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UBERON:0002336

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Name:corpus callosum
Namespace:FANTOM
Definition:"The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provides communications between the right and left cerebral hemispheres[GO]." [Wikipedia:Corpus_callosum]
Xrefs:
links:

BM:Tel-CC
BTO:0000615
EFO:0001390
EV:0100305
FMA:86464
GAID:683
[ Gray733.png Gray733.png]
[ 200px-Gray733.png 200px-Gray733.png]
MA:0000188
MAT:0000286
MESH:A.08.186.211.730.885.362
MIAA:0000286
ncithesaurus:Corpus_Callosum
NIF_GrossAnatomy:birnlex_1087
OpenCyc:Mx4rvbNzdZwpEbGdrcN5Y29ycA

SCTID:362354006
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_86464-MA_0000188-MIAA_0000286
Subset: uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0002473(intercerebral commissure),UBERON:0005340(dorsal telencephalic commissure)



Children

derives from:FF:0010042 (human corpus callosum - adult sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002336 (corpus callosum), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr15:93827399..93827403,+#_ed833f88e9a8d66008bf96ea9b129878p@chr15:93827399..93827403, +
5.42e-195FFCP PHASE2:Hg19::chr5:60927228..60927236,-#_ed833f88e9a8d66008bf96ea9b129878p3@BC032909, p3@BC032910
5.42e-195FFCP PHASE1:Hg19::chr15:93827399..93827403,+#_ed833f88e9a8d66008bf96ea9b129878p@chr15:93827399..93827403, +
5.42e-195FFCP PHASE1:Hg19::chr17:73689469..73689476,-#_ed833f88e9a8d66008bf96ea9b129878-, p@chr17:73689469..73689476
5.42e-195FFCP PHASE2:Hg19::chr14:36462819..36462832,+#_ed833f88e9a8d66008bf96ea9b129878p@chr14:36462819..36462832, +
5.42e-195FFCP PHASE1:Hg19::chr14:36462819..36462832,+#_ed833f88e9a8d66008bf96ea9b129878p@chr14:36462819..36462832, +
5.42e-195FFCP PHASE2:Hg19::chr17:73689469..73689476,-#_ed833f88e9a8d66008bf96ea9b129878p@chr17:73689469..73689476, -
5.42e-195FFCP PHASE1:Hg19::chr5:60927228..60927236,-#_ed833f88e9a8d66008bf96ea9b129878p3@BC032909, p3@BC032910
9.37e-99FFCP PHASE2:Hg19::chr14:33926303..33926307,-#_bb8da58e7f7698d9d6bfb290141b97acp@chr14:33926303..33926307, -
9.37e-99FFCP PHASE2:Hg19::chr2:232548018..232548022,-#_bb8da58e7f7698d9d6bfb290141b97acp@chr2:232548018..232548022, -
9.37e-99FFCP PHASE1:Hg19::chr2:232548018..232548022,-#_bb8da58e7f7698d9d6bfb290141b97acp@chr2:232548018..232548022, -
9.37e-99FFCP PHASE1:Hg19::chr14:33926303..33926307,-#_bb8da58e7f7698d9d6bfb290141b97acp@chr14:33926303..33926307, -
9.37e-99FFCP PHASE1:Hg19::chr12:78359873..78359882,+#_bb8da58e7f7698d9d6bfb290141b97acp41@NAV3
9.37e-99FFCP PHASE1:Hg19::chr11:110248322..110248329,-#_bb8da58e7f7698d9d6bfb290141b97acp@chr11:110248322..110248329, -
9.37e-99FFCP PHASE2:Hg19::chr11:110248322..110248329,-#_bb8da58e7f7698d9d6bfb290141b97acp@chr11:110248322..110248329, -
9.37e-99FFCP PHASE2:Hg19::chr12:78359873..78359882,+#_bb8da58e7f7698d9d6bfb290141b97acp41@NAV3
2.55e-98FFCP PHASE1:Hg19::chr3:15374659..15374696,-#_5a6993aaaad0bc0de363e3792aff3f07p10@SH3BP5
