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UBERON:0002530

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Name:gland
Namespace:FANTOM
Definition:"A gland is an organ in an animal's body that synthesizes a substance for release such as hormones or breast milk, often into the bloodstream (endocrine gland) or into cavities inside the body or its outer surface (exocrine gland). A gland is an organ specialised for secretion[GO]." [Wikipedia:Gland]
Xrefs:
links:

AAO:0000212
AEO:0000096
BTO:0000522
EFO:0000797
EHDAA2:0003096
EHDAA:2161
EHDAA:2181
EHDAA:2967
EHDAA:4475
EHDAA:6522
EMAPA:18425
FMA:86294
galen:Gland
HAO:0000375
[ Gray1026.png Gray1026.png]
MAT:0000021
MIAA:0000021
ncithesaurus:Gland
OpenCyc:Mx4rwP3vyJwpEbGdrcN5Y29ycA

SCTID:134358001
Synonyms: "Druese" RELATED [BTO:0000522]
"glandula" RELATED LATIN [Wikipedia:Gland]
"glandula" RELATED [BTO:0000522]
Comments:none of the major model vertebrate ontologies have a class called gland. Is this class superfluous? Also GO says secretion by tissue.
Alt_id: UBERON:MIAA_0000021
Subset: uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000062(organ)



Children

is a:UBERON:0002365 (exocrine gland),UBERON:0002368 (endocrine gland),UBERON:0003296 (gland of diencephalon),UBERON:0003297 (gland of integumental system),UBERON:0003408 (gland of gut),UBERON:0003937 (sex gland),UBERON:0005058 (hemolymphoid system gland)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002530 (gland), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
3.87e-27FFCP PHASE1:Hg19::chr17:7017634..7017649,-#_af320fad8bbbbc822eb3bc867c9416bcp7@ASGR2
3.87e-27FFCP PHASE2:Hg19::chr17:7017634..7017649,-#_af320fad8bbbbc822eb3bc867c9416bcp7@ASGR2
8.82e-27FFCP PHASE2:Hg19::chr2:21233797..21233804,-#_c3a9689906e1ca234aaedeb5ca13d00cp58@APOB
8.82e-27FFCP PHASE2:Hg19::chr8:144417558..144417572,-#_c3a9689906e1ca234aaedeb5ca13d00cp7@TOP1MT
8.82e-27FFCP PHASE1:Hg19::chr2:21233797..21233804,-#_c3a9689906e1ca234aaedeb5ca13d00cp58@APOB
8.82e-27FFCP PHASE1:Hg19::chr8:144417558..144417572,-#_c3a9689906e1ca234aaedeb5ca13d00cp7@TOP1MT
9.86e-27FFCP PHASE1:Hg19::chr6:64231600..64231615,+#_606d6e18c29e3305a22338515033ab8fp24@PTP4A1
9.86e-27FFCP PHASE2:Hg19::chr6:64231600..64231615,+#_606d6e18c29e3305a22338515033ab8fp24@PTP4A1
4.5e-26FFCP PHASE2:Hg19::chr12:100867777..100867788,+#_1f708f1b0e963e885d48159e192c3cb4p5@NR1H4
4.5e-26FFCP PHASE1:Hg19::chr12:100867777..100867788,+#_1f708f1b0e963e885d48159e192c3cb4p5@NR1H4
6.7e-26FFCP PHASE2:Hg19::chr6:8652489..8652515,+#_070e81cac69435d48e1040471b20a1d5p1@HULC
6.7e-26FFCP PHASE1:Hg19::chr6:8652489..8652515,+#_070e81cac69435d48e1040471b20a1d5p1@HULC
1.74e-25FFCP PHASE1:Hg19::chr12:100867653..100867677,+#_2e14f555ec76ea2bafb6405fde4bff88p2@NR1H4
1.74e-25FFCP PHASE2:Hg19::chr12:100867653..100867677,+#_2e14f555ec76ea2bafb6405fde4bff88p2@NR1H4
5.7e-25FFCP PHASE1:Hg19::chr1:161192171..161192185,-#_eba1d067b6f0657d9ab34643f572ef65p@chr1:161192171..161192185, -
