Personal tools

UBERON:0003127

From FANTOM5_SSTAR

Jump to: navigation, search

Name:open tracheal system trachea
Definition:"A trachea composed of composed of spiracles, tracheae, and tracheoles [Wikipedia]. An open tracheal system is a respiratory system, a branched network of epithelial tubes that supplies oxygen to target tissues via spiracles. An example of this is found in Drosophila melanogaster." [GO:0007424, Wikipedia:Invertebrate_trachea]
Xrefs:
links:

FBbt:00005043
SPD:0000434

TADS:0000315
Synonyms: "invertebrate trachea" EXACT []
"trachea" BROAD SENSU [FBbt:00005043]
Comments:TODO check if is_a epithelium
Subset: uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0001005(respiratory airway)



Children NA

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003127 (open tracheal system trachea), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
3.29e-195FFCP PHASE2:Hg19::chr5:180017253..180017257,-#_38310d6b9312bacc82fd954284e7a35cp@chr5:180017253..180017257, -
3.29e-195FFCP PHASE1:Hg19::chr5:180017253..180017257,-#_38310d6b9312bacc82fd954284e7a35cp@chr5:180017253..180017257, -
4.61e-131FFCP PHASE1:Hg19::chr5:180017205..180017215,-#_80ee2a6d011379b97eb48f4b8920d8cdp@chr5:180017205..180017215, -
4.61e-131FFCP PHASE2:Hg19::chr5:180017205..180017215,-#_80ee2a6d011379b97eb48f4b8920d8cdp@chr5:180017205..180017215, -
8.99e-131FFCP PHASE2:Hg19::chr20:31611311..31611316,+#_a2161ed8f9b1c1c4b66a2332808191f1p11@BPIFB6
8.99e-131FFCP PHASE1:Hg19::chr20:31611311..31611316,+#_a2161ed8f9b1c1c4b66a2332808191f1p11@BPIFB6
1.75e-130FFCP PHASE2:Hg19::chr16:57200962..57200982,-#_decf0c1393aac404ade3a6451846a2b8p@chr16:57200962..57200982, -
1.75e-130FFCP PHASE2:Hg19::chr17:70023350..70023353,-#_decf0c1393aac404ade3a6451846a2b8p@chr17:70023350..70023353, -
1.75e-130FFCP PHASE1:Hg19::chr17:70023350..70023353,-#_decf0c1393aac404ade3a6451846a2b8p@chr17:70023350..70023353, -
1.75e-130FFCP PHASE1:Hg19::chr16:57200962..57200982,-#_decf0c1393aac404ade3a6451846a2b8p@chr16:57200962..57200982, -
1.75e-130FFCP PHASE1:Hg19::chr10:23721618..23721620,+#_decf0c1393aac404ade3a6451846a2b8p@chr10:23721618..23721620, +
1.75e-130FFCP PHASE2:Hg19::chr10:23721618..23721620,+#_decf0c1393aac404ade3a6451846a2b8p@chr10:23721618..23721620, +
5.68e-99FFCP PHASE2:Hg19::chr12:10998450..10998451,+#_1ecedc200b36459be30b8828a90e6cbbp@chr12:10998450..10998451, +
5.68e-99FFCP PHASE1:Hg19::chr12:10998450..10998451,+#_1ecedc200b36459be30b8828a90e6cbbp@chr12:10998450..10998451, +
9.38e-99FFCP PHASE1:Hg19::chr16:83837409..83837435,-#_9764793f260f22922721a357cf10e23ap@chr16:83837409..83837435, -
9.38e-99FFCP PHASE2:Hg19::chr16:83837409..83837435,-#_9764793f260f22922721a357cf10e23ap@chr16:83837409..83837435, -
1.55e-98FFCP PHASE2:Hg19::chr20:31889078..31889083,+#_e9ebe19e72782050c5f89e354a3bf796p@chr20:31889078..31889083, +
1.55e-98FFCP PHASE1:Hg19::chr20:31823292..31823295,+#_e9ebe19e72782050c5f89e354a3bf796p@chr20:31823292..31823295, +