2.55e-98FFCP PHASE1:Hg19::chr19:35788742..35788752,+#_5a6993aaaad0bc0de363e3792aff3f07p@chr19:35788742..35788752, +
2.55e-98FFCP PHASE2:Hg19::chr19:35788742..35788752,+#_5a6993aaaad0bc0de363e3792aff3f07p@chr19:35788742..35788752, +
2.55e-98FFCP PHASE2:Hg19::chr3:15374659..15374696,-#_5a6993aaaad0bc0de363e3792aff3f07p10@SH3BP5
1.23e-66FFCP PHASE1:Hg19::chr17:72823919..72823924,-#_3354886a7566fe1fac078e463b1bd3c7p@chr17:72823919..72823924, -
1.23e-66FFCP PHASE2:Hg19::chr10:73479518..73479527,-#_3354886a7566fe1fac078e463b1bd3c7p5@C10orf105
1.23e-66FFCP PHASE1:Hg19::chr10:73479518..73479527,-#_3354886a7566fe1fac078e463b1bd3c7p5@C10orf105
1.23e-66FFCP PHASE1:Hg19::chr12:78359680..78359686,+#_3354886a7566fe1fac078e463b1bd3c7p32@NAV3
1.23e-66FFCP PHASE2:Hg19::chr12:78359680..78359686,+#_3354886a7566fe1fac078e463b1bd3c7p32@NAV3
1.23e-66FFCP PHASE1:Hg19::chr8:42037488..42037504,+#_3354886a7566fe1fac078e463b1bd3c7p@chr8:42037488..42037504, +
1.23e-66FFCP PHASE2:Hg19::chr8:42037488..42037504,+#_3354886a7566fe1fac078e463b1bd3c7p@chr8:42037488..42037504, +
1.23e-66FFCP PHASE2:Hg19::chr17:72823919..72823924,-#_3354886a7566fe1fac078e463b1bd3c7-, p@chr17:72823919..72823924
1.23e-66FFCP PHASE2:Hg19::chr7:124391226..124391235,-#_3354886a7566fe1fac078e463b1bd3c7p@chr7:124391226..124391235, -
1.23e-66FFCP PHASE1:Hg19::chr7:124391226..124391235,-#_3354886a7566fe1fac078e463b1bd3c7p@chr7:124391226..124391235, -
2.39e-66FFCP PHASE2:Hg19::chr6:163681762..163681767,+#_a2352c18e2ad7069f58cc70d92ccd3b7p@chr6:163681762..163681767, +
2.39e-66FFCP PHASE2:Hg19::chr10:61043452..61043467,-#_a2352c18e2ad7069f58cc70d92ccd3b7p16@FAM13C
2.39e-66FFCP PHASE1:Hg19::chr6:163681762..163681767,+#_a2352c18e2ad7069f58cc70d92ccd3b7p@chr6:163681762..163681767, +
2.39e-66FFCP PHASE1:Hg19::chr10:61043452..61043467,-#_a2352c18e2ad7069f58cc70d92ccd3b7p16@FAM13C
2.39e-66FFCP PHASE1:Hg19::chr10:25012236..25012245,-#_a2352c18e2ad7069f58cc70d92ccd3b7p24@ARHGAP21
2.39e-66FFCP PHASE2:Hg19::chr10:25012236..25012245,-#_a2352c18e2ad7069f58cc70d92ccd3b7p24@ARHGAP21
4.66e-66FFCP PHASE1:Hg19::chr4:645709..645712,+#_4ee627d5077a3cbfdb30934599a186f7p15@PDE6B
4.66e-66FFCP PHASE2:Hg19::chr5:35089832..35089839,-#_4ee627d5077a3cbfdb30934599a186f7p26@PRLR
4.66e-66FFCP PHASE1:Hg19::chr8:101522298..101522305,-#_4ee627d5077a3cbfdb30934599a186f7p@chr8:101522298..101522305, -
4.66e-66FFCP PHASE1:Hg19::chr5:35089799..35089804,-#_4ee627d5077a3cbfdb30934599a186f7p20@PRLR
4.66e-66FFCP PHASE1:Hg19::chr7:129015806..129015815,+#_4ee627d5077a3cbfdb30934599a186f7p@chr7:129015806..129015815, +
4.66e-66FFCP PHASE2:Hg19::chr4:174293011..174293022,-#_4ee627d5077a3cbfdb30934599a186f7-, p@chr4:174293011..174293022
4.66e-66FFCP PHASE1:Hg19::chr17:40120071..40120085,+#_4ee627d5077a3cbfdb30934599a186f7p15@CNP
4.66e-66FFCP PHASE1:Hg19::chr7:129012882..129012891,-#_4ee627d5077a3cbfdb30934599a186f7p@chr7:129012882..129012891, -
4.66e-66FFCP PHASE1:Hg19::chr5:35089832..35089839,-#_4ee627d5077a3cbfdb30934599a186f7p26@PRLR
