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UBERON:0000162

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Name:cloaca
Namespace:FANTOM
Definition:"Posterior opening that serves as the only such opening for the intestinal and urinary tracts of certain animal species" [Wikipedia:Cloaca]
Xrefs:
links:

AAO:0000095
GAID:1206
MESH:A.13.223
ncithesaurus:Cloaca
SCTID:362857006
TAO:0000330
VHOG:0001186
XAO:0000244

ZFA:0000330
Synonyms: "cloacal chamber" RELATED []
"vent" RELATED []
Comments:Human beings only have an embryonic cloaca, which is split up into separate tracts during the development of the urinary and reproductive organs[WP]. We deliberately exclude the wbbt class here, but may in future have a grouping class

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000481(multi-tissue structure),UBERON:0004120(mesoderm-derived structure)
part_of:UBERON:0001555(digestive tract),UBERON:0004122(genitourinary system)



Children

is a:UBERON:0000163 (embryonic cloaca)
part of:UBERON:0012481 (cloacal epithelium)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000162 (cloaca), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
4.58e-44FFCP PHASE2:Mm9::chr1:132699659..132699668,+#_10f68facfbb7399895e5c2ac3d49a695p@chr1:132699659..132699668, +
4.58e-44FFCP PHASE1:Mm9::chr1:132699659..132699668,+#_10f68facfbb7399895e5c2ac3d49a695p@chr1:132699659..132699668, +
1.7e-39FFCP PHASE2:Mm9::chr9:96425983..96425992,+#_33633447503fc13438e784bddfd0b0b9p@chr9:96425983..96425992, +
1.7e-39FFCP PHASE2:Mm9::chr15:58237385..58237400,+#_33633447503fc13438e784bddfd0b0b9p@chr15:58237385..58237400, +
1.7e-39FFCP PHASE2:Mm9::chr7:114836650..114836663,+#_33633447503fc13438e784bddfd0b0b9p@chr7:114836650..114836663, +
1.7e-39FFCP PHASE1:Mm9::chr9:96425825..96425834,-#_33633447503fc13438e784bddfd0b0b9p@chr9:96425825..96425834, -
1.7e-39FFCP PHASE1:Mm9::chr9:96425983..96425992,+#_33633447503fc13438e784bddfd0b0b9p@chr9:96425983..96425992, +
1.7e-39FFCP PHASE1:Mm9::chr7:114836650..114836663,+#_33633447503fc13438e784bddfd0b0b9p@chr7:114836650..114836663, +
1.7e-39FFCP PHASE1:Mm9::chr15:58237385..58237400,+#_33633447503fc13438e784bddfd0b0b9p@chr15:58237385..58237400, +
1.7e-39FFCP PHASE2:Mm9::chr9:96425825..96425834,-#_33633447503fc13438e784bddfd0b0b9p@chr9:96425825..96425834, -
2.66e-39FFCP PHASE1:Mm9::chr6:42547567..42547580,-#_2107f23b16fe2911712a493b9b1a6304p4@Fam115e
2.66e-39FFCP PHASE1:Mm9::chr7:28924794..28924814,+#_2107f23b16fe2911712a493b9b1a6304p@chr7:28924794..28924814, +
2.66e-39FFCP PHASE2:Mm9::chr6:124520368..124520379,+#_2107f23b16fe2911712a493b9b1a6304p4@C1rb
2.66e-39FFCP PHASE2:Mm9::chr7:28914478..28914498,+#_2107f23b16fe2911712a493b9b1a6304p3@9530053A07Rik
2.66e-39FFCP PHASE1:Mm9::chr7:28914450..28914477,+#_2107f23b16fe2911712a493b9b1a6304p2@9530053A07Rik
2.66e-39FFCP PHASE1:Mm9::chr7:28900349..28900364,-#_2107f23b16fe2911712a493b9b1a6304p@chr7:28900349..28900364, -
2.66e-39FFCP PHASE2:Mm9::chr6:42547567..42547580,-#_2107f23b16fe2911712a493b9b1a6304p4@Fam115e
2.66e-39FFCP PHASE1:Mm9::chr7:55028037..55028075,+#_2107f23b16fe2911712a493b9b1a6304p@chr7:55028037..55028075, +
2.66e-39FFCP PHASE2:Mm9::chr7:28900349..28900364,-#_2107f23b16fe2911712a493b9b1a6304p@chr7:28900349..28900364, -
