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UBERON:0002757

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Name:regional part of epithalamus
Namespace:FANTOM
Definition:"A regional part of brain that is part of a epithalamus [Obol]." [OBOL:automatic]
Xrefs:
links:

FMA:62013

NIF_GrossAnatomy:birnlex_1607
Synonyms: "anatomical structure of brain of epithalamus" EXACT [OBOL:automatic]
"biological structure of brain of epithalamus" EXACT [OBOL:automatic]
"brain anatomical structure of epithalamus" EXACT [OBOL:automatic]
"brain biological structure of epithalamus" EXACT [OBOL:automatic]
"epithalamus anatomical structure of brain" EXACT [OBOL:automatic]
"epithalamus biological structure of brain" EXACT [OBOL:automatic]
"epithalamus brain anatomical structure" EXACT [OBOL:automatic]
"epithalamus brain biological structure" EXACT [OBOL:automatic]
"epithalamus neuraxis segment" EXACT [OBOL:automatic]
"epithalamus regional part of brain" EXACT [OBOL:automatic]
"epithalamus segment" EXACT [FMA:62013]
"epithalamus segment of brain" EXACT [OBOL:automatic]
"neuraxis segment of epithalamus" EXACT [OBOL:automatic]
"regional part of brain of epithalamus" EXACT [OBOL:automatic]
"segment of brain of epithalamus" EXACT [OBOL:automatic]
"segment of epithalamus" EXACT [NIF_GrossAnatomy:birnlex_1607]
Alt_id: UBERON:NIF_GrossAnatomy_birnlex_1607-FMA_62013

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0002784(regional part of diencephalon)
part_of:UBERON:0001899(epithalamus)



Children

is a:UBERON:0001905 (pineal body)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002757 (regional part of epithalamus), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
3.29e-195FFCP PHASE1:Hg19::chr9:92310419..92310432,+#_9fff67266e304a13f2133c4d8e21ddbep@chr9:92310419..92310432, +
3.29e-195FFCP PHASE2:Hg19::chr2:4224059..4224062,-#_9fff67266e304a13f2133c4d8e21ddbep@chr2:4224059..4224062, -
3.29e-195FFCP PHASE1:Hg19::chr1:99860883..99860921,-#_9fff67266e304a13f2133c4d8e21ddbep@chr1:99860883..99860921, -
3.29e-195FFCP PHASE1:Hg19::chr10:80984180..80984190,-#_9fff67266e304a13f2133c4d8e21ddbep@chr10:80984180..80984190, -
3.29e-195FFCP PHASE1:Hg19::chr11:18041244..18041266,-#_9fff67266e304a13f2133c4d8e21ddbe-, p@chr11:18041244..18041266
3.29e-195FFCP PHASE1:Hg19::chr12:99734965..99734976,-#_9fff67266e304a13f2133c4d8e21ddbep@chr12:99734965..99734976, -
3.29e-195FFCP PHASE2:Hg19::chr18:56963107..56963117,-#_9fff67266e304a13f2133c4d8e21ddbep@chr18:56963107..56963117, -
3.29e-195FFCP PHASE1:Hg19::chr11:72297717..72297725,-#_9fff67266e304a13f2133c4d8e21ddbep@chr11:72297717..72297725, -