4.66e-66FFCP PHASE2:Hg19::chr8:101522298..101522305,-#_4ee627d5077a3cbfdb30934599a186f7p@chr8:101522298..101522305, -
4.66e-66FFCP PHASE2:Hg19::chr17:40120071..40120085,+#_4ee627d5077a3cbfdb30934599a186f7p15@CNP
4.66e-66FFCP PHASE2:Hg19::chr7:129015806..129015815,+#_4ee627d5077a3cbfdb30934599a186f7p@chr7:129015806..129015815, +
4.66e-66FFCP PHASE1:Hg19::chr14:91199850..91199861,-#_4ee627d5077a3cbfdb30934599a186f7p@chr14:91199850..91199861, -
4.66e-66FFCP PHASE2:Hg19::chr14:91199850..91199861,-#_4ee627d5077a3cbfdb30934599a186f7p@chr14:91199850..91199861, -
4.66e-66FFCP PHASE1:Hg19::chr13:99135698..99135706,+#_4ee627d5077a3cbfdb30934599a186f7p@chr13:99135698..99135706, +
4.66e-66FFCP PHASE2:Hg19::chr13:99135698..99135706,+#_4ee627d5077a3cbfdb30934599a186f7p@chr13:99135698..99135706, +
4.66e-66FFCP PHASE2:Hg19::chr7:129012882..129012891,-#_4ee627d5077a3cbfdb30934599a186f7p@chr7:129012882..129012891, -
4.66e-66FFCP PHASE2:Hg19::chr4:645709..645712,+#_4ee627d5077a3cbfdb30934599a186f7p15@PDE6B
4.66e-66FFCP PHASE1:Hg19::chr4:174293011..174293022,-#_4ee627d5077a3cbfdb30934599a186f7p@chr4:174293011..174293022, -
4.66e-66FFCP PHASE2:Hg19::chr5:35089799..35089804,-#_4ee627d5077a3cbfdb30934599a186f7p20@PRLR
1.46e-50FFCP PHASE2:Hg19::chr6:170571770..170571782,-#_6d25fe9baaebff668cd3511e84028ae1p2@LOC154449
1.46e-50FFCP PHASE1:Hg19::chr6:170571770..170571782,-#_6d25fe9baaebff668cd3511e84028ae1p2@LOC154449
2.42e-50FFCP PHASE2:Hg19::chr7:30202318..30202329,+#_8ac6790f0dc75420471121db97a8bc2fp@chr7:30202318..30202329, +
2.42e-50FFCP PHASE2:Hg19::chr4:74005833..74005844,-#_8ac6790f0dc75420471121db97a8bc2fp@chr4:74005833..74005844, -
2.42e-50FFCP PHASE1:Hg19::chrX:103031196..103031205,-#_8ac6790f0dc75420471121db97a8bc2fp@chrX:103031196..103031205, -
2.42e-50FFCP PHASE1:Hg19::chr11:133996343..133996351,+#_8ac6790f0dc75420471121db97a8bc2fp8@JAM3
2.42e-50FFCP PHASE1:Hg19::chr7:30202318..30202329,+#_8ac6790f0dc75420471121db97a8bc2fp@chr7:30202318..30202329, +
2.42e-50FFCP PHASE1:Hg19::chr4:74005833..74005844,-#_8ac6790f0dc75420471121db97a8bc2fp@chr4:74005833..74005844, -
2.42e-50FFCP PHASE2:Hg19::chr10:7454514..7454525,-#_8ac6790f0dc75420471121db97a8bc2fp@chr10:7454514..7454525, -
2.42e-50FFCP PHASE1:Hg19::chr10:7454514..7454525,-#_8ac6790f0dc75420471121db97a8bc2fp@chr10:7454514..7454525, -
2.42e-50FFCP PHASE2:Hg19::chr19:15751984..15751994,+#_8ac6790f0dc75420471121db97a8bc2fp6@CYP4F3
2.42e-50FFCP PHASE2:Hg19::chr12:106697974..106697990,-#_8ac6790f0dc75420471121db97a8bc2fp31@CKAP4
2.42e-50FFCP PHASE1:Hg19::chr19:15751984..15751994,+#_8ac6790f0dc75420471121db97a8bc2fp6@CYP4F3
2.42e-50FFCP PHASE2:Hg19::chr11:133996343..133996351,+#_8ac6790f0dc75420471121db97a8bc2fp8@JAM3
2.42e-50FFCP PHASE1:Hg19::chr12:106697974..106697990,-#_8ac6790f0dc75420471121db97a8bc2fp31@CKAP4
2.42e-50FFCP PHASE2:Hg19::chrX:103031196..103031205,-#_8ac6790f0dc75420471121db97a8bc2fp@chrX:103031196..103031205, -
