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UBERON:0000075

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Name:subdivision of skeletal system
Namespace:FANTOM
Definition:"Anatomical cluster consisting of the skeletal elements and articular elements that are part of an individual subdivision of the organism." [UBERON:cjm, UBERONREF:0000003]
Xrefs:
links:

FMA:85544
galen:ComplexSkeletalStructure
ncithesaurus:Skeletal_System_Part

SCTID:118966000
Synonyms: "skeletal system part" RELATED []
"skeletal system subdivision" EXACT [FMA:85544]
Alt_id: UBERON:0010322

Ontology association

Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.



link to ontology dataset


data

Parents

is_a:UBERON:0011216(organ system subdivision)
part_of:UBERON:0001434(skeletal system)



Children

is a:UBERON:0001130 (vertebral column),UBERON:0002517 (basicranium),UBERON:0003128 (cranium),UBERON:0003129 (skull),UBERON:0004761 (cartilaginous neurocranium),UBERON:0010323 (cranial skeletal system),UBERON:0011137 (axial skeletal system),UBERON:0011138 (post-cranial axial skeletal system),UBERON:0011158 (primary subdivision of skull),UBERON:0011159 (primary subdivision of cranial skeletal system),UBERON:0011249 (appendicular skeletal system)
part of:UBERON:0010912 (subdivision of skeleton)

Ontology Tree: Loaded from BioPortal


FF samples

It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens) Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term
TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000075 (subdivision of skeletal system), sorted by p-values
Analyst: Hideya Kawaji



