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UBERON:0000964

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Name:cornea
Namespace:FANTOM
Definition:"transparent front part of the eye that covers the iris, pupil, and anterior chamber. Together with the lens, the cornea refracts light, accounting for approximately two-thirds of the eye's total optical power." [Wikipedia:Cornea]
Xrefs:
links:

AAO:0010344
BTO:0000286
EFO:0000377
EHDAA2:0000316
EHDAA:10199
EMAPA:17161
EV:0100341
FMA:58238
GAID:892
[1]
[ 200px-Schematic_diagram_of_the_human_eye_en.svg.png 200px-Schematic_diagram_of_the_human_eye_en.svg.png]
MA:0000266
MESH:A.09.371.060.217
ncithesaurus:Cornea
OpenCyc:Mx4rvViBa5wpEbGdrcN5Y29ycA
SCTID:181162001
TAO:0000640
VHOG:0000164
XAO:0000180

ZFA:0000640
Synonyms: "tunica cornea" RELATED []
Alt_id: UBERON:FBbt_00004191-FMA_58238-MA_0000266-XAO_0000180-ZFA_0000640
Subset: uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0003102(surface structure),UBERON:0010313(neural crest-derived structure)
develops_from:UBERON:0004348(optic eminence),UBERON:0005427(corneal primordium)
part_of:UBERON:0001801(anterior segment of eyeball),UBERON:0010409(eye surface),UBERON:0012430(tunica fibrosa of eyeball)



Children

part of:CL:0000575 (corneal epithelial cell),UBERON:0001777 (substantia propria of cornea)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000964 (cornea), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
4.67e-66FFCP PHASE1:Hg19::chr17:39023189..39023197,-#_2ff9d1d71947082ce8fe1888ca5fafe8p2@KRT12
4.67e-66FFCP PHASE2:Hg19::chr17:39023189..39023197,-#_2ff9d1d71947082ce8fe1888ca5fafe8p2@KRT12
3.1e-50FFCP PHASE2:Hg19::chr3:52362029..52362031,+#_77abf304917189d16d6d64d5687dd983p@chr3:52362029..52362031, +
3.1e-50FFCP PHASE1:Hg19::chr7:150910973..150910976,-#_77abf304917189d16d6d64d5687dd983p@chr7:150910973..150910976, -
3.1e-50FFCP PHASE2:Hg19::chr7:150910973..150910976,-#_77abf304917189d16d6d64d5687dd983p@chr7:150910973..150910976, -
3.1e-50FFCP PHASE1:Hg19::chr3:52362029..52362031,+#_77abf304917189d16d6d64d5687dd983p@chr3:52362029..52362031, +
3.31e-40FFCP PHASE2:Hg19::chr12:53189894..53189905,-#_90f2e9066280b50b926dc8cdec7f33eap1@KRT3
3.31e-40FFCP PHASE1:Hg19::chr12:53189894..53189905,-#_90f2e9066280b50b926dc8cdec7f33eap1@KRT3
5.98e-34FFCP PHASE1:Hg19::chr22:30144620..30144638,-#_44432c199e26cf85044c5f0732ead873p7@ZMAT5
5.98e-34FFCP PHASE2:Hg19::chr22:30144620..30144638,-#_44432c199e26cf85044c5f0732ead873p7@ZMAT5
1.17e-33FFCP PHASE2:Hg19::chr8:124206334..124206344,+#_454aec2fb3796f540b7085aa35773a06+, p@chr8:124206334..124206344
1.17e-33FFCP PHASE1:Hg19::chr8:124206334..124206344,+#_454aec2fb3796f540b7085aa35773a06+, p@chr8:124206334..124206344
3.16e-29FFCP PHASE1:Hg19::chr7:1600419..1600429,-#_7c2f21565d38af5774fe6d82719c956dp11@TMEM184A
3.16e-29FFCP PHASE2:Hg19::chr7:1600419..1600429,-#_7c2f21565d38af5774fe6d82719c956dp11@TMEM184A
3.16e-29FFCP PHASE2:Hg19::chr1:19403546..19403571,-#_7c2f21565d38af5774fe6d82719c956dp@chr1:19403546..19403571, -
