Personal tools

NonredundantMotifs:152

From FANTOM5_SSTAR

Jump to: navigation, search

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant152
  • db :HOCOMOCO
  • Id :ZBTB4!METH_f1
  • name  :
  • score :1.4482110863766893
  • External refs:
EntrezGene:57659
UniProt:57659

  • Internal refs:
EntrezGene:57659


Motif matrix
P0ACGT
10.82421793528619225.4062565177104965.7695255470033280.0
218.812513035420964.9453076117171525.7695255470033282.472653805858573
327.8789103235690552.4726538058585731.64843587057238070.0
42.4726538058585730.8242179352861928.2812513035420820.421876955313152
520.4218769553131520.011.5781230446868480.0
66.0703128258855360.025.9296871741144950.0
70.021.468738268121150.010.531261731878848
80.00.032.00.0
912.1796976024512310.012.4023409799730567.417961417575712
100.00.8242179352861927.15624608937372824.019535975340094
116.0146519815050563.50292622496630412.6474674144747849.834954379053825
120.8242179352861920.026.492189781198694.683592283515136
130.010.5312617318788485.76952554700332815.699212721117824
142.77344108474075850.82421793528619228.4023409799730540.0
158.6933602711851854.53319864407404814.240242440666724.533198644074048

Sub Motif Members