3.29e-195FFCP PHASE2:Hg19::chr8:135504405..135504410,-#_9fff67266e304a13f2133c4d8e21ddbep@chr8:135504405..135504410, -
3.29e-195FFCP PHASE1:Hg19::chr7:9178350..9178369,-#_9fff67266e304a13f2133c4d8e21ddbep@chr7:9178350..9178369, -
3.29e-195FFCP PHASE2:Hg19::chr1:99860753..99860764,-#_9fff67266e304a13f2133c4d8e21ddbep@chr1:99860753..99860764, -
3.29e-195FFCP PHASE2:Hg19::chr3:100942376..100942381,-#_9fff67266e304a13f2133c4d8e21ddbep@chr3:100942376..100942381, -
3.29e-195FFCP PHASE1:Hg19::chrX:33146501..33146521,-#_9fff67266e304a13f2133c4d8e21ddbep32@DMD
3.29e-195FFCP PHASE2:Hg19::chr17:74463567..74463574,+#_9fff67266e304a13f2133c4d8e21ddbep4@AANAT
3.29e-195FFCP PHASE1:Hg19::chr7:129084265..129084288,-#_9fff67266e304a13f2133c4d8e21ddbep@chr7:129084265..129084288, -
3.29e-195FFCP PHASE1:Hg19::chr7:9782610..9782613,+#_9fff67266e304a13f2133c4d8e21ddbep@chr7:9782610..9782613, +
3.29e-195FFCP PHASE2:Hg19::chr1:45782001..45782009,+#_9fff67266e304a13f2133c4d8e21ddbep@chr1:45782001..45782009, +
3.29e-195FFCP PHASE1:Hg19::chr12:49621658..49621666,+#_9fff67266e304a13f2133c4d8e21ddbep21@TUBA1C
3.29e-195FFCP PHASE1:Hg19::chr1:45782001..45782009,+#_9fff67266e304a13f2133c4d8e21ddbep@chr1:45782001..45782009, +
3.29e-195FFCP PHASE2:Hg19::chr13:52650530..52650533,-#_9fff67266e304a13f2133c4d8e21ddbep@chr13:52650530..52650533, -
3.29e-195FFCP PHASE2:Hg19::chr2:17075761..17075773,+#_9fff67266e304a13f2133c4d8e21ddbep@chr2:17075761..17075773, +
3.29e-195FFCP PHASE1:Hg19::chr14:57197193..57197194,-#_9fff67266e304a13f2133c4d8e21ddbep1@ENST00000554597
3.29e-195FFCP PHASE2:Hg19::chr8:99033417..99033423,+#_9fff67266e304a13f2133c4d8e21ddbep17@MATN2
3.29e-195FFCP PHASE1:Hg19::chr8:135472861..135472868,-#_9fff67266e304a13f2133c4d8e21ddbep@chr8:135472861..135472868, -
3.29e-195FFCP PHASE2:Hg19::chr11:18040537..18040547,-#_9fff67266e304a13f2133c4d8e21ddbep@chr11:18040537..18040547, -
3.29e-195FFCP PHASE2:Hg19::chr15:55470964..55470974,-#_9fff67266e304a13f2133c4d8e21ddbep@chr15:55470964..55470974, -
3.29e-195FFCP PHASE1:Hg19::chr2:108616342..108616384,+#_9fff67266e304a13f2133c4d8e21ddbep@chr2:108616342..108616384, +
3.29e-195FFCP PHASE2:Hg19::chrX:146290937..146290942,+#_9fff67266e304a13f2133c4d8e21ddbep@chrX:146290937..146290942, +
3.29e-195FFCP PHASE2:Hg19::chr6:158734173..158734183,+#_9fff67266e304a13f2133c4d8e21ddbep7@TULP4
3.29e-195FFCP PHASE1:Hg19::chr12:6954834..6954841,+#_9fff67266e304a13f2133c4d8e21ddbep9@GNB3
3.29e-195FFCP PHASE1:Hg19::chr8:116127086..116127103,+#_9fff67266e304a13f2133c4d8e21ddbep@chr8:116127086..116127103, +
