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UBERON:0001052

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Name:rectum
Namespace:FANTOM
Definition:"the final straight portion of the large intestine in some mammals, and the gut in others, terminating in the anus[WP]." [BTO:0001158, Wikipedia:Rectum]
Xrefs:
links:

AAO:0010401
BTO:0001158
EFO:0000848
EHDAA2:0001592
EHDAA:5836
EMAPA:17896
EMAPA:18925
EV:0100081
FMA:14544
GAID:311
galen:Rectum
[1]
[2]
MA:0000336
MAT:0000050
MESH:A.03.492.411.495.767
MIAA:0000050
ncithesaurus:Rectum
OpenCyc:Mx4rvVjaU5wpEbGdrcN5Y29ycA
SCTID:181261002
VHOG:0000427
WBbt:0005773

XAO:0000238
Synonyms: "intestinum rectum" RELATED [BTO:0001158]
"rectal sac" RELATED []
Comments:Taxon notes: In the lungfish, sharks and rays the rectum opens into the cloaca which also receives wastes (urine) from the kidneys and material from the reproductive organs. In bony fish the rectum reaches the outside environment through the anus, which is normally situated just in front the urinary and reproductive openings. However in some fish the digestive tract may be curled back on itself, and in the Electric Eel (Electrophorus electricus) the anus is situated in the fish's throat. -- http://www.earthlife.net/fish/digestion.html
Alt_id: UBERON:FBbt_00005756-FMA_14544-MA_0000336-MIAA_0000050-WBbt_0005773-XAO_0000238
Subset: uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0004921(subdivision of digestive tract)
develops_from:UBERON:0001046(hindgut)
part_of:UBERON:0000059(large intestine),UBERON:0006866(terminal part of digestive tract),UBERON:0012361(internal anal region)



Children

is a:FF:0010208 (rectum - adult)
derives from:FF:0010067 (human rectum - fetal sample),FF:0101532 (rectal cancer cell line sample)
part of:FF:0010067 (human rectum - fetal sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001052 (rectum), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr18:28860939..28860953,-#_b71b4f188c38c1a4b32cfefeb7ca6346p@chr18:28860939..28860953, -
1.55e-98FFCP PHASE1:Hg19::chr18:28860939..28860953,-#_b71b4f188c38c1a4b32cfefeb7ca6346p@chr18:28860939..28860953, -
4.67e-66FFCP PHASE1:Hg19::chr6:150777673..150777685,-#_120d0ac52f8604225083a0acc02c09a0p@chr6:150777673..150777685, -
4.67e-66FFCP PHASE2:Hg19::chr6:150777673..150777685,-#_120d0ac52f8604225083a0acc02c09a0p@chr6:150777673..150777685, -
3.1e-50FFCP PHASE2:Hg19::chr8:127449395..127449424,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr8:127449395..127449424, +
3.1e-50FFCP PHASE1:Hg19::chr6:8446968..8446983,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr6:8446968..8446983, +
3.1e-50FFCP PHASE2:Hg19::chr3:139373728..139373733,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr3:139373728..139373733, +
3.1e-50FFCP PHASE2:Hg19::chr13:54830821..54830841,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr13:54830821..54830841, +
3.1e-50FFCP PHASE2:Hg19::chr6:104674708..104674749,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr6:104674708..104674749, -
3.1e-50FFCP PHASE2:Hg19::chr1:93128331..93128338,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr1:93128331..93128338, -
3.1e-50FFCP PHASE1:Hg19::chr1:118658073..118658082,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr1:118658073..118658082, -
3.1e-50FFCP PHASE1:Hg19::chr1:163338283..163338286,+#_80131c3ac5a106b7cfe232e3f05959b9+, p@chr1:163338283..163338286
3.1e-50FFCP PHASE2:Hg19::chrX:42162203..42162241,+#_80131c3ac5a106b7cfe232e3f05959b9p@chrX:42162203..42162241, +
