE1:Hg19::chr7:18439510..18439521,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr7:18439510..18439521, +
5.42e-195FFCP PHASE2:Hg19::chr6:152589291..152589303,-#_6ef67aad4781bdf0faef4ef7a3601b2fp38@SYNE1
5.42e-195FFCP PHASE2:Hg19::chr11:30252646..30252648,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr11:30252646..30252648, +
5.42e-195FFCP PHASE1:Hg19::chr3:2140234..2140235,+#_6ef67aad4781bdf0faef4ef7a3601b2fp36@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr3:2141775..2141783,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141775..2141783, -
5.42e-195FFCP PHASE2:Hg19::chr13:23027835..23027846,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23027835..23027846, +
5.42e-195FFCP PHASE1:Hg19::chr1:154942216..154942223,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:154942216..154942223, -
5.42e-195FFCP PHASE1:Hg19::chr9:13005000..13005036,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr9:13005000..13005036, -
5.42e-195FFCP PHASE2:Hg19::chr1:192444852..192444861,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:192444852..192444861, +
5.42e-195FFCP PHASE1:Hg19::chr2:188420470..188420480,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr2:188420470..188420480, +
5.42e-195FFCP PHASE1:Hg19::chr1:145471703..145471706,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:145471703..145471706, +
5.42e-195FFCP PHASE1:Hg19::chr7:79999046..79999051,+#_6ef67aad4781bdf0faef4ef7a3601b2fp41@CD36
5.42e-195FFCP PHASE1:Hg19::chr6:152590257..152590288,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:152590257..152590288, -
5.42e-195FFCP PHASE2:Hg19::chr14:88220703..88220709,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr14:88220703..88220709, -
5.42e-195FFCP PHASE2:Hg19::chr12:80818234..80818245,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:80818234..80818245, +
5.42e-195FFCP PHASE2:Hg19::chr6:142987388..142987398,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:142987388..142987398, -
5.42e-195FFCP PHASE2:Hg19::chr1:145471703..145471706,+#_6ef67aad4781bdf0faef4ef7a3601b2f+, p@chr1:145471703..145471706
5.42e-195FFCP PHASE2:Hg19::chr5:39548606..39548614,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr5:39548606..39548614, -
5.42e-195FFCP PHASE1:Hg19::chr3:177555440..177555446,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:177555440..177555446, -
5.42e-195FFCP PHASE2:Hg19::chr4:72885984..72885997,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:72885984..72885997, -
5.42e-195FFCP PHASE1:Hg19::chr1:197889977..197890013,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:197889977..197890013, +
5.42e-195FFCP PHASE2:Hg19::chr3:2141851..2141858,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141851..2141858, -
5.42e-195FFCP PHASE2:Hg19::chr1:228783266..228783269,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:228783266..228783269, -
5.42e-195FFCP PHASE2:Hg19::chr19:56047661..56047668,-#_6ef67aad4781bdf0faef4ef7a3601b2fp4@SBK2
5.42e-195FFCP PHASE2:Hg19::chr4:169935485..169935488,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:169935485..169935488, -
5.42e-195FFCP PHASE1:Hg19::chr11:30257128..30257133,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr11:30257128..30257133, -
5.42e-195FFCP PHASE2:Hg19::chr13:23733607..23733611,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23733607..23733611, -
5.42e-195FFCP PHASE1:Hg19::chr18:74535969..74535980,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr18:74535969..74535980, -
5.42e-195FFCP PHASE1:Hg19::chr2:175614951..175614956,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr2:175614951..175614956, -
5.42e-195FFCP PHASE1:Hg19::chrX:135338397..135338402,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chrX:135338397..135338402, -
5.42e-195FFCP PHASE1:Hg19::chr12:108955070..108955084,-#_6ef67aad4781bdf0faef4ef7a3601b2fp16@SART3
5.42e-195FFCP PHASE2:Hg19::chr1:154942216..154942223,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:154942216..154942223, -
5.42e-195FFCP PHASE1:Hg19::chr3:99680705..99680734,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:99680705..99680734, +
5.42e-195FFCP PHASE2:Hg19::chr10:63700043..63700053,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr10:63700043..63700053, +
5.42e-195FFCP PHASE1:Hg19::chr3:1577559..1577577,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:1577559..1577577, -
5.42e-195FFCP PHASE1:Hg19::chr6:96913362..96913393,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:96913362..96913393, -
5.42e-195FFCP PHASE1:Hg19::chr10:33244066..33244083,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr10:33244066..33244083, -
5.42e-195FFCP PHASE2:Hg19::chr3:1577628..1577634,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:1577628..1577634, -
5.42e-195FFCP PHASE1:Hg19::chr2:206927691..206927699,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr2:206927691..206927699, -