3.29e-195FFCP PHASE2:Hg19::chr3:54952412..54952416,-#_9fff67266e304a13f2133c4d8e21ddbep@chr3:54952412..54952416, -
3.29e-195FFCP PHASE2:Hg19::chr12:81859007..81859036,+#_9fff67266e304a13f2133c4d8e21ddbep@chr12:81859007..81859036, +
3.29e-195FFCP PHASE1:Hg19::chr11:18067904..18067908,-#_9fff67266e304a13f2133c4d8e21ddbep@chr11:18067904..18067908, -
3.29e-195FFCP PHASE2:Hg19::chr12:49621658..49621666,+#_9fff67266e304a13f2133c4d8e21ddbep21@TUBA1C
3.29e-195FFCP PHASE2:Hg19::chr9:37668094..37668097,+#_9fff67266e304a13f2133c4d8e21ddbep6@FRMPD1
3.29e-195FFCP PHASE2:Hg19::chr2:17040158..17040170,+#_9fff67266e304a13f2133c4d8e21ddbep@chr2:17040158..17040170, +
3.29e-195FFCP PHASE1:Hg19::chr4:20985967..20985972,-#_9fff67266e304a13f2133c4d8e21ddbep28@KCNIP4
3.29e-195FFCP PHASE1:Hg19::chr12:56582028..56582062,+#_9fff67266e304a13f2133c4d8e21ddbep@chr12:56582028..56582062, +
3.29e-195FFCP PHASE1:Hg19::chr1:154540028..154540037,+#_9fff67266e304a13f2133c4d8e21ddbep4@CHRNB2
3.29e-195FFCP PHASE2:Hg19::chr2:17185712..17185735,+#_9fff67266e304a13f2133c4d8e21ddbep@chr2:17185712..17185735, +
3.29e-195FFCP PHASE1:Hg19::chr2:17065916..17065929,+#_9fff67266e304a13f2133c4d8e21ddbep@chr2:17065916..17065929, +
3.29e-195FFCP PHASE1:Hg19::chr9:137539895..137539904,+#_9fff67266e304a13f2133c4d8e21ddbep@chr9:137539895..137539904, +
3.29e-195FFCP PHASE2:Hg19::chr10:18580269..18580290,+#_9fff67266e304a13f2133c4d8e21ddbep@chr10:18580269..18580290, +
3.29e-195FFCP PHASE2:Hg19::chr4:20985967..20985972,-#_9fff67266e304a13f2133c4d8e21ddbep28@KCNIP4
3.29e-195FFCP PHASE1:Hg19::chr9:25264978..25265001,+#_9fff67266e304a13f2133c4d8e21ddbep@chr9:25264978..25265001, +
3.29e-195FFCP PHASE2:Hg19::chr14:49512240..49512248,-#_9fff67266e304a13f2133c4d8e21ddbe-, p@chr14:49512240..49512248
3.29e-195FFCP PHASE2:Hg19::chr8:135520309..135520324,-#_9fff67266e304a13f2133c4d8e21ddbep@chr8:135520309..135520324, -
3.29e-195FFCP PHASE1:Hg19::chr7:9186866..9186885,-#_9fff67266e304a13f2133c4d8e21ddbe-, p@chr7:9186866..9186885
3.29e-195FFCP PHASE2:Hg19::chr3:101038595..101038604,-#_9fff67266e304a13f2133c4d8e21ddbep@chr3:101038595..101038604, -
3.29e-195FFCP PHASE2:Hg19::chr5:135732675..135732680,-#_9fff67266e304a13f2133c4d8e21ddbep3@ENST00000514282
3.29e-195FFCP PHASE2:Hg19::chr13:68306577..68306607,+#_9fff67266e304a13f2133c4d8e21ddbep@chr13:68306577..68306607, +
3.29e-195FFCP PHASE2:Hg19::chr12:56582028..56582062,+#_9fff67266e304a13f2133c4d8e21ddbep@chr12:56582028..56582062, +
3.29e-195FFCP PHASE1:Hg19::chr5:7338484..7338504,-#_9fff67266e304a13f2133c4d8e21ddbep@chr5:7338484..7338504, -