3.16e-29FFCP PHASE1:Hg19::chr1:19403546..19403571,-#_7c2f21565d38af5774fe6d82719c956dp@chr1:19403546..19403571, -
5.61e-29FFCP PHASE1:Hg19::chr12:48164790..48164808,-#_aa717f83d141a7a36f50414d77bc8be5p16@RAPGEF3
5.61e-29FFCP PHASE1:Hg19::chr20:43743762..43743770,-#_aa717f83d141a7a36f50414d77bc8be5p3@WFDC5
5.61e-29FFCP PHASE2:Hg19::chr20:43743762..43743770,-#_aa717f83d141a7a36f50414d77bc8be5p3@WFDC5
5.61e-29FFCP PHASE2:Hg19::chr12:48164790..48164808,-#_aa717f83d141a7a36f50414d77bc8be5p16@RAPGEF3
5.56e-26FFCP PHASE1:Hg19::chr16:3014251..3014254,+#_3a2be84488e7359e2a978f2dfc284e8dp3@KREMEN2
5.56e-26FFCP PHASE2:Hg19::chr16:3014251..3014254,+#_3a2be84488e7359e2a978f2dfc284e8dp3@KREMEN2
6.73e-26FFCP PHASE2:Hg19::chr6:35048829..35048844,+#_c7c1c1821dba5de92fd694c6c4a2489ap@chr6:35048829..35048844, +
6.73e-26FFCP PHASE1:Hg19::chr6:35048829..35048844,+#_c7c1c1821dba5de92fd694c6c4a2489ap@chr6:35048829..35048844, +
7.14e-26FFCP PHASE2:Hg19::chr16:56368957..56368963,+#_cf028f33186ae6d9b8db5c57f6e98c0ep@chr16:56368957..56368963, +
7.14e-26FFCP PHASE2:Hg19::chr8:22932230..22932233,-#_cf028f33186ae6d9b8db5c57f6e98c0ep5@ENST00000520840, p5@ENST00000523806
7.14e-26FFCP PHASE2:Hg19::chr6:113369869..113369877,+#_cf028f33186ae6d9b8db5c57f6e98c0ep@chr6:113369869..113369877, +
7.14e-26FFCP PHASE1:Hg19::chr15:49255230..49255248,-#_cf028f33186ae6d9b8db5c57f6e98c0ep16@SHC4
7.14e-26FFCP PHASE1:Hg19::chr8:22932230..22932233,-#_cf028f33186ae6d9b8db5c57f6e98c0ep5@ENST00000520840, p5@ENST00000523806
7.14e-26FFCP PHASE1:Hg19::chr6:113369869..113369877,+#_cf028f33186ae6d9b8db5c57f6e98c0ep@chr6:113369869..113369877, +
7.14e-26FFCP PHASE2:Hg19::chr10:92617531..92617541,-#_cf028f33186ae6d9b8db5c57f6e98c0ep8@HTR7
7.14e-26FFCP PHASE1:Hg19::chr16:56368957..56368963,+#_cf028f33186ae6d9b8db5c57f6e98c0ep@chr16:56368957..56368963, +
7.14e-26FFCP PHASE2:Hg19::chr15:49255230..49255248,-#_cf028f33186ae6d9b8db5c57f6e98c0ep16@SHC4
7.14e-26FFCP PHASE1:Hg19::chr10:92617531..92617541,-#_cf028f33186ae6d9b8db5c57f6e98c0ep8@HTR7
8.66e-26FFCP PHASE1:Hg19::chr11:67463189..67463193,-#_23e0095269c37215df40651091552277p@chr11:67463189..67463193, -
8.66e-26FFCP PHASE2:Hg19::chr11:67463189..67463193,-#_23e0095269c37215df40651091552277p@chr11:67463189..67463193, -
1.0e-22FFCP PHASE2:Hg19::chr12:46897588..46897603,+#_9b81283dcf9e5cad4b012a567762323ap@chr12:46897588..46897603, +
1.0e-22FFCP PHASE1:Hg19::chr12:46897588..46897603,+#_9b81283dcf9e5cad4b012a567762323ap@chr12:46897588..46897603, +
1.12e-22FFCP PHASE2:Hg19::chr13:20934450..20934456,+#_582f88348edc7fa2eb05e2a0f981118dp@chr13:20934450..20934456, +
1.12e-22FFCP PHASE1:Hg19::chr13:20934450..20934456,+#_582f88348edc7fa2eb05e2a0f981118dp@chr13:20934450..20934456, +
1.25e-22FFCP PHASE1:Hg19::chr19:51538096..51538109,-#_187bf8317fc6de318046bfc96da90f02p5@KLK12
1.25e-22FFCP PHASE2:Hg19::chr19:51538096..51538109,-#_187bf8317fc6de318046bfc96da90f02p5@KLK12
5.17e-21FFCP PHASE1:Hg19::chr10:5529595..5529606,-#_8143d1daf838796b708f9f02e9ba770cp@chr10:5529595..5529606, -
