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UBERON:0002110

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Name:gallbladder
Namespace:FANTOM
Definition:"a small organ that aids digestion and stores bile produced by the liver[WP]. Organ with organ cavity which is continuous proximally with the cystic duct and distally terminates in the fundus of the gallbladder[FMA]." [FMA:7202, Wikipedia:Gallbladder]
Xrefs:
links:

AAO:0010114
BTO:0000493
EFO:0000853
EHDAA2:0000699
EHDAA:8062
EMAPA:17202
EV:0100090
FMA:7202
galen:Gallbladder
[1]
[ 200px-Abdomal_organs.svg.png 200px-Abdomal_organs.svg.png]
MA:0000356
MAT:0000072
MESH:A.03.159.439
MIAA:0000072
ncithesaurus:Gallbladder
OpenCyc:Mx4rvVkGr5wpEbGdrcN5Y29ycA
SCTID:181269000
TAO:0000208
VHOG:0000221
XAO:0000135

ZFA:0000208
Synonyms: "gall bladder" EXACT []
"vesica fellea; vesica biliaris" RELATED LATIN [Wikipedia:Gallbladder]
Comments:Rats do not have a gallbladder, but produce bile. The bile flows directly from the liver through the (hepatic) bile duct into the small intestine (Hebel and Stromberg, 1988)
Alt_id: UBERON:FMA_7202-MA_0000356-MIAA_0000072-XAO_0000135-ZFA_0000208
Subset: organ_slim
uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0004119(endoderm-derived structure),UBERON:0013765(digestive system element),UBERON:0017672(abdominal viscera)
develops_from:UBERON:0004912(biliary bud),UBERON:0006242(gall bladder primordium)
part_of:UBERON:0000916(abdomen),UBERON:0001173(biliary tree)



Children

derives from:FF:0010198 (human gall bladder - adult sample)
part of:CL:1000415 (epithelial cell of gall bladder)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002110 (gallbladder), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.39e-66FFCP PHASE2:Hg19::chr2:42157397..42157411,-#_413be64bdf0b645679af706b510beabap@chr2:42157397..42157411, -
2.39e-66FFCP PHASE2:Hg19::chr10:103952998..103953003,-#_413be64bdf0b645679af706b510beabap@chr10:103952998..103953003, -
2.39e-66FFCP PHASE2:Hg19::chr20:4100596..4100603,+#_413be64bdf0b645679af706b510beabap5@BC027448
2.39e-66FFCP PHASE1:Hg19::chr14:38091563..38091607,+#_413be64bdf0b645679af706b510beabap@chr14:38091563..38091607, +
2.39e-66FFCP PHASE2:Hg19::chr11:1247434..1247435,+#_413be64bdf0b645679af706b510beabap@chr11:1247434..1247435, +
2.39e-66FFCP PHASE2:Hg19::chr9:95737958..95737978,+#_413be64bdf0b645679af706b510beabap@chr9:95737958..95737978, +
2.39e-66FFCP PHASE2:Hg19::chr14:103470614..103470619,-#_413be64bdf0b645679af706b510beabap17@CDC42BPB
2.39e-66FFCP PHASE1:Hg19::chr20:4100562..4100570,+#_413be64bdf0b645679af706b510beabap4@BC027448
2.39e-66FFCP PHASE2:Hg19::chr21:43783664..43783667,+#_413be64bdf0b645679af706b510beabap@chr21:43783664..43783667, +
2.39e-66FFCP PHASE2:Hg19::chr14:38091563..38091607,+#_413be64bdf0b645679af706b510beabap@chr14:38091563..38091607, +
2.39e-66FFCP PHASE1:Hg19::chr2:42157172..42157179,-#_413be64bdf0b645679af706b510beabap@chr2:42157172..42157179, -
2.39e-66FFCP PHASE2:Hg19::chr18:2351233..2351242,+#_413be64bdf0b645679af706b510beabap@chr18:2351233..2351242, +
2.39e-66FFCP PHASE1:Hg19::chr14:103470614..103470619,-#_413be64bdf0b645679af706b510beabap17@CDC42BPB
2.39e-66FFCP PHASE1:Hg19::chr20:4100596..4100603,+#_413be64bdf0b645679af706b510beabap5@BC027448
2.39e-66FFCP PHASE1:Hg19::chr3:145127555..145127558,+#_413be64bdf0b645679af706b510beabap@chr3:145127555..145127558, +
2.39e-66FFCP PHASE1:Hg19::chr18:2351233..2351242,+#_413be64bdf0b645679af706b510beabap@chr18:2351233..2351242, +