1.55e-98FFCP PHASE2:Hg19::chr4:16125001..16125013,-#_e9ebe19e72782050c5f89e354a3bf796p@chr4:16125001..16125013, -
1.55e-98FFCP PHASE1:Hg19::chr14:78021251..78021260,-#_e9ebe19e72782050c5f89e354a3bf796p8@SPTLC2
1.55e-98FFCP PHASE2:Hg19::chr14:29082860..29082866,-#_e9ebe19e72782050c5f89e354a3bf796p2@ENST00000549742
1.55e-98FFCP PHASE2:Hg19::chr12:55137687..55137694,+#_e9ebe19e72782050c5f89e354a3bf796p@chr12:55137687..55137694, +
1.55e-98FFCP PHASE2:Hg19::chr13:36191669..36191680,+#_e9ebe19e72782050c5f89e354a3bf796p@chr13:36191669..36191680, +
1.55e-98FFCP PHASE1:Hg19::chr4:48422304..48422310,+#_e9ebe19e72782050c5f89e354a3bf796p@chr4:48422304..48422310, +
1.55e-98FFCP PHASE1:Hg19::chr20:31873942..31873945,+#_e9ebe19e72782050c5f89e354a3bf796p16@BPIFB1
1.55e-98FFCP PHASE1:Hg19::chr11:1276056..1276069,+#_e9ebe19e72782050c5f89e354a3bf796p@chr11:1276056..1276069, +
1.55e-98FFCP PHASE2:Hg19::chr20:31823292..31823295,+#_e9ebe19e72782050c5f89e354a3bf796p@chr20:31823292..31823295, +
1.55e-98FFCP PHASE1:Hg19::chr13:36191669..36191680,+#_e9ebe19e72782050c5f89e354a3bf796p@chr13:36191669..36191680, +
1.55e-98FFCP PHASE2:Hg19::chr11:1247457..1247468,+#_e9ebe19e72782050c5f89e354a3bf796p@chr11:1247457..1247468, +
1.55e-98FFCP PHASE1:Hg19::chr20:58533512..58533522,+#_e9ebe19e72782050c5f89e354a3bf796p6@CDH26
1.55e-98FFCP PHASE2:Hg19::chr5:180017106..180017107,+#_e9ebe19e72782050c5f89e354a3bf796p@chr5:180017106..180017107, +
1.55e-98FFCP PHASE1:Hg19::chr15:82555201..82555210,+#_e9ebe19e72782050c5f89e354a3bf796p5@FAM154B
1.55e-98FFCP PHASE2:Hg19::chr9:35563541..35563550,-#_e9ebe19e72782050c5f89e354a3bf796p5@FAM166B
1.55e-98FFCP PHASE2:Hg19::chr1:182286732..182286752,-#_e9ebe19e72782050c5f89e354a3bf796p@chr1:182286732..182286752, -
1.55e-98FFCP PHASE2:Hg19::chr3:112521387..112521398,+#_e9ebe19e72782050c5f89e354a3bf796p2@ENST00000519700
1.55e-98FFCP PHASE2:Hg19::chr15:82555201..82555210,+#_e9ebe19e72782050c5f89e354a3bf796p5@FAM154B
1.55e-98FFCP PHASE2:Hg19::chr12:55137725..55137730,+#_e9ebe19e72782050c5f89e354a3bf796p@chr12:55137725..55137730, +
1.55e-98FFCP PHASE1:Hg19::chr9:35563541..35563550,-#_e9ebe19e72782050c5f89e354a3bf796p5@FAM166B
1.55e-98FFCP PHASE1:Hg19::chr3:112521387..112521398,+#_e9ebe19e72782050c5f89e354a3bf796p2@ENST00000519700
1.55e-98FFCP PHASE2:Hg19::chr20:31873942..31873945,+#_e9ebe19e72782050c5f89e354a3bf796p16@BPIFB1
1.55e-98FFCP PHASE1:Hg19::chr1:182286732..182286752,-#_e9ebe19e72782050c5f89e354a3bf796p@chr1:182286732..182286752, -
1.55e-98FFCP PHASE2:Hg19::chr11:1276056..1276069,+#_e9ebe19e72782050c5f89e354a3bf796+, p@chr11:1276056..1276069
1.55e-98FFCP PHASE2:Hg19::chr9:79302945..79302964,-#_e9ebe19e72782050c5f89e354a3bf796p@chr9:79302945..79302964, -
1.55e-98FFCP PHASE2:Hg19::chr1:168808636..168808640,+#_e9ebe19e72782050c5f89e354a3bf796+, p@chr1:168808636..168808640
1.55e-98FFCP PHASE2:Hg19::chr14:78021251..78021260,-#_e9ebe19e72782050c5f89e354a3bf796p8@SPTLC2
1.55e-98FFCP PHASE1:Hg19::chr6:3378254..3378263,-#_e9ebe19e72782050c5f89e354a3bf796p27@SLC22A23
