Personal tools

UBERON:0002078

From FANTOM5_SSTAR

Jump to: navigation, search

Name:right cardiac atrium
Namespace:FANTOM
Definition:"Right cardiac chamber which is continuous with the superior vena cava and inferior vena cava.[FMA]" [FMA:FMA, Wikipedia:Right_atrium]
Xrefs:
links:

AAO:0010248
BTO:0001703
EHDAA2:0000290
EMAPA:17321
FMA:7096
galen:RightAtrium
[1]
[ 200px-Diagram_of_the_human_heart_%28cropped%29.svg.png 200px-Diagram_of_the_human_heart_%28cropped%29.svg.png]
MA:0000075
ncithesaurus:Right_Atrium
OpenCyc:Mx4runNcs6fqEdudWQACs5b6Bw
OpenCyc:Mx8Ngh4rvgHsHZwpEbGdrcN5Y29ycB4rDJ89oqgPEdudWQACs5b6Bw
SCTID:244383003
VHOG:0000328

XAO:0003192
Synonyms: "atrium dextrum" RELATED LATIN [Wikipedia:Right_atrium]
"cardiac right atrium" EXACT []
"heart right atrium" EXACT []
"right atrium of heart" EXACT []
"right cardiac atrium" EXACT []
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_7096-MA_0000075
Subset: uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0002081(cardiac atrium),UBERON:0015212(lateral structure)



