UBERON:0001744
From FANTOM5_SSTAR
Name: | lymphoid tissue | ||
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Namespace: | FANTOM | ||
Definition: | "Portion of connective tissue with various types of white blood cells enmeshed in it, most numerous being the lymphocytes[WP]." [Wikipedia:Lymphoid_tissue] | ||
Xrefs: |
| ||
Synonyms: |
"lymphatic tissue" EXACT [] "lymphocytic tissue" EXACT [] | ||
Comments: | This class was created automatically from a combination of ontologies | ||
Alt_id: | UBERON:FMA_55220-MA_0002436 | ||
Subset: | uberon_slim |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0000479(tissue) |
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part_of: | UBERON:0002193(hemolymphoid system),UBERON:0002465(lymphoid system) |
Children
is a: | UBERON:0012069 (epithelium-associated lymphoid tissue) |
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Ontology Tree: Loaded from BioPortal
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10047-101G2 (tonsil, adult, pool1)
- 10261-104C9
- 10262-104D1 (Follicle Associated Epithelium, pool2)
- 10263-104D2 (Follicle Associated Epithelium, pool3)
Mouse (Mus musculus)
- 10047-101G2 (tonsil, adult, pool1)
- 10261-104C9
- 10262-104D1 (Follicle Associated Epithelium, pool2)
- 10263-104D2 (Follicle Associated Epithelium, pool3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001744 (lymphoid tissue), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
5.42e-195 | FFCP PHASE1:Hg19::chr12:53200416..53200421,+#_7ff2e1def5c9cd32f90af42bed913aaa | p7@CU692075 |
5.42e-195 | FFCP PHASE2:Hg19::chr19:5850872..5850893,-#_7ff2e1def5c9cd32f90af42bed913aaa | p@chr19:5850872..5850893, - |
5.42e-195 | FFCP PHASE1:Hg19::chr2:89459813..89459818,-#_7ff2e1def5c9cd32f90af42bed913aaa | p1@IGKV6-21 |
5.42e-195 | FFCP PHASE2:Hg19::chr14:107049312..107049315,-#_7ff2e1def5c9cd32f90af42bed913aaa | p2@IGHV3-53 |
5.42e-195 | FFCP PHASE1:Hg19::chr20:21684387..21684390,-#_7ff2e1def5c9cd32f90af42bed913aaa | p2@ENST00000424377 |
5.42e-195 | FFCP PHASE2:Hg19::chr12:53200416..53200421,+#_7ff2e1def5c9cd32f90af42bed913aaa | p7@CU692075 |
5.42e-195 | FFCP PHASE1:Hg19::chr16:12334592..12334599,+#_7ff2e1def5c9cd32f90af42bed913aaa | p@chr16:12334592..12334599, + |
5.42e-195 | FFCP PHASE2:Hg19::chr16:12334592..12334599,+#_7ff2e1def5c9cd32f90af42bed913aaa | p@chr16:12334592..12334599, + |
5.42e-195 | FFCP PHASE1:Hg19::chr19:5850872..5850893,-#_7ff2e1def5c9cd32f90af42bed913aaa | p@chr19:5850872..5850893, - |
5.42e-195 | FFCP PHASE1:Hg19::chr14:107049312..107049315,-#_7ff2e1def5c9cd32f90af42bed913aaa | p2@IGHV3-53 |
5.42e-195 | FFCP PHASE1:Hg19::chr16:12337006..12337010,+#_7ff2e1def5c9cd32f90af42bed913aaa | p@chr16:12337006..12337010, + |
5.42e-195 | FFCP PHASE2:Hg19::chr2:89459813..89459818,-#_7ff2e1def5c9cd32f90af42bed913aaa | p1@IGKV6-21 |
5.42e-195 | FFCP PHASE2:Hg19::chr20:21684387..21684390,-#_7ff2e1def5c9cd32f90af42bed913aaa | p2@ENST00000424377 |
5.42e-195 | FFCP PHASE2:Hg19::chr16:12337006..12337010,+#_7ff2e1def5c9cd32f90af42bed913aaa | p@chr16:12337006..12337010, + |
9.37e-99 | FFCP PHASE2:Hg19::chr19:14662395..14662414,+#_8c96b0f733ff2d89c8c4372b9a7fc264 | p@chr19:14662395..14662414, + |
9.37e-99 | FFCP PHASE1:Hg19::chr11:1263622..1263627,+#_8c96b0f733ff2d89c8c4372b9a7fc264 | p@chr11:1263622..1263627, + |
9.37e-99 | FFCP PHASE2:Hg19::chr11:1263622..1263627,+#_8c96b0f733ff2d89c8c4372b9a7fc264 | p@chr11:1263622..1263627, + |
