NonredundantMotifs:132

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant132
• db :UNIPROBE
• Id :Sox7_secondary
• name :SCI09
• score :0.014619052679451527
  
• External refs:

EntrezGene:83595
UniProt:83595

• Internal refs:

EntrezGene:83595

Motif matrix

P0 A C G T 1 0.0676269210513709 0.131333414287503 0.654425150048183 0.146614514612943 2 0.15648759920183 0.114442160741864 0.145629592465618 0.583440647590689 3 0.206450329514005 0.265630015355441 0.358016992710076 0.169902662420478 4 0.0907285103483786 0.460712807069886 0.274711812269516 0.17384687031222 5 0.28599401815575 0.0999978882546272 0.154485496977574 0.459522596612049 6 0.635908339245877 0.184787315702642 0.0729816662280879 0.106322678823392 7 0.748421256985201 0.0392040980373876 0.0926052017983512 0.11976944317906 8 0.0813417063769118 0.0613271017618581 0.0445319765801643 0.812799215281066 9 0.143119840259339 0.0438789865774616 0.0242159475130884 0.788785225650111 10 0.247544443947249 0.0921017083862118 0.621452708475432 0.0389011391911066 11 0.295530617321157 0.036295065214235 0.0275944705353764 0.640579846929231 12 0.194561015194024 0.305467930984036 0.339915636269032 0.160055417552909 13 0.175037547221976 0.193568467786928 0.101212203672109 0.530181781318986 14 0.145226405115317 0.167487734452512 0.559871276443215 0.127414583988956 15 0.271500686925427 0.237429459151282 0.206700516983896 0.284369336939395 16 0.216834319626577 0.109190889923394 0.569605260587763 0.104369529862266 17 0.182623511460473 0.177160141623249 0.300474621817619 0.339741725098659 18 0.331736767340599 0.198644640892045 0.265136944969055 0.2044816467983 19 0.230155319980942 0.35936513571497 0.183450096231086 0.227029448073003 20 0.0565808854176241 0.0672973974209182 0.463051902055891 0.413069815105566 21 0.198890799582758 0.324626079092249 0.304423628683607 0.172059492641387 22 0.181967957034691 0.287547460697744 0.20241869798341 0.328065884284155