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NonredundantMotifs:108

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant108
  • db :SWISSREGULON
  • Id :SPZ1.p2
  • name :SPZ1
  • score :1.2928700741270822
  • External refs:
EntrezGene:84654
UniProt:84654

  • Internal refs:
EntrezGene:84654


Motif matrix
POACGT
1188.22551512.151657118.5478592.806698
23.78142929.145229283.0802835.724788
337.2863080.52327283.2687870.653364
46.345350309.0267236.359656
529.7190833.22488247.097617211.69015
6202.34651717.19081216.99950585.194895
7169.314496.106235105.61113940.699865
818.642629234.40199562.3660266.321079
9242.2908060.48202374.2215754.737325
108.9443998.476722297.3152976.995311
1140.341355232.41570440.8250358.149635

Sub Motif Members