2.39e-66FFCP PHASE1:Hg19::chr3:193561605..193561612,-#_413be64bdf0b645679af706b510beabap3@ENST00000439074
2.39e-66FFCP PHASE1:Hg19::chr2:42157397..42157411,-#_413be64bdf0b645679af706b510beabap@chr2:42157397..42157411, -
2.39e-66FFCP PHASE1:Hg19::chr11:1252161..1252166,+#_413be64bdf0b645679af706b510beabap@chr11:1252161..1252166, +
2.39e-66FFCP PHASE2:Hg19::chr3:145127555..145127558,+#_413be64bdf0b645679af706b510beabap@chr3:145127555..145127558, +
2.39e-66FFCP PHASE2:Hg19::chr4:26491064..26491072,-#_413be64bdf0b645679af706b510beabap@chr4:26491064..26491072, -
2.39e-66FFCP PHASE1:Hg19::chr5:25649889..25649911,-#_413be64bdf0b645679af706b510beabap@chr5:25649889..25649911, -
2.39e-66FFCP PHASE1:Hg19::chr21:43783664..43783667,+#_413be64bdf0b645679af706b510beabap@chr21:43783664..43783667, +
2.39e-66FFCP PHASE2:Hg19::chr4:189258158..189258183,-#_413be64bdf0b645679af706b510beabap@chr4:189258158..189258183, -
2.39e-66FFCP PHASE2:Hg19::chr5:25649889..25649911,-#_413be64bdf0b645679af706b510beabap@chr5:25649889..25649911, -
2.39e-66FFCP PHASE2:Hg19::chr2:42157172..42157179,-#_413be64bdf0b645679af706b510beabap@chr2:42157172..42157179, -
2.39e-66FFCP PHASE2:Hg19::chr3:193561605..193561612,-#_413be64bdf0b645679af706b510beabap3@ENST00000439074
2.39e-66FFCP PHASE1:Hg19::chr10:103952998..103953003,-#_413be64bdf0b645679af706b510beabap@chr10:103952998..103953003, -
2.39e-66FFCP PHASE1:Hg19::chr4:26491064..26491072,-#_413be64bdf0b645679af706b510beabap@chr4:26491064..26491072, -
2.39e-66FFCP PHASE2:Hg19::chr20:4100562..4100570,+#_413be64bdf0b645679af706b510beabap4@BC027448
2.39e-66FFCP PHASE1:Hg19::chr11:1247434..1247435,+#_413be64bdf0b645679af706b510beabap@chr11:1247434..1247435, +
2.39e-66FFCP PHASE2:Hg19::chr11:1252161..1252166,+#_413be64bdf0b645679af706b510beabap@chr11:1252161..1252166, +
2.39e-66FFCP PHASE1:Hg19::chr4:117626532..117626537,+#_413be64bdf0b645679af706b510beabap@chr4:117626532..117626537, +
2.39e-66FFCP PHASE1:Hg19::chr9:95737958..95737978,+#_413be64bdf0b645679af706b510beabap@chr9:95737958..95737978, +
2.39e-66FFCP PHASE1:Hg19::chr4:189258158..189258183,-#_413be64bdf0b645679af706b510beabap@chr4:189258158..189258183, -
2.39e-66FFCP PHASE2:Hg19::chr4:117626532..117626537,+#_413be64bdf0b645679af706b510beabap@chr4:117626532..117626537, +
2.4e-66FFCP PHASE1:Hg19::chr17:79429043..79429051,-#_870d2f600bfe77f0f94baa18cb879f51p@chr17:79429043..79429051, -
2.4e-66FFCP PHASE2:Hg19::chr17:79429043..79429051,-#_870d2f600bfe77f0f94baa18cb879f51p@chr17:79429043..79429051, -
4.89e-53FFCP PHASE1:Hg19::chr11:111154964..111154975,+#_391594abcc235208f971631c9bb79801p4@C11orf53
4.89e-53FFCP PHASE2:Hg19::chr11:111154964..111154975,+#_391594abcc235208f971631c9bb79801p4@C11orf53
4.27e-34FFCP PHASE1:Hg19::chr7:114026271..114026287,-#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr7:114026271..114026287, -
4.27e-34FFCP PHASE2:Hg19::chr18:35871337..35871346,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr18:35871337..35871346, +
4.27e-34FFCP PHASE2:Hg19::chr11:1263382..1263385,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr11:1263382..1263385, +
4.27e-34FFCP PHASE1:Hg19::chr17:67559529..67559532,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr17:67559529..67559532, +
4.27e-34FFCP PHASE1:Hg19::chr11:1247439..1247442,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr11:1247439..1247442, +
4.27e-34FFCP PHASE2:Hg19::chr11:1260725..1260734,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr11:1260725..1260734, +