link to source dataset
human : data

mouse : data

P-valueFFCPShort description
1.88e-51FFCP PHASE2:Hg19::chr3:174737010..174737023,+#_401b79322dc7bcdcd2810a036c808ab0p@chr3:174737010..174737023, +
1.88e-51FFCP PHASE1:Hg19::chr3:174737010..174737023,+#_401b79322dc7bcdcd2810a036c808ab0p@chr3:174737010..174737023, +
2.62e-44FFCP PHASE1:Hg19::chr20:21687193..21687206,+#_ed8758bb90017b2982c753d61f9e8f2fp4@PAX1
2.62e-44FFCP PHASE2:Hg19::chr20:21687193..21687206,+#_ed8758bb90017b2982c753d61f9e8f2fp4@PAX1
5.38e-44FFCP PHASE2:Mm9::chr1:24217213..24217226,+#_0f65b1f68670eeb5c25b2468bf65455bp@chr1:24217213..24217226, +
5.38e-44FFCP PHASE1:Mm9::chr1:24217213..24217226,+#_0f65b1f68670eeb5c25b2468bf65455bp@chr1:24217213..24217226, +
7.83e-38FFCP PHASE1:Hg19::chr22:23586671..23586679,+#_33653884859d73f39ced41f212773751p@chr22:23586671..23586679, +
7.83e-38FFCP PHASE2:Hg19::chr22:23586671..23586679,+#_33653884859d73f39ced41f212773751p@chr22:23586671..23586679, +
1.02e-36FFCP PHASE2:Hg19::chr14:37126870..37126882,+#_e9bb9f13cb1fa959c779a9f9fda8834ap1@ENST00000555639
1.02e-36FFCP PHASE1:Hg19::chr14:37126870..37126882,+#_e9bb9f13cb1fa959c779a9f9fda8834ap1@ENST00000555639
2.1e-35FFCP PHASE2:Hg19::chr14:37126765..37126799,+#_23cf261d0084387ceee5652d74071970p2@PAX9
2.1e-35FFCP PHASE1:Hg19::chr14:37126765..37126799,+#_23cf261d0084387ceee5652d74071970p2@PAX9
7.98e-34FFCP PHASE2:Hg19::chr1:75598362..75598407,-#_dc85b6c70736ef20beae6110a125d92ep1@ENST00000427892, p1@uc001dgp.1
7.98e-34FFCP PHASE1:Hg19::chr1:75598362..75598407,-#_dc85b6c70736ef20beae6110a125d92ep1@ENST00000427892, p1@uc001dgp.1
9.47e-34FFCP PHASE1:Hg19::chr14:37126814..37126834,+#_e73158edb69a26ad4316a33dfac0b5d7p4@PAX9
9.47e-34FFCP PHASE2:Hg19::chr14:37126814..37126834,+#_e73158edb69a26ad4316a33dfac0b5d7p4@PAX9
2.03e-33FFCP PHASE2:Mm9::chr15:78817557..78817567,+#_6fe1bcab5e5433691b23bde493b2a144p@chr15:78817557..78817567, +
2.03e-33FFCP PHASE1:Mm9::chr15:78817557..78817567,+#_6fe1bcab5e5433691b23bde493b2a144p@chr15:78817557..78817567, +
3.37e-33FFCP PHASE2:Mm9::chr11:77624716..77624729,+#_3e262b263f50c19622b7fb283f21bf2ep26@Myo18a
3.37e-33FFCP PHASE1:Mm9::chr11:77624716..77624729,+#_3e262b263f50c19622b7fb283f21bf2ep26@Myo18a
4.33e-33FFCP PHASE2:Mm9::chr9:21934585..21934591,-#_f821cb26cc14b5999a63031ca07e39fcp@chr9:21934585..21934591, -
4.33e-33FFCP PHASE1:Mm9::chr9:21934585..21934591,-#_f821cb26cc14b5999a63031ca07e39fcp@chr9:21934585..21934591, -
4.33e-33FFCP PHASE1:Mm9::chr2:32482372..32482381,+#_f821cb26cc14b5999a63031ca07e39fcp@chr2:32482372..32482381, +
4.33e-33FFCP PHASE1:Mm9::chr8:75097542..75097549,+#_f821cb26cc14b5999a63031ca07e39fcp@chr8:75097542..75097549, +
4.33e-33FFCP PHASE2:Mm9::chr8:75097542..75097549,+#_f821cb26cc14b5999a63031ca07e39fcp@chr8:75097542..75097549, +
4.33e-33FFCP PHASE2:Mm9::chr2:32482372..32482381,+#_f821cb26cc14b5999a63031ca07e39fcp@chr2:32482372..32482381, +
1.06e-32FFCP PHASE1:Hg19::chr14:37126852..37126863,+#_9613815bb4d008d44a393c3d57009a23p2@ENST00000555639
1.06e-32FFCP PHASE2:Hg19::chr14:37126852..37126863,+#_9613815bb4d008d44a393c3d57009a23p2@ENST00000555639
9.32e-32FFCP PHASE2:Hg19::chr1:75599683..75599699,-#_174a3be3cca12d03010c7a2cbf115487-, p@chr1:75599683..75599699
9.32e-32FFCP PHASE1:Hg19::chr1:75599683..75599699,-#_174a3be3cca12d03010c7a2cbf115487p@chr1:75599683..75599699, -
2.86e-31FFCP PHASE1:Hg19::chr5:30104176..30104187,-#_c099c8202dff6b937d8165259cda9e12p@chr5:30104176..30104187, -
2.86e-31FFCP PHASE2:Hg19::chr5:30104176..30104187,-#_c099c8202dff6b937d8165259cda9e12p@chr5:30104176..30104187, -
3.24e-31FFCP PHASE2:Hg19::chr1:75599672..75599682,-#_6b8060986f2ce66781d7ef68a5a574f9p@chr1:75599672..75599682, -
3.24e-31FFCP PHASE1:Hg19::chr1:75599672..75599682,-#_6b8060986f2ce66781d7ef68a5a574f9p@chr1:75599672..75599682, -
6.66e-30FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr11:75421384..75421397, +
6.66e-30FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr14:102297728..102297742, +
6.66e-30FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr16:93971325..93971337, -
6.66e-30FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr1:182528371..182528385, +
6.66e-30FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr14:20649897..20649907, +
6.66e-30FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_882a5095cc6c4cbecd9521b3bd0ca10b+, p@chr2:75320183..75320189
6.66e-30FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr8:13414266..13414279, +
6.66e-30FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr17:13983095..13983100, +
6.66e-30FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_882a5095cc6c4cbecd9521b3bd0ca10bp5@Tecta
6.66e-30FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_882a5095cc6c4cbecd9521b3bd0ca10bp1@Tmprss3
6.66e-30FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_882a5095cc6c4cbecd9521b3bd0ca10bp3@Gipc3
6.66e-30FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr16:93971325..93971337, -
6.66e-30FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr10:108316802..108316807, -
