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NonredundantMotifs:33

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Representative Motif


Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon
May 2013, Collection Name: Non-redundant known motifs
Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.
207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name  :non-redundant33
  • db  :HOCOMOCO
  • Id  :KLF4_f2
  • name  :
  • score  :2.54212838334891
  • External refs:
EntrezGene:9314
UniProt:9314

  • Internal refs:
EntrezGene:9314


Motif matrix
P0ACGT
11233.4608840535493.181732778116731036.60148570928851258.2948629970272
2263.9792423431855.3145205558721393347.59499715252744.650205486388122
376.77007800034656.6431506948401733529.48964093949378.636095903292224
457.8609739340665718.1025856434394723520.334202713934725.24120324653207
5518.19479040093781545.906294690513522.3967581810710431535.0411222654507
6137.981516918203459.3004109727762413456.32053077092417.936506876068467
7115.2764766164049981.518029971288041861.94258685672781562.801872093553
8227.809548611128642.845552587858543278.639600532599672.244263806387
9108.73384179997886134.473281348623943162.880454846513215.45138754285665
10238.496368995613442225.9561104691043402.40727964384774754.6792064294074

Sub Motif Members