9.37e-99 | FFCP PHASE1:Hg19::chr20:31611186..31611191,+#_8c96b0f733ff2d89c8c4372b9a7fc264 | p10@BPIFB6 |
9.37e-99 | FFCP PHASE2:Hg19::chr20:31611454..31611461,+#_8c96b0f733ff2d89c8c4372b9a7fc264 | p8@BPIFB6 |
9.37e-99 | FFCP PHASE2:Hg19::chr6:168095835..168095838,-#_8c96b0f733ff2d89c8c4372b9a7fc264 | p@chr6:168095835..168095838, - |
9.37e-99 | FFCP PHASE1:Hg19::chr7:25361115..25361117,+#_8c96b0f733ff2d89c8c4372b9a7fc264 | p@chr7:25361115..25361117, + |
9.37e-99 | FFCP PHASE2:Hg19::chr11:1249994..1249999,+#_8c96b0f733ff2d89c8c4372b9a7fc264 | p30@MUC5B |
9.37e-99 | FFCP PHASE1:Hg19::chr11:1249994..1249999,+#_8c96b0f733ff2d89c8c4372b9a7fc264 | p30@MUC5B |
9.37e-99 | FFCP PHASE2:Hg19::chr20:31611186..31611191,+#_8c96b0f733ff2d89c8c4372b9a7fc264 | p10@BPIFB6 |
9.37e-99 | FFCP PHASE1:Hg19::chr19:14662395..14662414,+#_8c96b0f733ff2d89c8c4372b9a7fc264 | p@chr19:14662395..14662414, + |
9.37e-99 | FFCP PHASE2:Hg19::chr7:25361115..25361117,+#_8c96b0f733ff2d89c8c4372b9a7fc264 | p@chr7:25361115..25361117, + |
9.37e-99 | FFCP PHASE1:Hg19::chr6:168095835..168095838,-#_8c96b0f733ff2d89c8c4372b9a7fc264 | p@chr6:168095835..168095838, - |
9.37e-99 | FFCP PHASE1:Hg19::chr20:31611454..31611461,+#_8c96b0f733ff2d89c8c4372b9a7fc264 | p8@BPIFB6 |
2.55e-98 | FFCP PHASE1:Hg19::chr4:8437851..8437881,+#_eadc745b3f3d225e40b2cbdfb1f6c69f | p6@METTL19 |
2.55e-98 | FFCP PHASE2:Hg19::chr10:135337234..135337244,-#_eadc745b3f3d225e40b2cbdfb1f6c69f | p@chr10:135337234..135337244, - |
2.55e-98 | FFCP PHASE2:Hg19::chr11:1260725..1260734,+#_eadc745b3f3d225e40b2cbdfb1f6c69f | p@chr11:1260725..1260734, + |
2.55e-98 | FFCP PHASE1:Hg19::chr11:1260725..1260734,+#_eadc745b3f3d225e40b2cbdfb1f6c69f | p@chr11:1260725..1260734, + |
2.55e-98 | FFCP PHASE2:Hg19::chr4:8437851..8437881,+#_eadc745b3f3d225e40b2cbdfb1f6c69f | p6@METTL19 |
2.55e-98 | FFCP PHASE1:Hg19::chr20:36694529..36694537,+#_eadc745b3f3d225e40b2cbdfb1f6c69f | p30@RPRD1B |
2.55e-98 | FFCP PHASE1:Hg19::chr16:70602961..70602972,+#_eadc745b3f3d225e40b2cbdfb1f6c69f | p@chr16:70602961..70602972, + |
2.55e-98 | FFCP PHASE2:Hg19::chr20:36694529..36694537,+#_eadc745b3f3d225e40b2cbdfb1f6c69f | p30@RPRD1B |
2.55e-98 | FFCP PHASE1:Hg19::chr12:52478564..52478569,+#_eadc745b3f3d225e40b2cbdfb1f6c69f | p@chr12:52478564..52478569, + |
2.55e-98 | FFCP PHASE1:Hg19::chr10:135337234..135337244,-#_eadc745b3f3d225e40b2cbdfb1f6c69f | p@chr10:135337234..135337244, - |
2.55e-98 | FFCP PHASE2:Hg19::chr16:70602961..70602972,+#_eadc745b3f3d225e40b2cbdfb1f6c69f | p@chr16:70602961..70602972, + |
2.55e-98 | FFCP PHASE2:Hg19::chr11:1263382..1263385,+#_eadc745b3f3d225e40b2cbdfb1f6c69f | p@chr11:1263382..1263385, + |
2.55e-98 | FFCP PHASE2:Hg19::chr12:52478564..52478569,+#_eadc745b3f3d225e40b2cbdfb1f6c69f | +, p@chr12:52478564..52478569 |
2.55e-98 | FFCP PHASE1:Hg19::chr11:1263382..1263385,+#_eadc745b3f3d225e40b2cbdfb1f6c69f | p@chr11:1263382..1263385, + |
1.87e-86 | FFCP PHASE1:Mm9::chr19:31038353..31038362,+#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr19:31038353..31038362, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:63059909..63059910,+#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr2:63059909..63059910, + |
1.87e-86 | FFCP PHASE1:Mm9::chr12:115979100..115979103,-#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr12:115979100..115979103, - |
1.87e-86 | FFCP PHASE2:Mm9::chr2:14201203..14201212,+#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr2:14201203..14201212, + |
