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EFO:0000369

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Name:compound based treatment
Namespace:FANTOM
Definition:{{{def}}}
Xrefs:
links:
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Synonyms: {{{synonym}}}
Comments:{{{comment}}}
Alt_id: {{{alt_id}}}
Subset: {{{subset}}}
Created by:{{{created_by}}}
Creation date:{{{obo_creation_date}}}
Has quality:{{{has_quality}}}


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:EFO:0000727(treatment)
disjoint_from:[[{{{disjoint_from}}}]]()
union_of:[[{{{union_of}}}]]()
derives_from:[[{{{derives_from}}}]]()
develops_from:[[{{{develops_from}}}]]()
has_quality:[[{{{has_quality}}}]]()
located_in:[[{{{located_in}}}]]()
part_of:[[{{{part_of}}}]]()



Children


is a:FF:0000329 (adipogenic induction sample),FF:0000330 (EGF1 treatment sample),FF:0000331 (HRG treatment sample),FF:0000332 (calcification induced with ascorbate and BPG sample),FF:0000333 (medium change sample),FF:0000334 (melanocytic induction sample),FF:0000335 (LPS treatment sample),FF:0000336 (osteogenic induction sample),FF:0000337 (erythropoietin treatment sample),FF:0000338 (hemin treatment sample),FF:0000339 (FGF2 treatment sample),FF:0000340 (IL1-beta treatment sample),FF:0000341 (Vegfc treatment sample),FF:0000342 (T-cell induction sample),FF:0000409 (T cell expansion sample),FF:0000627 (RANK ligand treatment sample),FF:0000629 (IFN and N-hexane treatment sample),FF:0000630 (beta-glucan treatment sample),FF:0000631 (trehalose dimycolate (TDM) treatment sample),FF:0000636 (IL-2 treatment sample),FF:0000637 (IL-33 treatment sample),FF:0000644 (trophoblast cell line differentiation sample),FF:0000645 (tracheal ciliated cell differentiation sample),FF:0000651 (cardiomyocyte differentiation treatment sample),FF:11844-124H8 ()

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with EFO:0000369 (compound based treatment), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


No analysis results for this cluster








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