2.66e-39FFCP PHASE1:Mm9::chr6:124520368..124520379,+#_2107f23b16fe2911712a493b9b1a6304p4@C1rb
2.66e-39FFCP PHASE1:Mm9::chr7:28914478..28914498,+#_2107f23b16fe2911712a493b9b1a6304p3@9530053A07Rik
2.66e-39FFCP PHASE1:Mm9::chr9:36337031..36337049,-#_2107f23b16fe2911712a493b9b1a6304p@chr9:36337031..36337049, -
2.66e-39FFCP PHASE2:Mm9::chr9:120464717..120464741,+#_2107f23b16fe2911712a493b9b1a6304p@chr9:120464717..120464741, +
2.66e-39FFCP PHASE1:Mm9::chr7:28922549..28922561,+#_2107f23b16fe2911712a493b9b1a6304p@chr7:28922549..28922561, +
2.66e-39FFCP PHASE1:Mm9::chr9:120464717..120464741,+#_2107f23b16fe2911712a493b9b1a6304p@chr9:120464717..120464741, +
2.66e-39FFCP PHASE2:Mm9::chr7:55028037..55028075,+#_2107f23b16fe2911712a493b9b1a6304p@chr7:55028037..55028075, +
2.66e-39FFCP PHASE1:Mm9::chr5:120136866..120136874,+#_2107f23b16fe2911712a493b9b1a6304p@chr5:120136866..120136874, +
2.66e-39FFCP PHASE2:Mm9::chr9:120464756..120464765,+#_2107f23b16fe2911712a493b9b1a6304p@chr9:120464756..120464765, +
2.66e-39FFCP PHASE2:Mm9::chr5:120136866..120136874,+#_2107f23b16fe2911712a493b9b1a6304p@chr5:120136866..120136874, +
2.66e-39FFCP PHASE2:Mm9::chr7:28924794..28924814,+#_2107f23b16fe2911712a493b9b1a6304p@chr7:28924794..28924814, +
2.66e-39FFCP PHASE1:Mm9::chr9:120464756..120464765,+#_2107f23b16fe2911712a493b9b1a6304p@chr9:120464756..120464765, +
2.66e-39FFCP PHASE2:Mm9::chr9:36337031..36337049,-#_2107f23b16fe2911712a493b9b1a6304p@chr9:36337031..36337049, -
2.66e-39FFCP PHASE2:Mm9::chr7:28914450..28914477,+#_2107f23b16fe2911712a493b9b1a6304p2@9530053A07Rik
2.66e-39FFCP PHASE2:Mm9::chr7:28922549..28922561,+#_2107f23b16fe2911712a493b9b1a6304p@chr7:28922549..28922561, +
2.66e-39FFCP PHASE1:Mm9::chr6:124520322..124520333,+#_2107f23b16fe2911712a493b9b1a6304p3@C1rb
2.66e-39FFCP PHASE2:Mm9::chr6:124520322..124520333,+#_2107f23b16fe2911712a493b9b1a6304p3@C1rb
2.66e-39FFCP PHASE1:Mm9::chr19:11353922..11353934,-#_2107f23b16fe2911712a493b9b1a6304p@chr19:11353922..11353934, -
2.66e-39FFCP PHASE2:Mm9::chr19:11353922..11353934,-#_2107f23b16fe2911712a493b9b1a6304p@chr19:11353922..11353934, -
2.02e-32FFCP PHASE1:Hg19::chr10:91567075..91567084,+#_43f6be8aecdc427b7459cacf9106d116p@chr10:91567075..91567084, +
2.02e-32FFCP PHASE2:Hg19::chr10:91567053..91567066,+#_43f6be8aecdc427b7459cacf9106d116p@chr10:91567053..91567066, +
2.02e-32FFCP PHASE2:Hg19::chr10:91567075..91567084,+#_43f6be8aecdc427b7459cacf9106d116p@chr10:91567075..91567084, +
2.02e-32FFCP PHASE1:Hg19::chr10:91567053..91567066,+#_43f6be8aecdc427b7459cacf9106d116p@chr10:91567053..91567066, +
4.03e-30FFCP PHASE2:Mm9::chr7:31397780..31397790,-#_66afd312bc0e8f7a97a6696e6b9a3b24p3@Upk1a
4.03e-30FFCP PHASE2:Mm9::chr3:92288406..92288413,-#_66afd312bc0e8f7a97a6696e6b9a3b24p@chr3:92288406..92288413, -
4.03e-30FFCP PHASE1:Mm9::chr14:32955207..32955211,+#_66afd312bc0e8f7a97a6696e6b9a3b24p1@Msmb
4.03e-30FFCP PHASE1:Mm9::chr7:31397780..31397790,-#_66afd312bc0e8f7a97a6696e6b9a3b24p3@Upk1a
4.03e-30FFCP PHASE2:Mm9::chr7:114836670..114836681,+#_66afd312bc0e8f7a97a6696e6b9a3b24p@chr7:114836670..114836681, +
4.03e-30FFCP PHASE2:Mm9::chr14:32955207..32955211,+#_66afd312bc0e8f7a97a6696e6b9a3b24p1@Msmb
