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NonredundantMotifs:181

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Representative Motif


Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon
May 2013, Collection Name: Non-redundant known motifs
Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.
207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name  :non-redundant181
  • db  :HOCOMOCO
  • Id  :PAX5_si
  • name  :
  • score  :0.08069853189154862
  • External refs:
EntrezGene:5079
UniProt:5079

  • Internal refs:
EntrezGene:5079


Motif matrix
P0ACGT
1781.8983577537862327.14432831807032020.5910821594826.15362920358769
2511.92521729774467631.88902115243722011.97315898474180.0
321.985112675819322958.44790254303120.84546566176121154.5089165543022
40.00.0130.777424687462853025.0099727474526
50.00.03155.78739743491270.0
63143.233943897267612.5534535376451740.00.0
7597.14659559077334.672199637493342523.9686022066580.0
8426.92093016114967783.21934582496741369.0378866060819576.6092348427194

Sub Motif Members