Children

part of:UBERON:0005208 (right atrium valve),UBERON:0005965 (outflow part of right atrium)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002078 (right cardiac atrium), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_73c76a45228944cfbcf173379dd9711cp@chr15:86272097..86272099, +
5.42e-195FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_73c76a45228944cfbcf173379dd9711c-, p@chr10:92678409..92678410
5.42e-195FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_73c76a45228944cfbcf173379dd9711cp@chr10:92678409..92678410, -
5.42e-195FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_73c76a45228944cfbcf173379dd9711cp@chr5:99390735..99390743, -
5.42e-195FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_73c76a45228944cfbcf173379dd9711cp@chr15:86272097..86272099, +
5.42e-195FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_73c76a45228944cfbcf173379dd9711cp@chr5:99390735..99390743, -
9.37e-99FFCP PHASE1:Hg19::chr7:97501400..97501407,-#_6afdd469a18e1197be43e9c9fdc2e49dp16@ASNS
9.37e-99FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_6afdd469a18e1197be43e9c9fdc2e49dp@chr2:179656442..179656451, -
9.37e-99FFCP PHASE2:Hg19::chr7:97501400..97501407,-#_6afdd469a18e1197be43e9c9fdc2e49dp16@ASNS
9.37e-99FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_6afdd469a18e1197be43e9c9fdc2e49dp@chr2:179656442..179656451, -
2.55e-98FFCP PHASE2:Hg19::chrX:136514398..136514433,-#_4d6b84afac559fdf6a3e7058aacfc675p@chrX:136514398..136514433, -
2.55e-98FFCP PHASE2:Hg19::chr18:4003453..4003457,+#_4d6b84afac559fdf6a3e7058aacfc675p@chr18:4003453..4003457, +
2.55e-98FFCP PHASE2:Hg19::chr6:70647888..70647891,+#_4d6b84afac559fdf6a3e7058aacfc675p@chr6:70647888..70647891, +
2.55e-98FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_4d6b84afac559fdf6a3e7058aacfc675p@chr22:36000901..36000903, -
2.55e-98FFCP PHASE1:Hg19::chr18:4003453..4003457,+#_4d6b84afac559fdf6a3e7058aacfc675p@chr18:4003453..4003457, +
2.55e-98FFCP PHASE1:Hg19::chr14:68375236..68375240,+#_4d6b84afac559fdf6a3e7058aacfc675p9@RAD51B
2.55e-98FFCP PHASE2:Hg19::chr6:104898467..104898469,-#_4d6b84afac559fdf6a3e7058aacfc675-, p@chr6:104898467..104898469
2.55e-98FFCP PHASE1:Hg19::chr6:104898467..104898469,-#_4d6b84afac559fdf6a3e7058aacfc675p@chr6:104898467..104898469, -
2.55e-98FFCP PHASE1:Hg19::chr8:24530708..24530710,+#_4d6b84afac559fdf6a3e7058aacfc675p@chr8:24530708..24530710, +
2.55e-98FFCP PHASE1:Hg19::chrX:136514398..136514433,-#_4d6b84afac559fdf6a3e7058aacfc675p@chrX:136514398..136514433, -
2.55e-98FFCP PHASE2:Hg19::chr5:157747715..157747717,+#_4d6b84afac559fdf6a3e7058aacfc675p@chr5:157747715..157747717, +
2.55e-98FFCP PHASE2:Hg19::chr18:39821929..39821932,+#_4d6b84afac559fdf6a3e7058aacfc675p@chr18:39821929..39821932, +
2.55e-98FFCP PHASE2:Hg19::chr14:68375236..68375240,+#_4d6b84afac559fdf6a3e7058aacfc675p9@RAD51B
2.55e-98FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_4d6b84afac559fdf6a3e7058aacfc675p@chr22:36000901..36000903, -
2.55e-98FFCP PHASE1:Hg19::chr18:39821929..39821932,+#_4d6b84afac559fdf6a3e7058aacfc675p@chr18:39821929..39821932, +
2.55e-98FFCP PHASE1:Hg19::chr5:157747715..157747717,+#_4d6b84afac559fdf6a3e7058aacfc675p@chr5:157747715..157747717, +
2.55e-98FFCP PHASE2:Hg19::chr8:24530708..24530710,+#_4d6b84afac559fdf6a3e7058aacfc675p@chr8:24530708..24530710, +
2.55e-98FFCP PHASE2:Hg19::chr2:103287330..103287331,+#_4d6b84afac559fdf6a3e7058aacfc675p@chr2:103287330..103287331, +
2.55e-98FFCP PHASE1:Hg19::chr2:103287330..103287331,+#_4d6b84afac559fdf6a3e7058aacfc675p@chr2:103287330..103287331, +
2.55e-98FFCP PHASE1:Hg19::chr6:70647888..70647891,+#_4d6b84afac559fdf6a3e7058aacfc675p@chr6:70647888..70647891, +
1.23e-66FFCP PHASE1:Hg19::chr2:218844837..218844842,-#_0bcb74ca5e732112580c17562abc51e9p@chr2:218844837..218844842, -
1.23e-66FFCP PHASE2:Hg19::chr16:10783399..10783401,+#_0bcb74ca5e732112580c17562abc51e9p@chr16:10783399..10783401, +
1.23e-66FFCP PHASE2:Hg19::chr14:30786806..30786810,-#_0bcb74ca5e732112580c17562abc51e9p@chr14:30786806..30786810, -