4.03e-30FFCP PHASE1:Mm9::chr7:114836670..114836681,+#_66afd312bc0e8f7a97a6696e6b9a3b24p@chr7:114836670..114836681, +
4.03e-30FFCP PHASE1:Mm9::chr3:92288406..92288413,-#_66afd312bc0e8f7a97a6696e6b9a3b24p@chr3:92288406..92288413, -
5.61e-30FFCP PHASE1:Mm9::chr12:80992302..80992309,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr12:80992302..80992309, +
5.61e-30FFCP PHASE1:Mm9::chr6:42536000..42536005,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr6:42536000..42536005, -
5.61e-30FFCP PHASE1:Mm9::chr7:55008002..55008008,-#_7a2b4c988cd60b838ccc465a634e33f1-, p@chr7:55008002..55008008
5.61e-30FFCP PHASE1:Mm9::chr18:64859665..64859669,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr18:64859665..64859669, +
5.61e-30FFCP PHASE2:Mm9::chr17:27866019..27866031,-#_7a2b4c988cd60b838ccc465a634e33f1p2@Spdef
5.61e-30FFCP PHASE2:Mm9::chr1:37769602..37769611,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr1:37769602..37769611, -
5.61e-30FFCP PHASE2:Mm9::chr12:114453231..114453265,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr12:114453231..114453265, -
5.61e-30FFCP PHASE2:Mm9::chr2:80164541..80164545,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr2:80164541..80164545, +
5.61e-30FFCP PHASE2:Mm9::chr10:77520043..77520048,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr10:77520043..77520048, +
5.61e-30FFCP PHASE2:Mm9::chr14:29722238..29722242,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr14:29722238..29722242, -
5.61e-30FFCP PHASE2:Mm9::chr6:42537176..42537182,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr6:42537176..42537182, -
5.61e-30FFCP PHASE1:Mm9::chr6:42543450..42543455,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr6:42543450..42543455, -
5.61e-30FFCP PHASE1:Mm9::chr11:89595040..89595050,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr11:89595040..89595050, -
5.61e-30FFCP PHASE2:Mm9::chr18:44429795..44429800,+#_7a2b4c988cd60b838ccc465a634e33f1p3@Npy6r
5.61e-30FFCP PHASE2:Mm9::chr4:102102677..102102684,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr4:102102677..102102684, +
5.61e-30FFCP PHASE2:Mm9::chr6:42536469..42536478,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr6:42536469..42536478, -
5.61e-30FFCP PHASE1:Mm9::chr6:42537176..42537182,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr6:42537176..42537182, -
5.61e-30FFCP PHASE2:Mm9::chrX:137642090..137642093,-#_7a2b4c988cd60b838ccc465a634e33f1p8@Col4a6
5.61e-30FFCP PHASE1:Mm9::chr17:27866019..27866031,-#_7a2b4c988cd60b838ccc465a634e33f1p2@Spdef
5.61e-30FFCP PHASE1:Mm9::chr16:20186617..20186622,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr16:20186617..20186622, +
5.61e-30FFCP PHASE2:Mm9::chr19:34791339..34791346,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr19:34791339..34791346, -
5.61e-30FFCP PHASE2:Mm9::chr6:42551847..42551862,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr6:42551847..42551862, -
5.61e-30FFCP PHASE1:Mm9::chr7:55028223..55028250,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr7:55028223..55028250, +
5.61e-30FFCP PHASE1:Mm9::chr18:73894503..73894506,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr18:73894503..73894506, -
5.61e-30FFCP PHASE2:Mm9::chr16:20188864..20188875,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr16:20188864..20188875, +
