Personal tools

UBERON:0000163

From FANTOM5_SSTAR

Jump to: navigation, search

Name:embryonic cloaca
Namespace:FANTOM
Definition:"Structure in the development of the urinary and reproductive organs[WP]. endoderm-lined chamber into which the hidgut and allantois empty in early embryos[MP]." [MP:0010115, Wikipedia:Cloaca_(embryology)]
Xrefs:
links:

EHDAA2:0000256
EHDAA:4895
EMAPA:27573

EMAPA:27638
Synonyms: "cloaca" RELATED SENSU []
Comments:compare UBERON:0000162 cloaca

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000162(cloaca),UBERON:0002050(embryonic structure),UBERON:0006554(urinary system structure)
develops_from:UBERON:0003064(intermediate mesoderm)
part_of:UBERON:0000922(embryo),UBERON:0001008(renal system),UBERON:0012361(internal anal region)



Children

part of:UBERON:0000164 (primitive urogenital sinus),UBERON:0009846 (embryonic cloacal epithelium)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000163 (embryonic cloaca), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
4.58e-44FFCP PHASE1:Mm9::chr1:132699659..132699668,+#_e316cf67cdea70cfd5faed19ab5c809ap@chr1:132699659..132699668, +
4.58e-44FFCP PHASE2:Mm9::chr1:132699659..132699668,+#_e316cf67cdea70cfd5faed19ab5c809ap@chr1:132699659..132699668, +
1.7e-39FFCP PHASE1:Mm9::chr9:96425983..96425992,+#_e3e0ddc85fd10543e181f235533b6410p@chr9:96425983..96425992, +
1.7e-39FFCP PHASE2:Mm9::chr15:58237385..58237400,+#_e3e0ddc85fd10543e181f235533b6410p@chr15:58237385..58237400, +
1.7e-39FFCP PHASE2:Mm9::chr7:114836650..114836663,+#_e3e0ddc85fd10543e181f235533b6410p@chr7:114836650..114836663, +
1.7e-39FFCP PHASE1:Mm9::chr15:58237385..58237400,+#_e3e0ddc85fd10543e181f235533b6410p@chr15:58237385..58237400, +
1.7e-39FFCP PHASE1:Mm9::chr7:114836650..114836663,+#_e3e0ddc85fd10543e181f235533b6410p@chr7:114836650..114836663, +
1.7e-39FFCP PHASE2:Mm9::chr9:96425825..96425834,-#_e3e0ddc85fd10543e181f235533b6410p@chr9:96425825..96425834, -
1.7e-39FFCP PHASE1:Mm9::chr9:96425825..96425834,-#_e3e0ddc85fd10543e181f235533b6410p@chr9:96425825..96425834, -
1.7e-39FFCP PHASE2:Mm9::chr9:96425983..96425992,+#_e3e0ddc85fd10543e181f235533b6410p@chr9:96425983..96425992, +
2.66e-39FFCP PHASE1:Mm9::chr7:55028037..55028075,+#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr7:55028037..55028075, +
2.66e-39FFCP PHASE2:Mm9::chr7:28900349..28900364,-#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr7:28900349..28900364, -
2.66e-39FFCP PHASE1:Mm9::chr6:124520368..124520379,+#_074dff01ee6bc89ae62c73e7e0bd01b3p4@C1rb
2.66e-39FFCP PHASE1:Mm9::chr7:28914478..28914498,+#_074dff01ee6bc89ae62c73e7e0bd01b3p3@9530053A07Rik
2.66e-39FFCP PHASE2:Mm9::chr9:120464717..120464741,+#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr9:120464717..120464741, +
2.66e-39FFCP PHASE2:Mm9::chr9:36337031..36337049,-#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr9:36337031..36337049, -
2.66e-39FFCP PHASE1:Mm9::chr7:28922549..28922561,+#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr7:28922549..28922561, +
2.66e-39FFCP PHASE2:Mm9::chr7:55028037..55028075,+#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr7:55028037..55028075, +
