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UBERON:0001020

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Name:nervous system commissure
Namespace:FANTOM
Definition:"White matter fiber bundle that crosses the midline of the brain or spinal cord[NIF]. The transverse connection between two longitudinal parts, e.g. nerves, tracheae. In the context of Drosophila refers to a broad band of axons connecting the same neuropils each side of the brain[FBbt]." ISBN:3110148986, Wikipedia:Commissure
Xrefs:
links:

FBbt:00005103
FMA:83906
ncithesaurus:Commissure
NIF_GrossAnatomy:nlx_anat_20090513
OpenCyc:Mx4rdBrmE6gOEdudWQACs5b6Bw

TADS:0000201
Synonyms: "commissure of neuraxis" EXACT [FMA:83906]
"neuraxis commissure" EXACT [FMA:83906]
Comments:*not* the same as FMA:76741 Commissure
Alt_id: UBERON:FBbt_00005103-FMA_76741
Subset: uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0001018(axon tract)



Children

is a:UBERON:0005970 (brain commissure)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001020 (nervous system commissure), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr17:73689469..73689476,-#_99cbc12aaefe64a0a7d64e32b55fa410p@chr17:73689469..73689476, -
5.42e-195FFCP PHASE1:Hg19::chr14:36462819..36462832,+#_99cbc12aaefe64a0a7d64e32b55fa410p@chr14:36462819..36462832, +
5.42e-195FFCP PHASE1:Hg19::chr5:60927228..60927236,-#_99cbc12aaefe64a0a7d64e32b55fa410p3@BC032909, p3@BC032910
5.42e-195FFCP PHASE2:Hg19::chr15:93827399..93827403,+#_99cbc12aaefe64a0a7d64e32b55fa410p@chr15:93827399..93827403, +
5.42e-195FFCP PHASE2:Hg19::chr5:60927228..60927236,-#_99cbc12aaefe64a0a7d64e32b55fa410p3@BC032909, p3@BC032910
5.42e-195FFCP PHASE1:Hg19::chr15:93827399..93827403,+#_99cbc12aaefe64a0a7d64e32b55fa410p@chr15:93827399..93827403, +
5.42e-195FFCP PHASE2:Hg19::chr14:36462819..36462832,+#_99cbc12aaefe64a0a7d64e32b55fa410p@chr14:36462819..36462832, +
5.42e-195FFCP PHASE1:Hg19::chr17:73689469..73689476,-#_99cbc12aaefe64a0a7d64e32b55fa410-, p@chr17:73689469..73689476
9.37e-99FFCP PHASE1:Hg19::chr14:33926303..33926307,-#_53fb775105d59488b918110de4540133p@chr14:33926303..33926307, -
9.37e-99FFCP PHASE1:Hg19::chr12:78359873..78359882,+#_53fb775105d59488b918110de4540133p41@NAV3
9.37e-99FFCP PHASE2:Hg19::chr12:78359873..78359882,+#_53fb775105d59488b918110de4540133p41@NAV3
9.37e-99FFCP PHASE2:Hg19::chr14:33926303..33926307,-#_53fb775105d59488b918110de4540133p@chr14:33926303..33926307, -
9.37e-99FFCP PHASE2:Hg19::chr2:232548018..232548022,-#_53fb775105d59488b918110de4540133p@chr2:232548018..232548022, -
9.37e-99FFCP PHASE1:Hg19::chr11:110248322..110248329,-#_53fb775105d59488b918110de4540133p@chr11:110248322..110248329, -
9.37e-99FFCP PHASE1:Hg19::chr2:232548018..232548022,-#_53fb775105d59488b918110de4540133p@chr2:232548018..232548022, -
9.37e-99FFCP PHASE2:Hg19::chr11:110248322..110248329,-#_53fb775105d59488b918110de4540133p@chr11:110248322..110248329, -
2.55e-98FFCP PHASE2:Hg19::chr3:15374659..15374696,-#_04aa6881cf657bbfcc1f4bfd6214a9c3p10@SH3BP5
