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UBERON:0000211

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Name:ligament
Namespace:FANTOM
Definition:"Nonparenchymatous organ that primarily consists of dense connective tissue aggregated into fasciculi by connective tissue. Examples: sutural ligament, radiate sternocostal ligament, ligament of liver, ovarian ligament[FMA]." [FMA:21496, Wikipedia:Ligament]
Xrefs:
links:

EFO:0001966
FMA:21496
galen:Ligament
[1]
MA:0000113
ncithesaurus:Ligament
OpenCyc:Mx4rvVjqpZwpEbGdrcN5Y29ycA
SCTID:182358004
TAO:0001682
VHOG:0001272
XAO:0004031

ZFA:0001675
Synonyms: "ligament organ" EXACT [FMA:21496]
Comments:Note this groups both skeletal and non-skeletal ligaments. What is called a "ligament" in many AOs is actually a skeletal ligament
Subset: uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0007846(dense regular connective tissue)



Children

is a:UBERON:0008846 (skeletal ligament)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000211 (ligament), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


No analysis results










Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of connective tissue that connects bone or cartilage.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.