1.87e-86 | FFCP PHASE2:Mm9::chr19:38060099..38060102,+#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr19:38060099..38060102, + |
1.87e-86 | FFCP PHASE2:Mm9::chr12:116051009..116051016,-#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr12:116051009..116051016, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:14201203..14201212,+#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr2:14201203..14201212, + |
1.87e-86 | FFCP PHASE1:Mm9::chr8:23117055..23117056,-#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr8:23117055..23117056, - |
1.87e-86 | FFCP PHASE1:Mm9::chr6:69701328..69701342,-#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p1@ENSMUST00000114212 |
1.87e-86 | FFCP PHASE1:Mm9::chr6:69785263..69785268,-#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr6:69785263..69785268, - |
1.87e-86 | FFCP PHASE2:Mm9::chr6:69701328..69701342,-#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p1@ENSMUST00000114212 |
1.87e-86 | FFCP PHASE1:Mm9::chr2:63059909..63059910,+#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr2:63059909..63059910, + |
1.87e-86 | FFCP PHASE2:Mm9::chr19:31038353..31038362,+#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr19:31038353..31038362, + |
1.87e-86 | FFCP PHASE1:Mm9::chr17:59564142..59564144,+#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr17:59564142..59564144, + |
1.87e-86 | FFCP PHASE2:Mm9::chr6:69785263..69785268,-#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr6:69785263..69785268, - |
1.87e-86 | FFCP PHASE1:Mm9::chr9:69086930..69086933,+#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | +, p@chr9:69086930..69086933 |
1.87e-86 | FFCP PHASE1:Mm9::chr19:38060099..38060102,+#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr19:38060099..38060102, + |
1.87e-86 | FFCP PHASE2:Mm9::chr17:59564142..59564144,+#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr17:59564142..59564144, + |
1.87e-86 | FFCP PHASE2:Mm9::chr12:115974938..115974945,-#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | -, p@chr12:115974938..115974945 |
1.87e-86 | FFCP PHASE2:Mm9::chr8:23117055..23117056,-#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr8:23117055..23117056, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:69086930..69086933,+#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr9:69086930..69086933, + |
1.87e-86 | FFCP PHASE1:Mm9::chr12:116051009..116051016,-#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr12:116051009..116051016, - |
1.87e-86 | FFCP PHASE2:Mm9::chr12:115979100..115979103,-#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr12:115979100..115979103, - |
1.87e-86 | FFCP PHASE1:Mm9::chr12:115974938..115974945,-#_4c86dcd3b8c4f5cf84bd729fb7cdf525 | p@chr12:115974938..115974945, - |
1.23e-66 | FFCP PHASE1:Hg19::chr12:52478546..52478552,+#_f7873f47078b10f870e23fba81db8d23 | p@chr12:52478546..52478552, + |
1.23e-66 | FFCP PHASE2:Hg19::chr12:52478546..52478552,+#_f7873f47078b10f870e23fba81db8d23 | p@chr12:52478546..52478552, + |
1.23e-66 | FFCP PHASE1:Hg19::chr1:157567826..157567835,-#_f7873f47078b10f870e23fba81db8d23 | p2@FCRL4 |
1.23e-66 | FFCP PHASE2:Hg19::chr1:157567826..157567835,-#_f7873f47078b10f870e23fba81db8d23 | p2@FCRL4 |
2.39e-66 | FFCP PHASE1:Hg19::chr20:62321640..62321645,+#_eff6b61b7f0c01f547111d5323c61c64 | p1@BC131817 |