5.7e-25FFCP PHASE2:Hg19::chr1:161192171..161192185,-#_eba1d067b6f0657d9ab34643f572ef65p@chr1:161192171..161192185, -
3.01e-24FFCP PHASE1:Hg19::chrX:153769426..153769436,+#_ccb45a0385fc4f77f132cb08d0300041p18@IKBKG
3.01e-24FFCP PHASE2:Hg19::chrX:153769426..153769436,+#_ccb45a0385fc4f77f132cb08d0300041p18@IKBKG
3.56e-24FFCP PHASE2:Hg19::chr10:7745167..7745178,+#_6308949328cc540603abfa3bf8480b9ap3@ITIH2
3.56e-24FFCP PHASE1:Hg19::chr10:7745167..7745178,+#_6308949328cc540603abfa3bf8480b9ap3@ITIH2
3.98e-24FFCP PHASE1:Hg19::chr18:60206766..60206778,+#_8b6ef6a557e4d819bb884c1a13bf8e6dp17@ZCCHC2
3.98e-24FFCP PHASE2:Hg19::chr18:60206766..60206778,+#_8b6ef6a557e4d819bb884c1a13bf8e6dp17@ZCCHC2
4.45e-24FFCP PHASE2:Hg19::chr2:97216132..97216143,+#_1f4e6c47acdce80fcf2f5896ffd87820p@chr2:97216132..97216143, +
4.45e-24FFCP PHASE1:Hg19::chr2:97216132..97216143,+#_1f4e6c47acdce80fcf2f5896ffd87820p@chr2:97216132..97216143, +
1.05e-23FFCP PHASE2:Hg19::chr2:21228233..21228242,-#_fd864e217277af619b56353c58f91eb6p56@APOB
1.05e-23FFCP PHASE2:Hg19::chr2:21239379..21239390,-#_fd864e217277af619b56353c58f91eb6p@chr2:21239379..21239390, -
1.05e-23FFCP PHASE2:Hg19::chr2:21258509..21258518,-#_fd864e217277af619b56353c58f91eb6p@chr2:21258509..21258518, -
1.05e-23FFCP PHASE1:Hg19::chr10:82049381..82049384,-#_fd864e217277af619b56353c58f91eb6p9@MAT1A
1.05e-23FFCP PHASE1:Hg19::chr20:10349456..10349475,-#_fd864e217277af619b56353c58f91eb6p1@ENST00000421143
1.05e-23FFCP PHASE1:Hg19::chr20:22566089..22566097,-#_fd864e217277af619b56353c58f91eb6p6@FOXA2
1.05e-23FFCP PHASE1:Hg19::chr2:21228233..21228242,-#_fd864e217277af619b56353c58f91eb6p56@APOB
1.05e-23FFCP PHASE1:Hg19::chr2:21239379..21239390,-#_fd864e217277af619b56353c58f91eb6p@chr2:21239379..21239390, -
1.05e-23FFCP PHASE1:Hg19::chr2:21258509..21258518,-#_fd864e217277af619b56353c58f91eb6p@chr2:21258509..21258518, -
1.05e-23FFCP PHASE2:Hg19::chr20:10349456..10349475,-#_fd864e217277af619b56353c58f91eb6p1@ENST00000421143
1.05e-23FFCP PHASE2:Hg19::chr20:22566089..22566097,-#_fd864e217277af619b56353c58f91eb6p6@FOXA2
1.05e-23FFCP PHASE2:Hg19::chr10:82049381..82049384,-#_fd864e217277af619b56353c58f91eb6p9@MAT1A
1.11e-23FFCP PHASE2:Hg19::chr1:230846000..230846009,-#_ea4a26807de787e18d368f67ad0cad15p@chr1:230846000..230846009, -
1.11e-23FFCP PHASE2:Hg19::chr14:94844853..94844862,-#_ea4a26807de787e18d368f67ad0cad15p35@SERPINA1
1.11e-23FFCP PHASE1:Hg19::chr14:94844853..94844862,-#_ea4a26807de787e18d368f67ad0cad15p35@SERPINA1
1.11e-23FFCP PHASE1:Hg19::chr1:230846000..230846009,-#_ea4a26807de787e18d368f67ad0cad15p@chr1:230846000..230846009, -
1.2e-23FFCP PHASE1:Hg19::chr10:7763609..7763619,+#_58249c8d7ebb9da5824d8da39aa8e680p@chr10:7763609..7763619, +
1.2e-23FFCP PHASE1:Hg19::chr12:57828432..57828442,+#_58249c8d7ebb9da5824d8da39aa8e680p7@INHBC
1.2e-23FFCP PHASE1:Hg19::chr17:7082861..7082882,-#_58249c8d7ebb9da5824d8da39aa8e680p9@ASGR1
