Personal tools

UBERON:0002061

From FANTOM5_SSTAR

Jump to: navigation, search

Name:truncus arteriosus
Namespace:FANTOM
Definition:"The truncus arteriosus and bulbus cordis are divided by the aorticopulmonary septum. The truncus arteriosus gives rise to the ascending aorta and the pulmonary trunk. The bulbus cordis gives rise to the smooth parts (outflow tract) of the left and right ventricles." [Wikipedia:Truncus_arteriosus_(embryology)]
Xrefs:
links:

EHDAA2:0004143
FMA:70301
GAID:554
MA:0000103
MESH:A.07.541.278.930
ncithesaurus:Trancus_Arteriosus
OpenCyc:Mx4rquH9YKgNEdudWQACs5b6Bw

SCTID:308828009
Comments:AO notes: assume spelling error for ncit
Alt_id: UBERON:FMA_70301-MA_0000103
Subset: uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000077(mixed endoderm/mesoderm-derived structure),UBERON:0001637(artery),UBERON:0002050(embryonic structure),UBERON:0003498(heart blood vessel),UBERON:0010314(structure with developmental contribution from neural crest)
develops_from:UBERON:0005432(aortic sac)
part_of:UBERON:0004145(outflow tract),UBERON:0005498(primitive heart tube)