3.29e-195FFCP PHASE2:Hg19::chr8:135472861..135472868,-#_9fff67266e304a13f2133c4d8e21ddbe-, p@chr8:135472861..135472868
3.29e-195FFCP PHASE1:Hg19::chr8:135515939..135515941,+#_9fff67266e304a13f2133c4d8e21ddbep@chr8:135515939..135515941, +
3.29e-195FFCP PHASE2:Hg19::chr5:134871183..134871197,-#_9fff67266e304a13f2133c4d8e21ddbep3@NEUROG1
3.29e-195FFCP PHASE1:Hg19::chr8:135473205..135473218,-#_9fff67266e304a13f2133c4d8e21ddbep@chr8:135473205..135473218, -
3.29e-195FFCP PHASE2:Hg19::chr11:18041244..18041266,-#_9fff67266e304a13f2133c4d8e21ddbep@chr11:18041244..18041266, -
3.29e-195FFCP PHASE2:Hg19::chr3:128170725..128170735,+#_9fff67266e304a13f2133c4d8e21ddbep@chr3:128170725..128170735, +
3.29e-195FFCP PHASE1:Hg19::chr18:56963093..56963105,-#_9fff67266e304a13f2133c4d8e21ddbep@chr18:56963093..56963105, -
3.29e-195FFCP PHASE2:Hg19::chr5:119868809..119868839,+#_9fff67266e304a13f2133c4d8e21ddbep@chr5:119868809..119868839, +
3.29e-195FFCP PHASE2:Hg19::chr1:57914395..57914398,+#_9fff67266e304a13f2133c4d8e21ddbep@chr1:57914395..57914398, +
3.29e-195FFCP PHASE1:Hg19::chr8:135474173..135474185,-#_9fff67266e304a13f2133c4d8e21ddbep@chr8:135474173..135474185, -
3.29e-195FFCP PHASE1:Hg19::chr5:134871183..134871197,-#_9fff67266e304a13f2133c4d8e21ddbep3@NEUROG1
3.29e-195FFCP PHASE2:Hg19::chr4:1188439..1188454,-#_9fff67266e304a13f2133c4d8e21ddbep@chr4:1188439..1188454, -
3.29e-195FFCP PHASE1:Hg19::chr2:216447404..216447411,-#_9fff67266e304a13f2133c4d8e21ddbep1@ENST00000457625
3.29e-195FFCP PHASE2:Hg19::chr13:21399081..21399087,+#_9fff67266e304a13f2133c4d8e21ddbep@chr13:21399081..21399087, +
3.29e-195FFCP PHASE1:Hg19::chr6:158734173..158734183,+#_9fff67266e304a13f2133c4d8e21ddbep7@TULP4
3.29e-195FFCP PHASE2:Hg19::chr2:17065916..17065929,+#_9fff67266e304a13f2133c4d8e21ddbep@chr2:17065916..17065929, +
3.29e-195FFCP PHASE1:Hg19::chr5:119867229..119867240,+#_9fff67266e304a13f2133c4d8e21ddbep9@PRR16
3.29e-195FFCP PHASE2:Hg19::chr2:108616342..108616384,+#_9fff67266e304a13f2133c4d8e21ddbep@chr2:108616342..108616384, +
3.29e-195FFCP PHASE1:Hg19::chr1:57914399..57914402,+#_9fff67266e304a13f2133c4d8e21ddbep@chr1:57914399..57914402, +
3.29e-195FFCP PHASE1:Hg19::chr8:87755821..87755822,-#_9fff67266e304a13f2133c4d8e21ddbep10@CNGB3
3.29e-195FFCP PHASE2:Hg19::chr1:204620238..204620253,+#_9fff67266e304a13f2133c4d8e21ddbep@chr1:204620238..204620253, +
3.29e-195FFCP PHASE1:Hg19::chr3:100942376..100942381,-#_9fff67266e304a13f2133c4d8e21ddbep@chr3:100942376..100942381, -
3.29e-195FFCP PHASE1:Hg19::chr11:18053180..18053192,-#_9fff67266e304a13f2133c4d8e21ddbep@chr11:18053180..18053192, -