3.1e-50FFCP PHASE2:Hg19::chr8:128415944..128415958,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr8:128415944..128415958, +
3.1e-50FFCP PHASE2:Hg19::chr13:46093198..46093203,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr13:46093198..46093203, +
3.1e-50FFCP PHASE1:Hg19::chr8:127438794..127438800,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr8:127438794..127438800, +
3.1e-50FFCP PHASE1:Hg19::chr15:45950558..45950561,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr15:45950558..45950561, +
3.1e-50FFCP PHASE1:Hg19::chr8:99425711..99425716,-#_80131c3ac5a106b7cfe232e3f05959b9p1@ENST00000518956
3.1e-50FFCP PHASE1:Hg19::chr7:87232440..87232448,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr7:87232440..87232448, -
3.1e-50FFCP PHASE2:Hg19::chr3:185823573..185823578,-#_80131c3ac5a106b7cfe232e3f05959b9p26@ETV5
3.1e-50FFCP PHASE1:Hg19::chr2:163302793..163302800,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr2:163302793..163302800, -
3.1e-50FFCP PHASE2:Hg19::chr12:65466889..65466894,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr12:65466889..65466894, -
3.1e-50FFCP PHASE1:Hg19::chr10:24726466..24726472,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr10:24726466..24726472, +
3.1e-50FFCP PHASE1:Hg19::chr4:157174108..157174136,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr4:157174108..157174136, +
3.1e-50FFCP PHASE1:Hg19::chr3:140054665..140054678,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr3:140054665..140054678, -
3.1e-50FFCP PHASE1:Hg19::chr14:76289395..76289406,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr14:76289395..76289406, +
3.1e-50FFCP PHASE2:Hg19::chr3:148165064..148165071,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr3:148165064..148165071, -
3.1e-50FFCP PHASE1:Hg19::chr8:128260156..128260173,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr8:128260156..128260173, +
3.1e-50FFCP PHASE2:Hg19::chr10:24726466..24726472,+#_80131c3ac5a106b7cfe232e3f05959b9+, p@chr10:24726466..24726472
3.1e-50FFCP PHASE1:Hg19::chr12:68155058..68155064,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr12:68155058..68155064, -
3.1e-50FFCP PHASE2:Hg19::chr7:30499737..30499761,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr7:30499737..30499761, +
3.1e-50FFCP PHASE2:Hg19::chr6:31683061..31683070,+#_80131c3ac5a106b7cfe232e3f05959b9p5@LY6G6D
3.1e-50FFCP PHASE1:Hg19::chr2:19707156..19707203,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr2:19707156..19707203, +
3.1e-50FFCP PHASE2:Hg19::chr7:87049573..87049608,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr7:87049573..87049608, -
3.1e-50FFCP PHASE1:Hg19::chr8:127817393..127817400,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr8:127817393..127817400, +
3.1e-50FFCP PHASE2:Hg19::chr7:97958802..97958804,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr7:97958802..97958804, -
3.1e-50FFCP PHASE2:Hg19::chr15:45950558..45950561,+#_80131c3ac5a106b7cfe232e3f05959b9+, p@chr15:45950558..45950561
3.1e-50FFCP PHASE1:Hg19::chr7:138064518..138064531,-#_80131c3ac5a106b7cfe232e3f05959b9-, p@chr7:138064518..138064531
3.1e-50FFCP PHASE2:Hg19::chr8:128419359..128419367,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr8:128419359..128419367, -
3.1e-50FFCP PHASE2:Hg19::chr1:78621016..78621042,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr1:78621016..78621042, +
3.1e-50FFCP PHASE1:Hg19::chr12:31632584..31632589,-#_80131c3ac5a106b7cfe232e3f05959b9p20@DENND5B
3.1e-50FFCP PHASE1:Hg19::chr9:104610923..104610939,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr9:104610923..104610939, -
