Personal tools

UBERON:0000101

From FANTOM5_SSTAR

Jump to: navigation, search

Name:lobe of lung
Namespace:FANTOM
Definition:"A lung lobe is one of the rounded projections that compose the lung[GO]." [GOC:GO]
Xrefs:
links:

FMA:7311
galen:LobeOfLung
ncithesaurus:Lung_Lobe
OpenCyc:Mx4rvo6-vpwpEbGdrcN5Y29ycA

SCTID:245524004
Synonyms: "lung lobe" EXACT []
"pulminory lobe" EXACT []
"pulmonary lobe" EXACT [FMA:7311]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000064(organ part),UBERON:0004119(endoderm-derived structure)
part_of:UBERON:0002048(lung)



Children

is a:UBERON:0006518 (right lung lobe),UBERON:0008949 (lower lobe of lung)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000101 (lobe of lung), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr2:211117597..211117606,+#_bb9436d85e355b87202ac7aaf421e4c0p@chr2:211117597..211117606, +
5.42e-195FFCP PHASE1:Hg19::chr10:81374723..81374726,-#_bb9436d85e355b87202ac7aaf421e4c0p@chr10:81374723..81374726, -
5.42e-195FFCP PHASE1:Hg19::chrX:93772866..93772868,-#_bb9436d85e355b87202ac7aaf421e4c0p@chrX:93772866..93772868, -
5.42e-195FFCP PHASE2:Hg19::chr6:32148852..32148862,-#_bb9436d85e355b87202ac7aaf421e4c0p@chr6:32148852..32148862, -
5.42e-195FFCP PHASE2:Hg19::chrX:93772866..93772868,-#_bb9436d85e355b87202ac7aaf421e4c0p@chrX:93772866..93772868, -
5.42e-195FFCP PHASE1:Hg19::chr8:22021803..22021813,-#_bb9436d85e355b87202ac7aaf421e4c0p@chr8:22021803..22021813, -
5.42e-195FFCP PHASE1:Hg19::chr10:81316085..81316090,-#_bb9436d85e355b87202ac7aaf421e4c0p@chr10:81316085..81316090, -
5.42e-195FFCP PHASE2:Hg19::chr2:96331830..96331836,+#_bb9436d85e355b87202ac7aaf421e4c0p1@ENST00000425887, p1@uc002suw.1
5.42e-195FFCP PHASE1:Hg19::chr6:32148852..32148862,-#_bb9436d85e355b87202ac7aaf421e4c0p@chr6:32148852..32148862, -
5.42e-195FFCP PHASE2:Hg19::chr2:85894638..85894644,+#_bb9436d85e355b87202ac7aaf421e4c0p@chr2:85894638..85894644, +
5.42e-195FFCP PHASE1:Hg19::chr2:85894638..85894644,+#_bb9436d85e355b87202ac7aaf421e4c0p@chr2:85894638..85894644, +
5.42e-195FFCP PHASE1:Hg19::chr2:96331830..96331836,+#_bb9436d85e355b87202ac7aaf421e4c0p1@ENST00000425887, p1@uc002suw.1
5.42e-195FFCP PHASE2:Hg19::chr2:85893058..85893063,-#_bb9436d85e355b87202ac7aaf421e4c0p35@SFTPB
5.42e-195FFCP PHASE2:Hg19::chr2:85884987..85884992,-#_bb9436d85e355b87202ac7aaf421e4c0p@chr2:85884987..85884992, -
5.42e-195FFCP PHASE2:Hg19::chr8:22021803..22021813,-#_bb9436d85e355b87202ac7aaf421e4c0p@chr8:22021803..22021813, -
5.42e-195FFCP PHASE1:Hg19::chr2:85893058..85893063,-#_bb9436d85e355b87202ac7aaf421e4c0p35@SFTPB
5.42e-195FFCP PHASE1:Hg19::chr2:85884987..85884992,-#_bb9436d85e355b87202ac7aaf421e4c0p@chr2:85884987..85884992, -
5.42e-195FFCP PHASE2:Hg19::chr10:81316872..81316887,+#_bb9436d85e355b87202ac7aaf421e4c0+, p@chr10:81316872..81316887
5.42e-195FFCP PHASE2:Hg19::chr2:211117597..211117606,+#_bb9436d85e355b87202ac7aaf421e4c0p@chr2:211117597..211117606, +
5.42e-195FFCP PHASE2:Hg19::chr10:81374723..81374726,-#_bb9436d85e355b87202ac7aaf421e4c0p@chr10:81374723..81374726, -