1.2e-23FFCP PHASE1:Hg19::chr2:20793103..20793113,-#_58249c8d7ebb9da5824d8da39aa8e680p@chr2:20793103..20793113, -
1.2e-23FFCP PHASE1:Hg19::chr2:21230675..21230682,-#_58249c8d7ebb9da5824d8da39aa8e680p51@APOB
1.2e-23FFCP PHASE1:Hg19::chr2:21231676..21231681,-#_58249c8d7ebb9da5824d8da39aa8e680p75@APOB
1.2e-23FFCP PHASE1:Hg19::chr2:21232865..21232870,-#_58249c8d7ebb9da5824d8da39aa8e680p10@BC172787
1.2e-23FFCP PHASE1:Hg19::chr2:21234502..21234510,-#_58249c8d7ebb9da5824d8da39aa8e680p43@APOB
1.2e-23FFCP PHASE1:Hg19::chr2:21256369..21256378,-#_58249c8d7ebb9da5824d8da39aa8e680p@chr2:21256369..21256378, -
1.2e-23FFCP PHASE1:Hg19::chr2:44066386..44066398,-#_58249c8d7ebb9da5824d8da39aa8e680p6@ABCG5
1.2e-23FFCP PHASE2:Hg19::chr10:7763609..7763619,+#_58249c8d7ebb9da5824d8da39aa8e680p@chr10:7763609..7763619, +
1.2e-23FFCP PHASE2:Hg19::chr2:44066386..44066398,-#_58249c8d7ebb9da5824d8da39aa8e680p6@ABCG5
1.2e-23FFCP PHASE2:Hg19::chr17:7082861..7082882,-#_58249c8d7ebb9da5824d8da39aa8e680p9@ASGR1
1.2e-23FFCP PHASE2:Hg19::chr2:20793103..20793113,-#_58249c8d7ebb9da5824d8da39aa8e680p@chr2:20793103..20793113, -
1.2e-23FFCP PHASE2:Hg19::chr2:21230675..21230682,-#_58249c8d7ebb9da5824d8da39aa8e680p51@APOB
1.2e-23FFCP PHASE2:Hg19::chr2:21231676..21231681,-#_58249c8d7ebb9da5824d8da39aa8e680p75@APOB
1.2e-23FFCP PHASE2:Hg19::chr2:21232865..21232870,-#_58249c8d7ebb9da5824d8da39aa8e680p10@BC172787
1.2e-23FFCP PHASE2:Hg19::chr2:21234502..21234510,-#_58249c8d7ebb9da5824d8da39aa8e680p43@APOB
1.2e-23FFCP PHASE2:Hg19::chr2:21256369..21256378,-#_58249c8d7ebb9da5824d8da39aa8e680p@chr2:21256369..21256378, -
1.2e-23FFCP PHASE2:Hg19::chr12:57828432..57828442,+#_58249c8d7ebb9da5824d8da39aa8e680p7@INHBC
2.14e-23FFCP PHASE2:Mm9::chr16:45986558..45986587,-#_9b5e68aec0f450f1bc97ae4bc2418aacp@chr16:45986558..45986587, -
2.14e-23FFCP PHASE1:Mm9::chr16:45986558..45986587,-#_9b5e68aec0f450f1bc97ae4bc2418aacp@chr16:45986558..45986587, -
3.56e-23FFCP PHASE1:Hg19::chr18:60206744..60206765,+#_234f3180b556cc9a0eb0c3b0e4ced5cdp6@ZCCHC2
3.56e-23FFCP PHASE2:Hg19::chr18:60206744..60206765,+#_234f3180b556cc9a0eb0c3b0e4ced5cdp6@ZCCHC2
3.65e-23FFCP PHASE1:Hg19::chr1:161192149..161192162,-#_099820ead1436e9f951b57529a5b257ep@chr1:161192149..161192162, -
3.65e-23FFCP PHASE2:Hg19::chr1:161192149..161192162,-#_099820ead1436e9f951b57529a5b257ep@chr1:161192149..161192162, -
4.02e-23FFCP PHASE1:Hg19::chr10:101841398..101841415,-#_88ba25e4cf9cf636cb1c256686588df5p2@CPN1
4.02e-23FFCP PHASE2:Hg19::chr10:101841398..101841415,-#_88ba25e4cf9cf636cb1c256686588df5p2@CPN1
4.12e-23FFCP PHASE1:Hg19::chr17:6593378..6593379,-#_9d8549817f11eecadde25469febc51e6-, p@chr17:6593378..6593379
4.12e-23FFCP PHASE2:Hg19::chr17:6593378..6593379,-#_9d8549817f11eecadde25469febc51e6p@chr17:6593378..6593379, -
4.22e-23FFCP PHASE2:Hg19::chr10:101841588..101841632,-#_0f25354f914ee320682604b2c16ab471p1@CPN1