5.42e-195FFCP PHASE2:Hg19::chr6:152589452..152589462,-#_6ef67aad4781bdf0faef4ef7a3601b2fp43@SYNE1
5.42e-195FFCP PHASE1:Hg19::chr18:22251681..22251685,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr18:22251681..22251685, -
5.42e-195FFCP PHASE1:Hg19::chr4:169935479..169935481,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:169935479..169935481, -
5.42e-195FFCP PHASE2:Hg19::chr18:22251681..22251685,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr18:22251681..22251685, -
5.42e-195FFCP PHASE1:Hg19::chr3:2141862..2141887,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141862..2141887, -
5.42e-195FFCP PHASE2:Hg19::chr13:23169005..23169009,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23169005..23169009, +
5.42e-195FFCP PHASE2:Hg19::chr12:79920595..79920605,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:79920595..79920605, -
5.42e-195FFCP PHASE2:Hg19::chr4:145101707..145101712,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:145101707..145101712, +
5.42e-195FFCP PHASE1:Hg19::chr14:88220703..88220709,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr14:88220703..88220709, -
5.42e-195FFCP PHASE2:Hg19::chr12:95941674..95941679,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:95941674..95941679, +
5.42e-195FFCP PHASE1:Hg19::chr1:192407901..192407907,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:192407901..192407907, -
5.42e-195FFCP PHASE1:Hg19::chr13:23368370..23368374,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23368370..23368374, +
5.42e-195FFCP PHASE2:Hg19::chr3:157221979..157222025,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:157221979..157222025, -
5.42e-195FFCP PHASE2:Hg19::chr6:150735340..150735361,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:150735340..150735361, +
5.42e-195FFCP PHASE1:Hg19::chr2:190023542..190023552,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr2:190023542..190023552, -
5.42e-195FFCP PHASE2:Hg19::chr11:30105969..30105977,-#_6ef67aad4781bdf0faef4ef7a3601b2fp1@ENST00000527819
5.42e-195FFCP PHASE1:Hg19::chr3:2139856..2139863,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2139856..2139863, +
5.42e-195FFCP PHASE2:Hg19::chr3:99680705..99680734,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:99680705..99680734, +
5.42e-195FFCP PHASE1:Hg19::chr1:228806586..228806591,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:228806586..228806591, +
5.42e-195FFCP PHASE2:Hg19::chr2:175629357..175629367,-#_6ef67aad4781bdf0faef4ef7a3601b2fp6@CHRNA1
5.42e-195FFCP PHASE1:Hg19::chr12:70351971..70351975,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:70351971..70351975, +
5.42e-195FFCP PHASE2:Hg19::chr1:192407879..192407891,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:192407879..192407891, -
5.42e-195FFCP PHASE2:Hg19::chr3:127441545..127441550,-#_6ef67aad4781bdf0faef4ef7a3601b2fp58@MGLL
5.42e-195FFCP PHASE2:Hg19::chrX:135338270..135338275,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chrX:135338270..135338275, -
5.42e-195FFCP PHASE1:Hg19::chr3:30442082..30442087,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:30442082..30442087, -
5.42e-195FFCP PHASE2:Hg19::chr13:23734279..23734283,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23734279..23734283, +
5.42e-195FFCP PHASE2:Hg19::chr14:88338702..88338713,-#_6ef67aad4781bdf0faef4ef7a3601b2fp1@ENST00000554305
5.42e-195FFCP PHASE2:Hg19::chr15:96181433..96181441,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr15:96181433..96181441, -
5.42e-195FFCP PHASE2:Hg19::chr9:79634044..79634053,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr9:79634044..79634053, -
5.42e-195FFCP PHASE1:Hg19::chr15:95751475..95751482,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr15:95751475..95751482, +
5.42e-195FFCP PHASE1:Hg19::chr12:46660412..46660420,-#_6ef67aad4781bdf0faef4ef7a3601b2fp38@SLC38A1
5.42e-195FFCP PHASE2:Hg19::chr3:2141993..2142006,+#_6ef67aad4781bdf0faef4ef7a3601b2fp6@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr1:113250450..113250457,-#_6ef67aad4781bdf0faef4ef7a3601b2fp18@RHOC
5.42e-195FFCP PHASE1:Hg19::chr12:80818259..80818266,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:80818259..80818266, +
5.42e-195FFCP PHASE1:Hg19::chr6:142993137..142993142,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:142993137..142993142, +
5.42e-195FFCP PHASE2:Hg19::chr4:139817573..139817580,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:139817573..139817580, -
5.42e-195FFCP PHASE1:Hg19::chr6:152589396..152589401,-#_6ef67aad4781bdf0faef4ef7a3601b2fp68@SYNE1
5.42e-195FFCP PHASE2:Hg19::chr5:33361438..33361453,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr5:33361438..33361453, -
5.42e-195FFCP PHASE1:Hg19::chr3:163194047..163194081,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:163194047..163194081, -
5.42e-195FFCP PHASE1:Hg19::chr1:197886803..197886812,+#_6ef67aad4781bdf0faef4ef7a3601b2fp7@LHX9