5.17e-21FFCP PHASE2:Hg19::chr10:5529595..5529606,-#_8143d1daf838796b708f9f02e9ba770cp@chr10:5529595..5529606, -
7.74e-21FFCP PHASE2:Hg19::chr19:1249729..1249741,+#_5a005a1696a04d0374cbe1a399944a6ep19@MIDN
7.74e-21FFCP PHASE1:Hg19::chr19:1249729..1249741,+#_5a005a1696a04d0374cbe1a399944a6ep19@MIDN
1.15e-20FFCP PHASE1:Hg19::chr2:131669803..131669810,+#_43dd40ee521bc08db10ea8b2242090ccp@chr2:131669803..131669810, +
1.15e-20FFCP PHASE2:Hg19::chr2:131669803..131669810,+#_43dd40ee521bc08db10ea8b2242090ccp@chr2:131669803..131669810, +
1.28e-20FFCP PHASE2:Hg19::chr9:127212697..127212708,+#_d1ec072a97d7cf595d3a37dd7575d3c5p@chr9:127212697..127212708, +
1.28e-20FFCP PHASE1:Hg19::chr9:127212697..127212708,+#_d1ec072a97d7cf595d3a37dd7575d3c5p@chr9:127212697..127212708, +
1.56e-20FFCP PHASE2:Hg19::chr19:1905001..1905006,+#_43567b9bdefd8bbad845ada59bc40f32p11@SCAMP4
1.56e-20FFCP PHASE1:Hg19::chr19:1905001..1905006,+#_43567b9bdefd8bbad845ada59bc40f32p11@SCAMP4
1.9e-20FFCP PHASE1:Hg19::chr15:72490099..72490109,-#_e3f35f2630b59db25515a127f7617c6cp3@GRAMD2
1.9e-20FFCP PHASE2:Hg19::chr15:72490099..72490109,-#_e3f35f2630b59db25515a127f7617c6cp3@GRAMD2
1.9e-20FFCP PHASE1:Hg19::chr19:50709335..50709346,+#_e3f35f2630b59db25515a127f7617c6cp@chr19:50709335..50709346, +
1.9e-20FFCP PHASE2:Hg19::chr19:50709335..50709346,+#_e3f35f2630b59db25515a127f7617c6cp@chr19:50709335..50709346, +
2.76e-19FFCP PHASE2:Hg19::chr20:25176603..25176614,+#_785092416293ee0de4acf6a3e5ec9e85p@chr20:25176603..25176614, +
2.76e-19FFCP PHASE1:Hg19::chr20:25176603..25176614,+#_785092416293ee0de4acf6a3e5ec9e85p@chr20:25176603..25176614, +
6.77e-19FFCP PHASE1:Hg19::chr19:44306567..44306574,-#_f92c0443675481ca40d04d3c56a32e65p7@LYPD5
6.77e-19FFCP PHASE2:Hg19::chr19:44306567..44306574,-#_f92c0443675481ca40d04d3c56a32e65p7@LYPD5
8.88e-19FFCP PHASE1:Hg19::chr2:28853455..28853476,+#_8b5058e032517c667938c909de34d205p@chr2:28853455..28853476, +
8.88e-19FFCP PHASE2:Hg19::chr2:28853455..28853476,+#_8b5058e032517c667938c909de34d205p@chr2:28853455..28853476, +
9.72e-19FFCP PHASE1:Hg19::chr20:42816206..42816211,-#_74814023178a882a480104b00ddc842cp8@JPH2
9.72e-19FFCP PHASE1:Hg19::chr19:51538121..51538134,-#_74814023178a882a480104b00ddc842cp4@KLK12
9.72e-19FFCP PHASE2:Hg19::chr20:42816206..42816211,-#_74814023178a882a480104b00ddc842cp8@JPH2
9.72e-19FFCP PHASE2:Hg19::chr19:51538121..51538134,-#_74814023178a882a480104b00ddc842cp4@KLK12
8.69e-18FFCP PHASE2:Hg19::chr21:47410794..47410799,+#_c2238a2135fd215c2ed4656e3c2cda1bp@chr21:47410794..47410799, +
8.69e-18FFCP PHASE2:Hg19::chr6:151770193..151770196,-#_c2238a2135fd215c2ed4656e3c2cda1bp@chr6:151770193..151770196, -
8.69e-18FFCP PHASE1:Hg19::chr5:59064162..59064173,-#_c2238a2135fd215c2ed4656e3c2cda1bp72@PDE4D
8.69e-18FFCP PHASE1:Hg19::chr1:44820685..44820695,-#_c2238a2135fd215c2ed4656e3c2cda1bp10@ERI3
8.69e-18FFCP PHASE2:Hg19::chr3:124535316..124535340,+#_c2238a2135fd215c2ed4656e3c2cda1bp@chr3:124535316..124535340, +
8.69e-18FFCP PHASE1:Hg19::chr21:47410794..47410799,+#_c2238a2135fd215c2ed4656e3c2cda1bp@chr21:47410794..47410799, +