Children

develops from:UBERON:0002012 (pulmonary artery)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002061 (truncus arteriosus), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_ad6051299615e83e1313840dfcefe9ffp@chr6:21648948..21648949, +
1.55e-98FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_ad6051299615e83e1313840dfcefe9ffp@chr4:70707713..70707716, -
1.55e-98FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_ad6051299615e83e1313840dfcefe9ffp@chr8:90366581..90366594, -
1.55e-98FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_ad6051299615e83e1313840dfcefe9ffp@chr8:90366581..90366594, -
1.55e-98FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_ad6051299615e83e1313840dfcefe9ffp@chr6:21648948..21648949, +
1.55e-98FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_ad6051299615e83e1313840dfcefe9ffp@chr4:70707713..70707716, -
2.74e-50FFCP PHASE2:Hg19::chr4:70707556..70707558,-#_1f10934da48d02e2cf9b7517a89545c3p@chr4:70707556..70707558, -
2.74e-50FFCP PHASE1:Hg19::chr4:70707556..70707558,-#_1f10934da48d02e2cf9b7517a89545c3p@chr4:70707556..70707558, -
4.52e-50FFCP PHASE1:Hg19::chr3:158928407..158928414,+#_d6c6643704dbc54971fd15789654501bp@chr3:158928407..158928414, +
4.52e-50FFCP PHASE2:Hg19::chr8:120651826..120651840,-#_d6c6643704dbc54971fd15789654501bp@chr8:120651826..120651840, -
4.52e-50FFCP PHASE2:Hg19::chr10:90749902..90749913,+#_d6c6643704dbc54971fd15789654501bp14@FAS
4.52e-50FFCP PHASE1:Hg19::chr6:21666284..21666297,+#_d6c6643704dbc54971fd15789654501bp26@LINC00340
4.52e-50FFCP PHASE2:Hg19::chr3:158928407..158928414,+#_d6c6643704dbc54971fd15789654501bp@chr3:158928407..158928414, +
4.52e-50FFCP PHASE2:Hg19::chrX:23072856..23072859,-#_d6c6643704dbc54971fd15789654501bp@chrX:23072856..23072859, -
4.52e-50FFCP PHASE1:Hg19::chrX:23072856..23072859,-#_d6c6643704dbc54971fd15789654501bp@chrX:23072856..23072859, -
4.52e-50FFCP PHASE1:Hg19::chr10:90749902..90749913,+#_d6c6643704dbc54971fd15789654501bp14@FAS
4.52e-50FFCP PHASE2:Hg19::chr6:21666284..21666297,+#_d6c6643704dbc54971fd15789654501bp26@LINC00340
4.52e-50FFCP PHASE1:Hg19::chr8:120651826..120651840,-#_d6c6643704dbc54971fd15789654501bp@chr8:120651826..120651840, -
3.61e-34FFCP PHASE2:Hg19::chr4:70707608..70707615,-#_250696c108abf54d9cf3aa67fc318251p@chr4:70707608..70707615, -
3.61e-34FFCP PHASE1:Hg19::chr4:70707608..70707615,-#_250696c108abf54d9cf3aa67fc318251p@chr4:70707608..70707615, -
5.04e-34FFCP PHASE2:Hg19::chr17:76824975..76824978,-#_bab0863db28c0ed560fa519ae733b79cp@chr17:76824975..76824978, -
5.04e-34FFCP PHASE1:Hg19::chr17:76824975..76824978,-#_bab0863db28c0ed560fa519ae733b79cp@chr17:76824975..76824978, -
5.04e-34FFCP PHASE1:Hg19::chr3:156258392..156258395,-#_bab0863db28c0ed560fa519ae733b79cp@chr3:156258392..156258395, -
5.04e-34FFCP PHASE1:Hg19::chr4:70690584..70690589,+#_bab0863db28c0ed560fa519ae733b79cp@chr4:70690584..70690589, +
5.04e-34FFCP PHASE1:Hg19::chr11:131614903..131614910,-#_bab0863db28c0ed560fa519ae733b79cp@chr11:131614903..131614910, -
5.04e-34FFCP PHASE2:Hg19::chr4:70690584..70690589,+#_bab0863db28c0ed560fa519ae733b79cp@chr4:70690584..70690589, +
5.04e-34FFCP PHASE2:Hg19::chr3:156258392..156258395,-#_bab0863db28c0ed560fa519ae733b79cp@chr3:156258392..156258395, -
5.04e-34FFCP PHASE2:Hg19::chr11:131614903..131614910,-#_bab0863db28c0ed560fa519ae733b79cp@chr11:131614903..131614910, -
7.05e-34FFCP PHASE2:Hg19::chr8:134047162..134047169,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr8:134047162..134047169, +
7.05e-34FFCP PHASE2:Hg19::chr7:22687639..22687644,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr7:22687639..22687644, +
7.05e-34FFCP PHASE1:Hg19::chr1:176668544..176668553,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr1:176668544..176668553, +
7.05e-34FFCP PHASE1:Hg19::chrX:140904171..140904173,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chrX:140904171..140904173, +