5.42e-195FFCP PHASE2:Hg19::chr2:85894675..85894679,+#_bb9436d85e355b87202ac7aaf421e4c0p@chr2:85894675..85894679, +
5.42e-195FFCP PHASE1:Hg19::chr2:85894675..85894679,+#_bb9436d85e355b87202ac7aaf421e4c0p@chr2:85894675..85894679, +
5.42e-195FFCP PHASE1:Hg19::chr10:81316872..81316887,+#_bb9436d85e355b87202ac7aaf421e4c0p@chr10:81316872..81316887, +
5.42e-195FFCP PHASE2:Hg19::chr10:81316085..81316090,-#_bb9436d85e355b87202ac7aaf421e4c0p@chr10:81316085..81316090, -
9.37e-99FFCP PHASE2:Hg19::chr10:81315944..81315951,-#_239a73af825730138dffc117c934ceb5p@chr10:81315944..81315951, -
9.37e-99FFCP PHASE2:Hg19::chr2:85894689..85894696,+#_239a73af825730138dffc117c934ceb5p@chr2:85894689..85894696, +
9.37e-99FFCP PHASE1:Hg19::chr8:22021454..22021463,+#_239a73af825730138dffc117c934ceb5p@chr8:22021454..22021463, +
9.37e-99FFCP PHASE2:Hg19::chr10:81374331..81374339,+#_239a73af825730138dffc117c934ceb5p@chr10:81374331..81374339, +
9.37e-99FFCP PHASE1:Hg19::chr10:81374313..81374327,+#_239a73af825730138dffc117c934ceb5p@chr10:81374313..81374327, +
9.37e-99FFCP PHASE1:Hg19::chr2:85894689..85894696,+#_239a73af825730138dffc117c934ceb5+, p@chr2:85894689..85894696
9.37e-99FFCP PHASE1:Hg19::chr10:81316910..81316917,-#_239a73af825730138dffc117c934ceb5p@chr10:81316910..81316917, -
9.37e-99FFCP PHASE2:Hg19::chr10:81316132..81316137,-#_239a73af825730138dffc117c934ceb5p@chr10:81316132..81316137, -
9.37e-99FFCP PHASE2:Hg19::chr10:81374587..81374595,+#_239a73af825730138dffc117c934ceb5p@chr10:81374587..81374595, +
9.37e-99FFCP PHASE1:Hg19::chr10:81316311..81316313,-#_239a73af825730138dffc117c934ceb5p@chr10:81316311..81316313, -
9.37e-99FFCP PHASE1:Hg19::chr6:117746871..117746882,-#_239a73af825730138dffc117c934ceb5p10@ROS1
9.37e-99FFCP PHASE2:Hg19::chr6:32150708..32150711,-#_239a73af825730138dffc117c934ceb5p7@AGER
9.37e-99FFCP PHASE2:Hg19::chr8:22021526..22021532,+#_239a73af825730138dffc117c934ceb5p@chr8:22021526..22021532, +
9.37e-99FFCP PHASE2:Hg19::chr10:81316753..81316759,-#_239a73af825730138dffc117c934ceb5p@chr10:81316753..81316759, -
9.37e-99FFCP PHASE2:Hg19::chr10:81374752..81374761,+#_239a73af825730138dffc117c934ceb5p@chr10:81374752..81374761, +
9.37e-99FFCP PHASE1:Hg19::chr8:22021482..22021493,+#_239a73af825730138dffc117c934ceb5p@chr8:22021482..22021493, +
9.37e-99FFCP PHASE1:Hg19::chr6:32150708..32150711,-#_239a73af825730138dffc117c934ceb5p7@AGER
9.37e-99FFCP PHASE1:Hg19::chr10:81374331..81374339,+#_239a73af825730138dffc117c934ceb5p@chr10:81374331..81374339, +
9.37e-99FFCP PHASE2:Hg19::chr6:32148869..32148878,-#_239a73af825730138dffc117c934ceb5p@chr6:32148869..32148878, -
9.37e-99FFCP PHASE1:Hg19::chr8:22020085..22020093,+#_239a73af825730138dffc117c934ceb5p12@SFTPC
9.37e-99FFCP PHASE2:Hg19::chr8:22020994..22020998,+#_239a73af825730138dffc117c934ceb5p@chr8:22020994..22020998, +
9.37e-99FFCP PHASE2:Hg19::chr2:85892915..85892916,-#_239a73af825730138dffc117c934ceb5p40@SFTPB
9.37e-99FFCP PHASE2:Hg19::chr3:127109563..127109564,-#_239a73af825730138dffc117c934ceb5p2@ENST00000488425, p2@uc003ejj.2