3.1e-50FFCP PHASE2:Hg19::chr3:171088092..171088113,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr3:171088092..171088113, -
3.1e-50FFCP PHASE1:Hg19::chr3:66354424..66354472,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr3:66354424..66354472, +
3.1e-50FFCP PHASE2:Hg19::chr13:110258158..110258170,-#_80131c3ac5a106b7cfe232e3f05959b9-, p@chr13:110258158..110258170
3.1e-50FFCP PHASE2:Hg19::chr8:128259602..128259609,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr8:128259602..128259609, -
3.1e-50FFCP PHASE2:Hg19::chr2:163302793..163302800,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr2:163302793..163302800, -
3.1e-50FFCP PHASE2:Hg19::chr7:138064518..138064531,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr7:138064518..138064531, -
3.1e-50FFCP PHASE1:Hg19::chr4:71222797..71222807,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr4:71222797..71222807, +
3.1e-50FFCP PHASE2:Hg19::chr21:37143915..37143924,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr21:37143915..37143924, -
3.1e-50FFCP PHASE2:Hg19::chr4:157174108..157174136,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr4:157174108..157174136, +
3.1e-50FFCP PHASE1:Hg19::chr16:19661615..19661621,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr16:19661615..19661621, +
3.1e-50FFCP PHASE2:Hg19::chr15:60749901..60749904,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr15:60749901..60749904, -
3.1e-50FFCP PHASE2:Hg19::chr6:8446968..8446983,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr6:8446968..8446983, +
3.1e-50FFCP PHASE2:Hg19::chr2:127711472..127711475,+#_80131c3ac5a106b7cfe232e3f05959b9+, p@chr2:127711472..127711475
3.1e-50FFCP PHASE1:Hg19::chr2:159306961..159306975,+#_80131c3ac5a106b7cfe232e3f05959b9+, p@chr2:159306961..159306975
3.1e-50FFCP PHASE1:Hg19::chr5:97747048..97747059,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr5:97747048..97747059, +
3.1e-50FFCP PHASE2:Hg19::chr1:19522690..19522704,-#_80131c3ac5a106b7cfe232e3f05959b9-, p@chr1:19522690..19522704
3.1e-50FFCP PHASE1:Hg19::chr7:12134371..12134377,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr7:12134371..12134377, -
3.1e-50FFCP PHASE1:Hg19::chr6:31683061..31683070,+#_80131c3ac5a106b7cfe232e3f05959b9p5@LY6G6D
3.1e-50FFCP PHASE1:Hg19::chr8:128418747..128418756,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr8:128418747..128418756, -
3.1e-50FFCP PHASE1:Hg19::chr6:91774965..91774974,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr6:91774965..91774974, +
3.1e-50FFCP PHASE2:Hg19::chr8:128807259..128807281,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr8:128807259..128807281, +
3.1e-50FFCP PHASE1:Hg19::chr8:127568784..127568794,+#_80131c3ac5a106b7cfe232e3f05959b9p6@ENST00000524320
3.1e-50FFCP PHASE2:Hg19::chr1:93128346..93128356,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr1:93128346..93128356, -
3.1e-50FFCP PHASE1:Hg19::chr13:46093198..46093203,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr13:46093198..46093203, +
3.1e-50FFCP PHASE1:Hg19::chr16:55344418..55344442,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr16:55344418..55344442, +
3.1e-50FFCP PHASE2:Hg19::chr8:55331615..55331618,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr8:55331615..55331618, +
3.1e-50FFCP PHASE1:Hg19::chrX:42162203..42162241,+#_80131c3ac5a106b7cfe232e3f05959b9p@chrX:42162203..42162241, +
3.1e-50FFCP PHASE1:Hg19::chr8:127440115..127440120,+#_80131c3ac5a106b7cfe232e3f05959b9+, p@chr8:127440115..127440120
3.1e-50FFCP PHASE2:Hg19::chr7:141499716..141499722,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr7:141499716..141499722, +