3.99e-50FFCP PHASE1:Hg19::chr3:160203278..160203289,-#_562f407e37bd91071ca993577eaf8651p8@TRIM59
3.99e-50FFCP PHASE2:Hg19::chr9:20927844..20927855,+#_562f407e37bd91071ca993577eaf8651p@chr9:20927844..20927855, +
3.99e-50FFCP PHASE2:Hg19::chr3:160203278..160203289,-#_562f407e37bd91071ca993577eaf8651p8@TRIM59
3.99e-50FFCP PHASE1:Hg19::chr17:36726052..36726061,-#_562f407e37bd91071ca993577eaf8651p@chr17:36726052..36726061, -
3.99e-50FFCP PHASE2:Hg19::chr17:36726052..36726061,-#_562f407e37bd91071ca993577eaf8651p@chr17:36726052..36726061, -
3.99e-50FFCP PHASE2:Hg19::chr11:45922629..45922637,+#_562f407e37bd91071ca993577eaf8651p@chr11:45922629..45922637, +
3.99e-50FFCP PHASE1:Hg19::chr9:20927844..20927855,+#_562f407e37bd91071ca993577eaf8651p@chr9:20927844..20927855, +
3.99e-50FFCP PHASE2:Hg19::chr6:164364681..164364684,-#_562f407e37bd91071ca993577eaf8651p@chr6:164364681..164364684, -
3.99e-50FFCP PHASE1:Hg19::chr6:164364681..164364684,-#_562f407e37bd91071ca993577eaf8651p@chr6:164364681..164364684, -
3.99e-50FFCP PHASE1:Hg19::chr11:45922629..45922637,+#_562f407e37bd91071ca993577eaf8651p@chr11:45922629..45922637, +
6.58e-50FFCP PHASE2:Hg19::chr11:117585539..117585541,-#_e0e5fee29c1e978228c28a9778dae381p@chr11:117585539..117585541, -
6.58e-50FFCP PHASE1:Hg19::chr11:67190503..67190512,+#_e0e5fee29c1e978228c28a9778dae381p8@CARNS1
6.58e-50FFCP PHASE1:Hg19::chr6:133119649..133119655,-#_e0e5fee29c1e978228c28a9778dae381p6@C6orf192
6.58e-50FFCP PHASE2:Hg19::chr3:190578500..190578506,-#_e0e5fee29c1e978228c28a9778dae381p@chr3:190578500..190578506, -
6.58e-50FFCP PHASE1:Hg19::chr12:99288459..99288464,-#_e0e5fee29c1e978228c28a9778dae381p38@ANKS1B
6.58e-50FFCP PHASE2:Hg19::chr4:7412700..7412704,+#_e0e5fee29c1e978228c28a9778dae381p@chr4:7412700..7412704, +
6.58e-50FFCP PHASE1:Hg19::chr2:219610931..219610941,+#_e0e5fee29c1e978228c28a9778dae381p13@TTLL4
6.58e-50FFCP PHASE2:Hg19::chr3:10706167..10706179,-#_e0e5fee29c1e978228c28a9778dae381p@chr3:10706167..10706179, -
6.58e-50FFCP PHASE2:Hg19::chr9:112191163..112191174,-#_e0e5fee29c1e978228c28a9778dae381p10@PTPN3
6.58e-50FFCP PHASE2:Hg19::chr2:219610931..219610941,+#_e0e5fee29c1e978228c28a9778dae381p13@TTLL4
6.58e-50FFCP PHASE1:Hg19::chr4:7412700..7412704,+#_e0e5fee29c1e978228c28a9778dae381p@chr4:7412700..7412704, +
6.58e-50FFCP PHASE1:Hg19::chrX:28605300..28605301,+#_e0e5fee29c1e978228c28a9778dae381p8@IL1RAPL1
6.58e-50FFCP PHASE2:Hg19::chr6:133119649..133119655,-#_e0e5fee29c1e978228c28a9778dae381p6@C6orf192
6.58e-50FFCP PHASE2:Hg19::chr12:99288459..99288464,-#_e0e5fee29c1e978228c28a9778dae381p38@ANKS1B
6.58e-50FFCP PHASE1:Hg19::chr3:190578500..190578506,-#_e0e5fee29c1e978228c28a9778dae381p@chr3:190578500..190578506, -
6.58e-50FFCP PHASE2:Hg19::chrX:28605300..28605301,+#_e0e5fee29c1e978228c28a9778dae381p8@IL1RAPL1
6.58e-50FFCP PHASE2:Hg19::chr11:67190503..67190512,+#_e0e5fee29c1e978228c28a9778dae381p8@CARNS1
6.58e-50FFCP PHASE1:Hg19::chr9:112191163..112191174,-#_e0e5fee29c1e978228c28a9778dae381p10@PTPN3