2.66e-39FFCP PHASE1:Mm9::chr9:120464717..120464741,+#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr9:120464717..120464741, +
2.66e-39FFCP PHASE1:Mm9::chr5:120136866..120136874,+#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr5:120136866..120136874, +
2.66e-39FFCP PHASE2:Mm9::chr5:120136866..120136874,+#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr5:120136866..120136874, +
2.66e-39FFCP PHASE2:Mm9::chr9:120464756..120464765,+#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr9:120464756..120464765, +
2.66e-39FFCP PHASE2:Mm9::chr6:124520322..124520333,+#_074dff01ee6bc89ae62c73e7e0bd01b3p3@C1rb
2.66e-39FFCP PHASE2:Mm9::chr19:11353922..11353934,-#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr19:11353922..11353934, -
2.66e-39FFCP PHASE1:Mm9::chr19:11353922..11353934,-#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr19:11353922..11353934, -
2.66e-39FFCP PHASE2:Mm9::chr6:124520368..124520379,+#_074dff01ee6bc89ae62c73e7e0bd01b3p4@C1rb
2.66e-39FFCP PHASE2:Mm9::chr7:28924794..28924814,+#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr7:28924794..28924814, +
2.66e-39FFCP PHASE1:Mm9::chr9:120464756..120464765,+#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr9:120464756..120464765, +
2.66e-39FFCP PHASE2:Mm9::chr7:28914450..28914477,+#_074dff01ee6bc89ae62c73e7e0bd01b3p2@9530053A07Rik
2.66e-39FFCP PHASE2:Mm9::chr7:28922549..28922561,+#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr7:28922549..28922561, +
2.66e-39FFCP PHASE1:Mm9::chr6:124520322..124520333,+#_074dff01ee6bc89ae62c73e7e0bd01b3p3@C1rb
2.66e-39FFCP PHASE1:Mm9::chr6:42547567..42547580,-#_074dff01ee6bc89ae62c73e7e0bd01b3p4@Fam115e
2.66e-39FFCP PHASE1:Mm9::chr7:28924794..28924814,+#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr7:28924794..28924814, +
2.66e-39FFCP PHASE1:Mm9::chr9:36337031..36337049,-#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr9:36337031..36337049, -
2.66e-39FFCP PHASE2:Mm9::chr7:28914478..28914498,+#_074dff01ee6bc89ae62c73e7e0bd01b3p3@9530053A07Rik
2.66e-39FFCP PHASE1:Mm9::chr7:28914450..28914477,+#_074dff01ee6bc89ae62c73e7e0bd01b3p2@9530053A07Rik
2.66e-39FFCP PHASE2:Mm9::chr6:42547567..42547580,-#_074dff01ee6bc89ae62c73e7e0bd01b3p4@Fam115e
2.66e-39FFCP PHASE1:Mm9::chr7:28900349..28900364,-#_074dff01ee6bc89ae62c73e7e0bd01b3p@chr7:28900349..28900364, -
2.02e-32FFCP PHASE2:Hg19::chr10:91567075..91567084,+#_6b1e331f45efc4f4c3a4057eba0ce019p@chr10:91567075..91567084, +
2.02e-32FFCP PHASE1:Hg19::chr10:91567053..91567066,+#_6b1e331f45efc4f4c3a4057eba0ce019p@chr10:91567053..91567066, +
2.02e-32FFCP PHASE1:Hg19::chr10:91567075..91567084,+#_6b1e331f45efc4f4c3a4057eba0ce019p@chr10:91567075..91567084, +
2.02e-32FFCP PHASE2:Hg19::chr10:91567053..91567066,+#_6b1e331f45efc4f4c3a4057eba0ce019p@chr10:91567053..91567066, +
4.03e-30FFCP PHASE1:Mm9::chr7:31397780..31397790,-#_6ff33442481e73ce0132f7e10c0ff600p3@Upk1a
4.03e-30FFCP PHASE2:Mm9::chr7:114836670..114836681,+#_6ff33442481e73ce0132f7e10c0ff600p@chr7:114836670..114836681, +