3.1e-50FFCP PHASE2:Hg19::chr6:372660..372670,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr6:372660..372670, -
3.1e-50FFCP PHASE1:Hg19::chr7:89797154..89797172,+#_80131c3ac5a106b7cfe232e3f05959b9p9@STEAP2
3.1e-50FFCP PHASE2:Hg19::chr16:55344418..55344442,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr16:55344418..55344442, +
3.1e-50FFCP PHASE1:Hg19::chr13:32790605..32790619,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr13:32790605..32790619, +
3.1e-50FFCP PHASE2:Hg19::chr6:5491056..5491061,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr6:5491056..5491061, +
3.1e-50FFCP PHASE1:Hg19::chr8:39792182..39792188,+#_80131c3ac5a106b7cfe232e3f05959b9p14@IDO2
3.1e-50FFCP PHASE2:Hg19::chr2:191384421..191384433,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr2:191384421..191384433, -
3.1e-50FFCP PHASE1:Hg19::chr4:157174324..157174332,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr4:157174324..157174332, +
3.1e-50FFCP PHASE2:Hg19::chr5:57619538..57619575,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr5:57619538..57619575, -
3.1e-50FFCP PHASE1:Hg19::chr3:140054724..140054735,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr3:140054724..140054735, -
3.1e-50FFCP PHASE1:Hg19::chr1:219739282..219739288,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr1:219739282..219739288, -
3.1e-50FFCP PHASE1:Hg19::chr2:205036975..205037009,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr2:205036975..205037009, -
3.1e-50FFCP PHASE2:Hg19::chr18:39550015..39550034,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr18:39550015..39550034, +
3.1e-50FFCP PHASE2:Hg19::chr4:169559850..169559856,-#_80131c3ac5a106b7cfe232e3f05959b9-, p@chr4:169559850..169559856
3.1e-50FFCP PHASE1:Hg19::chr9:98505341..98505348,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr9:98505341..98505348, +
3.1e-50FFCP PHASE1:Hg19::chr1:198324742..198324745,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr1:198324742..198324745, +
3.1e-50FFCP PHASE2:Hg19::chr3:24797750..24797759,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr3:24797750..24797759, -
3.1e-50FFCP PHASE2:Hg19::chr7:87232406..87232409,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr7:87232406..87232409, -
3.1e-50FFCP PHASE2:Hg19::chr8:127438794..127438800,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr8:127438794..127438800, +
3.1e-50FFCP PHASE1:Hg19::chr6:8389087..8389116,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr6:8389087..8389116, -
3.1e-50FFCP PHASE2:Hg19::chr2:148148505..148148515,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr2:148148505..148148515, -
3.1e-50FFCP PHASE2:Hg19::chr14:26793415..26793426,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr14:26793415..26793426, -
3.1e-50FFCP PHASE2:Hg19::chr5:97747048..97747059,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr5:97747048..97747059, +
3.1e-50FFCP PHASE1:Hg19::chr12:31632597..31632607,-#_80131c3ac5a106b7cfe232e3f05959b9p13@DENND5B
3.1e-50FFCP PHASE2:Hg19::chr18:53252911..53252918,-#_80131c3ac5a106b7cfe232e3f05959b9p106@TCF4
3.1e-50FFCP PHASE1:Hg19::chr8:128807259..128807281,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr8:128807259..128807281, +
3.1e-50FFCP PHASE1:Hg19::chr2:66794389..66794398,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr2:66794389..66794398, +
3.1e-50FFCP PHASE1:Hg19::chr6:5491056..5491061,+#_80131c3ac5a106b7cfe232e3f05959b9p@chr6:5491056..5491061, +
3.1e-50FFCP PHASE2:Hg19::chr14:22850283..22850310,-#_80131c3ac5a106b7cfe232e3f05959b9p@chr14:22850283..22850310, -