2.55e-98FFCP PHASE1:Hg19::chr3:15374659..15374696,-#_04aa6881cf657bbfcc1f4bfd6214a9c3p10@SH3BP5
2.55e-98FFCP PHASE1:Hg19::chr19:35788742..35788752,+#_04aa6881cf657bbfcc1f4bfd6214a9c3p@chr19:35788742..35788752, +
2.55e-98FFCP PHASE2:Hg19::chr19:35788742..35788752,+#_04aa6881cf657bbfcc1f4bfd6214a9c3p@chr19:35788742..35788752, +
1.23e-66FFCP PHASE1:Hg19::chr10:73479518..73479527,-#_1d1a42a686a1a0dd0dd9cd64dbf109f5p5@C10orf105
1.23e-66FFCP PHASE2:Hg19::chr10:73479518..73479527,-#_1d1a42a686a1a0dd0dd9cd64dbf109f5p5@C10orf105
1.23e-66FFCP PHASE1:Hg19::chr7:124391226..124391235,-#_1d1a42a686a1a0dd0dd9cd64dbf109f5p@chr7:124391226..124391235, -
1.23e-66FFCP PHASE1:Hg19::chr17:72823919..72823924,-#_1d1a42a686a1a0dd0dd9cd64dbf109f5p@chr17:72823919..72823924, -
1.23e-66FFCP PHASE1:Hg19::chr8:42037488..42037504,+#_1d1a42a686a1a0dd0dd9cd64dbf109f5p@chr8:42037488..42037504, +
1.23e-66FFCP PHASE1:Hg19::chr12:78359680..78359686,+#_1d1a42a686a1a0dd0dd9cd64dbf109f5p32@NAV3
1.23e-66FFCP PHASE2:Hg19::chr12:78359680..78359686,+#_1d1a42a686a1a0dd0dd9cd64dbf109f5p32@NAV3
1.23e-66FFCP PHASE2:Hg19::chr8:42037488..42037504,+#_1d1a42a686a1a0dd0dd9cd64dbf109f5p@chr8:42037488..42037504, +
1.23e-66FFCP PHASE2:Hg19::chr7:124391226..124391235,-#_1d1a42a686a1a0dd0dd9cd64dbf109f5p@chr7:124391226..124391235, -
1.23e-66FFCP PHASE2:Hg19::chr17:72823919..72823924,-#_1d1a42a686a1a0dd0dd9cd64dbf109f5-, p@chr17:72823919..72823924
2.39e-66FFCP PHASE1:Hg19::chr10:61043452..61043467,-#_d20b12d9defa295b6e7e9b5f929ffbb8p16@FAM13C
2.39e-66FFCP PHASE1:Hg19::chr10:25012236..25012245,-#_d20b12d9defa295b6e7e9b5f929ffbb8p24@ARHGAP21
2.39e-66FFCP PHASE2:Hg19::chr10:61043452..61043467,-#_d20b12d9defa295b6e7e9b5f929ffbb8p16@FAM13C
2.39e-66FFCP PHASE2:Hg19::chr6:163681762..163681767,+#_d20b12d9defa295b6e7e9b5f929ffbb8p@chr6:163681762..163681767, +
2.39e-66FFCP PHASE1:Hg19::chr6:163681762..163681767,+#_d20b12d9defa295b6e7e9b5f929ffbb8p@chr6:163681762..163681767, +
2.39e-66FFCP PHASE2:Hg19::chr10:25012236..25012245,-#_d20b12d9defa295b6e7e9b5f929ffbb8p24@ARHGAP21
4.66e-66FFCP PHASE2:Hg19::chr13:99135698..99135706,+#_5a5cf6e49d9fcdd927d4c0bc0f60079ep@chr13:99135698..99135706, +
4.66e-66FFCP PHASE1:Hg19::chr14:91199850..91199861,-#_5a5cf6e49d9fcdd927d4c0bc0f60079ep@chr14:91199850..91199861, -
4.66e-66FFCP PHASE2:Hg19::chr7:129012882..129012891,-#_5a5cf6e49d9fcdd927d4c0bc0f60079ep@chr7:129012882..129012891, -
4.66e-66FFCP PHASE1:Hg19::chr13:99135698..99135706,+#_5a5cf6e49d9fcdd927d4c0bc0f60079ep@chr13:99135698..99135706, +
4.66e-66FFCP PHASE2:Hg19::chr4:645709..645712,+#_5a5cf6e49d9fcdd927d4c0bc0f60079ep15@PDE6B
4.66e-66FFCP PHASE2:Hg19::chr5:35089799..35089804,-#_5a5cf6e49d9fcdd927d4c0bc0f60079ep20@PRLR
4.66e-66FFCP PHASE1:Hg19::chr4:174293011..174293022,-#_5a5cf6e49d9fcdd927d4c0bc0f60079ep@chr4:174293011..174293022, -
4.66e-66FFCP PHASE1:Hg19::chr4:645709..645712,+#_5a5cf6e49d9fcdd927d4c0bc0f60079ep15@PDE6B
4.66e-66FFCP PHASE2:Hg19::chr5:35089832..35089839,-#_5a5cf6e49d9fcdd927d4c0bc0f60079ep26@PRLR