1.55e-98FFCP PHASE2:Hg19::chr6:47708489..47708493,-#_e9ebe19e72782050c5f89e354a3bf796p1@ENST00000446733
1.55e-98FFCP PHASE2:Hg19::chr5:61897065..61897090,+#_e9ebe19e72782050c5f89e354a3bf796p9@IPO11
1.55e-98FFCP PHASE1:Hg19::chr6:47708489..47708493,-#_e9ebe19e72782050c5f89e354a3bf796p1@ENST00000446733
1.55e-98FFCP PHASE1:Hg19::chr12:55137687..55137694,+#_e9ebe19e72782050c5f89e354a3bf796p@chr12:55137687..55137694, +
1.55e-98FFCP PHASE2:Hg19::chr18:36308334..36308341,-#_e9ebe19e72782050c5f89e354a3bf796p@chr18:36308334..36308341, -
1.55e-98FFCP PHASE1:Hg19::chr5:180017106..180017107,+#_e9ebe19e72782050c5f89e354a3bf796p@chr5:180017106..180017107, +
1.55e-98FFCP PHASE1:Hg19::chr5:61897065..61897090,+#_e9ebe19e72782050c5f89e354a3bf796p9@IPO11
1.55e-98FFCP PHASE2:Hg19::chr4:48422304..48422310,+#_e9ebe19e72782050c5f89e354a3bf796p@chr4:48422304..48422310, +
1.55e-98FFCP PHASE2:Hg19::chr20:58533512..58533522,+#_e9ebe19e72782050c5f89e354a3bf796p6@CDH26
1.55e-98FFCP PHASE1:Hg19::chr14:29082860..29082866,-#_e9ebe19e72782050c5f89e354a3bf796p2@ENST00000549742
1.55e-98FFCP PHASE1:Hg19::chr9:79302945..79302964,-#_e9ebe19e72782050c5f89e354a3bf796p@chr9:79302945..79302964, -
1.55e-98FFCP PHASE1:Hg19::chr4:16125001..16125013,-#_e9ebe19e72782050c5f89e354a3bf796p@chr4:16125001..16125013, -
1.55e-98FFCP PHASE1:Hg19::chr20:31889078..31889083,+#_e9ebe19e72782050c5f89e354a3bf796p@chr20:31889078..31889083, +
1.55e-98FFCP PHASE2:Hg19::chr20:56562819..56562826,-#_e9ebe19e72782050c5f89e354a3bf796-, p@chr20:56562819..56562826
1.55e-98FFCP PHASE1:Hg19::chr18:36308334..36308341,-#_e9ebe19e72782050c5f89e354a3bf796p@chr18:36308334..36308341, -
1.55e-98FFCP PHASE1:Hg19::chr1:168808636..168808640,+#_e9ebe19e72782050c5f89e354a3bf796p@chr1:168808636..168808640, +
1.55e-98FFCP PHASE1:Hg19::chr11:1247457..1247468,+#_e9ebe19e72782050c5f89e354a3bf796p@chr11:1247457..1247468, +
1.55e-98FFCP PHASE1:Hg19::chr12:55137725..55137730,+#_e9ebe19e72782050c5f89e354a3bf796p@chr12:55137725..55137730, +
1.55e-98FFCP PHASE2:Hg19::chr6:3378254..3378263,-#_e9ebe19e72782050c5f89e354a3bf796p27@SLC22A23
1.55e-98FFCP PHASE1:Hg19::chr20:56562819..56562826,-#_e9ebe19e72782050c5f89e354a3bf796p@chr20:56562819..56562826, -
2.56e-98FFCP PHASE1:Hg19::chr11:1251248..1251255,+#_7b72acb4ad152b18e278e54cc5f13906p@chr11:1251248..1251255, +
2.56e-98FFCP PHASE2:Hg19::chr11:1251248..1251255,+#_7b72acb4ad152b18e278e54cc5f13906p@chr11:1251248..1251255, +
1.05e-79FFCP PHASE1:Hg19::chr2:180524914..180524925,-#_d315f5baae6d1cf3f12f0b95bd2ce01cp17@ZNF385B
1.05e-79FFCP PHASE2:Hg19::chr5:180017672..180017683,-#_d315f5baae6d1cf3f12f0b95bd2ce01cp11@SCGB3A1
1.05e-79FFCP PHASE2:Hg19::chr2:180524914..180524925,-#_d315f5baae6d1cf3f12f0b95bd2ce01cp17@ZNF385B
1.05e-79FFCP PHASE1:Hg19::chr5:180017672..180017683,-#_d315f5baae6d1cf3f12f0b95bd2ce01cp11@SCGB3A1
2.34e-79FFCP PHASE2:Hg19::chr20:31897630..31897644,+#_d4b3074754dd0a9a2fedfa16f5f61979p@chr20:31897630..31897644, +