4.27e-34FFCP PHASE2:Hg19::chr6:13191432..13191436,-#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr6:13191432..13191436, -
4.27e-34FFCP PHASE2:Hg19::chr12:113448406..113448411,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp14@OAS2
4.27e-34FFCP PHASE2:Hg19::chr4:190861941..190861951,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp3@FRG1
4.27e-34FFCP PHASE1:Hg19::chr18:35871337..35871346,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr18:35871337..35871346, +
4.27e-34FFCP PHASE2:Hg19::chr10:124050589..124050596,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp15@BTBD16
4.27e-34FFCP PHASE1:Hg19::chr19:28401158..28401162,-#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr19:28401158..28401162, -
4.27e-34FFCP PHASE2:Hg19::chr19:28401158..28401162,-#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr19:28401158..28401162, -
4.27e-34FFCP PHASE2:Hg19::chr5:147644551..147644576,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr5:147644551..147644576, +
4.27e-34FFCP PHASE2:Hg19::chr21:43770332..43770340,-#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr21:43770332..43770340, -
4.27e-34FFCP PHASE1:Hg19::chr12:113448406..113448411,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp14@OAS2
4.27e-34FFCP PHASE2:Hg19::chr17:67559529..67559532,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr17:67559529..67559532, +
4.27e-34FFCP PHASE1:Hg19::chr5:147644551..147644576,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr5:147644551..147644576, +
4.27e-34FFCP PHASE2:Hg19::chr18:2351165..2351175,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr18:2351165..2351175, +
4.27e-34FFCP PHASE2:Hg19::chr11:1247439..1247442,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr11:1247439..1247442, +
4.27e-34FFCP PHASE1:Hg19::chr1:187929602..187929615,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr1:187929602..187929615, +
4.27e-34FFCP PHASE1:Hg19::chr18:2351165..2351175,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr18:2351165..2351175, +
4.27e-34FFCP PHASE1:Hg19::chr5:111570472..111570478,-#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr5:111570472..111570478, -
4.27e-34FFCP PHASE2:Hg19::chr7:114026271..114026287,-#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr7:114026271..114026287, -
4.27e-34FFCP PHASE1:Hg19::chr4:190861941..190861951,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp3@FRG1
4.27e-34FFCP PHASE2:Hg19::chr21:28226981..28227000,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr21:28226981..28227000, +
4.27e-34FFCP PHASE2:Hg19::chr5:147645292..147645302,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr5:147645292..147645302, +
4.27e-34FFCP PHASE1:Hg19::chr11:1262749..1262754,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr11:1262749..1262754, +
4.27e-34FFCP PHASE1:Hg19::chr5:147645292..147645302,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr5:147645292..147645302, +
4.27e-34FFCP PHASE1:Hg19::chr11:86501763..86501768,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp33@PRSS23
4.27e-34FFCP PHASE1:Hg19::chr21:43770332..43770340,-#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr21:43770332..43770340, -
4.27e-34FFCP PHASE2:Hg19::chrX:29431271..29431280,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chrX:29431271..29431280, +
4.27e-34FFCP PHASE2:Hg19::chr1:187929602..187929615,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr1:187929602..187929615, +
4.27e-34FFCP PHASE1:Hg19::chr10:124050589..124050596,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp15@BTBD16