1.23e-66FFCP PHASE2:Hg19::chr5:99385820..99385831,-#_0bcb74ca5e732112580c17562abc51e9p@chr5:99385820..99385831, -
1.23e-66FFCP PHASE1:Hg19::chr5:99385820..99385831,-#_0bcb74ca5e732112580c17562abc51e9p@chr5:99385820..99385831, -
1.23e-66FFCP PHASE2:Hg19::chr19:35531882..35531893,-#_0bcb74ca5e732112580c17562abc51e9p@chr19:35531882..35531893, -
1.23e-66FFCP PHASE1:Hg19::chr2:26508626..26508627,+#_0bcb74ca5e732112580c17562abc51e9p@chr2:26508626..26508627, +
1.23e-66FFCP PHASE1:Hg19::chr2:123518588..123518591,+#_0bcb74ca5e732112580c17562abc51e9p@chr2:123518588..123518591, +
1.23e-66FFCP PHASE1:Hg19::chr19:35531882..35531893,-#_0bcb74ca5e732112580c17562abc51e9p@chr19:35531882..35531893, -
1.23e-66FFCP PHASE2:Hg19::chr2:26508626..26508627,+#_0bcb74ca5e732112580c17562abc51e9p@chr2:26508626..26508627, +
1.23e-66FFCP PHASE1:Hg19::chr14:30786806..30786810,-#_0bcb74ca5e732112580c17562abc51e9p@chr14:30786806..30786810, -
1.23e-66FFCP PHASE2:Hg19::chr2:218844837..218844842,-#_0bcb74ca5e732112580c17562abc51e9p@chr2:218844837..218844842, -
1.23e-66FFCP PHASE1:Hg19::chr16:10783399..10783401,+#_0bcb74ca5e732112580c17562abc51e9p@chr16:10783399..10783401, +
1.23e-66FFCP PHASE2:Hg19::chr17:77026478..77026512,+#_0bcb74ca5e732112580c17562abc51e9p@chr17:77026478..77026512, +
1.23e-66FFCP PHASE1:Hg19::chr17:77026478..77026512,+#_0bcb74ca5e732112580c17562abc51e9p@chr17:77026478..77026512, +
1.23e-66FFCP PHASE2:Hg19::chr2:123518588..123518591,+#_0bcb74ca5e732112580c17562abc51e9p@chr2:123518588..123518591, +
2.39e-66FFCP PHASE1:Hg19::chr6:104465140..104465144,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr6:104465140..104465144, -
2.39e-66FFCP PHASE2:Hg19::chr2:238859791..238859796,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr2:238859791..238859796, -
2.39e-66FFCP PHASE2:Hg19::chr1:203150041..203150049,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr1:203150041..203150049, -
2.39e-66FFCP PHASE1:Hg19::chr1:203150041..203150049,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr1:203150041..203150049, -
2.39e-66FFCP PHASE2:Hg19::chr1:1154360..1154365,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr1:1154360..1154365, -
2.39e-66FFCP PHASE2:Hg19::chr8:127508635..127508640,+#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr8:127508635..127508640, +
2.39e-66FFCP PHASE1:Hg19::chr8:127508635..127508640,+#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr8:127508635..127508640, +
2.39e-66FFCP PHASE1:Hg19::chr3:135043585..135043591,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr3:135043585..135043591, -
2.39e-66FFCP PHASE1:Hg19::chr13:56591781..56591785,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr13:56591781..56591785, -
2.39e-66FFCP PHASE2:Hg19::chr5:175084679..175084689,+#_dd79ea92f8174e44b2fecb66e95d0ae7p4@HRH2
2.39e-66FFCP PHASE1:Hg19::chr5:175084679..175084689,+#_dd79ea92f8174e44b2fecb66e95d0ae7p4@HRH2
2.39e-66FFCP PHASE2:Hg19::chr13:56591781..56591785,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr13:56591781..56591785, -
2.39e-66FFCP PHASE2:Hg19::chr5:150006500..150006508,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr5:150006500..150006508, -
2.39e-66FFCP PHASE2:Hg19::chr1:1154830..1154841,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr1:1154830..1154841, -
2.39e-66FFCP PHASE1:Hg19::chr1:1154360..1154365,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr1:1154360..1154365, -
2.39e-66FFCP PHASE1:Hg19::chr18:40200823..40200829,+#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr18:40200823..40200829, +
2.39e-66FFCP PHASE2:Hg19::chr1:189481131..189481134,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr1:189481131..189481134, -
2.39e-66FFCP PHASE1:Hg19::chr1:189481131..189481134,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr1:189481131..189481134, -
2.39e-66FFCP PHASE2:Hg19::chr18:40200823..40200829,+#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr18:40200823..40200829, +
2.39e-66FFCP PHASE1:Hg19::chr1:1154830..1154841,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr1:1154830..1154841, -