2.34e-79FFCP PHASE1:Hg19::chr6:10691162..10691202,+#_d4b3074754dd0a9a2fedfa16f5f61979p@chr6:10691162..10691202, +
2.34e-79FFCP PHASE1:Hg19::chr20:44171301..44171317,-#_d4b3074754dd0a9a2fedfa16f5f61979p@chr20:44171301..44171317, -
2.34e-79FFCP PHASE2:Hg19::chr6:139135648..139135664,+#_d4b3074754dd0a9a2fedfa16f5f61979p3@ECT2L
2.34e-79FFCP PHASE2:Hg19::chr6:10691162..10691202,+#_d4b3074754dd0a9a2fedfa16f5f61979p@chr6:10691162..10691202, +
2.34e-79FFCP PHASE1:Hg19::chr20:31887696..31887715,+#_d4b3074754dd0a9a2fedfa16f5f61979p@chr20:31887696..31887715, +
2.34e-79FFCP PHASE2:Hg19::chr20:44171301..44171317,-#_d4b3074754dd0a9a2fedfa16f5f61979p@chr20:44171301..44171317, -
2.34e-79FFCP PHASE1:Hg19::chr6:139135648..139135664,+#_d4b3074754dd0a9a2fedfa16f5f61979p3@ECT2L
2.34e-79FFCP PHASE1:Hg19::chr14:29082844..29082855,-#_d4b3074754dd0a9a2fedfa16f5f61979p1@ENST00000549742
2.34e-79FFCP PHASE2:Hg19::chr20:31887696..31887715,+#_d4b3074754dd0a9a2fedfa16f5f61979p@chr20:31887696..31887715, +
2.34e-79FFCP PHASE1:Hg19::chr3:182983174..182983185,+#_d4b3074754dd0a9a2fedfa16f5f61979p30@B3GNT5
2.34e-79FFCP PHASE2:Hg19::chr3:182983174..182983185,+#_d4b3074754dd0a9a2fedfa16f5f61979p30@B3GNT5
2.34e-79FFCP PHASE2:Hg19::chr14:29082844..29082855,-#_d4b3074754dd0a9a2fedfa16f5f61979p1@ENST00000549742
2.34e-79FFCP PHASE1:Hg19::chr20:31897630..31897644,+#_d4b3074754dd0a9a2fedfa16f5f61979p@chr20:31897630..31897644, +
3.49e-79FFCP PHASE1:Hg19::chr11:1249793..1249803,+#_be52b93cc82e70608fa5746610f4208fp25@MUC5B
3.49e-79FFCP PHASE2:Hg19::chr11:1249793..1249803,+#_be52b93cc82e70608fa5746610f4208fp25@MUC5B
7.41e-67FFCP PHASE1:Hg19::chr20:44171371..44171387,-#_fc6b1634d0d7b19ab213fe1064185f05p@chr20:44171371..44171387, -
7.41e-67FFCP PHASE2:Hg19::chr20:44171371..44171387,-#_fc6b1634d0d7b19ab213fe1064185f05p@chr20:44171371..44171387, -
1.45e-66FFCP PHASE1:Hg19::chr7:31553698..31553709,+#_3d64abf089f35f6c405f77e74e44447dp2@CCDC129
1.45e-66FFCP PHASE2:Hg19::chr9:140331478..140331491,-#_3d64abf089f35f6c405f77e74e44447dp@chr9:140331478..140331491, -
1.45e-66FFCP PHASE2:Hg19::chr7:31553698..31553709,+#_3d64abf089f35f6c405f77e74e44447dp2@CCDC129
1.45e-66FFCP PHASE1:Hg19::chr9:140331478..140331491,-#_3d64abf089f35f6c405f77e74e44447dp@chr9:140331478..140331491, -
1.45e-66FFCP PHASE1:Hg19::chr18:24804022..24804043,+#_3d64abf089f35f6c405f77e74e44447dp@chr18:24804022..24804043, +
1.45e-66FFCP PHASE2:Hg19::chr11:1283125..1283153,+#_3d64abf089f35f6c405f77e74e44447dp@chr11:1283125..1283153, +
1.45e-66FFCP PHASE2:Hg19::chr18:24804022..24804043,+#_3d64abf089f35f6c405f77e74e44447d+, p@chr18:24804022..24804043
1.45e-66FFCP PHASE1:Hg19::chr11:1283125..1283153,+#_3d64abf089f35f6c405f77e74e44447dp@chr11:1283125..1283153, +
1.45e-66FFCP PHASE2:Hg19::chr9:140331458..140331471,-#_3d64abf089f35f6c405f77e74e44447dp@chr9:140331458..140331471, -
1.45e-66FFCP PHASE1:Hg19::chr9:140331458..140331471,-#_3d64abf089f35f6c405f77e74e44447dp@chr9:140331458..140331471, -