7.05e-34FFCP PHASE1:Hg19::chr8:134047162..134047169,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr8:134047162..134047169, +
7.05e-34FFCP PHASE2:Hg19::chrX:140904171..140904173,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chrX:140904171..140904173, +
7.05e-34FFCP PHASE2:Hg19::chr1:93043102..93043113,-#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr1:93043102..93043113, -
7.05e-34FFCP PHASE1:Hg19::chr7:22687639..22687644,+#_ddb60b20b1cb73bcb7be32e06a7a13f9+, p@chr7:22687639..22687644
7.05e-34FFCP PHASE2:Hg19::chr4:38147484..38147500,-#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr4:38147484..38147500, -
7.05e-34FFCP PHASE2:Hg19::chr20:48184812..48184818,-#_ddb60b20b1cb73bcb7be32e06a7a13f9p13@PTGIS
7.05e-34FFCP PHASE2:Hg19::chr1:176668544..176668553,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr1:176668544..176668553, +
7.05e-34FFCP PHASE1:Hg19::chr20:48184812..48184818,-#_ddb60b20b1cb73bcb7be32e06a7a13f9p13@PTGIS
7.05e-34FFCP PHASE2:Hg19::chr4:24645959..24645967,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr4:24645959..24645967, +
7.05e-34FFCP PHASE2:Hg19::chr11:94587086..94587097,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p19@AMOTL1
7.05e-34FFCP PHASE1:Hg19::chr4:38147484..38147500,-#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr4:38147484..38147500, -
7.05e-34FFCP PHASE1:Hg19::chr6:119590894..119590904,-#_ddb60b20b1cb73bcb7be32e06a7a13f9p1@ENST00000406333
7.05e-34FFCP PHASE1:Hg19::chr9:16059821..16059828,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr9:16059821..16059828, +
7.05e-34FFCP PHASE1:Hg19::chr4:24645959..24645967,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr4:24645959..24645967, +
7.05e-34FFCP PHASE2:Hg19::chr6:119590894..119590904,-#_ddb60b20b1cb73bcb7be32e06a7a13f9p1@ENST00000406333
7.05e-34FFCP PHASE2:Hg19::chr19:54466179..54466202,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p1@CACNG8
7.05e-34FFCP PHASE1:Hg19::chr19:54466179..54466202,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p1@CACNG8
7.05e-34FFCP PHASE2:Hg19::chr13:38136724..38136726,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr13:38136724..38136726, +
7.05e-34FFCP PHASE2:Hg19::chr7:18834859..18834879,-#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr7:18834859..18834879, -
7.05e-34FFCP PHASE1:Hg19::chr1:93043102..93043113,-#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr1:93043102..93043113, -
7.05e-34FFCP PHASE1:Hg19::chr7:18834859..18834879,-#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr7:18834859..18834879, -
7.05e-34FFCP PHASE2:Hg19::chr9:16059821..16059828,+#_ddb60b20b1cb73bcb7be32e06a7a13f9+, p@chr9:16059821..16059828
7.05e-34FFCP PHASE1:Hg19::chr11:94587086..94587097,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p19@AMOTL1
7.05e-34FFCP PHASE1:Hg19::chr13:38136724..38136726,+#_ddb60b20b1cb73bcb7be32e06a7a13f9p@chr13:38136724..38136726, +
5.56e-26FFCP PHASE1:Hg19::chr9:33797893..33797903,+#_2fc50f094f4d2c092266de3538c337e1p@chr9:33797893..33797903, +
5.56e-26FFCP PHASE2:Hg19::chr9:33797893..33797903,+#_2fc50f094f4d2c092266de3538c337e1p@chr9:33797893..33797903, +
7.14e-26FFCP PHASE1:Hg19::chr6:34208414..34208429,+#_2da8e42d939c2345de2ccd1893f4d935p16@HMGA1
7.14e-26FFCP PHASE1:Hg19::chr10:103040652..103040655,+#_2da8e42d939c2345de2ccd1893f4d935p1@ENST00000492301
7.14e-26FFCP PHASE1:Hg19::chr8:123580995..123581003,-#_2da8e42d939c2345de2ccd1893f4d935p@chr8:123580995..123581003, -
7.14e-26FFCP PHASE1:Hg19::chr19:10218330..10218339,+#_2da8e42d939c2345de2ccd1893f4d935p1@SNORD105
7.14e-26FFCP PHASE1:Hg19::chr2:73302288..73302299,-#_2da8e42d939c2345de2ccd1893f4d935p13@RAB11FIP5
7.14e-26FFCP PHASE2:Hg19::chr10:103040652..103040655,+#_2da8e42d939c2345de2ccd1893f4d935p1@ENST00000492301
7.14e-26FFCP PHASE2:Hg19::chr4:891819..891820,-#_2da8e42d939c2345de2ccd1893f4d935p@chr4:891819..891820, -