9.37e-99FFCP PHASE2:Hg19::chr6:117746871..117746882,-#_239a73af825730138dffc117c934ceb5p10@ROS1
9.37e-99FFCP PHASE1:Hg19::chr10:81315944..81315951,-#_239a73af825730138dffc117c934ceb5p@chr10:81315944..81315951, -
9.37e-99FFCP PHASE2:Hg19::chr10:81316558..81316565,-#_239a73af825730138dffc117c934ceb5p@chr10:81316558..81316565, -
9.37e-99FFCP PHASE2:Hg19::chr10:23631651..23631656,+#_239a73af825730138dffc117c934ceb5p@chr10:23631651..23631656, +
9.37e-99FFCP PHASE1:Hg19::chr8:22021903..22021951,-#_239a73af825730138dffc117c934ceb5p@chr8:22021903..22021951, -
9.37e-99FFCP PHASE1:Hg19::chr10:81374587..81374595,+#_239a73af825730138dffc117c934ceb5p@chr10:81374587..81374595, +
9.37e-99FFCP PHASE1:Hg19::chr2:85892915..85892916,-#_239a73af825730138dffc117c934ceb5p40@SFTPB
9.37e-99FFCP PHASE1:Hg19::chr10:81316132..81316137,-#_239a73af825730138dffc117c934ceb5p@chr10:81316132..81316137, -
9.37e-99FFCP PHASE2:Hg19::chr10:81316764..81316776,-#_239a73af825730138dffc117c934ceb5p@chr10:81316764..81316776, -
9.37e-99FFCP PHASE2:Hg19::chr8:22020196..22020202,+#_239a73af825730138dffc117c934ceb5p13@SFTPC
9.37e-99FFCP PHASE1:Hg19::chr6:32148869..32148878,-#_239a73af825730138dffc117c934ceb5p@chr6:32148869..32148878, -
9.37e-99FFCP PHASE2:Hg19::chr2:85885348..85885355,-#_239a73af825730138dffc117c934ceb5p@chr2:85885348..85885355, -
9.37e-99FFCP PHASE1:Hg19::chr10:81316753..81316759,-#_239a73af825730138dffc117c934ceb5p@chr10:81316753..81316759, -
9.37e-99FFCP PHASE2:Hg19::chr10:81316023..81316032,-#_239a73af825730138dffc117c934ceb5p@chr10:81316023..81316032, -
9.37e-99FFCP PHASE2:Hg19::chr2:85889234..85889238,-#_239a73af825730138dffc117c934ceb5p@chr2:85889234..85889238, -
9.37e-99FFCP PHASE1:Hg19::chr10:81374752..81374761,+#_239a73af825730138dffc117c934ceb5p@chr10:81374752..81374761, +
9.37e-99FFCP PHASE2:Hg19::chr10:81374462..81374469,+#_239a73af825730138dffc117c934ceb5p@chr10:81374462..81374469, +
9.37e-99FFCP PHASE1:Hg19::chr3:127109563..127109564,-#_239a73af825730138dffc117c934ceb5p2@ENST00000488425, p2@uc003ejj.2
9.37e-99FFCP PHASE1:Hg19::chr2:85885348..85885355,-#_239a73af825730138dffc117c934ceb5p@chr2:85885348..85885355, -
9.37e-99FFCP PHASE2:Hg19::chr6:32149013..32149018,-#_239a73af825730138dffc117c934ceb5p@chr6:32149013..32149018, -
9.37e-99FFCP PHASE2:Hg19::chr8:22021454..22021463,+#_239a73af825730138dffc117c934ceb5p@chr8:22021454..22021463, +
9.37e-99FFCP PHASE1:Hg19::chr10:23631651..23631656,+#_239a73af825730138dffc117c934ceb5p@chr10:23631651..23631656, +
9.37e-99FFCP PHASE1:Hg19::chr2:85889234..85889238,-#_239a73af825730138dffc117c934ceb5p@chr2:85889234..85889238, -
9.37e-99FFCP PHASE2:Hg19::chr2:85894661..85894668,+#_239a73af825730138dffc117c934ceb5p@chr2:85894661..85894668, +
9.37e-99FFCP PHASE1:Hg19::chr10:81316558..81316565,-#_239a73af825730138dffc117c934ceb5p@chr10:81316558..81316565, -
9.37e-99FFCP PHASE2:Hg19::chr2:85886515..85886520,-#_239a73af825730138dffc117c934ceb5p@chr2:85886515..85886520, -