6.66e-30FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_882a5095cc6c4cbecd9521b3bd0ca10bp3@Gm1322
6.66e-30FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr2:75320183..75320189, +
6.66e-30FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr2:53464168..53464175, +
6.66e-30FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_882a5095cc6c4cbecd9521b3bd0ca10bp5@Fer1l6
6.66e-30FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr14:31283072..31283081, -
6.66e-30FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr11:4689776..4689785, -
6.66e-30FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr1:94627290..94627299, -
6.66e-30FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_882a5095cc6c4cbecd9521b3bd0ca10bp4@Otogl
6.66e-30FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr10:67371994..67372010, +
6.66e-30FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_882a5095cc6c4cbecd9521b3bd0ca10bp1@Strc
6.66e-30FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr11:4689837..4689845, -
6.66e-30FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_882a5095cc6c4cbecd9521b3bd0ca10bp1@Strc
6.66e-30FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_882a5095cc6c4cbecd9521b3bd0ca10bp2@Tecta
6.66e-30FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr15:103146966..103146971, -
6.66e-30FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr1:172843813..172843834, -
6.66e-30FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_882a5095cc6c4cbecd9521b3bd0ca10bp9@Otof
6.66e-30FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr3:154459246..154459253, +
6.66e-30FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr15:12848147..12848162, +
6.66e-30FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr15:89215306..89215315, +
6.66e-30FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_882a5095cc6c4cbecd9521b3bd0ca10bp1@Kncn
6.66e-30FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_882a5095cc6c4cbecd9521b3bd0ca10bp1@Tmprss3
6.66e-30FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr15:85334335..85334353, +
6.66e-30FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr9:42206730..42206739, -
6.66e-30FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_882a5095cc6c4cbecd9521b3bd0ca10b-, p@chr11:8405038..8405048
6.66e-30FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chrX:154140800..154140810, +
6.66e-30FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr13:78257454..78257465, +
6.66e-30FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_882a5095cc6c4cbecd9521b3bd0ca10bp1@Tmc1
6.66e-30FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr19:10536767..10536777, -
6.66e-30FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_882a5095cc6c4cbecd9521b3bd0ca10bp1@Otog
6.66e-30FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr1:94627290..94627299, -
6.66e-30FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr7:29733825..29733837, -
6.66e-30FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_882a5095cc6c4cbecd9521b3bd0ca10bp1@Tectb
6.66e-30FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_882a5095cc6c4cbecd9521b3bd0ca10bp2@Tecta
6.66e-30FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr1:182528388..182528403, +
6.66e-30FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr3:81012915..81012923, +
6.66e-30FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr18:66033526..66033539, -
6.66e-30FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr15:65641741..65641748, +
6.66e-30FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr15:65641741..65641748, +
6.66e-30FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr4:130461150..130461185, +
6.66e-30FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_882a5095cc6c4cbecd9521b3bd0ca10bp10@Sec11a
6.66e-30FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_882a5095cc6c4cbecd9521b3bd0ca10bp3@Otogl
6.66e-30FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr5:150945209..150945220, +
6.66e-30FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr13:58283583..58283607, -
6.66e-30FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr9:42207397..42207408, -
6.66e-30FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr5:72652660..72652667, +
6.66e-30FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_882a5095cc6c4cbecd9521b3bd0ca10bp2@Otol1
6.66e-30FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr5:144115382..144115389, +
6.66e-30FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_882a5095cc6c4cbecd9521b3bd0ca10bp1@Otogl
6.66e-30FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_882a5095cc6c4cbecd9521b3bd0ca10bp3@Gipc3
6.66e-30FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_882a5095cc6c4cbecd9521b3bd0ca10bp4@Tecta
6.66e-30FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_882a5095cc6c4cbecd9521b3bd0ca10bp1@Gm1322
6.66e-30FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_882a5095cc6c4cbecd9521b3bd0ca10bp1@Espnl
6.66e-30FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_882a5095cc6c4cbecd9521b3bd0ca10bp@chr1:172843796..172843799, -