7.14e-26FFCP PHASE2:Hg19::chr18:65175930..65175941,+#_2da8e42d939c2345de2ccd1893f4d935p@chr18:65175930..65175941, +
7.14e-26FFCP PHASE2:Hg19::chr6:34208414..34208429,+#_2da8e42d939c2345de2ccd1893f4d935p16@HMGA1
7.14e-26FFCP PHASE2:Hg19::chr17:61995172..61995199,-#_2da8e42d939c2345de2ccd1893f4d935p@chr17:61995172..61995199, -
7.14e-26FFCP PHASE1:Hg19::chr4:891819..891820,-#_2da8e42d939c2345de2ccd1893f4d935p@chr4:891819..891820, -
7.14e-26FFCP PHASE2:Hg19::chr19:15509437..15509442,-#_2da8e42d939c2345de2ccd1893f4d935p@chr19:15509437..15509442, -
7.14e-26FFCP PHASE1:Hg19::chr17:61995172..61995199,-#_2da8e42d939c2345de2ccd1893f4d935p@chr17:61995172..61995199, -
7.14e-26FFCP PHASE1:Hg19::chr18:65175930..65175941,+#_2da8e42d939c2345de2ccd1893f4d935p@chr18:65175930..65175941, +
7.14e-26FFCP PHASE2:Hg19::chr19:10218330..10218339,+#_2da8e42d939c2345de2ccd1893f4d935p1@SNORD105
7.14e-26FFCP PHASE1:Hg19::chr19:15509437..15509442,-#_2da8e42d939c2345de2ccd1893f4d935p@chr19:15509437..15509442, -
7.14e-26FFCP PHASE2:Hg19::chr8:123580995..123581003,-#_2da8e42d939c2345de2ccd1893f4d935p@chr8:123580995..123581003, -
7.14e-26FFCP PHASE2:Hg19::chr2:73302288..73302299,-#_2da8e42d939c2345de2ccd1893f4d935p13@RAB11FIP5
9.18e-26FFCP PHASE2:Hg19::chr4:114257151..114257163,+#_9282de27a36784ada1abfbd0a7a2235ap28@ANK2
9.18e-26FFCP PHASE2:Hg19::chr1:185703364..185703371,-#_9282de27a36784ada1abfbd0a7a2235ap@chr1:185703364..185703371, -
9.18e-26FFCP PHASE1:Hg19::chr9:33797981..33798005,-#_9282de27a36784ada1abfbd0a7a2235ap@chr9:33797981..33798005, -
9.18e-26FFCP PHASE2:Hg19::chr11:13484984..13484992,+#_9282de27a36784ada1abfbd0a7a2235ap5@BC031228
9.18e-26FFCP PHASE1:Hg19::chr5:146890197..146890224,-#_9282de27a36784ada1abfbd0a7a2235ap@chr5:146890197..146890224, -
9.18e-26FFCP PHASE1:Hg19::chr4:114257151..114257163,+#_9282de27a36784ada1abfbd0a7a2235ap28@ANK2
9.18e-26FFCP PHASE2:Hg19::chr9:33797981..33798005,-#_9282de27a36784ada1abfbd0a7a2235ap@chr9:33797981..33798005, -
9.18e-26FFCP PHASE1:Hg19::chr2:84316409..84316414,-#_9282de27a36784ada1abfbd0a7a2235ap@chr2:84316409..84316414, -
9.18e-26FFCP PHASE2:Hg19::chr8:37374492..37374499,-#_9282de27a36784ada1abfbd0a7a2235ap1@ENST00000521989
9.18e-26FFCP PHASE1:Hg19::chr8:37374492..37374499,-#_9282de27a36784ada1abfbd0a7a2235ap1@ENST00000521989
9.18e-26FFCP PHASE2:Hg19::chr2:238116338..238116342,-#_9282de27a36784ada1abfbd0a7a2235ap@chr2:238116338..238116342, -
9.18e-26FFCP PHASE2:Hg19::chr2:84316409..84316414,-#_9282de27a36784ada1abfbd0a7a2235ap@chr2:84316409..84316414, -
9.18e-26FFCP PHASE2:Hg19::chr6:148593641..148593643,+#_9282de27a36784ada1abfbd0a7a2235ap@chr6:148593641..148593643, +
9.18e-26FFCP PHASE2:Hg19::chr8:94712896..94712909,+#_9282de27a36784ada1abfbd0a7a2235ap10@FAM92A1
9.18e-26FFCP PHASE1:Hg19::chr8:94712896..94712909,+#_9282de27a36784ada1abfbd0a7a2235ap10@FAM92A1
9.18e-26FFCP PHASE1:Hg19::chr15:71371688..71371691,-#_9282de27a36784ada1abfbd0a7a2235ap@chr15:71371688..71371691, -
9.18e-26FFCP PHASE1:Hg19::chr6:148593641..148593643,+#_9282de27a36784ada1abfbd0a7a2235ap@chr6:148593641..148593643, +
9.18e-26FFCP PHASE2:Hg19::chr15:71371688..71371691,-#_9282de27a36784ada1abfbd0a7a2235ap@chr15:71371688..71371691, -
9.18e-26FFCP PHASE1:Hg19::chr2:238116338..238116342,-#_9282de27a36784ada1abfbd0a7a2235ap@chr2:238116338..238116342, -
9.18e-26FFCP PHASE2:Hg19::chr4:74392579..74392583,+#_9282de27a36784ada1abfbd0a7a2235ap@chr4:74392579..74392583, +
9.18e-26FFCP PHASE2:Hg19::chr5:146890197..146890224,-#_9282de27a36784ada1abfbd0a7a2235ap@chr5:146890197..146890224, -
9.18e-26FFCP PHASE2:Hg19::chr3:11675748..11675759,-#_9282de27a36784ada1abfbd0a7a2235ap@chr3:11675748..11675759, -
9.18e-26FFCP PHASE2:Hg19::chr19:681941..681952,+#_9282de27a36784ada1abfbd0a7a2235a+, p@chr19:681941..681952
9.18e-26FFCP PHASE1:Hg19::chr11:13484984..13484992,+#_9282de27a36784ada1abfbd0a7a2235ap5@BC031228