5.61e-30FFCP PHASE2:Mm9::chr3:95514619..95514622,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr3:95514619..95514622, -
5.61e-30FFCP PHASE2:Mm9::chr9:36341608..36341609,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr9:36341608..36341609, -
5.61e-30FFCP PHASE1:Mm9::chr6:42547830..42547837,-#_7a2b4c988cd60b838ccc465a634e33f1p8@Fam115e
5.61e-30FFCP PHASE1:Mm9::chr11:100107526..100107540,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr11:100107526..100107540, -
5.61e-30FFCP PHASE2:Mm9::chr7:55008002..55008008,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr7:55008002..55008008, -
5.61e-30FFCP PHASE1:Mm9::chr9:74005044..74005065,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr9:74005044..74005065, +
5.61e-30FFCP PHASE1:Mm9::chr6:42535901..42535907,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr6:42535901..42535907, -
5.61e-30FFCP PHASE1:Mm9::chr9:36300946..36300953,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr9:36300946..36300953, -
5.61e-30FFCP PHASE1:Mm9::chr17:24078882..24078896,+#_7a2b4c988cd60b838ccc465a634e33f1p2@Sbp
5.61e-30FFCP PHASE1:Mm9::chr6:42547375..42547383,-#_7a2b4c988cd60b838ccc465a634e33f1p10@Fam115e
5.61e-30FFCP PHASE2:Mm9::chr11:100107430..100107473,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr11:100107430..100107473, -
5.61e-30FFCP PHASE1:Mm9::chrX:75093379..75093383,+#_7a2b4c988cd60b838ccc465a634e33f1p@chrX:75093379..75093383, +
5.61e-30FFCP PHASE2:Mm9::chr15:101506963..101506974,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr15:101506963..101506974, +
5.61e-30FFCP PHASE1:Mm9::chr2:137020090..137020093,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr2:137020090..137020093, +
5.61e-30FFCP PHASE1:Mm9::chr2:80164541..80164545,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr2:80164541..80164545, +
5.61e-30FFCP PHASE1:Mm9::chr6:122422716..122422728,-#_7a2b4c988cd60b838ccc465a634e33f1p15@Rimklb
5.61e-30FFCP PHASE1:Mm9::chr6:42551847..42551862,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr6:42551847..42551862, -
5.61e-30FFCP PHASE1:Mm9::chr6:42536009..42536044,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr6:42536009..42536044, +
5.61e-30FFCP PHASE2:Mm9::chr17:24078882..24078896,+#_7a2b4c988cd60b838ccc465a634e33f1p2@Sbp
5.61e-30FFCP PHASE1:Mm9::chr7:123747566..123747567,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr7:123747566..123747567, +
5.61e-30FFCP PHASE2:Mm9::chr9:74005044..74005065,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr9:74005044..74005065, +
5.61e-30FFCP PHASE1:Mm9::chr11:100065595..100065616,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr11:100065595..100065616, -
5.61e-30FFCP PHASE2:Mm9::chr10:75355747..75355754,-#_7a2b4c988cd60b838ccc465a634e33f1p@chr10:75355747..75355754, -
5.61e-30FFCP PHASE1:Mm9::chr19:58073599..58073605,+#_7a2b4c988cd60b838ccc465a634e33f1p@chr19:58073599..58073605, +
5.61e-30FFCP PHASE1:Mm9::chr9:122970904..122970907,-#_7a2b4c988cd60b838ccc465a634e33f1-, p@chr9:122970904..122970907










Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical structure which is the common receptacle for the alimentary canal, Wolffian ducts, oviducts, and the bladder.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.