8.69e-18FFCP PHASE1:Hg19::chr6:151770193..151770196,-#_c2238a2135fd215c2ed4656e3c2cda1bp@chr6:151770193..151770196, -
8.69e-18FFCP PHASE2:Hg19::chr5:59064162..59064173,-#_c2238a2135fd215c2ed4656e3c2cda1bp72@PDE4D
8.69e-18FFCP PHASE2:Hg19::chr1:44820685..44820695,-#_c2238a2135fd215c2ed4656e3c2cda1bp10@ERI3
8.69e-18FFCP PHASE1:Hg19::chr3:124535316..124535340,+#_c2238a2135fd215c2ed4656e3c2cda1bp@chr3:124535316..124535340, +
1.03e-17FFCP PHASE2:Hg19::chr10:74020629..74020634,-#_9a2dec9f3250d4e9ffb8b5f4a4df71afp@chr10:74020629..74020634, -
1.03e-17FFCP PHASE1:Hg19::chr5:79375654..79375674,+#_9a2dec9f3250d4e9ffb8b5f4a4df71afp@chr5:79375654..79375674, +
1.03e-17FFCP PHASE2:Hg19::chr2:25383828..25383855,-#_9a2dec9f3250d4e9ffb8b5f4a4df71afp4@POMC
1.03e-17FFCP PHASE2:Hg19::chr5:79375654..79375674,+#_9a2dec9f3250d4e9ffb8b5f4a4df71afp@chr5:79375654..79375674, +
1.03e-17FFCP PHASE1:Hg19::chr15:101459410..101459421,-#_9a2dec9f3250d4e9ffb8b5f4a4df71afp2@ENST00000560068
1.03e-17FFCP PHASE2:Hg19::chr10:43133595..43133606,-#_9a2dec9f3250d4e9ffb8b5f4a4df71afp@chr10:43133595..43133606, -
1.03e-17FFCP PHASE2:Hg19::chr11:65265332..65265342,+#_9a2dec9f3250d4e9ffb8b5f4a4df71afp19@MALAT1
1.03e-17FFCP PHASE2:Hg19::chr1:9970194..9970195,-#_9a2dec9f3250d4e9ffb8b5f4a4df71afp14@CTNNBIP1
1.03e-17FFCP PHASE1:Hg19::chr2:25383828..25383855,-#_9a2dec9f3250d4e9ffb8b5f4a4df71afp4@POMC
1.03e-17FFCP PHASE1:Hg19::chr10:74020629..74020634,-#_9a2dec9f3250d4e9ffb8b5f4a4df71afp@chr10:74020629..74020634, -
1.03e-17FFCP PHASE2:Hg19::chr15:101459410..101459421,-#_9a2dec9f3250d4e9ffb8b5f4a4df71afp2@ENST00000560068
1.03e-17FFCP PHASE1:Hg19::chr10:43133595..43133606,-#_9a2dec9f3250d4e9ffb8b5f4a4df71afp@chr10:43133595..43133606, -
1.03e-17FFCP PHASE1:Hg19::chr11:65265332..65265342,+#_9a2dec9f3250d4e9ffb8b5f4a4df71afp19@MALAT1
1.03e-17FFCP PHASE1:Hg19::chr1:9970194..9970195,-#_9a2dec9f3250d4e9ffb8b5f4a4df71afp14@CTNNBIP1
2.59e-17FFCP PHASE2:Hg19::chr11:119039069..119039081,+#_2b76838760449956aa988ca81ac472dcp9@NLRX1
2.59e-17FFCP PHASE1:Hg19::chr11:119039069..119039081,+#_2b76838760449956aa988ca81ac472dcp9@NLRX1
2.09e-16FFCP PHASE2:Hg19::chr12:48164812..48164829,-#_a550ddda99cacfc54aa3c677c458e366p14@RAPGEF3
2.09e-16FFCP PHASE1:Hg19::chr12:48164812..48164829,-#_a550ddda99cacfc54aa3c677c458e366p14@RAPGEF3
2.64e-16FFCP PHASE1:Hg19::chr2:131669791..131669801,+#_6d42fb43dd4871154b951938ef7ac4f8p@chr2:131669791..131669801, +
2.64e-16FFCP PHASE2:Hg19::chr2:131669791..131669801,+#_6d42fb43dd4871154b951938ef7ac4f8p@chr2:131669791..131669801, +
3.32e-16FFCP PHASE2:Hg19::chr17:39742822..39742850,+#_61101da35bc3b1dfeffbf9f2af0610e9p@chr17:39742822..39742850, +
3.32e-16FFCP PHASE1:Hg19::chr17:39742822..39742850,+#_61101da35bc3b1dfeffbf9f2af0610e9p@chr17:39742822..39742850, +
3.59e-16FFCP PHASE1:Hg19::chr1:3591362..3591369,-#_735ed739ce41036349fd4dc68a56000dp@chr1:3591362..3591369, -
3.59e-16FFCP PHASE2:Hg19::chr1:3591362..3591369,-#_735ed739ce41036349fd4dc68a56000dp@chr1:3591362..3591369, -