4.03e-30FFCP PHASE2:Mm9::chr14:32955207..32955211,+#_6ff33442481e73ce0132f7e10c0ff600p1@Msmb
4.03e-30FFCP PHASE2:Mm9::chr7:31397780..31397790,-#_6ff33442481e73ce0132f7e10c0ff600p3@Upk1a
4.03e-30FFCP PHASE1:Mm9::chr7:114836670..114836681,+#_6ff33442481e73ce0132f7e10c0ff600p@chr7:114836670..114836681, +
4.03e-30FFCP PHASE1:Mm9::chr3:92288406..92288413,-#_6ff33442481e73ce0132f7e10c0ff600p@chr3:92288406..92288413, -
4.03e-30FFCP PHASE1:Mm9::chr14:32955207..32955211,+#_6ff33442481e73ce0132f7e10c0ff600p1@Msmb
4.03e-30FFCP PHASE2:Mm9::chr3:92288406..92288413,-#_6ff33442481e73ce0132f7e10c0ff600p@chr3:92288406..92288413, -
5.61e-30FFCP PHASE1:Mm9::chr6:122422716..122422728,-#_5ee69073d950a70efac9795692a1081bp15@Rimklb
5.61e-30FFCP PHASE1:Mm9::chr16:20188864..20188875,+#_5ee69073d950a70efac9795692a1081bp@chr16:20188864..20188875, +
5.61e-30FFCP PHASE1:Mm9::chr6:42551847..42551862,-#_5ee69073d950a70efac9795692a1081bp@chr6:42551847..42551862, -
5.61e-30FFCP PHASE1:Mm9::chr15:36485068..36485103,-#_5ee69073d950a70efac9795692a1081bp@chr15:36485068..36485103, -
5.61e-30FFCP PHASE1:Mm9::chr2:80164541..80164545,+#_5ee69073d950a70efac9795692a1081bp@chr2:80164541..80164545, +
5.61e-30FFCP PHASE1:Mm9::chr11:100065595..100065616,-#_5ee69073d950a70efac9795692a1081bp@chr11:100065595..100065616, -
5.61e-30FFCP PHASE2:Mm9::chr10:75355747..75355754,-#_5ee69073d950a70efac9795692a1081bp@chr10:75355747..75355754, -
5.61e-30FFCP PHASE1:Mm9::chr6:42536009..42536044,+#_5ee69073d950a70efac9795692a1081bp@chr6:42536009..42536044, +
5.61e-30FFCP PHASE2:Mm9::chr17:24078882..24078896,+#_5ee69073d950a70efac9795692a1081bp2@Sbp
5.61e-30FFCP PHASE1:Mm9::chr7:123747566..123747567,+#_5ee69073d950a70efac9795692a1081bp@chr7:123747566..123747567, +
5.61e-30FFCP PHASE2:Mm9::chr9:74005044..74005065,+#_5ee69073d950a70efac9795692a1081bp@chr9:74005044..74005065, +
5.61e-30FFCP PHASE2:Mm9::chr4:121069181..121069190,-#_5ee69073d950a70efac9795692a1081bp@chr4:121069181..121069190, -
5.61e-30FFCP PHASE1:Mm9::chr15:101506963..101506974,+#_5ee69073d950a70efac9795692a1081bp@chr15:101506963..101506974, +
5.61e-30FFCP PHASE2:Mm9::chr18:64859665..64859669,+#_5ee69073d950a70efac9795692a1081bp@chr18:64859665..64859669, +
5.61e-30FFCP PHASE2:Mm9::chr11:100108943..100108977,-#_5ee69073d950a70efac9795692a1081bp@chr11:100108943..100108977, -
5.61e-30FFCP PHASE1:Mm9::chr9:122970904..122970907,-#_5ee69073d950a70efac9795692a1081b-, p@chr9:122970904..122970907
5.61e-30FFCP PHASE1:Mm9::chr9:7867982..7867988,-#_5ee69073d950a70efac9795692a1081bp@chr9:7867982..7867988, -
5.61e-30FFCP PHASE1:Mm9::chr6:42535739..42535752,-#_5ee69073d950a70efac9795692a1081bp@chr6:42535739..42535752, -
5.61e-30FFCP PHASE2:Mm9::chr6:42539787..42539797,-#_5ee69073d950a70efac9795692a1081bp@chr6:42539787..42539797, -
5.61e-30FFCP PHASE1:Mm9::chr17:24172292..24172300,+#_5ee69073d950a70efac9795692a1081bp@chr17:24172292..24172300, +
5.61e-30FFCP PHASE2:Mm9::chr15:36485068..36485103,-#_5ee69073d950a70efac9795692a1081bp@chr15:36485068..36485103, -
5.61e-30FFCP PHASE2:Mm9::chr9:36300946..36300953,-#_5ee69073d950a70efac9795692a1081bp@chr9:36300946..36300953, -