3.29e-195FFCP PHASE1:Hg19::chr9:88661694..88661709,-#_9fff67266e304a13f2133c4d8e21ddbep@chr9:88661694..88661709, -
3.29e-195FFCP PHASE2:Hg19::chr2:216447425..216447432,-#_9fff67266e304a13f2133c4d8e21ddbep2@ENST00000457625
3.29e-195FFCP PHASE1:Hg19::chr12:55422565..55422604,+#_9fff67266e304a13f2133c4d8e21ddbep@chr12:55422565..55422604, +
3.29e-195FFCP PHASE1:Hg19::chr7:9194488..9194491,-#_9fff67266e304a13f2133c4d8e21ddbep@chr7:9194488..9194491, -
3.29e-195FFCP PHASE1:Hg19::chr17:74463567..74463574,+#_9fff67266e304a13f2133c4d8e21ddbep4@AANAT
3.29e-195FFCP PHASE2:Hg19::chr16:51808960..51808964,-#_9fff67266e304a13f2133c4d8e21ddbe-, p@chr16:51808960..51808964
3.29e-195FFCP PHASE2:Hg19::chr11:18067904..18067908,-#_9fff67266e304a13f2133c4d8e21ddbep@chr11:18067904..18067908, -
3.29e-195FFCP PHASE2:Hg19::chr8:87751918..87751928,-#_9fff67266e304a13f2133c4d8e21ddbep@chr8:87751918..87751928, -
3.29e-195FFCP PHASE2:Hg19::chr7:9194488..9194491,-#_9fff67266e304a13f2133c4d8e21ddbep@chr7:9194488..9194491, -
3.29e-195FFCP PHASE1:Hg19::chr16:51808960..51808964,-#_9fff67266e304a13f2133c4d8e21ddbep@chr16:51808960..51808964, -
3.29e-195FFCP PHASE2:Hg19::chr8:135473205..135473218,-#_9fff67266e304a13f2133c4d8e21ddbep@chr8:135473205..135473218, -
3.29e-195FFCP PHASE1:Hg19::chr8:135520309..135520324,-#_9fff67266e304a13f2133c4d8e21ddbep@chr8:135520309..135520324, -
3.29e-195FFCP PHASE2:Hg19::chr8:135515939..135515941,+#_9fff67266e304a13f2133c4d8e21ddbep@chr8:135515939..135515941, +
3.29e-195FFCP PHASE1:Hg19::chr15:55470964..55470974,-#_9fff67266e304a13f2133c4d8e21ddbep@chr15:55470964..55470974, -
3.29e-195FFCP PHASE2:Hg19::chr1:99860786..99860791,-#_9fff67266e304a13f2133c4d8e21ddbep@chr1:99860786..99860791, -
3.29e-195FFCP PHASE2:Hg19::chr3:100942645..100942655,-#_9fff67266e304a13f2133c4d8e21ddbep@chr3:100942645..100942655, -
3.29e-195FFCP PHASE1:Hg19::chrX:33146637..33146644,-#_9fff67266e304a13f2133c4d8e21ddbep35@DMD
3.29e-195FFCP PHASE2:Hg19::chr17:74463608..74463612,+#_9fff67266e304a13f2133c4d8e21ddbep5@AANAT
3.29e-195FFCP PHASE2:Hg19::chr3:139938385..139938390,+#_9fff67266e304a13f2133c4d8e21ddbep@chr3:139938385..139938390, +
3.29e-195FFCP PHASE1:Hg19::chr17:55484129..55484139,+#_9fff67266e304a13f2133c4d8e21ddbep@chr17:55484129..55484139, +
3.29e-195FFCP PHASE1:Hg19::chr8:135473472..135473477,-#_9fff67266e304a13f2133c4d8e21ddbep@chr8:135473472..135473477, -
3.29e-195FFCP PHASE1:Hg19::chr8:135504314..135504320,-#_9fff67266e304a13f2133c4d8e21ddbep@chr8:135504314..135504320, -
3.29e-195FFCP PHASE1:Hg19::chr16:18066392..18066397,-#_9fff67266e304a13f2133c4d8e21ddbep@chr16:18066392..18066397, -