2.39e-66 | FFCP PHASE1:Hg19::chr14:103560509..103560517,+#_eff6b61b7f0c01f547111d5323c61c64 | p@chr14:103560509..103560517, + |
2.39e-66 | FFCP PHASE2:Hg19::chr20:62321640..62321645,+#_eff6b61b7f0c01f547111d5323c61c64 | p1@BC131817 |
2.39e-66 | FFCP PHASE1:Hg19::chr13:107026326..107026335,-#_eff6b61b7f0c01f547111d5323c61c64 | p@chr13:107026326..107026335, - |
2.39e-66 | FFCP PHASE1:Hg19::chr20:31612754..31612763,+#_eff6b61b7f0c01f547111d5323c61c64 | p@chr20:31612754..31612763, + |
2.39e-66 | FFCP PHASE1:Hg19::chr19:36640447..36640459,+#_eff6b61b7f0c01f547111d5323c61c64 | p@chr19:36640447..36640459, + |
2.39e-66 | FFCP PHASE2:Hg19::chr19:36640447..36640459,+#_eff6b61b7f0c01f547111d5323c61c64 | p@chr19:36640447..36640459, + |
2.39e-66 | FFCP PHASE1:Hg19::chr11:1265985..1265990,+#_eff6b61b7f0c01f547111d5323c61c64 | p@chr11:1265985..1265990, + |
2.39e-66 | FFCP PHASE2:Hg19::chr11:1265985..1265990,+#_eff6b61b7f0c01f547111d5323c61c64 | p@chr11:1265985..1265990, + |
2.39e-66 | FFCP PHASE2:Hg19::chr13:107026326..107026335,-#_eff6b61b7f0c01f547111d5323c61c64 | p@chr13:107026326..107026335, - |
2.39e-66 | FFCP PHASE2:Hg19::chr14:103560509..103560517,+#_eff6b61b7f0c01f547111d5323c61c64 | +, p@chr14:103560509..103560517 |
2.39e-66 | FFCP PHASE2:Hg19::chr20:31612754..31612763,+#_eff6b61b7f0c01f547111d5323c61c64 | p@chr20:31612754..31612763, + |
4.66e-66 | FFCP PHASE2:Hg19::chr18:29006845..29006854,-#_bfe3c20827da2e88dcffdec71251ae6c | p@chr18:29006845..29006854, - |
4.66e-66 | FFCP PHASE1:Hg19::chr19:51530837..51530842,-#_bfe3c20827da2e88dcffdec71251ae6c | p10@KLK11 |
4.66e-66 | FFCP PHASE2:Hg19::chr6:30954084..30954093,-#_bfe3c20827da2e88dcffdec71251ae6c | p@chr6:30954084..30954093, - |
4.66e-66 | FFCP PHASE1:Hg19::chr3:124535316..124535340,+#_bfe3c20827da2e88dcffdec71251ae6c | p@chr3:124535316..124535340, + |
4.66e-66 | FFCP PHASE1:Hg19::chr3:187957646..187957656,+#_bfe3c20827da2e88dcffdec71251ae6c | p43@LPP |
4.66e-66 | FFCP PHASE1:Hg19::chr16:69418649..69418659,-#_bfe3c20827da2e88dcffdec71251ae6c | p@chr16:69418649..69418659, - |
4.66e-66 | FFCP PHASE2:Hg19::chr12:53673418..53673427,+#_bfe3c20827da2e88dcffdec71251ae6c | p9@ESPL1 |
4.66e-66 | FFCP PHASE2:Hg19::chr16:69418649..69418659,-#_bfe3c20827da2e88dcffdec71251ae6c | p@chr16:69418649..69418659, - |
4.66e-66 | FFCP PHASE2:Hg19::chr19:51530837..51530842,-#_bfe3c20827da2e88dcffdec71251ae6c | p10@KLK11 |
4.66e-66 | FFCP PHASE1:Hg19::chr18:49921251..49921263,+#_bfe3c20827da2e88dcffdec71251ae6c | p@chr18:49921251..49921263, + |
4.66e-66 | FFCP PHASE1:Hg19::chr3:187957664..187957675,+#_bfe3c20827da2e88dcffdec71251ae6c | p58@LPP |
4.66e-66 | FFCP PHASE2:Hg19::chr1:152382640..152382645,+#_bfe3c20827da2e88dcffdec71251ae6c | p@chr1:152382640..152382645, + |
4.66e-66 | FFCP PHASE2:Hg19::chr18:49921251..49921263,+#_bfe3c20827da2e88dcffdec71251ae6c | p@chr18:49921251..49921263, + |
4.66e-66 | FFCP PHASE2:Hg19::chr3:187957646..187957656,+#_bfe3c20827da2e88dcffdec71251ae6c | p43@LPP |
4.66e-66 | FFCP PHASE2:Hg19::chr3:124535316..124535340,+#_bfe3c20827da2e88dcffdec71251ae6c | p@chr3:124535316..124535340, + |
4.66e-66 | FFCP PHASE2:Hg19::chr11:1283367..1283377,+#_bfe3c20827da2e88dcffdec71251ae6c | p@chr11:1283367..1283377, + |
4.66e-66 | FFCP PHASE1:Hg19::chr11:1283367..1283377,+#_bfe3c20827da2e88dcffdec71251ae6c | p@chr11:1283367..1283377, + |
4.66e-66 | FFCP PHASE1:Hg19::chr12:53673418..53673427,+#_bfe3c20827da2e88dcffdec71251ae6c | p9@ESPL1 |