4.66e-66FFCP PHASE1:Hg19::chr8:101522298..101522305,-#_5a5cf6e49d9fcdd927d4c0bc0f60079ep@chr8:101522298..101522305, -
4.66e-66FFCP PHASE2:Hg19::chr4:174293011..174293022,-#_5a5cf6e49d9fcdd927d4c0bc0f60079e-, p@chr4:174293011..174293022
4.66e-66FFCP PHASE1:Hg19::chr7:129015806..129015815,+#_5a5cf6e49d9fcdd927d4c0bc0f60079ep@chr7:129015806..129015815, +
4.66e-66FFCP PHASE1:Hg19::chr5:35089799..35089804,-#_5a5cf6e49d9fcdd927d4c0bc0f60079ep20@PRLR
4.66e-66FFCP PHASE1:Hg19::chr17:40120071..40120085,+#_5a5cf6e49d9fcdd927d4c0bc0f60079ep15@CNP
4.66e-66FFCP PHASE1:Hg19::chr7:129012882..129012891,-#_5a5cf6e49d9fcdd927d4c0bc0f60079ep@chr7:129012882..129012891, -
4.66e-66FFCP PHASE2:Hg19::chr8:101522298..101522305,-#_5a5cf6e49d9fcdd927d4c0bc0f60079ep@chr8:101522298..101522305, -
4.66e-66FFCP PHASE1:Hg19::chr5:35089832..35089839,-#_5a5cf6e49d9fcdd927d4c0bc0f60079ep26@PRLR
4.66e-66FFCP PHASE2:Hg19::chr17:40120071..40120085,+#_5a5cf6e49d9fcdd927d4c0bc0f60079ep15@CNP
4.66e-66FFCP PHASE2:Hg19::chr7:129015806..129015815,+#_5a5cf6e49d9fcdd927d4c0bc0f60079ep@chr7:129015806..129015815, +
4.66e-66FFCP PHASE2:Hg19::chr14:91199850..91199861,-#_5a5cf6e49d9fcdd927d4c0bc0f60079ep@chr14:91199850..91199861, -
1.46e-50FFCP PHASE1:Hg19::chr6:170571770..170571782,-#_af81898a99a0086591fba8c445b6717cp2@LOC154449
1.46e-50FFCP PHASE2:Hg19::chr6:170571770..170571782,-#_af81898a99a0086591fba8c445b6717cp2@LOC154449
2.42e-50FFCP PHASE2:Hg19::chr11:133996343..133996351,+#_45ef571d4b45d257f2658976d630002dp8@JAM3
2.42e-50FFCP PHASE2:Hg19::chrX:103031196..103031205,-#_45ef571d4b45d257f2658976d630002dp@chrX:103031196..103031205, -
2.42e-50FFCP PHASE1:Hg19::chr19:15751984..15751994,+#_45ef571d4b45d257f2658976d630002dp6@CYP4F3
2.42e-50FFCP PHASE1:Hg19::chr12:106697974..106697990,-#_45ef571d4b45d257f2658976d630002dp31@CKAP4
2.42e-50FFCP PHASE2:Hg19::chr7:30202318..30202329,+#_45ef571d4b45d257f2658976d630002dp@chr7:30202318..30202329, +
2.42e-50FFCP PHASE1:Hg19::chr10:7454514..7454525,-#_45ef571d4b45d257f2658976d630002dp@chr10:7454514..7454525, -
2.42e-50FFCP PHASE2:Hg19::chr4:74005833..74005844,-#_45ef571d4b45d257f2658976d630002dp@chr4:74005833..74005844, -
2.42e-50FFCP PHASE1:Hg19::chrX:103031196..103031205,-#_45ef571d4b45d257f2658976d630002dp@chrX:103031196..103031205, -
2.42e-50FFCP PHASE2:Hg19::chr10:7454514..7454525,-#_45ef571d4b45d257f2658976d630002dp@chr10:7454514..7454525, -
2.42e-50FFCP PHASE1:Hg19::chr7:30202318..30202329,+#_45ef571d4b45d257f2658976d630002dp@chr7:30202318..30202329, +
2.42e-50FFCP PHASE1:Hg19::chr4:74005833..74005844,-#_45ef571d4b45d257f2658976d630002dp@chr4:74005833..74005844, -
2.42e-50FFCP PHASE1:Hg19::chr11:133996343..133996351,+#_45ef571d4b45d257f2658976d630002dp8@JAM3
2.42e-50FFCP PHASE2:Hg19::chr12:106697974..106697990,-#_45ef571d4b45d257f2658976d630002dp31@CKAP4
2.42e-50FFCP PHASE2:Hg19::chr19:15751984..15751994,+#_45ef571d4b45d257f2658976d630002dp6@CYP4F3