9.37e-99FFCP PHASE1:Hg19::chr2:85894661..85894668,+#_239a73af825730138dffc117c934ceb5p@chr2:85894661..85894668, +
9.37e-99FFCP PHASE1:Hg19::chr6:32149013..32149018,-#_239a73af825730138dffc117c934ceb5p@chr6:32149013..32149018, -
9.37e-99FFCP PHASE1:Hg19::chr10:81316764..81316776,-#_239a73af825730138dffc117c934ceb5p@chr10:81316764..81316776, -
9.37e-99FFCP PHASE2:Hg19::chr10:81316041..81316047,-#_239a73af825730138dffc117c934ceb5p@chr10:81316041..81316047, -
9.37e-99FFCP PHASE2:Hg19::chr10:81374819..81374828,+#_239a73af825730138dffc117c934ceb5p@chr10:81374819..81374828, +
9.37e-99FFCP PHASE1:Hg19::chr2:85886515..85886520,-#_239a73af825730138dffc117c934ceb5p@chr2:85886515..85886520, -
9.37e-99FFCP PHASE1:Hg19::chr8:22021526..22021532,+#_239a73af825730138dffc117c934ceb5p@chr8:22021526..22021532, +
9.37e-99FFCP PHASE1:Hg19::chr10:81374462..81374469,+#_239a73af825730138dffc117c934ceb5p@chr10:81374462..81374469, +
9.37e-99FFCP PHASE2:Hg19::chr8:22021482..22021493,+#_239a73af825730138dffc117c934ceb5+, p@chr8:22021482..22021493
9.37e-99FFCP PHASE1:Hg19::chr10:81316023..81316032,-#_239a73af825730138dffc117c934ceb5p@chr10:81316023..81316032, -
9.37e-99FFCP PHASE2:Hg19::chr8:22020085..22020093,+#_239a73af825730138dffc117c934ceb5p12@SFTPC
9.37e-99FFCP PHASE1:Hg19::chr8:22020994..22020998,+#_239a73af825730138dffc117c934ceb5p@chr8:22020994..22020998, +
9.37e-99FFCP PHASE2:Hg19::chr10:81374313..81374327,+#_239a73af825730138dffc117c934ceb5+, p@chr10:81374313..81374327
9.37e-99FFCP PHASE2:Hg19::chr8:22021903..22021951,-#_239a73af825730138dffc117c934ceb5p@chr8:22021903..22021951, -
9.37e-99FFCP PHASE2:Hg19::chr10:81316910..81316917,-#_239a73af825730138dffc117c934ceb5p@chr10:81316910..81316917, -
9.37e-99FFCP PHASE2:Hg19::chr2:85892885..85892890,-#_239a73af825730138dffc117c934ceb5p23@SFTPB
9.37e-99FFCP PHASE2:Hg19::chr10:81316311..81316313,-#_239a73af825730138dffc117c934ceb5p@chr10:81316311..81316313, -
9.37e-99FFCP PHASE1:Hg19::chr10:81374819..81374828,+#_239a73af825730138dffc117c934ceb5p@chr10:81374819..81374828, +
9.37e-99FFCP PHASE1:Hg19::chr8:22020196..22020202,+#_239a73af825730138dffc117c934ceb5p13@SFTPC
9.37e-99FFCP PHASE1:Hg19::chr2:85892885..85892890,-#_239a73af825730138dffc117c934ceb5p23@SFTPB
9.37e-99FFCP PHASE1:Hg19::chr10:81316041..81316047,-#_239a73af825730138dffc117c934ceb5p@chr10:81316041..81316047, -
2.55e-98FFCP PHASE2:Hg19::chr10:81316679..81316685,+#_28ebc3a7e43297c6bc11a75c4b026da1p@chr10:81316679..81316685, +
2.55e-98FFCP PHASE1:Hg19::chr2:85890569..85890576,-#_28ebc3a7e43297c6bc11a75c4b026da1p24@SFTPB
2.55e-98FFCP PHASE1:Hg19::chr4:189645023..189645058,-#_28ebc3a7e43297c6bc11a75c4b026da1p@chr4:189645023..189645058, -
2.55e-98FFCP PHASE1:Hg19::chr6:30905155..30905161,-#_28ebc3a7e43297c6bc11a75c4b026da1p@chr6:30905155..30905161, -
2.55e-98FFCP PHASE2:Hg19::chr2:85886640..85886647,+#_28ebc3a7e43297c6bc11a75c4b026da1p@chr2:85886640..85886647, +
2.55e-98FFCP PHASE1:Hg19::chr4:173916869..173916878,-#_28ebc3a7e43297c6bc11a75c4b026da1p3@uc003isx.1