4.27e-34FFCP PHASE1:Hg19::chr9:95737369..95737393,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp18@FGD3
4.27e-34FFCP PHASE1:Hg19::chr11:1263382..1263385,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr11:1263382..1263385, +
4.27e-34FFCP PHASE2:Hg19::chr5:111570472..111570478,-#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr5:111570472..111570478, -
4.27e-34FFCP PHASE2:Hg19::chr11:1262749..1262754,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr11:1262749..1262754, +
4.27e-34FFCP PHASE1:Hg19::chr6:13191432..13191436,-#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr6:13191432..13191436, -
4.27e-34FFCP PHASE1:Hg19::chr11:1260725..1260734,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr11:1260725..1260734, +
4.27e-34FFCP PHASE1:Hg19::chr21:28226981..28227000,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chr21:28226981..28227000, +
4.27e-34FFCP PHASE1:Hg19::chrX:29431271..29431280,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp@chrX:29431271..29431280, +
4.27e-34FFCP PHASE2:Hg19::chr9:95737369..95737393,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp18@FGD3
4.27e-34FFCP PHASE2:Hg19::chr11:86501763..86501768,+#_c885c4a2deb9450aa0d9e9ef4ce0d2bdp33@PRSS23
5.96e-34FFCP PHASE1:Hg19::chr4:59982412..59982425,+#_d9cf2bbf38313bd4cf61edad4ed983aep@chr4:59982412..59982425, +
5.96e-34FFCP PHASE1:Hg19::chr17:37880326..37880328,-#_d9cf2bbf38313bd4cf61edad4ed983aep@chr17:37880326..37880328, -
5.96e-34FFCP PHASE2:Hg19::chr16:34378161..34378168,+#_d9cf2bbf38313bd4cf61edad4ed983aep@chr16:34378161..34378168, +
5.96e-34FFCP PHASE1:Hg19::chr2:27529092..27529098,+#_d9cf2bbf38313bd4cf61edad4ed983aep@chr2:27529092..27529098, +
5.96e-34FFCP PHASE2:Hg19::chr18:55095246..55095262,+#_d9cf2bbf38313bd4cf61edad4ed983aep@chr18:55095246..55095262, +
5.96e-34FFCP PHASE2:Hg19::chr4:175184051..175184061,-#_d9cf2bbf38313bd4cf61edad4ed983aep18@FBXO8
5.96e-34FFCP PHASE2:Hg19::chr14:47289644..47289662,-#_d9cf2bbf38313bd4cf61edad4ed983aep@chr14:47289644..47289662, -
5.96e-34FFCP PHASE2:Hg19::chr7:117355942..117355945,-#_d9cf2bbf38313bd4cf61edad4ed983aep@chr7:117355942..117355945, -
5.96e-34FFCP PHASE2:Hg19::chr4:59982412..59982425,+#_d9cf2bbf38313bd4cf61edad4ed983aep@chr4:59982412..59982425, +
5.96e-34FFCP PHASE1:Hg19::chr18:61420303..61420306,+#_d9cf2bbf38313bd4cf61edad4ed983aep17@SERPINB7
5.96e-34FFCP PHASE2:Hg19::chr5:498417..498421,-#_d9cf2bbf38313bd4cf61edad4ed983aep@chr5:498417..498421, -
5.96e-34FFCP PHASE2:Hg19::chr19:36757642..36757645,+#_d9cf2bbf38313bd4cf61edad4ed983aep@chr19:36757642..36757645, +
5.96e-34FFCP PHASE1:Hg19::chr10:6777736..6777754,-#_d9cf2bbf38313bd4cf61edad4ed983aep@chr10:6777736..6777754, -
5.96e-34FFCP PHASE2:Hg19::chr10:66386701..66386711,-#_d9cf2bbf38313bd4cf61edad4ed983aep@chr10:66386701..66386711, -
5.96e-34FFCP PHASE1:Hg19::chr22:50723475..50723477,-#_d9cf2bbf38313bd4cf61edad4ed983aep@chr22:50723475..50723477, -
5.96e-34FFCP PHASE1:Hg19::chr5:37852067..37852074,-#_d9cf2bbf38313bd4cf61edad4ed983aep@chr5:37852067..37852074, -










Property "Property value" (as page type) with input value "UBPROP:0000001 "Organ attached to the liver which stores bile and empties into the duodenum via the bile duct as needed for digestion.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000002 "relationship type change: differentiates_from endoderm (AAO:0000139) CHANGED TO: develops_from endoderm (UBERON:0000925)[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.