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NonredundantMotifs:21

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Representative Motif


Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon
May 2013, Collection Name: Non-redundant known motifs
Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.
207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name  :non-redundant21
  • db  :HOCOMOCO
  • Id  :E2F6_f1
  • name  :
  • score  :4.311809455108847
  • External refs:
EntrezGene:1876
UniProt:1876

  • Internal refs:
EntrezGene:1876


Motif matrix
P0ACGT
1412.42094645162337313.572548752632552.5283038649173585.4530962704173
2376.13240900122037119.75790134565906858.4765685302847509.6080164624256
3275.34930148375724219.9809612840911341.106838543700227.53779402804133
447.3717517558874652.644472428924811752.340865978399311.617805176378402
5215.98107601794161598.66190103915124.1621717805266945.169746501969726
6107.8823469993856653.936400366917041657.43189386372844.72425410955855
715.996358976076202120.925727831479581712.03016864222715.02263988980619
819.16571913922964418.0488060696845451807.473731627790619.28663850288406
91506.3703354709955.874135402792257348.0041988121343.7262256536672367
101086.34737955172997.17461913893277669.143754058720311.30914259020784
11484.1865887805356318.3870486791885967.68556895915393.71568892071214
12347.27723032704864415.1352679568138900.8457996548988200.71659740082683

Sub Motif Members