Personal tools

EFO:0001746

From FANTOM5_SSTAR

Jump to: navigation, search
Name:development or differentiation design
Namespace:FANTOM
Definition:{{{def}}}
Xrefs:
links:
{{{xref}}}:[1]
Synonyms: {{{synonym}}}
Comments:{{{comment}}}
Alt_id: {{{alt_id}}}
Subset: {{{subset}}}
Created by:{{{created_by}}}
Creation date:{{{obo_creation_date}}}
Has quality:{{{has_quality}}}


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:EFO:0004667(biological variation design)
disjoint_from:[[{{{disjoint_from}}}]]()
union_of:[[{{{union_of}}}]]()
derives_from:[[{{{derives_from}}}]]()
develops_from:[[{{{develops_from}}}]]()
has_quality:[[{{{has_quality}}}]]()
located_in:[[{{{located_in}}}]]()
part_of:[[{{{part_of}}}]]()



Children


is a:FF:0000410 (human Lymphatic Endothelial cells 0min after VEGFC treatment sample),FF:0000411 (human Lymphatic Endothelial cells 15min after VEGFC treatment sample),FF:0000412 (human Lymphatic Endothelial cells 30min after VEGFC treatment sample),FF:0000413 (human Lymphatic Endothelial cells 45min after VEGFC treatment sample),FF:0000414 (human Lymphatic Endothelial cells 1hr after VEGFC treatment sample),FF:0000415 (human Lymphatic Endothelial cells 80min after VEGFC treatment sample),FF:0000416 (human Lymphatic Endothelial cells 100min after VEGFC treatment sample),FF:0000417 (human Lymphatic Endothelial cells 2h after VEGFC treatment sample),FF:0000418 (human Lymphatic Endothelial cells 2.5h after VEGFC treatment sample),FF:0000419 (human Lymphatic Endothelial cells 3h after VEGFC treatment sample),FF:0000420 (human Lymphatic Endothelial cells 3.5h after VEGFC treatment sample),FF:0000421 (human Lymphatic Endothelial cells 4h after VEGFC treatment sample),FF:0000422 (human Lymphatic Endothelial cells 5h after VEGFC treatment sample),FF:0000423 (human Lymphatic Endothelial cells 6h after VEGFC treatment sample),FF:0000424 (human Lymphatic Endothelial cells 7h after VEGFC treatment sample),FF:0000425 (human Lymphatic Endothelial cells 8h after VEGFC treatment sample),FF:0000426 (human MCF7 breast cancer cell line 0min after EGF1 treatment sample),FF:0000427 (human MCF7 breast cancer cell line 15min after EGF1 treatment sample),FF:0000428 (human MCF7 breast cancer cell line 30min after EGF1 treatment sample),FF:0000429 (human MCF7 breast cancer cell line 45min after EGF1 treatment sample),FF:0000430 (human MCF7 breast cancer cell line 1hr after EGF1 treatment sample),FF:0000431 (human MCF7 breast cancer cell line 80min after EGF1 treatment sample),FF:0000432 (human MCF7 breast cancer cell line 100min after EGF1 treatment sample),FF:0000433 (human MCF7 breast cancer cell line 2h after EGF1 treatment sample),FF:0000434 (human MCF7 breast cancer cell line 2.5h after EGF1 treatment sample),FF:0000435 (human MCF7 breast cancer cell line 3h after EGF1 treatment sample),FF:0000436 (human MCF7 breast cancer cell line 3.5h after EGF1 treatment sample),FF:0000437 (human MCF7 breast cancer cell line 4h after EGF1 treatment sample),FF:0000438 (human MCF7 breast cancer cell line 5h after EGF1 treatment sample),FF:0000439 (human MCF7 breast cancer cell line 6h after EGF1 treatment sample),FF:0000440 (human MCF7 breast cancer cell line 7h after EGF1 treatment sample),FF:0000441 (human MCF7 breast cancer cell line 8h after EGF1 treatment sample),FF:0000442 (MCF7 breast cancer cell line 0min after HRG treatment),FF:0000443 (human MCF7 breast cancer cell line 15min after HRG treatment sample),FF:0000444 (human MCF7 breast cancer cell line 30min after HRG treatment sample),FF:0000445 (human MCF7 breast cancer cell line 45min after HRG treatment sample),FF:0000446 (human MCF7 breast cancer cell line 1hr after HRG treatment sample),FF:0000447 (human MCF7 breast cancer cell line 80min after HRG treatment sample),FF:0000448 (human MCF7 breast cancer cell line 100min after HRG treatment sample),FF:0000449 (human MCF7 breast cancer cell line 2h after HRG treatment sample),FF:0000450 (human MCF7 breast cancer cell line 2.5h after HRG treatment sample),FF:0000451 (human MCF7 breast cancer cell line 3h after HRG treatment sample),FF:0000452 (human MCF7 breast cancer cell line 3.5h after HRG treatment sample),FF:0000453 (human MCF7 breast cancer cell line 4h after HRG treatment sample),FF:0000454 (human MCF7 breast cancer cell line 5h after HRG treatment sample),FF:0000455 (human MCF7 breast cancer cell line 6h after HRG treatment sample),FF:0000456 (human MCF7 breast cancer cell line 7h after HRG treatment sample),FF:0000457 (human MCF7 breast cancer cell line 8h after HRG treatment sample),FF:0000458 (mouse ST2 Mesenchymal stem cells, cells 15 min after adipogenic induction sample),FF:0000459 (mouse ST2 Mesenchymal stem cells, cells 30 min after adipogenic induction sample)... further results

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with EFO:0001746 (development or differentiation design), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


No analysis results for this cluster








"{{{obo_creation_date}}}" contains an extrinsic dash or other characters that are invalid for a date interpretation.