3.99e-50FFCP PHASE2:Hg19::chr6:164364681..164364684,-#_609ed87f440c20869f0dedb19e68a9edp@chr6:164364681..164364684, -
3.99e-50FFCP PHASE1:Hg19::chr6:164364681..164364684,-#_609ed87f440c20869f0dedb19e68a9edp@chr6:164364681..164364684, -
3.99e-50FFCP PHASE1:Hg19::chr11:45922629..45922637,+#_609ed87f440c20869f0dedb19e68a9edp@chr11:45922629..45922637, +
3.99e-50FFCP PHASE2:Hg19::chr9:20927844..20927855,+#_609ed87f440c20869f0dedb19e68a9edp@chr9:20927844..20927855, +
3.99e-50FFCP PHASE1:Hg19::chr3:160203278..160203289,-#_609ed87f440c20869f0dedb19e68a9edp8@TRIM59
3.99e-50FFCP PHASE2:Hg19::chr3:160203278..160203289,-#_609ed87f440c20869f0dedb19e68a9edp8@TRIM59
3.99e-50FFCP PHASE2:Hg19::chr11:45922629..45922637,+#_609ed87f440c20869f0dedb19e68a9edp@chr11:45922629..45922637, +
3.99e-50FFCP PHASE2:Hg19::chr17:36726052..36726061,-#_609ed87f440c20869f0dedb19e68a9edp@chr17:36726052..36726061, -
3.99e-50FFCP PHASE1:Hg19::chr17:36726052..36726061,-#_609ed87f440c20869f0dedb19e68a9edp@chr17:36726052..36726061, -
3.99e-50FFCP PHASE1:Hg19::chr9:20927844..20927855,+#_609ed87f440c20869f0dedb19e68a9edp@chr9:20927844..20927855, +
6.58e-50FFCP PHASE2:Hg19::chrX:28605300..28605301,+#_a20fd07cee0d65d08f163224e72f8a5dp8@IL1RAPL1
6.58e-50FFCP PHASE2:Hg19::chr12:99288459..99288464,-#_a20fd07cee0d65d08f163224e72f8a5dp38@ANKS1B
6.58e-50FFCP PHASE2:Hg19::chr11:117585539..117585541,-#_a20fd07cee0d65d08f163224e72f8a5dp@chr11:117585539..117585541, -
6.58e-50FFCP PHASE2:Hg19::chr11:67190503..67190512,+#_a20fd07cee0d65d08f163224e72f8a5dp8@CARNS1
6.58e-50FFCP PHASE1:Hg19::chr9:112191163..112191174,-#_a20fd07cee0d65d08f163224e72f8a5dp10@PTPN3
6.58e-50FFCP PHASE1:Hg19::chr3:190578500..190578506,-#_a20fd07cee0d65d08f163224e72f8a5dp@chr3:190578500..190578506, -
6.58e-50FFCP PHASE1:Hg19::chr3:10706167..10706179,-#_a20fd07cee0d65d08f163224e72f8a5dp@chr3:10706167..10706179, -
6.58e-50FFCP PHASE2:Hg19::chr3:190578500..190578506,-#_a20fd07cee0d65d08f163224e72f8a5dp@chr3:190578500..190578506, -
6.58e-50FFCP PHASE2:Hg19::chr4:7412700..7412704,+#_a20fd07cee0d65d08f163224e72f8a5dp@chr4:7412700..7412704, +
6.58e-50FFCP PHASE1:Hg19::chr11:67190503..67190512,+#_a20fd07cee0d65d08f163224e72f8a5dp8@CARNS1
6.58e-50FFCP PHASE1:Hg19::chr6:133119649..133119655,-#_a20fd07cee0d65d08f163224e72f8a5dp6@C6orf192
6.58e-50FFCP PHASE1:Hg19::chr12:99288459..99288464,-#_a20fd07cee0d65d08f163224e72f8a5dp38@ANKS1B
6.58e-50FFCP PHASE2:Hg19::chr3:10706167..10706179,-#_a20fd07cee0d65d08f163224e72f8a5dp@chr3:10706167..10706179, -
6.58e-50FFCP PHASE2:Hg19::chr2:219610931..219610941,+#_a20fd07cee0d65d08f163224e72f8a5dp13@TTLL4
6.58e-50FFCP PHASE1:Hg19::chr2:219610931..219610941,+#_a20fd07cee0d65d08f163224e72f8a5dp13@TTLL4
6.58e-50FFCP PHASE2:Hg19::chr9:112191163..112191174,-#_a20fd07cee0d65d08f163224e72f8a5dp10@PTPN3
6.58e-50FFCP PHASE1:Hg19::chr11:117585539..117585541,-#_a20fd07cee0d65d08f163224e72f8a5dp@chr11:117585539..117585541, -
6.58e-50FFCP PHASE1:Hg19::chr4:7412700..7412704,+#_a20fd07cee0d65d08f163224e72f8a5dp@chr4:7412700..7412704, +