4.22e-23FFCP PHASE1:Hg19::chr10:101841588..101841632,-#_0f25354f914ee320682604b2c16ab471p1@CPN1
6.51e-23FFCP PHASE1:Hg19::chr22:37505474..37505478,-#_4461b32c0679fc56eca59be730f16fd9p3@TMPRSS6
6.51e-23FFCP PHASE2:Hg19::chr22:37505474..37505478,-#_4461b32c0679fc56eca59be730f16fd9p3@TMPRSS6
1.0e-22FFCP PHASE1:Hg19::chr3:47484661..47484686,-#_71e0a83eef97bd4e0b795078d0ee8af4p4@SCAP
1.0e-22FFCP PHASE2:Hg19::chr3:47484661..47484686,-#_71e0a83eef97bd4e0b795078d0ee8af4p4@SCAP
1.79e-22FFCP PHASE2:Hg19::chr13:44980101..44980132,-#_142473fab618578f24429789174713b2p1@uc001uzl.2
1.79e-22FFCP PHASE1:Hg19::chr13:44980101..44980132,-#_142473fab618578f24429789174713b2p1@uc001uzl.2
1.81e-22FFCP PHASE2:Mm9::chr6:41483037..41483046,+#_07d745eb379a869ec12534f6760629a7p8@uc009bpa.1
1.81e-22FFCP PHASE1:Mm9::chr8:131012371..131012382,-#_07d745eb379a869ec12534f6760629a7p2@uc009nzu.1
1.81e-22FFCP PHASE2:Mm9::chr8:131012371..131012382,-#_07d745eb379a869ec12534f6760629a7p2@uc009nzu.1
1.81e-22FFCP PHASE1:Mm9::chr6:41483037..41483046,+#_07d745eb379a869ec12534f6760629a7p8@uc009bpa.1
2.51e-22FFCP PHASE1:Mm9::chr7:121912281..121912295,+#_859926659753f6dd9f4b90775dd33308p6@Insc
2.51e-22FFCP PHASE2:Mm9::chr7:121912281..121912295,+#_859926659753f6dd9f4b90775dd33308p6@Insc
2.66e-22FFCP PHASE1:Mm9::chr5:90897694..90897705,+#_5954f1dff8c517119e2ec3862c8bbe28p@chr5:90897694..90897705, +
2.66e-22FFCP PHASE2:Mm9::chr5:90897694..90897705,+#_5954f1dff8c517119e2ec3862c8bbe28p@chr5:90897694..90897705, +
2.8e-22FFCP PHASE1:Mm9::chr4:137275159..137275168,+#_d1fbd1cecd78929405d2c22feeadd477p@chr4:137275159..137275168, +
2.8e-22FFCP PHASE2:Mm9::chr4:137275159..137275168,+#_d1fbd1cecd78929405d2c22feeadd477p@chr4:137275159..137275168, +
2.8e-22FFCP PHASE2:Mm9::chr6:41483113..41483131,+#_d1fbd1cecd78929405d2c22feeadd477p4@uc009bpa.1
2.8e-22FFCP PHASE1:Mm9::chr6:41483113..41483131,+#_d1fbd1cecd78929405d2c22feeadd477p4@uc009bpa.1
3.24e-22FFCP PHASE2:Mm9::chr19:25169885..25169900,+#_5f52a197801376908fc062e4b60d8b96p@chr19:25169885..25169900, +
3.24e-22FFCP PHASE1:Mm9::chr19:25169885..25169900,+#_5f52a197801376908fc062e4b60d8b96p@chr19:25169885..25169900, +
3.73e-22FFCP PHASE1:Hg19::chr17:7082560..7082572,-#_9b7333117ba8229eda08eca82be24378p4@ASGR1
3.73e-22FFCP PHASE2:Hg19::chr17:7082560..7082572,-#_9b7333117ba8229eda08eca82be24378p4@ASGR1
3.93e-22FFCP PHASE1:Hg19::chr10:72083665..72083701,-#_4157f72644e937d4062cb68004f9aa4ap2@LRRC20
3.93e-22FFCP PHASE2:Hg19::chr10:72083665..72083701,-#_4157f72644e937d4062cb68004f9aa4ap2@LRRC20
3.98e-22FFCP PHASE1:Mm9::chr3:151770161..151770165,-#_970fd2984144cd43016b2ee8b113b2f4p3@Gipc2
3.98e-22FFCP PHASE2:Mm9::chr3:151770161..151770165,-#_970fd2984144cd43016b2ee8b113b2f4p3@Gipc2
4.58e-22FFCP PHASE2:Hg19::chr9:116838918..116838930,-#_b0610d8dd1ab3f39b7b45f129f8cb928p@chr9:116838918..116838930, -
4.58e-22FFCP PHASE1:Hg19::chr1:11107289..11107304,-#_b0610d8dd1ab3f39b7b45f129f8cb928p1@MASP2