2.39e-66FFCP PHASE1:Hg19::chr10:54464025..54464030,+#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr10:54464025..54464030, +
2.39e-66FFCP PHASE1:Hg19::chr2:42043637..42043640,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr2:42043637..42043640, -
2.39e-66FFCP PHASE1:Hg19::chr10:63204408..63204412,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr10:63204408..63204412, -
2.39e-66FFCP PHASE1:Hg19::chr5:150006500..150006508,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr5:150006500..150006508, -
2.39e-66FFCP PHASE2:Hg19::chr10:63204408..63204412,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr10:63204408..63204412, -
2.39e-66FFCP PHASE2:Hg19::chr3:135043585..135043591,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr3:135043585..135043591, -
2.39e-66FFCP PHASE1:Hg19::chr2:238859791..238859796,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr2:238859791..238859796, -
2.39e-66FFCP PHASE2:Hg19::chr19:44414731..44414733,+#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr19:44414731..44414733, +
2.39e-66FFCP PHASE1:Hg19::chr19:7795730..7795740,-#_dd79ea92f8174e44b2fecb66e95d0ae7p5@CLEC4G
2.39e-66FFCP PHASE1:Hg19::chr7:54897467..54897468,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr7:54897467..54897468, -
2.39e-66FFCP PHASE2:Hg19::chr7:54897467..54897468,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr7:54897467..54897468, -
2.39e-66FFCP PHASE1:Hg19::chr19:44414731..44414733,+#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr19:44414731..44414733, +
2.39e-66FFCP PHASE2:Hg19::chr10:54464025..54464030,+#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr10:54464025..54464030, +
2.39e-66FFCP PHASE2:Hg19::chr19:7795730..7795740,-#_dd79ea92f8174e44b2fecb66e95d0ae7p5@CLEC4G
2.39e-66FFCP PHASE2:Hg19::chr6:104465140..104465144,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr6:104465140..104465144, -
2.39e-66FFCP PHASE2:Hg19::chr2:42043637..42043640,-#_dd79ea92f8174e44b2fecb66e95d0ae7p@chr2:42043637..42043640, -
4.66e-66FFCP PHASE1:Hg19::chr2:16526810..16526812,-#_1c49a9fe85023e32f0b4347ac82e46f5p@chr2:16526810..16526812, -
4.66e-66FFCP PHASE2:Hg19::chr1:11905799..11905806,-#_1c49a9fe85023e32f0b4347ac82e46f5p@chr1:11905799..11905806, -
4.66e-66FFCP PHASE2:Hg19::chr9:86211495..86211499,-#_1c49a9fe85023e32f0b4347ac82e46f5p1@ENST00000362613
4.66e-66FFCP PHASE2:Hg19::chr4:88042092..88042099,-#_1c49a9fe85023e32f0b4347ac82e46f5p@chr4:88042092..88042099, -
4.66e-66FFCP PHASE2:Hg19::chr10:37485037..37485044,+#_1c49a9fe85023e32f0b4347ac82e46f5p@chr10:37485037..37485044, +
4.66e-66FFCP PHASE1:Hg19::chr21:40459334..40459341,+#_1c49a9fe85023e32f0b4347ac82e46f5p@chr21:40459334..40459341, +
4.66e-66FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_1c49a9fe85023e32f0b4347ac82e46f5p@chr21:40459334..40459341, +
4.66e-66FFCP PHASE1:Hg19::chr1:11905799..11905806,-#_1c49a9fe85023e32f0b4347ac82e46f5p@chr1:11905799..11905806, -
4.66e-66FFCP PHASE2:Hg19::chr2:16526810..16526812,-#_1c49a9fe85023e32f0b4347ac82e46f5p@chr2:16526810..16526812, -
4.66e-66FFCP PHASE2:Hg19::chr3:39233987..39233993,-#_1c49a9fe85023e32f0b4347ac82e46f5p14@XIRP1
4.66e-66FFCP PHASE2:Hg19::chr8:135501299..135501346,-#_1c49a9fe85023e32f0b4347ac82e46f5p@chr8:135501299..135501346, -
4.66e-66FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_1c49a9fe85023e32f0b4347ac82e46f5p9@NPPA
4.66e-66FFCP PHASE1:Hg19::chr8:135501299..135501346,-#_1c49a9fe85023e32f0b4347ac82e46f5p@chr8:135501299..135501346, -
4.66e-66FFCP PHASE2:Hg19::chr13:25345488..25345491,+#_1c49a9fe85023e32f0b4347ac82e46f5p@chr13:25345488..25345491, +
4.66e-66FFCP PHASE1:Hg19::chr4:88042092..88042099,-#_1c49a9fe85023e32f0b4347ac82e46f5p@chr4:88042092..88042099, -
4.66e-66FFCP PHASE1:Hg19::chr3:39233987..39233993,-#_1c49a9fe85023e32f0b4347ac82e46f5p14@XIRP1
4.66e-66FFCP PHASE1:Hg19::chr13:25345488..25345491,+#_1c49a9fe85023e32f0b4347ac82e46f5p@chr13:25345488..25345491, +
4.66e-66FFCP PHASE1:Hg19::chr9:86211495..86211499,-#_1c49a9fe85023e32f0b4347ac82e46f5p1@ENST00000362613