5.61e-30FFCP PHASE1:Mm9::chr6:22342065..22342073,-#_5ee69073d950a70efac9795692a1081bp@chr6:22342065..22342073, -
5.61e-30FFCP PHASE2:Mm9::chr11:100065595..100065616,-#_5ee69073d950a70efac9795692a1081bp@chr11:100065595..100065616, -
5.61e-30FFCP PHASE2:Mm9::chr6:42547401..42547411,-#_5ee69073d950a70efac9795692a1081bp9@Fam115e
5.61e-30FFCP PHASE2:Mm9::chr11:89595040..89595050,-#_5ee69073d950a70efac9795692a1081bp@chr11:89595040..89595050, -
5.61e-30FFCP PHASE2:Mm9::chrX:75093387..75093390,-#_5ee69073d950a70efac9795692a1081bp@chrX:75093387..75093390, -
5.61e-30FFCP PHASE1:Mm9::chr16:96752893..96752921,+#_5ee69073d950a70efac9795692a1081bp@chr16:96752893..96752921, +
5.61e-30FFCP PHASE1:Mm9::chr6:42539787..42539797,-#_5ee69073d950a70efac9795692a1081bp@chr6:42539787..42539797, -
5.61e-30FFCP PHASE1:Mm9::chrX:137642090..137642093,-#_5ee69073d950a70efac9795692a1081bp8@Col4a6
5.61e-30FFCP PHASE1:Mm9::chr8:126864466..126864469,+#_5ee69073d950a70efac9795692a1081bp@chr8:126864466..126864469, +
5.61e-30FFCP PHASE1:Mm9::chr6:42548119..42548136,-#_5ee69073d950a70efac9795692a1081bp12@Fam115e
5.61e-30FFCP PHASE1:Mm9::chr11:100108943..100108977,-#_5ee69073d950a70efac9795692a1081bp@chr11:100108943..100108977, -
5.61e-30FFCP PHASE1:Mm9::chr12:114453231..114453265,-#_5ee69073d950a70efac9795692a1081bp@chr12:114453231..114453265, -
5.61e-30FFCP PHASE1:Mm9::chr12:93026806..93026816,-#_5ee69073d950a70efac9795692a1081bp12@Ston2
5.61e-30FFCP PHASE2:Mm9::chr16:20188882..20188884,+#_5ee69073d950a70efac9795692a1081b+, p@chr16:20188882..20188884
5.61e-30FFCP PHASE1:Mm9::chr6:42547389..42547396,-#_5ee69073d950a70efac9795692a1081bp14@Fam115e
5.61e-30FFCP PHASE1:Mm9::chr15:101522998..101523006,-#_5ee69073d950a70efac9795692a1081bp@chr15:101522998..101523006, -
5.61e-30FFCP PHASE1:Mm9::chr9:109794961..109794968,-#_5ee69073d950a70efac9795692a1081bp@chr9:109794961..109794968, -
5.61e-30FFCP PHASE1:Mm9::chr4:121069181..121069190,-#_5ee69073d950a70efac9795692a1081bp@chr4:121069181..121069190, -
5.61e-30FFCP PHASE2:Mm9::chr6:42541927..42541932,-#_5ee69073d950a70efac9795692a1081bp@chr6:42541927..42541932, -
5.61e-30FFCP PHASE1:Mm9::chr9:36341608..36341609,-#_5ee69073d950a70efac9795692a1081bp@chr9:36341608..36341609, -
5.61e-30FFCP PHASE2:Mm9::chr6:42535901..42535907,-#_5ee69073d950a70efac9795692a1081bp@chr6:42535901..42535907, -
5.61e-30FFCP PHASE1:Mm9::chr9:122970758..122970759,+#_5ee69073d950a70efac9795692a1081bp@chr9:122970758..122970759, +
5.61e-30FFCP PHASE2:Mm9::chr6:42536830..42536841,-#_5ee69073d950a70efac9795692a1081bp@chr6:42536830..42536841, -
5.61e-30FFCP PHASE1:Mm9::chr6:42541927..42541932,-#_5ee69073d950a70efac9795692a1081bp@chr6:42541927..42541932, -
5.61e-30FFCP PHASE2:Mm9::chr6:42547300..42547314,-#_5ee69073d950a70efac9795692a1081bp7@Fam115e
5.61e-30FFCP PHASE1:Mm9::chr16:20188882..20188884,+#_5ee69073d950a70efac9795692a1081bp@chr16:20188882..20188884, +
5.61e-30FFCP PHASE2:Mm9::chr7:31388578..31388584,-#_5ee69073d950a70efac9795692a1081bp@chr7:31388578..31388584, -
5.61e-30FFCP PHASE2:Mm9::chr6:42535216..42535225,+#_5ee69073d950a70efac9795692a1081bp@chr6:42535216..42535225, +